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diff test-data/hyopneumoniae_16S-flocculare_16S.txt @ 0:09459f6ffe08 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
author iuc
date Fri, 27 Nov 2020 14:46:27 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hyopneumoniae_16S-flocculare_16S.txt	Fri Nov 27 14:46:27 2020 +0000
@@ -0,0 +1,96 @@
+>Y00149.1 Mycoplasma hyopneumoniae 16S rRNA gene ALIGNED WITH >GU227405.1 Mycoplasma flocculare strain USP20N 16S ribosomal RNA gene, partial sequence LENGTH: 1224 IDENT: 1195 STRAND: f @(219, 193)
+X:	AAGCTTCACCAAGAAATGGGGGTGCGCAACATTAGTTAGTTGGTAGGGTAAAAGCCTACCAAGACGATGA
+	||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
+Y:	AAGCTCCACCAAAAAATGGGGGTGCGCAACATTAGTTAGTTGGTAGGGTAAAGGCCTACCAAGACGATGA
+
+X:	TGTTTAGCGGGGCCAAGAGGTTGTACCGCCACACTGGGATTGAGATACGGCCCAGACTCCTACGGGAGGC
+	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+Y:	TGTTTAGCGGGGCCAAGAGGTTGTACCGCCACACTGGGATTGAGATACGGCCCAGACTCCTACGGGAGGC
+
+X:	AGCAGTAAGGAATATTCCACAATAAGCGAAAGCTTGATGGAGCGACACAGCGTGCAGGATGAAGTCTTTC
+	||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| 
+Y:	AGCAGTAAGGAATATTCCACAATGAGCGAAAGCTTGATGGAGCGACACAGCGTGCAGGATGAAGTCTTTA
+
+X:	GGGATGTAAACTGCTGTTGTAAGGGAAGAAAAAACTAGATAGGAAATGCTCTAGTCTTGACGGTACCTTA
+	|| ||||||||||||||||||||||||||||||| ||| ||||||||| |||| ||||||||||||||||
+Y:	GGTATGTAAACTGCTGTTGTAAGGGAAGAAAAAATTAGGTAGGAAATGATCTAATCTTGACGGTACCTTA
+
+X:	TTAGAAAGCGACGGCAAACTATGTGCCAGCAGCCGCGGTAATACATAGGTCGCAAGCGTTATCCGGAATT
+	 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+Y:	CTAGAAAGCGACGGCAAACTATGTGCCAGCAGCCGCGGTAATACATAGGTCGCAAGCGTTATCCGGAATT
+
+X:	ATTGGGCGTAAAGCGTCCGTAGGTTTTTTGTTAAGTTTAAAGTTAAATGCTAAAGCTCAACTTTAGTCCG
+	|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
+Y:	ATTGGGCGTAAAGCGTTCGTAGGTTTTTTGTTAAGTTTAAGGTTAAATGCTAAAGCTCAACTTTAGTCCG
+
+X:	CTTTAGATACTGGCAAAATAGAATTATGAAGAGGTTAGCGGAATTCCTAGTGGAGTGGTGGAATACGTAG
+	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+Y:	CTTTAGATACTGGCAAAATAGAATTATGAAGAGGTTAGCGGAATTCCTAGTGGAGTGGTGGAATACGTAG
+
+X:	ATATTAGGAAGAACACCAATAGGCGAAGGCAGCTAACTGGTCATATATTGACACTAAGGGACGAAAGCGT
+	||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
+Y:	ATATTAGGAAGAACACCAATAGGCGAAGGCAGCTAACTGGTCATATATTGACACTGAGGGACGAAAGCGT
+
+X:	GGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATCATTAGTTGGTGGCAAAAG
+	 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
+Y:	CGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATCATTAGTTGGTGGCAGAAG
+
+X:	TCACTAACACAGCTAACGCGTTAAATGATCCGCCTGAGTAGTATGCTCGCAAGAGTGAAACTTAAAGGAA
+	|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+Y:	TCACTAGCGCAGCTAACGCGTTAAATGATCCGCCTGAGTAGTATGCTCGCAAGAGTGAAACTTAAAGGAA
+
+X:	TTGACGGGAACCCGCACAAGCGGTGGAGCATGTGGTTTAATTTGAAGATACGCGTAGAACCTTACCCACT
+	||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
+Y:	TTGACGGGAACCCGCACAAGCGGTGGAGCATGTGGTTTAATTTGATGATACGCGTAGAACCTTACCCACT
+
+X:	CTTGACATTCTCGCAAAACTATAGAGATATAGCCGAGGCTAACGAGATCACAGATGGTGCATGGTTGTCG
+	||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
+Y:	CTTGACATTCTCGCAAAACTATAGAGATATAGCGGAGGCTAACGAGATTACAGATGGTGCATGGTTGTCG
+
+X:	TCAGCTCGTGTCGTGAGATGTTAGGTTAAGTCCTGCAACGAGCGCAACCCTTTTCTTTAGTTGCTAACAT
+	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+Y:	TCAGCTCGTGTCGTGAGATGTTAGGTTAAGTCCTGCAACGAGCGCAACCCTTTTCTTTAGTTGCTAACAT
+
+X:	TTAGTTGAGAACCCTAAAGATACTGCCGGCGCAAGCCGGAGGAAGGTGGGGACGACGTCAAATCATCATG
+	| |||||||||||||| |||||||||||| | || ||||||||||||||||| |||||||||||||||||
+Y:	TAAGTTGAGAACCCTAGAGATACTGCCGGTGTAAACCGGAGGAAGGTGGGGATGACGTCAAATCATCATG
+
+X:	CCTCTTACGAGTGGGGCAACACACGTGCTACAATGGCTACTACAAAGAGCAGCAAAACAGTGATGTCAAG
+	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+Y:	CCTCTTACGAGTGGGGCAACACACGTGCTACAATGGCTACTACAAAGAGCAGCAAAACAGTGATGTCAAG
+
+X:	CTAATCTCAAAAAAGTAGTCTCAGTTCGGATTGAAGTCTGCAACTCGACTTCATGAAGTCGGAATCGCTA
+	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+Y:	CTAATCTCAAAAAAGTAGTCTCAGTTCGGATTGAAGTCTGCAACTCGACTTCATGAAGTCGGAATCGCTA
+
+X:	GTAATCGCAGGTCAGCTATACTGCGGTGAATACGTTCTCGGGTTTTGTACACACCGCCCGTCACACCATG
+	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+Y:	GTAATCGCAGGTCAGCTATACTGCGGTGAATACGTTCTCGGGTTTTGTACACACCGCCCGTCACACCATG
+
+X:	GGAGTTGGTAATGCCCAAAGTCGGTGAGTTAACT
+	||||||||||||||||||||||||||||| | ||
+Y:	GGAGTTGGTAATGCCCAAAGTCGGTGAGTAACCT
+
+
+>Y00149.1 Mycoplasma hyopneumoniae 16S rRNA gene ALIGNED WITH >GU227405.1 Mycoplasma flocculare strain USP20N 16S ribosomal RNA gene, partial sequence LENGTH: 121 IDENT: 113 STRAND: f @(94, 66)
+X:	TTTAGTAGCAAATGGGTGAGTAACACGTACCTAACCTACCTTTTGGACTGGGATAACCATTGGAAACAGT
+	|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
+Y:	TTTAGTAGCAAATGGGTGAGTAACACGTACCTAACCTACCTTTTGGACCGGGATAACCATTGGAAACAGT
+
+X:	GGCTAATACCAGATATGATAAAAATTTGCATGAATTTTTATTCAAAGGAGC
+	|||||||||| ||||| |||||||||   ||||||||||||  ||||||||
+Y:	GGCTAATACCGGATATCATAAAAATTCATATGAATTTTTATGAAAAGGAGC
+
+
+>Y00149.1 Mycoplasma hyopneumoniae 16S rRNA gene ALIGNED WITH >GU227405.1 Mycoplasma flocculare strain USP20N 16S ribosomal RNA gene, partial sequence LENGTH: 23 IDENT: 22 STRAND: f @(53, 17)
+X:	ATACATGCATGTTGAACGGAATA
+	||||||||||||||||||| |||
+Y:	ATACATGCATGTTGAACGGGATA
+
+
+>Y00149.1 Mycoplasma hyopneumoniae 16S rRNA gene ALIGNED WITH >GU227405.1 Mycoplasma flocculare strain USP20N 16S ribosomal RNA gene, partial sequence LENGTH: 24 IDENT: 21 STRAND: r @(181, 1271)
+X:	ATAAAAATTTGCATGAATTTTTAT
+	|||||||||   ||||||||||||
+Y:	ATAAAAATTCATATGAATTTTTAT
+
+