Mercurial > repos > iuc > gemini_fusions

diff gemini_fusions.xml @ 5:6e3d2bd01a96 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit 62ed732cba355e695181924a8ed4cce49ca21c59
author iuc
date Fri, 11 Jan 2019 17:42:53 -0500
parents b35fd707c586
children c00dcd1455a0
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--- a/gemini_fusions.xml	Fri Dec 14 12:46:37 2018 -0500
+++ b/gemini_fusions.xml	Fri Jan 11 17:42:53 2019 -0500
@@ -1,4 +1,4 @@
-<tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.1">
+<tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@">
     <description>Identify somatic fusion genes from a GEMINI database</description>
     <macros>
         <import>gemini_macros.xml</import>
@@ -23,8 +23,8 @@
             --evidence_type $evidence_type
         #end if 
         
-        "${ infile }" | tr -s ' ' '\t'
-        > "${ outfile }" 
+        '$infile' | tr -s ' ' '\t'
+        > '$outfile' 
 ]]>
     </command>
     <inputs>