Mercurial > repos > iuc > genebed_maf_to_fasta
changeset 1:020c78e91cc5 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/genebed_maf_to_fasta/ commit 95632be9aca24769ac192f2eb6a0454af21eff9e"
| author | iuc |
|---|---|
| date | Tue, 10 Nov 2020 18:48:11 +0000 |
| parents | f24a9ff28d3c |
| children | e25ee6bac872 |
| files | genebed_maf_to_fasta.xml macros.xml |
| diffstat | 2 files changed, 2 insertions(+), 4 deletions(-) [+] |
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--- a/genebed_maf_to_fasta.xml Fri Aug 21 15:10:13 2020 -0400 +++ b/genebed_maf_to_fasta.xml Tue Nov 10 18:48:11 2020 +0000 @@ -1,4 +1,4 @@ -<tool id="GeneBed_Maf_Fasta2" name="Stitch Gene blocks" version="1.0.1"> +<tool id="GeneBed_Maf_Fasta2" name="Stitch Gene blocks" version="1.0.1+galaxy0"> <description>given a set of coding exon intervals</description> <macros> <import>macros.xml</import>
--- a/macros.xml Fri Aug 21 15:10:13 2020 -0400 +++ b/macros.xml Tue Nov 10 18:48:11 2020 +0000 @@ -35,11 +35,9 @@ <column name="indexed_for" index="2"/> <column name="exists_in_maf" index="3" /> <column name="path" index="4" /> - <filter type="data_meta" ref="input1" key="dbkey" column="2" multiple="True" separator=","/> - <validator type="no_options" message="No alignments are available for the build associated with the selected interval file"/> </options> </param> - <param name="species" type="select" display="checkboxes" multiple="true" label="Choose species" help="Select species to be included in the final alignment"> + <param name="species" type="select" display="checkboxes" multiple="true" label="Choose species" help="Select species to be included in the final alignment. Results may not be easily predictable if the input species does not exist in the cached multi-alignment"> <options from_data_table="maf_indexes"> <column name="value" index="3"/> <filter type="multiple_splitter" column="3" separator=","/>