Mercurial > repos > iuc > hisat2

annotate test-data/hisat_input_1_interleaved.fastq @ 22:a26ed87f444c draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
author iuc
date Tue, 24 Jul 2018 09:29:27 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
22
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
1 @phiX174_1980_2501_0:1:0_3:0:0_0/1
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
2 TTAGGTGTGTGTAAAACAGGTGCCGAAGAAGCTGGATTAACAGAATTGAGAACCAGCTTATCAGAAAAAA
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
3 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
4 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
5 @phiX174_1980_2501_0:1:0_3:0:0_0/2
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
6 GTGAAATTTCTAGGAAGGATGTTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCA
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
7 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
8 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
9 @phiX174_1542_1965_0:0:0_0:0:0_1/1
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
10 CTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCA
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
11 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
12 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
13 @phiX174_1542_1965_0:0:0_0:0:0_1/2
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
14 CCATACAAAACAGGGTCGCCAGCAATATCGGTATAAGTCAAAGCACCTTTAGCGTTAAGGTACTGAATCT
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
15 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
16 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
17 @phiX174_2950_3377_0:0:0_2:0:0_2/1
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
18 CTCAAATCCGGCGTCAACCATACCAGCATAGGAAGCATCAGCACCAGCACGCTCCCAAGCATTAATCTCA
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
19 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
20 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
21 @phiX174_2950_3377_0:0:0_2:0:0_2/2
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
22 GCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAAAGCCGCCTC
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
23 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
24 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
25 @phiX174_2259_2739_1:0:0_1:0:0_3/1
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
26 CTCGCGATTCAATCATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAACGCCGAAGCGGTAAAAAAT
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
27 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
28 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
29 @phiX174_2259_2739_1:0:0_1:0:0_3/2
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
30 GCGACCATTCAAAGGATAAACATCATAGGCAGTCGGGAGGGTAGTCGGAACCGACGAAGACTCAAAGCGA
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
31 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
32 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
33 @phiX174_1141_1609_1:0:0_1:0:0_4/1
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
34 TGGCGCTCTCCGTCTTTCTCCATTTCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTT
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
35 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
36 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
37 @phiX174_1141_1609_1:0:0_1:0:0_4/2
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
38 CAAATTAGCATAAGCAGCTTGCAGACCCATAATGTCAATAGATGTGGTAGAAGTCGTCATTTGGCTAGAA
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
39 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
40 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
41 @phiX174_185_708_0:0:0_1:0:0_5/1
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
42 CCTTTCGCCATCAACTAACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCT
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
43 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
44 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
45 @phiX174_185_708_0:0:0_1:0:0_5/2
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
46 TGTTTTCCGTAAATTCAGCGCCTTCCATGATGCGACAGGCCGTTTGAATGTTGACGGGATGAACATAATA
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
47 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
48 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
49 @phiX174_1363_1914_3:0:0_0:0:0_6/1
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
50 GCGTTAAGGTACTGAATCTCTTTAGTCGCAGTAGGCGGAAAACGAACAAGCGCAAGAGTAAACATAGTGC
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
51 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
52 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
53 @phiX174_1363_1914_3:0:0_0:0:0_6/2
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
54 TAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTCAAGCGCCGAGGATGCGTGACCGT
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
55 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
56 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
57 @phiX174_3199_3732_0:0:0_1:0:0_7/1
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
58 CTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAA
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
59 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
60 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
61 @phiX174_3199_3732_0:0:0_1:0:0_7/2
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
62 TCTGCGTTTGCTGATGAACTAAGTCAACCTCAGCACTAACCTTGCGAGTCATTTCATTGATTTGGTCATT
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
63 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
64 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
65 @phiX174_36_572_1:0:0_0:0:0_8/1
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
66 ACCATAAACGCAAGCCTCAACGCAGCGACGAGCACGAGAGCGGTCAGTAGCAATCCAAACTTTGTTACTC
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
67 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
68 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
69 @phiX174_36_572_1:0:0_0:0:0_8/2
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
70 TTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGTAATTACTACTGCTTGTTTACGAAT
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
71 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
72 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
73 @phiX174_2128_2577_0:0:0_4:0:0_9/1
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
74 TTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCAG
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
75 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
76 2222222222222222222222222222222222222222222222222222222222222222222222
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
77 @phiX174_2128_2577_0:0:0_4:0:0_9/2
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
78 CTGAATGGAATTAAGAAAACCACCAATACCAGCATTAACCTTCAAACTATCAAAATATAACGTTGACGAT
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
79 +
a26ed87f444c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit ac79103bf57c195226877a698dc197a965f82aba
iuc
parents:
diff changeset
80 2222222222222222222222222222222222222222222222222222222222222222222222