Mercurial > repos > iuc > hmmer3

comparison macros.xml @ 1:b5066aa77fea draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit f7d83adb11624763b9b113f938a1d5f311c8f9fa-dirty
author iuc
date Sat, 19 Sep 2015 17:05:45 -0400
parents 62479bdcc059
children 54b6b4d0613a
comparison
equal deleted inserted replaced
0:62479bdcc059 1:b5066aa77fea
390 help="(--w_beta)" optional="True" type="float"/> 390 help="(--w_beta)" optional="True" type="float"/>
391 <param name="w_length" label="Window Length" 391 <param name="w_length" label="Window Length"
392 help="(--w_length)" optional="True" type="integer" /> 392 help="(--w_length)" optional="True" type="integer" />
393 </xml> 393 </xml>
394 <xml name="input_hmm"> 394 <xml name="input_hmm">
395 <param name="hmmfile" type="data" label="HMM model" format="hmmer2,hmmer3"/> 395 <param name="hmmfile" type="data" label="HMM model" format="hmm2,hmm3"/>
396 </xml> 396 </xml>
397 <xml name="input_msa"> 397 <xml name="input_msa">
398 <param name="msafile" type="data" label="MSA File" format="stockholm"/> 398 <param name="msafile" type="data" label="Multiple Sequence Alignment" format="stockholm,clustal,fasta"
399 help="in Stockholm, Clustal, or Fasta format. While this tool accepts fasta, please ensure that the sequences are not unaligned"/>
399 </xml> 400 </xml>
400 401
401 402
402 <token name="@ACCEL_HEUR_HELP@"><![CDATA[ 403 <token name="@ACCEL_HEUR_HELP@"><![CDATA[
403 Acceleration Heuristicts (--F1, --F2, --F3) 404 Acceleration Heuristicts (--F1, --F2, --F3)