diff nhmmer.xml @ 2:ae4754e7c97a draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit a1a31824fc24d5e652c263b998b7f2363cbd7610

--- a/nhmmer.xml	Mon Nov 14 15:11:53 2016 -0500
+++ b/nhmmer.xml	Wed Apr 04 14:01:13 2018 -0400
@@ -42,13 +42,13 @@
     <data format="txt" name="output" label="NHMMER search of $seqfile.name in $hmmfile.name"/>
 
     <data format="txt" name="tblout" label="Table of per-sequence hits from HMM matches of $seqfile.name in $hmmfile.name">
-      <filter>'tblout' in str(oformat)</filter>
+      <filter>oformat and 'tblout' in oformat</filter>
     </data>
     <data format="txt" name="dfamtblout" label="Table of per-sequence/per-domain hits from HMM matches of $seqfile.name in $hmmfile.name">
-      <filter>'pfamtblout' in str(oformat)</filter>
+      <filter>oformat and 'pfamtblout' in oformat</filter>
     </data>
     <data format="txt" name="aliscoresout" label="Scores for positional matches of $seqfile.name in $hmmfile.name">
-      <filter>'aliscoresout' in str(oformat)</filter>
+      <filter>oformat and 'aliscoresout' in oformat</filter>
     </data>
   </outputs>
   <tests>