diff test-data/nhmmer.out @ 7:b28e8ed99424 draft default tip

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 0bccf5220ed6549db7e053f85bbe917326b0a0be"
author iuc
date Wed, 21 Jul 2021 14:11:12 +0000
parents b4fe2f703b4b
children
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--- a/test-data/nhmmer.out	Thu Jan 14 15:42:52 2021 +0000
+++ b/test-data/nhmmer.out	Wed Jul 21 14:11:12 2021 +0000
@@ -1,20 +1,17 @@
 # nhmmer :: search a DNA model, alignment, or sequence against a DNA database
-# HMMER 3.3 (Nov 2019); http://hmmer.org/
-# Copyright (C) 2019 Howard Hughes Medical Institute.
+# HMMER 3.3.2 (Nov 2020); http://hmmer.org/
+# Copyright (C) 2020 Howard Hughes Medical Institute.
 # Freely distributed under the BSD open source license.
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-# query file:                      /tmp/tmpqydies2m/files/c/4/e/dataset_c4e67f40-cb86-438e-8bc0-6020ada9fc86.dat
-# target sequence database:        /tmp/tmpqydies2m/files/a/1/b/dataset_a1b4364c-0e9a-4709-b4ef-ab7e5661d9e9.dat
-# hits tabular output:             /tmp/tmpqydies2m/files/b/d/d/dataset_bdd87d82-1ce1-4051-8d5f-f7251bf7fd18.dat
-# hits output in Dfam format:      /tmp/tmpqydies2m/files/d/8/e/dataset_d8ee0d50-d171-4e8a-9c7d-1cbd4394296f.dat
-# alignment scores output:         /tmp/tmpqydies2m/files/5/1/3/dataset_5139892f-c507-40c4-b43d-f73023c634f4.dat
+# query file:                      /tmp/tmpzdnl83p_/files/9/7/3/dataset_973ac44a-c86b-42ed-b8fe-f747795642c7.dat
+# target sequence database:        /tmp/tmpzdnl83p_/files/6/5/6/dataset_65678542-5e91-4d72-9409-b7213a529ca0.dat
 # max ASCII text line length:      unlimited
 # SSV filter P threshold:       <= 0.02
 # Vit filter P threshold:       <= 0.001
 # Fwd filter P threshold:       <= 1e-05
 # input query is asserted as:      DNA
 # random number seed set to:       4
-# number of worker threads:        1
+# number of worker threads:        0
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
 Query:       MADE1  [M=80]
@@ -108,7 +105,7 @@
 Residues passing Vit filter:            1612  (0.00244); expected (0.001)
 Residues passing Fwd filter:            1194  (0.00181); expected (1e-05)
 Total number of hits:                      5  (0.000405)
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.05
-# Mc/sec: 1031.54
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 2197.54
 //
 [ok]