Mercurial > repos > iuc > hmmer_nhmmer
diff test-data/jackhmmer.out @ 5:b4fe2f703b4b draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7d31599a80c15f11ed00b2b3cbfb77ed6dfc8f3d"
| author | iuc |
|---|---|
| date | Tue, 16 Jun 2020 05:38:43 -0400 |
| parents | be0cc39776f9 |
| children | b28e8ed99424 |
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--- a/test-data/jackhmmer.out Mon Jun 11 15:52:05 2018 -0400 +++ b/test-data/jackhmmer.out Tue Jun 16 05:38:43 2020 -0400 @@ -1,12 +1,10 @@ # jackhmmer :: iteratively search a protein sequence against a protein database -# HMMER 3.2 (June 2018); http://hmmer.org/ -# Copyright (C) 2018 Howard Hughes Medical Institute. +# HMMER 3.3 (Nov 2019); http://hmmer.org/ +# Copyright (C) 2019 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -# query sequence file: /tmp/tmpw5_nj0/files/000/dataset_1.dat -# target sequence database: /tmp/tmpw5_nj0/files/000/dataset_2.dat -# per-seq hits tabular output: /tmp/tmpw5_nj0/files/000/dataset_4.dat -# per-dom hits tabular output: /tmp/tmpw5_nj0/files/000/dataset_5.dat +# query sequence file: /tmp/tmpfvu1k4r6/files/5/c/1/dataset_5c1435bb-ab6c-4203-863c-578c4a331ea1.dat +# target sequence database: /tmp/tmpfvu1k4r6/files/0/c/2/dataset_0c23de62-c430-473e-92ee-a18da9f58231.dat # max ASCII text line length: unlimited # Vit filter P threshold: <= 0.001 # Fwd filter P threshold: <= 1e-05 @@ -608,8 +606,8 @@ Passed Fwd filter: 44 (0.977778); expected 0.0 (1e-05) Initial search space (Z): 45 [actual number of targets] Domain search space (domZ): 44 [number of targets reported over threshold] -# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03 -# Mc/sec: 31.40 +# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04 +# Mc/sec: 20.54 @@ New targets included: 44 @@ New alignment includes: 45 subseqs (was 1), including original query @@ -1270,8 +1268,8 @@ Passed Fwd filter: 45 (1); expected 0.0 (1e-05) Initial search space (Z): 45 [actual number of targets] Domain search space (domZ): 45 [number of targets reported over threshold] -# CPU time: 0.19u 0.00s 00:00:00.19 Elapsed: 00:00:00.20 -# Mc/sec: 5.00 +# CPU time: 0.22u 0.00s 00:00:00.22 Elapsed: 00:00:00.22 +# Mc/sec: 4.45 @@ New targets included: 1 @@ New alignment includes: 46 subseqs (was 45), including original query @@ -1932,8 +1930,8 @@ Passed Fwd filter: 45 (1); expected 0.0 (1e-05) Initial search space (Z): 45 [actual number of targets] Domain search space (domZ): 45 [number of targets reported over threshold] -# CPU time: 0.19u 0.00s 00:00:00.19 Elapsed: 00:00:00.18 -# Mc/sec: 5.41 +# CPU time: 0.20u 0.00s 00:00:00.20 Elapsed: 00:00:00.20 +# Mc/sec: 5.00 @@ New targets included: 0 @@ New alignment includes: 46 subseqs (was 46), including original query @@ -2549,8 +2547,8 @@ Passed Fwd filter: 45 (1); expected 0.0 (1e-05) Initial search space (Z): 45 [actual number of targets] Domain search space (domZ): 45 [number of targets reported over threshold] -# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03 -# Mc/sec: 31.81 +# CPU time: 0.05u 0.00s 00:00:00.05 Elapsed: 00:00:00.04 +# Mc/sec: 20.84 @@ New targets included: 45 @@ New alignment includes: 46 subseqs (was 1), including original query @@ -2566,638 +2564,638 @@ --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- - 3.6e-74 238.9 0.1 4e-74 238.8 0.1 1.0 1 HBB_MANSP - 1.7e-73 236.7 0.3 1.9e-73 236.6 0.3 1.0 1 HBB_URSMA - 2.2e-72 233.1 0.8 2.4e-72 233.0 0.8 1.0 1 HBB_RABIT - 5.4e-72 231.8 0.1 6e-72 231.7 0.1 1.0 1 HBB_SUNMU - 7e-72 231.5 0.2 7.7e-72 231.3 0.2 1.0 1 HBB_CALAR - 9.6e-72 231.0 0.0 1.1e-71 230.9 0.0 1.0 1 HBB_COLLI - 2.5e-71 229.7 0.4 2.8e-71 229.6 0.4 1.0 1 HBB_TACAC - 4.8e-71 228.8 0.4 5.3e-71 228.6 0.4 1.0 1 HBE_PONPY - 5.1e-71 228.7 0.2 5.7e-71 228.5 0.2 1.0 1 HBB_EQUHE - 1.3e-70 227.3 1.0 1.5e-70 227.2 1.0 1.0 1 HBB_SPECI - 2e-70 226.8 0.6 2.2e-70 226.6 0.6 1.0 1 HBB_SPETO - 3.7e-70 225.9 0.1 4.1e-70 225.8 0.1 1.0 1 HBB_TRIIN - 4.1e-70 225.7 0.0 4.6e-70 225.6 0.0 1.0 1 HBB_ORNAN - 5.7e-70 225.3 0.0 6.4e-70 225.1 0.0 1.0 1 HBB_LARRI - 1.8e-68 220.5 0.0 1.9e-68 220.3 0.0 1.0 1 HBB_TUPGL - 1.5e-67 217.4 0.1 1.7e-67 217.3 0.1 1.0 1 HBB1_VAREX - 7.8e-64 205.4 0.3 8.7e-64 205.2 0.3 1.0 1 HBBL_RANCA - 4.5e-63 202.9 0.3 5e-63 202.8 0.3 1.0 1 HBA_MESAU - 2e-62 200.8 0.8 2.3e-62 200.6 0.8 1.0 1 HBB2_XENTR - 4.6e-62 199.6 0.7 5e-62 199.5 0.7 1.0 1 HBA_PONPY - 8.7e-62 198.7 0.3 9.6e-62 198.6 0.3 1.0 1 HBA_MACFA - 1.3e-61 198.2 0.3 1.4e-61 198.1 0.3 1.0 1 HBA_MACSI - 2.1e-61 197.5 0.1 2.4e-61 197.3 0.1 1.0 1 HBA_AILME - 6.6e-61 195.9 0.6 7.3e-61 195.7 0.6 1.0 1 HBA2_GALCR - 7.1e-61 195.8 0.4 7.8e-61 195.7 0.4 1.0 1 HBA_FRAPO - 7.3e-61 195.7 0.4 8e-61 195.6 0.4 1.0 1 HBA_PHACO - 7.6e-61 195.7 0.4 8.3e-61 195.6 0.4 1.0 1 HBA2_BOSMU - 2.4e-60 194.0 0.1 2.7e-60 193.9 0.1 1.0 1 HBA_ERIEU - 3.3e-60 193.6 0.0 3.6e-60 193.5 0.0 1.0 1 HBA_PROLO - 3.9e-60 193.4 0.4 4.3e-60 193.2 0.4 1.0 1 HBA_ANSSE - 4.1e-60 193.3 0.5 4.5e-60 193.2 0.5 1.0 1 HBA_PAGLA - 2.7e-59 190.7 0.5 2.9e-59 190.5 0.5 1.0 1 HBA_TRIOC - 6.3e-59 189.4 0.5 7e-59 189.3 0.5 1.0 1 HBAD_CHLME - 7.5e-59 189.2 0.1 8.2e-59 189.1 0.1 1.0 1 HBAZ_HORSE - 1.6e-58 188.1 0.2 1.8e-58 188.0 0.2 1.0 1 HBA_COLLI - 2e-58 187.8 0.1 2.2e-58 187.7 0.1 1.0 1 HBAD_PASMO - 2.9e-57 184.1 1.0 3.2e-57 183.9 1.0 1.0 1 MYG_SAISC - 3e-57 184.0 1.9 3.3e-57 183.9 1.9 1.0 1 MYG_LYCPI - 8.3e-57 182.6 0.2 9.2e-57 182.4 0.2 1.0 1 MYG_PROGU - 8.8e-57 182.5 2.3 9.7e-57 182.4 2.3 1.0 1 MYG_ESCGI - 2.5e-56 181.0 1.0 2.7e-56 180.9 1.0 1.0 1 MYG_HORSE - 4.7e-56 180.1 0.3 5.2e-56 180.0 0.3 1.0 1 MYG_MOUSE - 7.5e-56 179.5 0.1 8.3e-56 179.3 0.1 1.0 1 HBA4_SALIR - 2.7e-55 177.7 0.0 3e-55 177.5 0.0 1.0 1 HBB2_TRICR - 4.6e-45 144.5 0.3 5.1e-45 144.3 0.3 1.0 1 MYG_MUSAN + 2.3e-75 242.8 0.1 2.6e-75 242.6 0.1 1.0 1 HBB_MANSP + 1.1e-74 240.6 0.3 1.2e-74 240.5 0.3 1.0 1 HBB_URSMA + 1.4e-73 237.0 0.9 1.5e-73 236.9 0.9 1.0 1 HBB_RABIT + 4.1e-73 235.5 0.2 4.5e-73 235.4 0.2 1.0 1 HBB_CALAR + 4.2e-73 235.4 0.1 4.7e-73 235.3 0.1 1.0 1 HBB_SUNMU + 7.8e-73 234.6 0.0 8.7e-73 234.4 0.0 1.0 1 HBB_COLLI + 1.9e-72 233.3 0.4 2.1e-72 233.2 0.4 1.0 1 HBB_TACAC + 3.1e-72 232.6 0.4 3.4e-72 232.5 0.4 1.0 1 HBE_PONPY + 3.5e-72 232.5 0.2 3.8e-72 232.3 0.2 1.0 1 HBB_EQUHE + 1.1e-71 230.8 1.0 1.3e-71 230.7 1.0 1.0 1 HBB_SPECI + 1.6e-71 230.3 0.6 1.7e-71 230.2 0.6 1.0 1 HBB_SPETO + 2.6e-71 229.6 0.1 2.9e-71 229.5 0.1 1.0 1 HBB_TRIIN + 2.9e-71 229.5 0.0 3.2e-71 229.4 0.0 1.0 1 HBB_ORNAN + 5.2e-71 228.7 0.0 5.7e-71 228.5 0.0 1.0 1 HBB_LARRI + 1.1e-69 224.3 0.0 1.3e-69 224.2 0.0 1.0 1 HBB_TUPGL + 1.5e-68 220.7 0.1 1.6e-68 220.5 0.1 1.0 1 HBB1_VAREX + 7.6e-65 208.7 0.3 8.5e-65 208.5 0.3 1.0 1 HBBL_RANCA + 2.5e-63 203.7 0.9 2.8e-63 203.6 0.9 1.0 1 HBB2_XENTR + 6.9e-63 202.3 0.3 7.5e-63 202.2 0.3 1.0 1 HBA_MESAU + 1.1e-61 198.4 0.7 1.2e-61 198.3 0.7 1.0 1 HBA_PONPY + 1.8e-61 197.7 0.3 1.9e-61 197.6 0.3 1.0 1 HBA_MACFA + 2.6e-61 197.2 0.3 2.8e-61 197.1 0.3 1.0 1 HBA_MACSI + 3.6e-61 196.8 0.1 3.9e-61 196.6 0.1 1.0 1 HBA_AILME + 1.2e-60 195.1 0.4 1.3e-60 194.9 0.4 1.0 1 HBA_PHACO + 1.2e-60 195.1 0.4 1.3e-60 194.9 0.4 1.0 1 HBA2_BOSMU + 1.2e-60 195.0 0.4 1.4e-60 194.9 0.4 1.0 1 HBA_FRAPO + 1.4e-60 194.8 0.6 1.6e-60 194.7 0.6 1.0 1 HBA2_GALCR + 4.5e-60 193.2 0.1 4.9e-60 193.1 0.1 1.0 1 HBA_ERIEU + 5.1e-60 193.0 0.0 5.6e-60 192.9 0.0 1.0 1 HBA_PROLO + 7.4e-60 192.5 0.4 8.1e-60 192.3 0.4 1.0 1 HBA_ANSSE + 7.4e-60 192.5 0.5 8.1e-60 192.3 0.5 1.0 1 HBA_PAGLA + 4.5e-59 189.9 0.5 5e-59 189.8 0.5 1.0 1 HBA_TRIOC + 6e-59 189.5 0.5 6.6e-59 189.4 0.5 1.0 1 HBAD_CHLME + 2.2e-58 187.7 0.1 2.5e-58 187.5 0.1 1.0 1 HBAZ_HORSE + 2.4e-58 187.6 0.1 2.7e-58 187.4 0.1 1.0 1 HBAD_PASMO + 2.5e-58 187.5 0.2 2.8e-58 187.4 0.2 1.0 1 HBA_COLLI + 1.9e-56 181.4 0.0 2.2e-56 181.2 0.0 1.0 1 HBB2_TRICR + 5.3e-56 180.0 0.1 5.8e-56 179.8 0.1 1.0 1 HBA4_SALIR + 9.5e-56 179.1 1.8 1.1e-55 179.0 1.8 1.0 1 MYG_LYCPI + 1.3e-55 178.7 1.0 1.4e-55 178.6 1.0 1.0 1 MYG_SAISC + 3.1e-55 177.5 2.2 3.4e-55 177.3 2.2 1.0 1 MYG_ESCGI + 5.1e-55 176.8 0.2 5.7e-55 176.6 0.2 1.0 1 MYG_PROGU + 9.3e-55 175.9 1.0 1e-54 175.8 1.0 1.0 1 MYG_HORSE + 1.4e-54 175.3 0.3 1.6e-54 175.2 0.3 1.0 1 MYG_MOUSE + 1.6e-44 142.7 0.3 1.8e-44 142.6 0.3 1.0 1 MYG_MUSAN Domain annotation for each sequence (and alignments): >> HBB_MANSP # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 238.8 0.1 4e-74 4e-74 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 242.6 0.1 2.6e-75 2.6e-75 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 238.8 bits; conditional E-value: 4e-74 + == domain 1 score: 242.6 bits; conditional E-value: 2.6e-75 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vhl++eek++v+++wgkv++devG+eaL rllvvyP+t+r+Fd+F+dlss+dav+g++kvkahGkkvl a+++++++ld+lkg++a+LselH++kl+vdpenfkll++vlv+vLa++f+keftp+vqaa++k++a+vanala+kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vhl++eek++v+++wgkv++devG+eaL rllvvyP+t+r+Fd+Fgdlss+dav+g++kvkahgkkvl a+++++++ld+lkg++a+LselH++kl+vdpenfkll++vlv+vLa++f+keftp+vqaa++k++a+vanala+kYh HBB_MANSP 1 VHLTPEEKTAVTTLWGKVNVDEVGGEALGRLLVVYPWTQRFFDSFGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLNHLDNLKGTFAQLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKYH 146 8************************************************************************************************************************************************8 PP >> HBB_URSMA # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 236.6 0.3 1.9e-73 1.9e-73 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 240.5 0.3 1.2e-74 1.2e-74 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 236.6 bits; conditional E-value: 1.9e-73 + == domain 1 score: 240.5 bits; conditional E-value: 1.2e-74 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vhl+ eek+lv+ +wgkv++devG+eaL rllvvyP+t+r+Fd+F+dlss+da+++++kvkahGkkvl+++++++k+ld+lkg++akLselH++kl+vdpenfkll++vlv+vLa++f+keftp+vqaa++k++a+vanala+kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vhl+ eek+lv+ +wgkv++devG+eaL rllvvyP+t+r+Fd+Fgdlss+da+++++kvkahgkkvl+++++++k+ld+lkg++akLselH++kl+vdpenfkll++vlv+vLa++f+keftp+vqaa++k++a+vanala+kYh HBB_URSMA 1 VHLTGEEKSLVTGLWGKVNVDEVGGEALGRLLVVYPWTQRFFDSFGDLSSADAIMNNPKVKAHGKKVLNSFSDGLKNLDNLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKYH 146 8************************************************************************************************************************************************8 PP >> HBB_RABIT # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 233.0 0.8 2.4e-72 2.4e-72 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 236.9 0.9 1.5e-73 1.5e-73 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 233.0 bits; conditional E-value: 2.4e-72 + == domain 1 score: 236.9 bits; conditional E-value: 1.5e-73 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vhls+eek++v+a+wgkv+++evG+eaL rllvvyP+t+r+F++F+dlss++av++++kvkahGkkvl+a++e++++ld+lkg++akLselH++kl+vdpenf+ll++vlv+vL+++f+keftp+vqaa++k++a+vanala+kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vhls+eek++v+a+wgkv+++evG+eaL rllvvyP+t+r+F++Fgdlss++av++++kvkahgkkvl+a++e++++ld+lkg++akLselH++kl+vdpenf+ll++vlv+vL+++f+keftp+vqaa++k++a+vanala+kYh HBB_RABIT 1 VHLSSEEKSAVTALWGKVNVEEVGGEALGRLLVVYPWTQRFFESFGDLSSANAVMNNPKVKAHGKKVLAAFSEGLSHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVIVLSHHFGKEFTPQVQAAYQKVVAGVANALAHKYH 146 8************************************************************************************************************************************************8 PP +>> HBB_CALAR + # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc + --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- + 1 ! 235.4 0.2 4.5e-73 4.5e-73 2 147 .] 1 146 [] 1 146 [] 1.00 + + Alignments for each domain: + == domain 1 score: 235.4 bits; conditional E-value: 4.5e-73 + xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vhl+ eek++v+a+wgkv++devG+eaL rllvvyP+t+r+F++Fgdls++dav++++kvkahgkkvl a+++++++ld+lkg++a+LselH++kl+vdpenf+ll++vlv+vLa++f+keftp vqaa++k++a+vanala+kYh + HBB_CALAR 1 VHLTGEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMNNPKVKAHGKKVLGAFSDGLTHLDNLKGTFAHLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPVVQAAYQKVVAGVANALAHKYH 146 + 8************************************************************************************************************************************************8 PP + >> HBB_SUNMU # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 231.7 0.1 6e-72 6e-72 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 235.3 0.1 4.7e-73 4.7e-73 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 231.7 bits; conditional E-value: 6e-72 + == domain 1 score: 235.3 bits; conditional E-value: 4.7e-73 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vhls eeka v+ +wgkv++devGaeaL rllvvyP+t+r+Fd+F+dlss++av+g++kvkahGkkvl++lge+v +ld+lkg++akLselH++kl+vdpenf+ll++vlvvvLa+kf+keftp vqaa++k++a+vanala+kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vhls eeka v+ +wgkv++devGaeaL rllvvyP+t+r+Fd+Fgdlss++av+g++kvkahgkkvl++lge+v +ld+lkg++akLselH++kl+vdpenf+ll++vlvvvLa+kf+keftp vqaa++k++a+vanala+kYh HBB_SUNMU 1 VHLSGEEKACVTGLWGKVNEDEVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNPKVKAHGKKVLHSLGEGVANLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVVVLASKFGKEFTPPVQAAFQKVVAGVANALAHKYH 146 8************************************************************************************************************************************************8 PP ->> HBB_CALAR - # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc - --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 231.3 0.2 7.7e-72 7.7e-72 2 147 .] 1 146 [] 1 146 [] 1.00 - - Alignments for each domain: - == domain 1 score: 231.3 bits; conditional E-value: 7.7e-72 - xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vhl+ eek++v+a+wgkv++devG+eaL rllvvyP+t+r+F++F+dls++dav++++kvkahGkkvl a+++++++ld+lkg++a+LselH++kl+vdpenf+ll++vlv+vLa++f+keftp vqaa++k++a+vanala+kYh - HBB_CALAR 1 VHLTGEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMNNPKVKAHGKKVLGAFSDGLTHLDNLKGTFAHLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPVVQAAYQKVVAGVANALAHKYH 146 - 8************************************************************************************************************************************************8 PP - >> HBB_COLLI # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 230.9 0.0 1.1e-71 1.1e-71 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 234.4 0.0 8.7e-73 8.7e-73 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 230.9 bits; conditional E-value: 1.1e-71 + == domain 1 score: 234.4 bits; conditional E-value: 8.7e-73 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vh+saeek+l++++wgkv++ ++GaeaL+rll+vyP+t+r+F++F++lss++a++g+++vkahGkkvlt++g+avk+ld++kg++a+LselH++kl+vdpenf+ll+++lv++Laa+f+k+ftpe+qaa++kl+++va+ala+kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vh+saeek+l++++wgkv++ ++GaeaL+rll+vyP+t+r+F++Fg+lss++a++g+++vkahgkkvlt++g+avk+ld++kg++a+LselH++kl+vdpenf+ll+++lv++Laa+f+k+ftpe+qaa++kl+++va+ala+kYh HBB_COLLI 1 VHWSAEEKQLITSIWGKVNVADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAHGKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARKYH 146 8************************************************************************************************************************************************8 PP >> HBB_TACAC # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 229.6 0.4 2.8e-71 2.8e-71 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 233.2 0.4 2.1e-72 2.1e-72 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 229.6 bits; conditional E-value: 2.8e-71 + == domain 1 score: 233.2 bits; conditional E-value: 2.1e-72 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vhls +ek++v+++wg+v+++e+G+eaL rllvvyP+t+r+F++F+dlss+dav+g+akvkahG+kvlt++g+a+k+ld+lkg++akLselH++kl+vdpenf+ l++vlvvvLa++f+keftpe+qaa++kl+++v++ala+kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vhls +ek++v+++wg+v+++e+G+eaL rllvvyP+t+r+F++Fgdlss+dav+g+akvkahg+kvlt++g+a+k+ld+lkg++akLselH++kl+vdpenf+ l++vlvvvLa++f+keftpe+qaa++kl+++v++ala+kYh HBB_TACAC 1 VHLSGSEKTAVTNLWGHVNVNELGGEALGRLLVVYPWTQRFFESFGDLSSADAVMGNAKVKAHGAKVLTSFGDALKNLDNLKGTFAKLSELHCDKLHVDPENFNRLGNVLVVVLARHFSKEFTPEAQAAWQKLVSGVSHALAHKYH 146 8************************************************************************************************************************************************8 PP >> HBE_PONPY # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 228.6 0.4 5.3e-71 5.3e-71 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 232.5 0.4 3.4e-72 3.4e-72 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 228.6 bits; conditional E-value: 5.3e-71 + == domain 1 score: 232.5 bits; conditional E-value: 3.4e-72 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vh++aeeka+v+++w+k++++e+G+eaL rllvvyP+t+r+Fd+F++lss++a+ g++kvkahGkkvlt++g+a+k++d+lk+++akLselH++kl+vdpenfkll++v+v++La++f+keftpevqaa++kl++ava ala+kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vh++aeeka+v+++w+k++++e+G+eaL rllvvyP+t+r+Fd+Fg+lss++a+ g++kvkahgkkvlt++g+a+k++d+lk+++akLselH++kl+vdpenfkll++v+v++La++f+keftpevqaa++kl++ava ala+kYh HBE_PONPY 1 VHFTAEEKAAVTSLWSKMNVEEAGGEALGRLLVVYPWTQRFFDSFGNLSSPSAILGNPKVKAHGKKVLTSFGDAIKNMDNLKTTFAKLSELHCDKLHVDPENFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKYH 146 8************************************************************************************************************************************************8 PP >> HBB_EQUHE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 228.5 0.2 5.7e-71 5.7e-71 2 147 .] 1 146 [] 1 146 [] 0.99 + 1 ! 232.3 0.2 3.8e-72 3.8e-72 2 147 .] 1 146 [] 1 146 [] 0.99 Alignments for each domain: - == domain 1 score: 228.5 bits; conditional E-value: 5.7e-71 + == domain 1 score: 232.3 bits; conditional E-value: 3.8e-72 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - v+ls eeka+v a+w+kv+++evG+eaL rllvvyP+t+r+Fd+F+dls+++av+g++kvkahGkkvl+++ge+v++ld+lkg++a+LselH++kl+vdpenf+ll++vlvvvLa++f+k+ftpe qa+++k++a+vanala+kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + v+ls eeka+v a+w+kv+++evG+eaL rllvvyP+t+r+Fd+Fgdls+++av+g++kvkahgkkvl+++ge+v++ld+lkg++a+LselH++kl+vdpenf+ll++vlvvvLa++f+k+ftpe qa+++k++a+vanala+kYh HBB_EQUHE 1 VQLSGEEKAAVLALWDKVNEEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPAAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAQLSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH 146 789**********************************************************************************************************************************************8 PP >> HBB_SPECI # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 227.2 1.0 1.5e-70 1.5e-70 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 230.7 1.0 1.3e-71 1.3e-71 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 227.2 bits; conditional E-value: 1.5e-70 + == domain 1 score: 230.7 bits; conditional E-value: 1.3e-71 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vhls+ ek++++++wgkv+a evGaeaL rllvvyP+t+r+Fd+F+dlss++av+g+akvkahGkkv++++++++k+ld+lkg++a+LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k++a+vanala+kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vhls+ ek++++++wgkv+a evGaeaL rllvvyP+t+r+Fd+Fgdlss++av+g+akvkahgkkv++++++++k+ld+lkg++a+LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k++a+vanala+kYh HBB_SPECI 1 VHLSDGEKNAISTAWGKVHAAEVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALAHKYH 146 8************************************************************************************************************************************************8 PP >> HBB_SPETO # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 226.6 0.6 2.2e-70 2.2e-70 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 230.2 0.6 1.7e-71 1.7e-71 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 226.6 bits; conditional E-value: 2.2e-70 + == domain 1 score: 230.2 bits; conditional E-value: 1.7e-71 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vhl++ ek++++++wgkv+a e+GaeaL rllvvyP+t+r+Fd+F+dlss++av+g+akvkahGkkv++++++++k+ld+lkg++a+LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k++a+vanal++kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vhl++ ek++++++wgkv+a e+GaeaL rllvvyP+t+r+Fd+Fgdlss++av+g+akvkahgkkv++++++++k+ld+lkg++a+LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k++a+vanal++kYh HBB_SPETO 1 VHLTDGEKNAISTAWGKVNAAEIGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALSHKYH 146 8************************************************************************************************************************************************8 PP >> HBB_TRIIN # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 225.8 0.1 4.1e-70 4.1e-70 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 229.5 0.1 2.9e-71 2.9e-71 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 225.8 bits; conditional E-value: 4.1e-70 + == domain 1 score: 229.5 bits; conditional E-value: 2.9e-71 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vhl++eekalv +w kv+++e+G+eaL rllvvyP+t+r+F++F+dlss++a+++++kvkahG+kv+t++g+++k+l+dlkga+a+LselH++kl+vdpenf+ll++vlv+vLa++f+kef+pe+qaa++k++a+vanala+kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vhl++eekalv +w kv+++e+G+eaL rllvvyP+t+r+F++Fgdlss++a+++++kvkahg+kv+t++g+++k+l+dlkga+a+LselH++kl+vdpenf+ll++vlv+vLa++f+kef+pe+qaa++k++a+vanala+kYh HBB_TRIIN 1 VHLTPEEKALVIGLWAKVNVKEYGGEALGRLLVVYPWTQRFFEHFGDLSSASAIMNNPKVKAHGEKVFTSFGDGLKHLEDLKGAFAELSELHCDKLHVDPENFRLLGNVLVCVLARHFGKEFSPEAQAAYQKVVAGVANALAHKYH 146 8************************************************************************************************************************************************8 PP >> HBB_ORNAN # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 225.6 0.0 4.6e-70 4.6e-70 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 229.4 0.0 3.2e-71 3.2e-71 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 225.6 bits; conditional E-value: 4.6e-70 + == domain 1 score: 229.4 bits; conditional E-value: 3.2e-71 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vhls ek++v+++wgkv+++e+G+eaL rllvvyP+t+r+F+ F+dlss+ av+g++kvkahG+kvlt++g+a+k+lddlkg++akLselH++kl+vdpenf+ l++vl+vvLa++f+k+f+pevqaa++kl+++va+al++kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vhls ek++v+++wgkv+++e+G+eaL rllvvyP+t+r+F+ Fgdlss+ av+g++kvkahg+kvlt++g+a+k+lddlkg++akLselH++kl+vdpenf+ l++vl+vvLa++f+k+f+pevqaa++kl+++va+al++kYh HBB_ORNAN 1 VHLSGGEKSAVTNLWGKVNINELGGEALGRLLVVYPWTQRFFEAFGDLSSAGAVMGNPKVKAHGAKVLTSFGDALKNLDDLKGTFAKLSELHCDKLHVDPENFNRLGNVLIVVLARHFSKDFSPEVQAAWQKLVSGVAHALGHKYH 146 8************************************************************************************************************************************************8 PP >> HBB_LARRI # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 225.1 0.0 6.4e-70 6.4e-70 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 228.5 0.0 5.7e-71 5.7e-71 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 225.1 bits; conditional E-value: 6.4e-70 + == domain 1 score: 228.5 bits; conditional E-value: 5.7e-71 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vh+saeek+l++ +wgkv++ ++GaeaL+rll+vyP+t+r+F +F++lss++a++g++ v+ahGkkvlt++geavk+ld++k+++a+LselH++kl+vdpenf+ll+++l++vLaa+f k+ftp+ qaa++kl+++va+ala+kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vh+saeek+l++ +wgkv++ ++GaeaL+rll+vyP+t+r+F +Fg+lss++a++g++ v+ahgkkvlt++geavk+ld++k+++a+LselH++kl+vdpenf+ll+++l++vLaa+f k+ftp+ qaa++kl+++va+ala+kYh HBB_LARRI 1 VHWSAEEKQLITGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSSPTAINGNPMVRAHGKKVLTSFGEAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFAKDFTPDSQAAWQKLVRVVAHALARKYH 146 8************************************************************************************************************************************************8 PP >> HBB_TUPGL # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 220.3 0.0 1.9e-68 1.9e-68 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 224.2 0.0 1.3e-69 1.3e-69 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 220.3 bits; conditional E-value: 1.9e-68 + == domain 1 score: 224.2 bits; conditional E-value: 1.3e-69 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vhls eeka+v+ +wgkv+ ++vG++ L ll+vyP+t+r+Fd+F+dlss++av++++kvkahGkkvlt++++++++ld+lkg++akLselH++kl+vdpenf+ll++vlv vLa++f+ eftp+vqaa++k++a+vanala+kYh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vhls eeka+v+ +wgkv+ ++vG++ L ll+vyP+t+r+Fd+Fgdlss++av++++kvkahgkkvlt++++++++ld+lkg++akLselH++kl+vdpenf+ll++vlv vLa++f+ eftp+vqaa++k++a+vanala+kYh HBB_TUPGL 1 VHLSGEEKAAVTGLWGKVDLEKVGGQSLGSLLIVYPWTQRFFDSFGDLSSPSAVMSNPKVKAHGKKVLTSFSDGLNHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVRVLACNFGPEFTPQVQAAFQKVVAGVANALAHKYH 146 8************************************************************************************************************************************************8 PP >> HBB1_VAREX # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 217.3 0.1 1.7e-67 1.7e-67 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 220.5 0.1 1.6e-68 1.6e-68 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 217.3 bits; conditional E-value: 1.7e-67 + == domain 1 score: 220.5 bits; conditional E-value: 1.6e-68 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vh++aeek+l+ ++wgk++++ +G+e+L+ llv yP+t+r+F++F++lss++a++g+++vkahGkkvlt++g+a+k+ld++k+++akLselH++kl+vdp+nfkll++vlv+vLa +++keftp+++aa++kl+++v+++la++Yh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vh++aeek+l+ ++wgk++++ +G+e+L+ llv yP+t+r+F++Fg+lss++a++g+++vkahgkkvlt++g+a+k+ld++k+++akLselH++kl+vdp+nfkll++vlv+vLa +++keftp+++aa++kl+++v+++la++Yh HBB1_VAREX 1 VHWTAEEKQLICSLWGKIDVGLIGGETLAGLLVIYPWTQRQFSHFGNLSSPTAIAGNPRVKAHGKKVLTSFGDAIKNLDNIKDTFAKLSELHCDKLHVDPTNFKLLGNVLVIVLADHHGKEFTPAHHAAYQKLVNVVSHSLARRYH 146 8************************************************************************************************************************************************8 PP >> HBBL_RANCA # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 205.2 0.3 8.7e-64 8.7e-64 2 147 .] 1 146 [] 1 146 [] 1.00 + 1 ! 208.5 0.3 8.5e-65 8.5e-65 2 147 .] 1 146 [] 1 146 [] 1.00 Alignments for each domain: - == domain 1 score: 205.2 bits; conditional E-value: 8.7e-64 + == domain 1 score: 208.5 bits; conditional E-value: 8.5e-65 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 - vh++aeeka +++vw+kv++++ G+eaL+rl++vyP+t+ryF++F+dlss++a++g++kv+ahGkk+l a+++a+++ldd+kg+l++Lse Ha++l+vdpenf+ l+evl+vvL ak++k+f+p+vq+ ++k++a++ +al++ Yh + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147 + vh++aeeka +++vw+kv++++ G+eaL+rl++vyP+t+ryF++Fgdlss++a++g++kv+ahgkk+l a+++a+++ldd+kg+l++Lse Ha++l+vdpenf+ l+evl+vvL ak++k+f+p+vq++++k++a++ +al++ Yh HBBL_RANCA 1 VHWTAEEKAVINSVWQKVDVEQDGHEALTRLFIVYPWTQRYFSTFGDLSSPAAIAGNPKVHAHGKKILGAIDNAIHNLDDVKGTLHDLSEEHANELHVDPENFRRLGEVLIVVLGAKLGKAFSPQVQHVWEKFIAVLVDALSHSYH 146 8************************************************************************************************************************************************8 PP +>> HBB2_XENTR + # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc + --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- + 1 ! 203.6 0.9 2.8e-63 2.8e-63 2 146 .. 1 145 [. 1 146 [] 1.00 + + Alignments for each domain: + == domain 1 score: 203.6 bits; conditional E-value: 2.8e-63 + xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + vh++aeeka++++vwgkv++++ G++aL+rllvvyP+t+ryF++Fg+ls+ +av+g+ kvkahg+kvl+a+g+a+++ldd+k++l+ Ls++Ha++l+vdpenfk l++vlv+vLaak++++ftp+vqa+++kl a++ +al++ Y + HBB2_XENTR 1 VHWTAEEKATIASVWGKVDIEQDGHDALSRLLVVYPWTQRYFSSFGNLSNVSAVSGNVKVKAHGNKVLSAVGSAIQHLDDVKSHLKGLSKSHAEDLHVDPENFKRLADVLVIVLAAKLGSAFTPQVQAVWEKLNATLVAALSHGY 145 + 8***********************************************************************************************************************************************9 PP + >> HBA_MESAU # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 202.8 0.3 5e-63 5e-63 4 146 .. 2 140 .. 1 141 [] 0.99 + 1 ! 202.2 0.3 7.5e-63 7.5e-63 4 146 .. 2 140 .. 1 141 [] 0.99 Alignments for each domain: - == domain 1 score: 202.8 bits; conditional E-value: 5e-63 + == domain 1 score: 202.2 bits; conditional E-value: 7.5e-63 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - lsa++k++++++wgk+ +a+e+GaeaLer++ vyP+tk+yF++F d+s +gsa+vk+hGkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p++ftp+v+a+ldk++a+v+++l++kY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + lsa++k++++++wgk+ +a+e+GaeaLer++ vyP+tk+yF++F d+s +gsa+vk+hgkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p++ftp+v+a+ldk++a+v+++l++kY HBA_MESAU 2 LSAKDKTNISEAWGKIggHAGEYGAEALERMFFVYPTTKTYFPHF-DVS-----HGSAQVKGHGKKVADALTNAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLANHHPADFTPAVHASLDKFFASVSTVLTSKY 140 - 89**************8889*************************.999.....******************************************************************************************* PP - ->> HBB2_XENTR - # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc - --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 200.6 0.8 2.3e-62 2.3e-62 2 146 .. 1 145 [. 1 146 [] 1.00 - - Alignments for each domain: - == domain 1 score: 200.6 bits; conditional E-value: 2.3e-62 - xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - vh++aeeka++++vwgkv++++ G++aL+rllvvyP+t+ryF++F++ls+ +av+g+ kvkahG+kvl+a+g+a+++ldd+k++l+ Ls++Ha++l+vdpenfk l++vlv+vLaak++++ftp+vqa ++kl a++ +al++ Y - HBB2_XENTR 1 VHWTAEEKATIASVWGKVDIEQDGHDALSRLLVVYPWTQRYFSSFGNLSNVSAVSGNVKVKAHGNKVLSAVGSAIQHLDDVKSHLKGLSKSHAEDLHVDPENFKRLADVLVIVLAAKLGSAFTPQVQAVWEKLNATLVAALSHGY 145 - 8***********************************************************************************************************************************************9 PP + 89**************9889*************************.999.....******************************************************************************************* PP >> HBA_PONPY # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 199.5 0.7 5e-62 5e-62 4 146 .. 2 140 .. 1 141 [] 0.98 + 1 ! 198.3 0.7 1.2e-61 1.2e-61 4 146 .. 2 140 .. 1 141 [] 0.98 Alignments for each domain: - == domain 1 score: 199.5 bits; conditional E-value: 5e-62 + == domain 1 score: 198.3 bits; conditional E-value: 1.2e-61 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls+++k++vk++wgkv +a+++GaeaLer++ ++P+tk+yF++F dls +gsa+vk+hGkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+la+v+++l++kY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls+++k++vk++wgkv +a+++GaeaLer++ ++P+tk+yF++F dls +gsa+vk hgkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+la+v+++l++kY HBA_PONPY 2 LSPADKTNVKTAWGKVgaHAGDYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKDHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140 - 799*************77789************************.**9.....******************************************************************************************* PP + 799*************87789************************.**9.....******************************************************************************************* PP >> HBA_MACFA # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 198.6 0.3 9.6e-62 9.6e-62 4 146 .. 2 140 .. 1 141 [] 0.99 + 1 ! 197.6 0.3 1.9e-61 1.9e-61 4 146 .. 2 140 .. 1 141 [] 0.99 Alignments for each domain: - == domain 1 score: 198.6 bits; conditional E-value: 9.6e-62 + == domain 1 score: 197.6 bits; conditional E-value: 1.9e-61 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls+++k++vka+wgkv +a+e+GaeaLer++ ++P+tk+yF++F dls +gsa+vk+hGkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+la+v+++l++kY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls+++k++vka+wgkv +a+e+GaeaLer++ ++P+tk+yF++F dls +gsa+vk+hgkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+la+v+++l++kY HBA_MACFA 2 LSPADKTNVKAAWGKVggHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140 - 799*************8889*************************.**9.....******************************************************************************************* PP + 799*************9889*************************.**9.....******************************************************************************************* PP >> HBA_MACSI # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 198.1 0.3 1.4e-61 1.4e-61 4 146 .. 2 140 .. 1 141 [] 0.99 + 1 ! 197.1 0.3 2.8e-61 2.8e-61 4 146 .. 2 140 .. 1 141 [] 0.99 Alignments for each domain: - == domain 1 score: 198.1 bits; conditional E-value: 1.4e-61 + == domain 1 score: 197.1 bits; conditional E-value: 2.8e-61 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls+++k++vk++wgkv +a+e+GaeaLer++ ++P+tk+yF++F dls +gsa+vk+hGkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+la+v+++l++kY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls+++k++vk++wgkv +a+e+GaeaLer++ ++P+tk+yF++F dls +gsa+vk+hgkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+la+v+++l++kY HBA_MACSI 2 LSPADKTNVKDAWGKVggHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140 - 799*************8889*************************.**9.....******************************************************************************************* PP + 799*************9889*************************.**9.....******************************************************************************************* PP >> HBA_AILME # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 197.3 0.1 2.4e-61 2.4e-61 4 146 .. 2 140 .. 1 141 [] 0.99 + 1 ! 196.6 0.1 3.9e-61 3.9e-61 4 146 .. 2 140 .. 1 141 [] 0.99 + + Alignments for each domain: + == domain 1 score: 196.6 bits; conditional E-value: 3.9e-61 + xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls+++k++vka w+k+ +a+e+G+eaLer + ++P+tk+yF++F dls gsa+vkahgkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v+a+ldk+++av+++l++kY + HBA_AILME 2 LSPADKTNVKATWDKIggHAGEYGGEALERTFASFPTTKTYFPHF-DLS-----PGSAQVKAHGKKVADALTTAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLASHHPAEFTPAVHASLDKFFSAVSTVLTSKY 140 + 799*************9889*************************.**9.....9****************************************************************************************** PP + +>> HBA_PHACO + # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc + --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- + 1 ! 194.9 0.4 1.3e-60 1.3e-60 4 146 .. 2 140 .. 1 141 [] 0.99 Alignments for each domain: - == domain 1 score: 197.3 bits; conditional E-value: 2.4e-61 + == domain 1 score: 194.9 bits; conditional E-value: 1.3e-60 + xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + lsa++k++vk +++k+ +a+e+GaeaLer++++yP+tk+yF++F dls +gsa++k+hgkkv++al eav+++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l+av ++l+akY + HBA_PHACO 2 LSAADKNNVKGIFTKIagHAEEYGAEALERMFITYPSTKTYFPHF-DLS-----HGSAQIKGHGKKVVAALIEAVNHIDDITGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGTVLTAKY 140 + 89**************988**************************.**9.....******************************************************************************************* PP + +>> HBA2_BOSMU + # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc + --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- + 1 ! 194.9 0.4 1.3e-60 1.3e-60 4 146 .. 2 140 .. 1 141 [] 0.99 + + Alignments for each domain: + == domain 1 score: 194.9 bits; conditional E-value: 1.3e-60 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls+++k++vka w+k+ +a+e+G+eaLer + ++P+tk+yF++F dls gsa+vkahGkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v+a+ldk+++av+++l++kY - HBA_AILME 2 LSPADKTNVKATWDKIggHAGEYGGEALERTFASFPTTKTYFPHF-DLS-----PGSAQVKAHGKKVADALTTAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLASHHPAEFTPAVHASLDKFFSAVSTVLTSKY 140 - 799*************8889*************************.**9.....9****************************************************************************************** PP + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + lsa++k +vka+wgkv +a e+GaeaLer++ ++P+tk+yF++F dls +gsa+vk+hg+kv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls+ l+v+La+++p++ftp+v+a+ldk+la+v+++l++kY + HBA2_BOSMU 2 LSAADKGNVKAAWGKVggHAAEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGAKVAAALTKAVGHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVTLASHLPSDFTPAVHASLDKFLANVSTVLTSKY 140 + 79**************88899************************.**9.....******************************************************************************************* PP + +>> HBA_FRAPO + # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc + --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- + 1 ! 194.9 0.4 1.4e-60 1.4e-60 4 146 .. 2 140 .. 1 141 [] 0.98 + + Alignments for each domain: + == domain 1 score: 194.9 bits; conditional E-value: 1.4e-60 + xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + lsa++k++vk ++gk+ +a+++GaeaLer++++yP+tk+yF++F dls +gsa+vk+hgkkv++al ea +++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l+av n+l+akY + HBA_FRAPO 2 LSAADKNNVKGIFGKIssHAEDYGAEALERMFITYPSTKTYFPHF-DLS-----HGSAQVKGHGKKVVAALIEAANHIDDIAGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGNVLTAKY 140 + 89**************87799************************.**9.....******************************************************************************************* PP >> HBA2_GALCR # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 195.7 0.6 7.3e-61 7.3e-61 4 146 .. 2 140 .. 1 141 [] 0.98 - - Alignments for each domain: - == domain 1 score: 195.7 bits; conditional E-value: 7.3e-61 - xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls+++k++vka+w+kv +a+++GaeaLer++ ++P+tk+yF++F dls +gs++vk+hGkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfkll ++l+v+La+++p+eftp+v+a+ldk++a+v+++l++kY - HBA2_GALCR 2 LSPTDKSNVKAAWEKVgaHAGDYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSTQVKGHGKKVADALTNAVLHVDDMPSALSALSDLHAHKLRVDPVNFKLLRHCLLVTLACHHPAEFTPAVHASLDKFMASVSTVLTSKY 140 - 799*************77789************************.**9.....******************************************************************************************* PP - ->> HBA_FRAPO - # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc - --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 195.7 0.4 7.8e-61 7.8e-61 4 146 .. 2 140 .. 1 141 [] 0.98 + 1 ! 194.7 0.6 1.6e-60 1.6e-60 4 146 .. 2 140 .. 1 141 [] 0.98 Alignments for each domain: - == domain 1 score: 195.7 bits; conditional E-value: 7.8e-61 - xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - lsa++k++vk ++gk+ +a+++GaeaLer++++yP+tk+yF++F dls +gsa+vk+hGkkv++al ea +++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l+av n+l+akY - HBA_FRAPO 2 LSAADKNNVKGIFGKIssHAEDYGAEALERMFITYPSTKTYFPHF-DLS-----HGSAQVKGHGKKVVAALIEAANHIDDIAGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGNVLTAKY 140 - 79**************87799************************.**9.....******************************************************************************************* PP - ->> HBA_PHACO - # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc - --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 195.6 0.4 8e-61 8e-61 4 146 .. 2 140 .. 1 141 [] 0.99 - - Alignments for each domain: - == domain 1 score: 195.6 bits; conditional E-value: 8e-61 + == domain 1 score: 194.7 bits; conditional E-value: 1.6e-60 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - lsa++k++vk +++k+ +a+e+GaeaLer++++yP+tk+yF++F dls +gsa++k+hGkkv++al eav+++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l+av ++l+akY - HBA_PHACO 2 LSAADKNNVKGIFTKIagHAEEYGAEALERMFITYPSTKTYFPHF-DLS-----HGSAQIKGHGKKVVAALIEAVNHIDDITGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGTVLTAKY 140 - 79**************8889*************************.**9.....******************************************************************************************* PP - ->> HBA2_BOSMU - # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc - --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 195.6 0.4 8.3e-61 8.3e-61 4 146 .. 2 140 .. 1 141 [] 0.99 - - Alignments for each domain: - == domain 1 score: 195.6 bits; conditional E-value: 8.3e-61 - xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - lsa++k +vka+wgkv +a e+GaeaLer++ ++P+tk+yF++F dls +gsa+vk+hG+kv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls+ l+v+La+++p++ftp+v+a+ldk+la+v+++l++kY - HBA2_BOSMU 2 LSAADKGNVKAAWGKVggHAAEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGAKVAAALTKAVGHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVTLASHLPSDFTPAVHASLDKFLANVSTVLTSKY 140 - 79**************88899************************.**9.....******************************************************************************************* PP + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls+++k++vka+w+kv +a+++GaeaLer++ ++P+tk+yF++F dls +gs++vk+hgkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfkll ++l+v+La+++p+eftp+v+a+ldk++a+v+++l++kY + HBA2_GALCR 2 LSPTDKSNVKAAWEKVgaHAGDYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSTQVKGHGKKVADALTNAVLHVDDMPSALSALSDLHAHKLRVDPVNFKLLRHCLLVTLACHHPAEFTPAVHASLDKFMASVSTVLTSKY 140 + 799*************87789************************.**9.....******************************************************************************************* PP >> HBA_ERIEU # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 193.9 0.1 2.7e-60 2.7e-60 4 146 .. 2 140 .. 1 141 [] 0.98 + 1 ! 193.1 0.1 4.9e-60 4.9e-60 4 146 .. 2 140 .. 1 141 [] 0.98 Alignments for each domain: - == domain 1 score: 193.9 bits; conditional E-value: 2.7e-60 + == domain 1 score: 193.1 bits; conditional E-value: 4.9e-60 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - lsa++ka+vk+ wgk+ + +e+G+eaL r+++ +P+tk+yF++F dl+ gsa+vk+hGkkv++al++av++ldd+ gal++Ls+lHa+kl+vdp+nfklls++l+v+La ++p++ftp+v+a+ldk+la+va++l++kY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + lsa++ka+vk+ wgk+ + +e+G+eaL r+++ +P+tk+yF++F dl+ gsa+vk+hgkkv++al++av++ldd+ gal++Ls+lHa+kl+vdp+nfklls++l+v+La ++p++ftp+v+a+ldk+la+va++l++kY HBA_ERIEU 2 LSATDKANVKTFWGKLggHGGEYGGEALDRMFQAHPTTKTYFPHF-DLN-----PGSAQVKGHGKKVADALTTAVNNLDDVPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLALHHPADFTPAVHASLDKFLATVATVLTSKY 140 - 79**************77789************************.998.....9****************************************************************************************** PP + 79**************87789************************.998.....9****************************************************************************************** PP >> HBA_PROLO # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 193.5 0.0 3.6e-60 3.6e-60 4 146 .. 2 140 .. 1 141 [] 0.99 + 1 ! 192.9 0.0 5.6e-60 5.6e-60 4 146 .. 2 140 .. 1 141 [] 0.99 Alignments for each domain: - == domain 1 score: 193.5 bits; conditional E-value: 3.6e-60 + == domain 1 score: 192.9 bits; conditional E-value: 5.6e-60 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls+++ka++ka w+k+ +a+e+G+eaLer + ++P+tk+yF++F dls gsa+vkahGkkv++al+ av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v+a+ldk++++v+++l++kY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls+++ka++ka w+k+ +a+e+G+eaLer + ++P+tk+yF++F dls gsa+vkahgkkv++al+ av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v+a+ldk++++v+++l++kY HBA_PROLO 2 LSPADKANIKATWDKIggHAGEYGGEALERTFASFPTTKTYFPHF-DLS-----PGSAQVKAHGKKVADALTLAVGHLDDLPGALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPAEFTPAVHASLDKFFTSVSTVLTSKY 140 - 799*************8889*************************.**9.....9****************************************************************************************** PP + 799*************9889*************************.**9.....9****************************************************************************************** PP >> HBA_ANSSE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 193.2 0.4 4.3e-60 4.3e-60 4 146 .. 2 140 .. 1 141 [] 0.99 + 1 ! 192.3 0.4 8.1e-60 8.1e-60 4 146 .. 2 140 .. 1 141 [] 0.99 Alignments for each domain: - == domain 1 score: 193.2 bits; conditional E-value: 4.3e-60 + == domain 1 score: 192.3 bits; conditional E-value: 8.1e-60 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - lsa++k +vk+v+gk+ +a+e+Gae+L+r+++++P+tk+yF++F dl+ gsa++kahGkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfk+l+++++vvLa ++p+ +tpev+a++dk+l+ava++l+akY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + lsa++k +vk+v+gk+ +a+e+Gae+L+r+++++P+tk+yF++F dl+ gsa++kahgkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfk+l+++++vvLa ++p+ +tpev+a++dk+l+ava++l+akY HBA_ANSSE 2 LSAADKGNVKTVFGKIggHAEEYGAETLQRMFQTFPQTKTYFPHF-DLQ-----PGSAQIKAHGKKVAAALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKFLGHCFLVVLAIHHPSLLTPEVHASMDKFLCAVATVLTAKY 140 - 79**************8889*************************.998.....9****************************************************************************************** PP + 79**************988**************************.998.....9****************************************************************************************** PP >> HBA_PAGLA # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 193.2 0.5 4.5e-60 4.5e-60 4 146 .. 2 140 .. 1 141 [] 0.98 + 1 ! 192.3 0.5 8.1e-60 8.1e-60 4 146 .. 2 140 .. 1 141 [] 0.98 Alignments for each domain: - == domain 1 score: 193.2 bits; conditional E-value: 4.5e-60 + == domain 1 score: 192.3 bits; conditional E-value: 8.1e-60 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls+++k+++ka w+k+ +a+e+GaeaLer ++++P+tk+yF++F dls +gsa+vkahGkkv++al+ av +l+dl +al++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v++aldk+++av+++l++kY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls+++k+++ka w+k+ +a+e+GaeaLer ++++P+tk+yF++F dls +gsa+vkahgkkv++al+ av +l+dl +al++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v++aldk+++av+++l++kY HBA_PAGLA 2 LSSADKNNIKATWDKIgsHAGEYGAEALERTFISFPTTKTYFPHF-DLS-----HGSAQVKAHGKKVADALTLAVGHLEDLPNALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPAEFTPAVHSALDKFFSAVSTVLTSKY 140 - 799*************87799************************.**9.....******************************************************************************************* PP + 799*************88899************************.**9.....******************************************************************************************* PP >> HBA_TRIOC # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 190.5 0.5 2.9e-59 2.9e-59 4 146 .. 2 140 .. 1 141 [] 0.98 + 1 ! 189.8 0.5 5e-59 5e-59 4 146 .. 2 140 .. 1 141 [] 0.98 Alignments for each domain: - == domain 1 score: 190.5 bits; conditional E-value: 2.9e-59 + == domain 1 score: 189.8 bits; conditional E-value: 5e-59 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - lsa++k++vk+v++k+ +a+++Gae+Ler++++yP tk+yF++F dl +gsa++kahGkkv+ al eav+++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+ +tpev+a+ldk+l+av n+l+akY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + lsa++k++vk+v++k+ +a+++Gae+Ler++++yP tk+yF++F dl +gsa++kahgkkv+ al eav+++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+ +tpev+a+ldk+l+av n+l+akY HBA_TRIOC 2 LSANDKTNVKTVFTKItgHAEDYGAETLERMFITYPPTKTYFPHF-DLH-----HGSAQIKAHGKKVVGALIEAVNHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGQCFLVVVAIHHPSVLTPEVHASLDKFLCAVGNVLSAKY 140 89**************8889*************************.996.....******************************************************************************************* PP >> HBAD_CHLME # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 189.3 0.5 7e-59 7e-59 4 146 .. 2 140 .. 1 141 [] 0.98 + 1 ! 189.4 0.5 6.6e-59 6.6e-59 4 146 .. 2 140 .. 1 141 [] 0.98 Alignments for each domain: - == domain 1 score: 189.3 bits; conditional E-value: 7e-59 + == domain 1 score: 189.4 bits; conditional E-value: 6.6e-59 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - l+a++k+l++++w+kv +++e+G+eaL+r++ +yP+tk+yF++F dl gs++v++hGkkv++alg+avk+ld+l++al++Ls+lHa++l+vdp nfkll++++ vvLa++++k+++pe++aa+dk+l+ava++la+kY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + l+a++k+l++++w+kv +++e+G+eaL+r++ +yP+tk+yF++F dl gs++v++hgkkv++alg+avk+ld+l++al++Ls+lHa++l+vdp nfkll++++ vvLa++++k+++pe++aa+dk+l+ava++la+kY HBAD_CHLME 2 LTADDKKLLTQLWEKVagHQEEFGSEALQRMFLTYPQTKTYFPHF-DLH-----PGSEQVRGHGKKVAAALGNAVKSLDNLSQALSELSNLHAYNLRVDPANFKLLAQCFQVVLATHLGKDYSPEMHAAFDKFLSAVAAVLAEKY 140 89**************8889*************************.996.....9****************************************************************************************** PP >> HBAZ_HORSE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 189.1 0.1 8.2e-59 8.2e-59 4 146 .. 2 140 .. 1 141 [] 0.98 + 1 ! 187.5 0.1 2.5e-58 2.5e-58 4 146 .. 2 140 .. 1 141 [] 0.98 Alignments for each domain: - == domain 1 score: 189.1 bits; conditional E-value: 8.2e-59 + == domain 1 score: 187.5 bits; conditional E-value: 2.5e-58 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - l+++e+++v ++wgk+ +ad+vG+eaL+rl+ +yP+tk+yF++F dl +gs++++ahG+kv++a+g+avk++d+++galakLselHa+ l+vdp+nfk+ls++l+v+La+++p++ft++++aa+dk+l+ v+++l++kY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + l+++e+++v ++wgk+ +ad+vG+eaL+rl+ +yP+tk+yF++F dl +gs++++ahg+kv++a+g+avk++d+++galakLselHa+ l+vdp+nfk+ls++l+v+La+++p++ft++++aa+dk+l+ v+++l++kY HBAZ_HORSE 2 LTKAERTMVVSIWGKIsmQADAVGTEALQRLFSSYPQTKTYFPHF-DLH-----EGSPQLRAHGSKVAAAVGDAVKSIDNVAGALAKLSELHAYILRVDPVNFKFLSHCLLVTLASRLPADFTADAHAAWDKFLSIVSSVLTEKY 140 899*************66689************************.996.....9****************************************************************************************** PP ->> HBA_COLLI - # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc - --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 188.0 0.2 1.8e-58 1.8e-58 4 146 .. 2 140 .. 1 141 [] 0.98 - - Alignments for each domain: - == domain 1 score: 188.0 bits; conditional E-value: 1.8e-58 - xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - lsa++k++vkav+ k+ +a+++G+eaLerl+++yP+tk+yF++F dls +gsa++k+hGkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a +fp+ +tpev+a+ldk++ av ++l+akY - HBA_COLLI 2 LSANDKSNVKAVFAKIggQAGDLGGEALERLFITYPQTKTYFPHF-DLS-----HGSAQIKGHGKKVAEALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAKY 140 - 89**************77789************************.**9.....******************************************************************************************* PP - >> HBAD_PASMO # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 187.7 0.1 2.2e-58 2.2e-58 4 146 .. 2 140 .. 1 141 [] 0.98 + 1 ! 187.4 0.1 2.7e-58 2.7e-58 4 146 .. 2 140 .. 1 141 [] 0.98 + + Alignments for each domain: + == domain 1 score: 187.4 bits; conditional E-value: 2.7e-58 + xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + l+ae+k+l++++wgk+ ++e+Ga+aL r++++yP+tk+yF++F dls +gs+++++hgkkv++al++a+k+ld+l++al++Ls+lHa++l+vdp+nfk+ls++l v La++++ke++pev++a+dk+++ava++la+kY + HBAD_PASMO 2 LTAEDKKLIQQIWGKLggAEEEIGADALWRMFHSYPSTKTYFPHF-DLS-----QGSDQIRGHGKKVVAALSNAIKNLDNLSQALSELSNLHAYNLRVDPVNFKFLSQCLQVSLATRLGKEYSPEVHSAVDKFMSAVASVLAEKY 140 + 89**************65578************************.**9.....9****************************************************************************************** PP + +>> HBA_COLLI + # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc + --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- + 1 ! 187.4 0.2 2.8e-58 2.8e-58 4 146 .. 2 140 .. 1 141 [] 0.98 + + Alignments for each domain: + == domain 1 score: 187.4 bits; conditional E-value: 2.8e-58 + xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + lsa++k++vkav+ k+ +a+++G+eaLerl+++yP+tk+yF++F dls +gsa++k+hgkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a +fp+ +tpev+a+ldk++ av ++l+akY + HBA_COLLI 2 LSANDKSNVKAVFAKIggQAGDLGGEALERLFITYPQTKTYFPHF-DLS-----HGSAQIKGHGKKVAEALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAKY 140 + 89**************77799************************.**9.....******************************************************************************************* PP + +>> HBB2_TRICR + # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc + --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- + 1 ! 181.2 0.0 2.2e-56 2.2e-56 2 146 .. 1 145 [] 1 145 [] 1.00 Alignments for each domain: - == domain 1 score: 187.7 bits; conditional E-value: 2.2e-58 + == domain 1 score: 181.2 bits; conditional E-value: 2.2e-56 + xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF + sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + vhl+ae++++++a++gkv++d++G+++L+rl+vv+P+++ryF++Fgdlss+da+++++kv ahg+kv++++ ea+k+ld+l++ +a+Ls +H+ k+ vdpenfkl+s +++v+La +++++f+++ q a++kl+++v++al++ Y + HBB2_TRICR 1 VHLTAEDRKEIAAILGKVNVDSLGGQCLARLIVVNPWSRRYFHDFGDLSSCDAICRNPKVLAHGAKVMRSIVEATKHLDNLREYYADLSVTHSLKFYVDPENFKLFSGIVIVCLALTLQTDFSCHKQLAFEKLMKGVSHALGHGY 145 + 8**********************************************************************************************************************************************99 PP + +>> HBA4_SALIR + # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc + --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- + 1 ! 179.8 0.1 5.8e-56 5.8e-56 4 146 .. 2 141 .. 1 142 [] 0.98 + + Alignments for each domain: + == domain 1 score: 179.8 bits; conditional E-value: 5.8e-56 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - l+ae+k+l++++wgk+ ++e+Ga+aL r++++yP+tk+yF++F dls +gs+++++hGkkv++al++a+k+ld+l++al++Ls+lHa++l+vdp+nfk+ls++l v La++++ke++pev++a+dk+++ava++la+kY - HBAD_PASMO 2 LTAEDKKLIQQIWGKLggAEEEIGADALWRMFHSYPSTKTYFPHF-DLS-----QGSDQIRGHGKKVVAALSNAIKNLDNLSQALSELSNLHAYNLRVDPVNFKFLSQCLQVSLATRLGKEYSPEVHSAVDKFMSAVASVLAEKY 140 - 89**************65478************************.**9.....9****************************************************************************************** PP + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + lsa++ka+vka+wgk+ ++de+G++aL+r+lvvyP+tk yF+++++++ gsa vk+hg +++++++++v ++ddl g l+kLselHatkl+vdp+nfk+l++ l+vv+aa fp+eftpe++ ++dk+l+++a ala+kY + HBA4_SALIR 2 LSAKDKANVKAIWGKIlpKSDEIGEQALSRMLVVYPQTKAYFSHWASVA-----PGSAPVKKHGITIMNQIDDCVGHMDDLFGFLTKLSELHATKLRVDPTNFKILAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALALAEKY 141 + 89**************999**************************7765.....9****************************************************************************************** PP + +>> MYG_LYCPI + # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc + --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- + 1 ! 179.0 1.8 1.1e-55 1.1e-55 4 146 .. 2 146 .. 1 147 [. 0.97 + + Alignments for each domain: + == domain 1 score: 179.0 bits; conditional E-value: 1.1e-55 + xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls+ e++ v ++wgkve+d +G +e+L+rl++++Pet ++FdkF++l++ed++kgs+++k+hg++vltalg ++kk+++++++l++L+++Hatk+k+++++++++s+++++vL++k++++f+++++aa++k+l++++n++aakY + MYG_LYCPI 2 LSDGEWQIVLNIWGKVETDLAGhgQEVLIRLFKNHPETLDKFDKFKHLKTEDEMKGSEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPVKYLEFISDAIIQVLQNKHSGDFHADTEAAMKKALELFRNDIAAKY 146 + 7889************99966544************************************************************************************************************************* PP >> MYG_SAISC # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 183.9 1.0 3.2e-57 3.2e-57 4 146 .. 2 146 .. 1 147 [. 0.98 + 1 ! 178.6 1.0 1.4e-55 1.4e-55 4 146 .. 2 146 .. 1 147 [. 0.98 Alignments for each domain: - == domain 1 score: 183.9 bits; conditional E-value: 3.2e-57 + == domain 1 score: 178.6 bits; conditional E-value: 1.4e-55 xxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkvead..evGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls+ e++lv ++wgkvead ++G+e+L+ l++ +Pet ++FdkFk+l+sed++k+s+++k+hG++vltalg ++kk+++++++l++L+++Hatk+k+++++++l+s+++v+vL++k+p++f++++q a++k+l++++n++aakY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkvead..evGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls+ e++lv ++wgkvead ++G+e+L+ l++ +Pet ++FdkF++l+sed++k+s+++k+hg++vltalg ++kk+++++++l++L+++Hatk+k+++++++l+s+++v+vL++k+p++f++++q a++k+l++++n++aakY MYG_SAISC 2 LSDGEWQLVLNIWGKVEADipSHGQEVLISLFKGHPETLEKFDKFKHLKSEDEMKASEELKKHGTTVLTALGGILKKKGQHEAELKPLAQSHATKHKIPVKYLELISDAIVHVLQKKHPGDFGADAQGAMKKALELFRNDMAAKY 146 - 7889************9998899************************************************************************************************************************** PP - ->> MYG_LYCPI + 7899************9998899************************************************************************************************************************** PP + +>> MYG_ESCGI # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 183.9 1.9 3.3e-57 3.3e-57 4 146 .. 2 146 .. 1 147 [. 0.97 + 1 ! 177.3 2.2 3.4e-55 3.4e-55 4 146 .. 2 146 .. 1 147 [. 0.97 Alignments for each domain: - == domain 1 score: 183.9 bits; conditional E-value: 3.3e-57 + == domain 1 score: 177.3 bits; conditional E-value: 3.4e-55 xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls+ e++ v ++wgkve+d +G +e+L+rl++++Pet ++FdkFk+l++ed++kgs+++k+hG++vltalg ++kk+++++++l++L+++Hatk+k+++++++++s+++++vL++k++++f+++++aa++k+l++++n++aakY - MYG_LYCPI 2 LSDGEWQIVLNIWGKVETDLAGhgQEVLIRLFKNHPETLDKFDKFKHLKTEDEMKGSEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPVKYLEFISDAIIQVLQNKHSGDFHADTEAAMKKALELFRNDIAAKY 146 - 7889************99966444************************************************************************************************************************* PP + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls++e++lv ++w kvead +G +++L+rl++ +Pet ++FdkF++l++e+++k+s+++k+hg++vltalg ++kk+++++++l++L+++Hatk+k+++++++++s+++++vL++++p++f++++qaa++k+l+++++++aakY + MYG_ESCGI 2 LSDAEWQLVLNIWAKVEADVAGhgQDILIRLFKGHPETLEKFDKFKHLKTEAEMKASEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSRHPGDFGADAQAAMNKALELFRKDIAAKY 146 + 7999************99866444************************************************************************************************************************* PP >> MYG_PROGU # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 182.4 0.2 9.2e-57 9.2e-57 4 146 .. 2 146 .. 1 147 [. 0.97 + 1 ! 176.6 0.2 5.7e-55 5.7e-55 4 146 .. 2 146 .. 1 147 [. 0.97 Alignments for each domain: - == domain 1 score: 182.4 bits; conditional E-value: 9.2e-57 + == domain 1 score: 176.6 bits; conditional E-value: 5.7e-55 xxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkvead..evGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls+ e++lv +vwgkve d +G+e+L+rl++ +Pet ++FdkFk+l++ed++++s+++k+hG++vltalg ++kk+++++++la+L+++Hatk+k+++++++++se++++vL++k+p++f++++q a++k+l++++n++aakY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkvead..evGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls+ e++lv +vwgkve d +G+e+L+rl++ +Pet ++FdkF++l++ed++++s+++k+hg++vltalg ++kk+++++++la+L+++Hatk+k+++++++++se++++vL++k+p++f++++q a++k+l++++n++aakY MYG_PROGU 2 LSDGEWQLVLNVWGKVEGDlsGHGQEVLIRLFKGHPETLEKFDKFKHLKAEDEMRASEELKKHGTTVLTALGGILKKKGQHAAELAPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDIAAKY 146 - 7889************98833557************************************************************************************************************************* PP - ->> MYG_ESCGI - # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc - --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 182.4 2.3 9.7e-57 9.7e-57 4 146 .. 2 146 .. 1 147 [. 0.97 - - Alignments for each domain: - == domain 1 score: 182.4 bits; conditional E-value: 9.7e-57 - xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls++e++lv ++w kvead +G +++L+rl++ +Pet ++FdkFk+l++e+++k+s+++k+hG++vltalg ++kk+++++++l++L+++Hatk+k+++++++++s+++++vL++++p++f++++qaa++k+l+++++++aakY - MYG_ESCGI 2 LSDAEWQLVLNIWAKVEADVAGhgQDILIRLFKGHPETLEKFDKFKHLKTEAEMKASEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSRHPGDFGADAQAAMNKALELFRKDIAAKY 146 - 7999************99966444************************************************************************************************************************* PP + 7899************98833567************************************************************************************************************************* PP >> MYG_HORSE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 180.9 1.0 2.7e-56 2.7e-56 4 146 .. 2 146 .. 1 147 [. 0.97 + 1 ! 175.8 1.0 1e-54 1e-54 4 146 .. 2 146 .. 1 147 [. 0.97 Alignments for each domain: - == domain 1 score: 180.9 bits; conditional E-value: 2.7e-56 + == domain 1 score: 175.8 bits; conditional E-value: 1e-54 xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls+ e+++v +vwgkvead +G +e+L+rl++ +Pet ++FdkFk+l++e+++k+s+++k+hG+ vltalg ++kk+++++++l++L+++Hatk+k+++++++++s+++++vL++k+p++f++++q a++k+l++++n++aakY + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls+ e+++v +vwgkvead +G +e+L+rl++ +Pet ++FdkF++l++e+++k+s+++k+hg+ vltalg ++kk+++++++l++L+++Hatk+k+++++++++s+++++vL++k+p++f++++q a++k+l++++n++aakY MYG_HORSE 2 LSDGEWQQVLNVWGKVEADIAGhgQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSKHPGNFGADAQGAMTKALELFRNDIAAKY 146 - 7889************99965444************************************************************************************************************************* PP + 7899************99965444************************************************************************************************************************* PP >> MYG_MOUSE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 180.0 0.3 5.2e-56 5.2e-56 4 146 .. 2 146 .. 1 147 [. 0.97 - - Alignments for each domain: - == domain 1 score: 180.0 bits; conditional E-value: 5.2e-56 - xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ls+ e++lv +vwgkvead +G +e+L+ l++++Pet ++FdkFk+l+se+++kgs+++k+hG +vltalg+++kk++++++++++L+++Hatk+k+++++++++se+++ vL+++++++f++++q a++k+l++++n++aakY - MYG_MOUSE 2 LSDGEWQLVLNVWGKVEADLAGhgQEVLIGLFKTHPETLDKFDKFKNLKSEEDMKGSEDLKKHGCTVLTALGTILKKKGQHAAEIQPLAQSHATKHKIPVKYLEFISEIIIEVLKKRHSGDFGADAQGAMSKALELFRNDIAAKY 146 - 7889*************9976544************************************************************************************************************************* PP - ->> HBA4_SALIR - # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc - --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 179.3 0.1 8.3e-56 8.3e-56 4 146 .. 2 141 .. 1 142 [] 0.98 + 1 ! 175.2 0.3 1.6e-54 1.6e-54 4 146 .. 2 146 .. 1 147 [. 0.97 Alignments for each domain: - == domain 1 score: 179.3 bits; conditional E-value: 8.3e-56 - xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - lsa++ka+vka+wgk+ ++de+G++aL+r+lvvyP+tk yF+++++++ gsa vk+hG +++++++++v ++ddl g l+kLselHatkl+vdp+nfk+l++ l+vv+aa fp+eftpe++ ++dk+l+++a ala+kY - HBA4_SALIR 2 LSAKDKANVKAIWGKIlpKSDEIGEQALSRMLVVYPQTKAYFSHWASVA-----PGSAPVKKHGITIMNQIDDCVGHMDDLFGFLTKLSELHATKLRVDPTNFKILAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALALAEKY 141 - 89**************999**************************7765.....9****************************************************************************************** PP - ->> HBB2_TRICR - # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc - --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 177.5 0.0 3e-55 3e-55 2 146 .. 1 145 [] 1 145 [] 1.00 - - Alignments for each domain: - == domain 1 score: 177.5 bits; conditional E-value: 3e-55 - xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - vhl+ae++++++a++gkv++d++G+++L+rl+vv P+++ryF++F+dlss+da+++++kv ahG+kv++++ ea k+ld+l++ +a+Ls +H+ k+ vdpenfkl+s +++v+La +++++f+++ q a++kl+++v++al++ Y - HBB2_TRICR 1 VHLTAEDRKEIAAILGKVNVDSLGGQCLARLIVVNPWSRRYFHDFGDLSSCDAICRNPKVLAHGAKVMRSIVEATKHLDNLREYYADLSVTHSLKFYVDPENFKLFSGIVIVCLALTLQTDFSCHKQLAFEKLMKGVSHALGHGY 145 - 8**********************************************************************************************************************************************99 PP + == domain 1 score: 175.2 bits; conditional E-value: 1.6e-54 + xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF + sp|P02024|HBB_GORGO-i1 4 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ls+ e++lv +vwgkvead +G +e+L+ l++++Pet ++FdkF++l+se+++kgs+++k+hg +vltalg+++kk++++++++++L+++Hatk+k+++++++++se+++ vL+++++++f++++q a++k+l++++n++aakY + MYG_MOUSE 2 LSDGEWQLVLNVWGKVEADLAGhgQEVLIGLFKTHPETLDKFDKFKNLKSEEDMKGSEDLKKHGCTVLTALGTILKKKGQHAAEIQPLAQSHATKHKIPVKYLEFISEIIIEVLKKRHSGDFGADAQGAMSKALELFRNDIAAKY 146 + 7899*************9966544************************************************************************************************************************* PP >> MYG_MUSAN # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- - 1 ! 144.3 0.3 5.1e-45 5.1e-45 8 146 .. 2 141 .. 1 142 [. 0.96 + 1 ! 142.6 0.3 1.8e-44 1.8e-44 8 146 .. 2 141 .. 1 142 [. 0.96 Alignments for each domain: - == domain 1 score: 144.3 bits; conditional E-value: 5.1e-45 + == domain 1 score: 142.6 bits; conditional E-value: 1.8e-44 xxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF - sp|P02024|HBB_GORGO-i1 8 ekalvkavwgkvead..evGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 - ++++v++vw+ ve+d ++G+++L rl+++yPe++++F+kFk++s ++k++a++ka++++vl+alg++vkk++++++ +++L+++H+t++k++p++f+ ++++ v vL++++p+e++++vqaa++ +++ + +++ ++Y + sp|P02024|HBB_GORGO-i1 8 ekalvkavwgkvead..evGaeaLerllvvyPetkryFdkFgdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146 + ++++v++vw+ ve+d ++G+++L rl+++yPe++++F+kF+++s ++k++a++ka++++vl+alg++vkk++++++ +++L+++H+t++k++p++f+ ++++ v vL++++p+e++++vqaa++ +++ + +++ ++Y MYG_MUSAN 2 DWEKVNSVWSAVESDltAIGQNILLRLFEQYPESQNHFPKFKNKS-LGELKDTADIKAQADTVLSALGNIVKKKGSHSQPVKALAATHITTHKIPPHYFTKITTIAVDVLSEMYPSEMNAQVQAAFSGAFKIICSDIEKEY 141 - 7899********9886689**********************9998.667****************************************************************************************9999 PP + 7899********9886699**********************9998.667****************************************************************************************9999 PP @@ -3211,8 +3209,8 @@ Passed Fwd filter: 45 (1); expected 0.0 (1e-05) Initial search space (Z): 45 [actual number of targets] Domain search space (domZ): 45 [number of targets reported over threshold] -# CPU time: 0.17u 0.00s 00:00:00.17 Elapsed: 00:00:00.17 -# Mc/sec: 5.33 +# CPU time: 0.22u 0.00s 00:00:00.22 Elapsed: 00:00:00.24 +# Mc/sec: 3.96 @@ New targets included: 0 @@ New alignment includes: 46 subseqs (was 46), including original query