changeset 4:be0cc39776f9 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7c3ac4ad5a64b737e1b8f73c522e006097596f1d
author iuc
date Mon, 11 Jun 2018 15:52:05 -0400
parents c8e81e43bff1
children b4fe2f703b4b
files macros.xml test-data/MADE1.hmm test-data/MADE1.nhmmscan_out test-data/MADE1.nhmmscan_out.aliscoresout test-data/MADE1.nhmmscan_out.dfamtblout test-data/MADE1.nhmmscan_out.tblout test-data/MADE1.out test-data/MADE1.out.domtblout test-data/MADE1.out.pfamtblout test-data/MADE1.out.tblout test-data/fn3.hmm test-data/globins-masked.sto test-data/globins.domtblout test-data/globins.pfamtblout test-data/globins.tblout test-data/globins4-emit-1.sto test-data/globins4-emit.sto test-data/globins4.hmm test-data/globins4.hmm2 test-data/jackhmmer.domtblout test-data/jackhmmer.out test-data/jackhmmer.tblout test-data/nhmmer.out test-data/nhmmer.out.dfamtblout test-data/nhmmer.out.tblout test-data/phmmer.domtblout test-data/phmmer.out test-data/phmmer.pfamtblout test-data/phmmer.tblout test-data/uniprot_globins_match.out
diffstat 30 files changed, 2033 insertions(+), 2031 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Sat Apr 07 03:50:51 2018 -0400
+++ b/macros.xml	Mon Jun 11 15:52:05 2018 -0400
@@ -6,7 +6,7 @@
       <yield/>
     </requirements>
   </xml>
-  <token name="@TOOL_VERSION@">3.1b2</token>
+  <token name="@TOOL_VERSION@">3.2</token>
   <xml name="stdio">
     <stdio>
       <!-- Anything other than zero is an error -->
--- a/test-data/MADE1.hmm	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/MADE1.hmm	Mon Jun 11 15:52:05 2018 -0400
@@ -1,264 +1,267 @@
-HMMER3/f [3.1b2 | February 2015]
+HMMER3/f [3.2 | June 2018]
 NAME  MADE1
 ACC   DF0000629.2
 DESC  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
 LENG  80
-MAXL  425
+MAXL  369
 ALPH  DNA
 RF    yes
 MM    no
 CONS  yes
 CS    no
 MAP   yes
-DATE  Sat Jun 25 17:24:24 2016
+DATE  Fri Jun  8 12:16:29 2018
 NSEQ  1997
 EFFN  3.911818
 CKSUM 3015610723
+GA    15.98
+TC    32.00
+NC    15.90
 STATS LOCAL MSV       -8.5408  0.71858
-STATS LOCAL VITERBI   -9.6224  0.71858
-STATS LOCAL FORWARD   -3.4150  0.71858
+STATS LOCAL VITERBI   -9.6095  0.71858
+STATS LOCAL FORWARD   -3.4185  0.71858
 HMM          A        C        G        T   
             m->m     m->i     m->d     i->m     i->i     d->m     d->d
-  COMPO   1.24533  1.59094  1.62722  1.16493
+  COMPO   1.24273  1.59618  1.63103  1.16152
           1.38629  1.38629  1.38629  1.38629
-          0.21058  4.11281  1.75146  1.46634  0.26236  0.00000        *
+          0.03960  3.94183  3.94183  1.46634  0.26236  0.00000        *
       1   2.69765  2.44396  2.81521  0.24089      1 t x - -
           1.38629  1.38629  1.38629  1.38629
-          0.03960  3.94183  3.94183  1.46634  0.26236  1.10301  0.40327
+          0.03960  3.94183  3.94183  1.46634  0.26236  1.09861  0.40547
       2   2.72939  2.37873  2.85832  0.24244      2 t x - -
           1.38629  1.38629  1.38629  1.38629
-          0.03725  4.00179  4.00179  1.46634  0.26236  1.21367  0.35255
+          0.03725  4.00179  4.00179  1.46634  0.26236  1.09861  0.40547
       3   0.16099  3.16370  2.87328  2.99734      3 a x - -
           1.38629  1.38629  1.38629  1.38629
-          0.03604  4.03416  4.03416  1.46634  0.26236  1.32877  0.30762
+          0.03604  4.03416  4.03416  1.46634  0.26236  1.09861  0.40547
       4   1.98862  2.42132  0.42649  2.10770      4 g x - -
           1.38629  1.38629  1.38629  1.38629
-          0.03539  4.05203  4.05203  1.46634  0.26236  1.35213  0.29933
+          0.03539  4.05203  4.05203  1.46634  0.26236  1.09861  0.40547
       5   1.96369  2.69532  0.36534  2.32099      5 g x - -
           1.38629  1.38629  1.38629  1.38629
-          0.03764  4.06427  3.92372  1.46634  0.26236  1.00259  0.45717
+          0.03764  4.06427  3.92372  1.46634  0.26236  1.09861  0.40547
       6   2.56994  2.11239  2.71946  0.30571      6 t x - -
           1.37159  1.41129  1.39124  1.37159
-          0.03806  3.89715  4.07214  1.50442  0.25122  1.12269  0.39364
+          0.03806  3.89715  4.07214  1.48830  0.25587  1.07889  0.41548
       7   2.58388  2.10353  2.64646  0.31253     12 t x - -
           1.38764  1.38524  1.38764  1.38465
-          0.03494  4.03864  4.09125  1.40070  0.28293  1.44046  0.27026
+          0.03494  4.03864  4.09125  1.43264  0.27270  1.09736  0.40609
       8   2.18552  2.70201  0.28821  2.64645     14 g x - -
           1.38629  1.38629  1.38629  1.38629
-          0.03628  4.09157  3.96779  1.46634  0.26236  1.26997  0.32967
+          0.03628  4.09157  3.96779  1.46634  0.26236  1.09861  0.40547
       9   2.16916  2.82142  0.28427  2.60854     15 g x - -
           1.38091  1.39033  1.38365  1.39033
-          0.03566  4.00237  4.08886  1.38021  0.28972  1.26961  0.32981
+          0.03566  4.00237  4.08886  1.42105  0.27636  1.08174  0.41401
      10   2.45517  2.15232  2.42886  0.34277     18 t x - -
           1.39065  1.39065  1.39065  1.37335
-          0.03536  4.01212  4.09576  1.39554  0.28462  1.25024  0.33748
+          0.03536  4.01212  4.09576  1.42916  0.27379  1.09844  0.40555
      11   2.10260  2.95484  0.28160  2.64222     21 g x - -
           1.36740  1.40555  1.40555  1.36740
-          0.03843  3.92069  4.02468  1.44733  0.26814  1.15789  0.37709
+          0.03843  3.92069  4.02468  1.45555  0.26562  1.09860  0.40547
      12   2.54740  0.30185  2.61355  2.21647     26 c x - -
           1.38748  1.38276  1.38748  1.38748
-          0.03457  4.05446  4.09623  1.40847  0.28040  1.17686  0.36852
+          0.03457  4.05446  4.09623  1.43672  0.27142  1.08954  0.41003
      13   0.28443  2.72003  2.32214  2.48149     28 a x - -
           1.38740  1.38740  1.38298  1.38740
-          0.03441  4.05976  4.10001  1.41198  0.27926  0.97690  0.47237
+          0.03441  4.05976  4.10001  1.43856  0.27085  1.09845  0.40555
      14   0.29412  2.55413  2.49679  2.35701     30 a x - -
           1.38194  1.39067  1.38194  1.39067
-          0.03505  4.02482  4.10005  1.39522  0.28473  1.16906  0.37202
+          0.03505  4.02482  4.10005  1.42899  0.27385  1.09875  0.40540
      15   0.18837  2.99710  2.82270  2.77556     33 a x - -
           1.39015  1.39472  1.37503  1.38539
-          0.03725  3.97815  4.02618  1.37955  0.28994  1.16870  0.37218
+          0.03725  3.97815  4.02618  1.41936  0.27690  1.09910  0.40522
      16   0.50816  2.05151  2.22111  1.82407     37 a x - -
           1.36727  1.38730  1.39683  1.39405
-          0.04830  3.89881  3.61610  1.29026  0.32186  1.08301  0.41336
+          0.04830  3.89881  3.61610  1.36783  0.29391  1.08909  0.41026
      17   2.11260  2.73141  0.29747  2.64152     41 g x - -
           1.36913  1.40376  1.40376  1.36913
-          0.03705  3.93681  4.08299  1.44872  0.26771  1.09472  0.40742
+          0.03705  3.93681  4.08299  1.45644  0.26535  1.09300  0.40828
      18   2.24459  1.90539  2.34054  0.43234     46 t x - -
           1.33632  1.42493  1.39937  1.38665
-          0.04427  3.64574  4.06297  1.70501  0.20061  1.19872  0.35894
+          0.04427  3.64574  4.06297  1.63077  0.21788  1.12291  0.39354
      19   0.44322  2.17202  2.18055  2.03175     57 a x - -
           1.41047  1.41471  1.36338  1.35797
-          0.03970  3.81957  4.07540  1.65588  0.21186  1.24390  0.34004
+          0.03970  3.81957  4.07540  1.58572  0.22916  1.12604  0.39203
      20   0.33340  2.42691  2.40824  2.25160     66 a x - -
           1.29389  1.44615  1.37917  1.43324
-          0.04223  3.70146  4.09459  1.55158  0.23815  1.01872  0.44794
+          0.04223  3.70146  4.09459  1.52224  0.24619  1.08955  0.41003
      21   2.50563  1.98543  2.69600  0.33746     74 t x - -
           1.39462  1.39462  1.42862  1.32990
-          0.04184  3.80216  3.98177  1.80466  0.17976  1.00279  0.45705
+          0.04184  3.80216  3.98177  1.68754  0.20454  1.07729  0.41630
      22   2.54484  1.97505  2.66483  0.33806     84 t x - -
           1.39134  1.39489  1.38662  1.37246
-          0.03877  3.97504  3.95038  1.37620  0.29107  1.13932  0.38572
+          0.03877  3.97504  3.95038  1.41745  0.27751  1.10706  0.40127
      23   2.10159  2.83856  0.29282  2.61635     88 g x - -
           1.39682  1.39682  1.35536  1.39682
-          0.05046  3.75402  3.65808  1.08330  0.41321  1.13019  0.39004
+          0.05046  3.75402  3.65808  1.24245  0.34063  1.10542  0.40208
      24   2.25298  0.61854  2.50691  1.29221     90 c x - -
           1.35803  1.49605  1.46737  1.24379
-          0.06091  3.28322  3.83564  1.89752  0.16245  1.28788  0.32276
+          0.06091  3.28322  3.83564  1.80825  0.17906  1.14129  0.38479
      25   1.27819  2.23285  0.76242  1.91259    106 g x - -
           1.29024  1.67349  1.68279  1.04597
-          0.05752  3.44263  3.73311  2.58671  0.07825  1.26818  0.33037
+          0.05752  3.44263  3.73311  2.37512  0.09762  1.13899  0.38587
      26   1.86925  2.58352  0.39466  2.33986    131 g x - -
           1.31084  1.49412  1.46666  1.29002
-          0.04698  3.54257  4.07715  2.25245  0.11109  0.86163  0.54900
+          0.04698  3.54257  4.07715  2.06694  0.13533  1.02968  0.44180
      27   2.38297  1.93394  2.39162  0.39800    151 t x - -
           1.33582  1.47359  1.44163  1.30411
-          0.04951  3.48445  4.03783  2.15951  0.12260  1.21681  0.35122
+          0.04951  3.48445  4.03783  2.00196  0.14511  1.12431  0.39286
      28   2.41717  2.17810  2.62774  0.32113    170 t x - -
           1.36805  1.48060  1.37439  1.32840
-          0.04849  3.50958  4.05014  2.58370  0.07850  1.22399  0.34822
+          0.04849  3.50958  4.05014  2.35966  0.09922  1.12592  0.39208
      29   2.57764  2.35132  2.56552  0.28512    194 t x - -
           1.43829  1.43458  1.24787  1.43829
-          0.04667  3.56670  4.05428  2.49706  0.08591  1.23744  0.34267
+          0.04667  3.56670  4.05428  2.27140  0.10889  1.12876  0.39073
      30   2.47248  2.07688  2.62257  0.33172    215 t x - -
           1.25120  1.52623  1.70635  1.15531
-          0.08932  3.31524  3.01336  2.81842  0.06156  1.22909  0.34610
+          0.08932  3.31524  3.01336  2.61336  0.07611  1.12714  0.39150
      31   2.25937  2.13157  2.02027  0.43957    248 t x - -
           1.18172  1.43522  1.72841  1.28150
-          0.07936  2.93117  3.77395  2.46269  0.08906  0.60457  0.79034
+          0.07936  2.93117  3.77395  2.34189  0.10109  0.91545  0.51138
      32   2.04508  2.84981  0.30490  2.58263    280 g x - -
           1.17665  1.66785  1.66218  1.16056
-          0.05998  3.23615  3.96853  2.83684  0.06040  1.01952  0.44749
+          0.05998  3.23615  3.96853  2.64545  0.07362  1.07884  0.41550
      33   2.45103  0.38098  2.56776  1.87147    317 c x - -
           1.24153  1.52524  1.60663  1.22783
-          0.05538  3.39046  3.90294  2.73920  0.06680  1.18729  0.36391
+          0.05538  3.39046  3.90294  2.52486  0.08346  1.11838  0.39573
      34   2.22082  0.36258  2.75077  2.02704    347 c x - -
           1.15008  1.62014  1.86511  1.10673
-          0.06086  3.18178  4.04341  2.94504  0.05403  1.25991  0.33363
+          0.06086  3.18178  4.04341  2.75736  0.06556  1.13451  0.38799
      35   0.27033  2.66664  2.52541  2.43767    388 a x - -
           1.24951  1.47565  1.41392  1.42074
-          0.07123  3.00373  3.95552  3.13655  0.04440  1.28173  0.32512
+          0.07123  3.00373  3.95552  2.97118  0.05260  1.13905  0.38584
      36   2.83107  2.41670  2.97197  0.22235    439 t x - -
           1.37071  1.57683  1.38637  1.23972
-          0.05293  3.45216  3.91807  2.54402  0.08181  1.14651  0.38235
+          0.05293  3.45216  3.91807  2.33621  0.10169  1.11003  0.39980
      37   2.52322  2.25084  2.45909  0.31611    465 t x - -
           1.26335  1.55077  1.59008  1.19965
-          0.07504  3.13329  3.55006  3.08962  0.04659  1.13108  0.38962
+          0.07504  3.13329  3.55006  2.90286  0.05643  1.10636  0.40161
      38   0.45807  2.30687  1.98940  2.03143    512 a x - -
           1.15472  1.67511  1.53797  1.26320
-          0.09820  3.13076  2.99876  2.79197  0.06326  1.39915  0.28343
+          0.09820  3.13076  2.99876  2.62156  0.07547  1.16981  0.37168
      39   2.37471  0.42180  2.44763  1.80427    550 c x - -
           1.23785  1.49058  1.48364  1.35502
-          0.06081  3.19472  4.01643  2.41851  0.09327  0.94671  0.49105
+          0.06081  3.19472  4.01643  2.26388  0.10975  1.04403  0.43391
      40   2.32826  1.95481  2.36781  0.40458    578 t x - -
           1.36586  1.46001  1.43000  1.29720
-          0.05257  3.39673  4.03256  1.84862  0.17133  1.40979  0.27997
+          0.05257  3.39673  4.03256  1.75730  0.18936  1.17882  0.36765
      41   2.68669  2.13935  2.81520  0.28200    592 t x - -
           1.34965  1.42793  1.45781  1.31633
-          0.04735  3.57826  3.99988  2.09424  0.13144  1.22129  0.34934
+          0.04735  3.57826  3.99988  1.93109  0.15664  1.13176  0.38929
      42   2.55904  2.16444  2.70859  0.29952    609 t x - -
           1.12072  1.61936  1.63578  1.26895
-          0.07346  3.25910  3.42962  2.85641  0.05919  1.38363  0.28857
+          0.07346  3.25910  3.42962  2.65714  0.07273  1.16768  0.37264
      43   1.99923  1.61027  2.26343  0.57851    646 t x - -
           1.32290  1.58747  1.61095  1.11018
-          0.06656  3.08568  3.97944  2.44774  0.09046  0.75593  0.63407
+          0.06656  3.08568  3.97944  2.30872  0.10468  0.98144  0.46964
      44   0.23887  2.79899  2.55209  2.60783    675 a x - -
           1.18557  1.50323  1.59070  1.31590
-          0.05597  3.38637  3.88222  2.46900  0.08847  1.27945  0.32599
+          0.05597  3.38637  3.88222  2.28298  0.10756  1.13989  0.38545
      45   0.29593  2.53488  2.53903  2.32335    701 a x - -
           1.08710  1.54222  1.59276  1.40430
-          0.07539  2.94521  3.91062  1.91623  0.15918  1.22327  0.34852
+          0.07539  2.94521  3.91062  1.84934  0.17119  1.12860  0.39080
      46   2.58352  2.40524  2.76700  0.25955    725 t x - -
           1.19685  1.58503  1.74852  1.14293
-          0.06124  3.18279  4.02089  2.82961  0.06085  1.05474  0.42814
+          0.06124  3.18279  4.02089  2.64816  0.07341  1.08734  0.41115
      47   2.13251  2.88788  0.29508  2.50964    764 g x - -
           1.20891  1.55463  1.68206  1.19000
-          0.06526  3.12574  3.94910  2.41448  0.09367  1.10396  0.40280
+          0.06526  3.12574  3.94910  2.27651  0.10830  1.09988  0.40483
      48   2.23841  2.99164  0.25118  2.72900    792 g x - -
           1.26330  1.55339  1.52606  1.24355
-          0.05464  3.34968  4.01313  2.78872  0.06347  1.15133  0.38012
+          0.05464  3.34968  4.01313  2.57858  0.07891  1.11066  0.39949
      49   2.57533  0.32900  2.64632  2.01501    824 c x - -
           1.35118  1.39828  1.40141  1.39516
-          0.04340  3.79297  3.91506  1.59549  0.22666  1.20075  0.35806
+          0.04340  3.79297  3.91506  1.54788  0.23914  1.12122  0.39435
      50   0.46433  2.04127  2.23437  2.00605    833 a x - -
           1.23062  1.36903  1.62282  1.36182
-          0.05764  3.31530  3.92762  2.28791  0.10700  1.07910  0.41536
+          0.05764  3.31530  3.92762  2.13660  0.12563  1.09396  0.40780
      51   0.27513  2.77017  2.28518  2.57549    853 a x - -
           1.27958  1.58726  1.46109  1.25394
-          0.05750  3.30072  3.96214  2.60776  0.07656  1.25708  0.33475
+          0.05750  3.30072  3.96214  2.42368  0.09277  1.13333  0.38855
      52   0.20149  2.86434  2.84551  2.69770    883 a x - -
           1.23645  1.62259  1.71174  1.10368
-          0.05756  3.26729  4.02702  2.54508  0.08172  1.27391  0.32814
+          0.05756  3.26729  4.02702  2.37267  0.09787  1.13770  0.38648
      53   0.26982  2.65833  2.50477  2.46835    911 a x - -
           1.36005  1.50358  1.48100  1.22550
-          0.06921  3.37553  3.42118  2.36646  0.09851  1.27560  0.32748
+          0.06921  3.37553  3.42118  2.19529  0.11802  1.13826  0.38622
      54   0.40022  2.19284  2.22687  2.20396    934 a x - -
           1.12070  1.60472  1.53213  1.35895
-          0.05523  3.36752  3.94966  2.42917  0.09224  0.84774  0.55928
+          0.05523  3.36752  3.94966  2.24890  0.11151  1.02145  0.44640
      55   2.11356  0.46400  2.46442  1.79955    960 c x - -
           1.23932  1.35913  1.50478  1.46331
-          0.05187  3.47055  3.94022  2.35854  0.09933  1.12102  0.39445
+          0.05187  3.47055  3.94022  2.17140  0.12106  1.10399  0.40279
      56   1.85868  0.79440  2.22069  1.25971    983 c x - -
           1.21951  1.50212  1.51138  1.34185
-          0.06404  3.29054  3.69705  1.75742  0.18933  1.18410  0.36532
+          0.06404  3.29054  3.69705  1.69351  0.20318  1.11833  0.39575
      57   1.33272  2.32720  0.71452  1.90215    999 g x - -
           1.12229  1.49343  1.56653  1.42255
-          0.04920  3.46654  4.08749  2.17995  0.11996  1.31769  0.31164
+          0.04920  3.46654  4.08749  2.02027  0.14228  1.15003  0.38072
      58   2.48337  0.43652  2.46331  1.68683   1017 c x - -
           1.34704  1.55461  1.38112  1.28222
-          0.04823  3.61532  3.90311  2.20911  0.11631  1.00864  0.45368
+          0.04823  3.61532  3.90311  2.01908  0.14246  1.07530  0.41733
      59   0.41659  2.44509  1.93972  2.20507   1034 a x - -
           1.38198  1.38198  1.39194  1.38932
-          0.03641  3.98130  4.06929  1.35873  0.29704  1.31330  0.31325
+          0.03641  3.98130  4.06929  1.40885  0.28028  1.14581  0.38268
      60   0.41612  2.39160  1.97116  2.21075   1037 a x - -
           1.03649  1.46430  1.57421  1.57557
-          0.04787  3.52599  4.05584  2.32461  0.10294  0.84329  0.56263
+          0.04769  3.52580  4.06641  2.13225  0.12621  1.03124  0.44093
      61   2.66264  2.12302  2.82746  0.28581   1056 t x - -
           1.36925  1.39635  1.38930  1.39048
-          0.04103  3.97406  3.84419  1.39433  0.28502  1.12555  0.39227
+          0.04097  3.97400  3.84718  1.42709  0.27444  1.10349  0.40304
      62   2.26510  2.13196  2.42551  0.37231   1060 t x - -
           1.37965  1.39147  1.39147  1.38264
-          0.04136  3.91664  3.88204  1.24613  0.33914  0.95630  0.48501
+          0.04082  3.91610  3.90805  1.34598  0.30149  1.06394  0.42326
      63   0.41244  2.25761  2.16787  2.12907   1062 a x - -
           1.34515  1.41203  1.41203  1.37753
-          0.04086  3.77867  4.06371  1.30483  0.31638  1.13245  0.38897
+          0.04054  3.77835  4.08203  1.36896  0.29353  1.10284  0.40336
      64   2.51464  0.37905  2.62296  1.82008   1068 c x - -
           1.39543  1.38753  1.39233  1.37008
-          0.03884  3.90614  4.01884  1.36573  0.29463  1.15716  0.37743
+          0.03854  3.90584  4.03535  1.40940  0.28010  1.10667  0.40146
      65   2.16380  2.11332  2.18714  0.42765   1073 t x - -
           1.38764  1.38471  1.38519  1.38764
-          0.03603  4.05405  4.01529  1.40080  0.28289  1.06383  0.42332
+          0.03575  4.05376  4.03073  1.43270  0.27268  1.08530  0.41219
      66   2.79349  2.39141  2.87271  0.23478   1075 t x - -
           1.37227  1.39101  1.39101  1.39101
-          0.03884  4.01734  3.90722  1.39017  0.28639  1.09574  0.40690
+          0.03597  4.01447  4.05827  1.42619  0.27473  1.09128  0.40915
      67   2.82488  2.47749  2.93179  0.21887   1078 t x - -
           1.38141  1.39112  1.38915  1.38353
-          0.03675  3.99492  4.03549  1.35958  0.29675  1.21867  0.35044
+          0.03661  3.99477  4.04370  1.40962  0.28003  1.10594  0.40182
      68   2.77679  2.30433  2.90694  0.24425   1081 t x - -
           1.37593  1.38989  1.45520  1.32825
-          0.04566  3.68855  3.93098  1.76176  0.18843  1.07133  0.41939
+          0.04447  3.68736  3.99242  1.66809  0.20900  1.07378  0.41811
      69   2.47698  3.17398  0.19595  2.95437   1093 g x - -
           1.38264  1.38264  1.39734  1.38264
-          0.05482  3.96677  3.36946  1.40348  0.28202  1.13963  0.38557
+          0.05358  3.96553  3.40487  1.43194  0.27292  1.08430  0.41270
      70   2.84327  0.27906  2.97336  2.00890   1097 c x - -
           1.38629  1.38629  1.38629  1.38629
-          0.03475  4.08873  4.05197  1.46634  0.26236  0.79234  0.60291
+          0.03412  4.08811  4.08811  1.46634  0.26236  0.97936  0.47089
      71   0.21870  2.83638  2.69251  2.65798   1098 a x - -
           1.37446  1.37942  1.39640  1.39509
-          0.04066  3.94379  3.88865  1.41905  0.27700  1.24551  0.33939
+          0.03670  3.93983  4.09935  1.43996  0.27041  1.09889  0.40532
      72   2.35233  0.46085  2.23804  1.78715   1103 c x - -
           1.38536  1.38781  1.38781  1.38421
-          0.03885  4.04214  3.88532  1.39310  0.28542  1.30851  0.31501
+          0.03493  4.03822  4.09272  1.42863  0.27396  1.09816  0.40569
      73   2.57111  0.32543  2.74124  1.98892   1105 c x - -
           1.38629  1.38629  1.38629  1.38629
-          0.03403  4.09710  4.08422  1.46634  0.26236  1.37004  0.29316
+          0.03381  4.09688  4.09688  1.46634  0.26236  1.09814  0.40570
      74   0.27014  2.61416  2.53262  2.47636   1106 a x - -
           1.38629  1.38629  1.38629  1.38629
-          0.03889  4.09695  3.83874  1.46634  0.26236  1.37489  0.29151
+          0.03461  4.09267  4.05587  1.46634  0.26236  1.09839  0.40558
      75   0.52873  2.16549  1.91736  1.90409   1107 a x - -
           1.38629  1.38629  1.38629  1.38629
-          0.04237  4.09207  3.69758  1.46634  0.26236  1.41112  0.27954
+          0.03426  4.08396  4.08396  1.46634  0.26236  1.09364  0.40796
      76   2.33134  0.38082  2.65861  1.90055   1108 c x - -
           1.38629  1.38629  1.38629  1.38629
-          0.04659  4.08459  3.55121  1.46634  0.26236  1.54765  0.23921
+          0.03466  4.07266  4.07266  1.46634  0.26236  1.09861  0.40547
      77   2.20588  0.45134  2.35553  1.84373   1109 c x - -
           1.38629  1.38629  1.38629  1.38629
-          0.05904  4.07266  3.21140  1.46634  0.26236  1.68734  0.20458
+          0.03550  4.04912  4.04912  1.46634  0.26236  1.09861  0.40547
      78   2.69018  2.22054  2.82311  0.26898   1110 t x - -
           1.38629  1.38629  1.38629  1.38629
-          0.08061  4.04912  2.81320  1.46634  0.26236  1.91269  0.15980
+          0.03711  4.00561  4.00561  1.46634  0.26236  1.09861  0.40547
      79   0.16248  3.15867  2.86159  2.98963   1111 a x - -
           1.38629  1.38629  1.38629  1.38629
-          0.12592  4.00561  2.30158  1.46634  0.26236  2.22059  0.11490
+          0.04048  3.92018  3.92018  1.46634  0.26236  1.09861  0.40547
      80   0.17484  3.04770  2.86638  2.88183   1112 a x - -
           1.38629  1.38629  1.38629  1.38629
           0.02045  3.90014        *  1.46634  0.26236  0.00000        *
--- a/test-data/MADE1.nhmmscan_out	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/MADE1.nhmmscan_out	Mon Jun 11 15:52:05 2018 -0400
@@ -1,12 +1,12 @@
 # nhmmscan :: search DNA sequence(s) against a DNA profile database
-# HMMER 3.1b2 (February 2015); http://hmmer.org/
-# Copyright (C) 2015 Howard Hughes Medical Institute.
-# Freely distributed under the GNU General Public License (GPLv3).
+# HMMER 3.2 (June 2018); http://hmmer.org/
+# Copyright (C) 2018 Howard Hughes Medical Institute.
+# Freely distributed under the BSD open source license.
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-# query sequence file:             /tmp/tmpc_c3amjg/files/000/dataset_2.dat
-# target HMM database:             /tmp/tmpc_c3amjg/files/000/dataset_1.dat
-# per-seq hits tabular output:     /tmp/tmpc_c3amjg/files/000/dataset_4.dat
-# hits output in Dfam format:      /tmp/tmpc_c3amjg/files/000/dataset_5.dat
+# query sequence file:             /tmp/tmpp4O0Ju/files/000/dataset_41.dat
+# target HMM database:             localref.hmm
+# per-seq hits tabular output:     /tmp/tmpp4O0Ju/files/000/dataset_43.dat
+# hits output in Dfam format:      /tmp/tmpp4O0Ju/files/000/dataset_44.dat
 # max ASCII text line length:      unlimited
 # Vit filter P threshold:       <= 0.001
 # Fwd filter P threshold:       <= 1e-05
@@ -18,35 +18,35 @@
 Scores for complete hit:
     E-value  score  bias  Model     start    end  Description
     ------- ------ -----  --------  -----  -----  -----------
-    1.2e-10   38.6   7.4  MADE1    302390 302466  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-    7.8e-08   29.6   8.3  MADE1    174456 174498  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-    1.2e-07   28.9   6.0  MADE1    302466 302390  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-    7.2e-06   23.3   7.0  MADE1    174493 174456  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+    8.7e-11   39.2   7.4  MADE1    302390 302466 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+    6.4e-08   30.0   8.3  MADE1    174456 174498 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+    9.3e-08   29.5   6.1  MADE1    302466 302390 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+    6.3e-06   23.7   7.0  MADE1    174493 174456 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
   ------ inclusion threshold ------
-        1.4    6.3   7.0  MADE1    304073 304104  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+        1.4    6.5   7.0  MADE1    304073 304104 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
 
 
 Annotation for each hit  (and alignments):
 >> MADE1  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
     score  bias    Evalue   hmmfrom    hmm to     alifrom    ali to      envfrom    env to      mod len      acc
    ------ ----- ---------   -------   -------    --------- ---------    --------- ---------    ---------    ----
- !   38.6   7.4   1.2e-10         4        80 .]    302390    302466 ..    302387    302466 ..        80    0.87
+ !   39.2   7.4   8.7e-11         4        80 .]    302390    302466 ..    302387    302466 ..        80    0.87
 
   Alignment:
-  score: 38.6 bits
+  score: 39.2 bits
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
                           MADE1      4 ggttggtgcaaaagtaattgcggtttttgccattacttttaatggc....aaaaaccgcaattacttttgcaccaacctaa 80    
-                                       ggt ggtgcaaaa  aattg ggtttttgccatt cttttaat gc    a aaa  g a  t ctttt caccaa ctaa
-  humanchr1/239220001-239550000 302390 GGTCGGTGCAAAATCAATTGTGGTTTTTGCCATTGCTTTTAATTGCttttA-AAA--GTA-ATGCTTTTACACCAATCTAA 302466
-                                       899******************************************955533.443..334.4689***********99986 PP
+                                       ggt ggtgcaaaa  aattg ggtttttgccatt cttttaat gc    a aaa  g  a t ctttt caccaa ctaa
+  humanchr1/239220001-239550000 302390 GGTCGGTGCAAAATCAATTGTGGTTTTTGCCATTGCTTTTAATTGCttttA-AAA--GT-AATGCTTTTACACCAATCTAA 302466
+                                       899******************************************955533.443..33.44689************9986 PP
 
 >> MADE1  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
     score  bias    Evalue   hmmfrom    hmm to     alifrom    ali to      envfrom    env to      mod len      acc
    ------ ----- ---------   -------   -------    --------- ---------    --------- ---------    ---------    ----
- !   29.6   8.3   7.8e-08         1        43 [.    174456    174498 ..    174456    174518 ..        80    0.92
+ !   30.0   8.3   6.4e-08         1        43 [.    174456    174498 ..    174456    174518 ..        80    0.92
 
   Alignment:
-  score: 29.6 bits
+  score: 30.0 bits
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
                           MADE1      1 ttaggttggtgcaaaagtaattgcggtttttgccattactttt 43    
                                        ttaggtt gtgcaaaagtaattg ggtttttg cattactttt
@@ -56,36 +56,36 @@
 >> MADE1  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
     score  bias    Evalue   hmmfrom    hmm to     alifrom    ali to      envfrom    env to      mod len      acc
    ------ ----- ---------   -------   -------    --------- ---------    --------- ---------    ---------    ----
- !   28.9   6.0   1.2e-07         1        77 [.    302466    302390 ..    302466    302387 ..        80    0.74
+ !   29.5   6.1   9.3e-08         1        77 [.    302466    302390 ..    302466    302387 ..        80    0.74
 
   Alignment:
-  score: 28.9 bits
+  score: 29.5 bits
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
                           MADE1      1 ttaggttggtgcaaaagtaattgcggtttttgccattactttt................aatggcaaaaaccgcaattacttttgcaccaacc 77    
                                        ttag ttggtg aaaag                cattactttt                aatggcaaaaacc caatt  ttttgcacc acc
   humanchr1/239220001-239550000 302466 TTAGATTGGTGTAAAAG----------------CATTACTTTTaaaagcaattaaaagcAATGGCAAAAACCACAATTGATTTTGCACCGACC 302390
-                                       68999999999999998................5666777776222222222222222268****************************9998 PP
+                                       68999999999999998................4666777765222222222222222268****************************9998 PP
 
 >> MADE1  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
     score  bias    Evalue   hmmfrom    hmm to     alifrom    ali to      envfrom    env to      mod len      acc
    ------ ----- ---------   -------   -------    --------- ---------    --------- ---------    ---------    ----
- !   23.3   7.0   7.2e-06        43        80 .]    174493    174456 ..    174513    174456 ..        80    0.91
+ !   23.7   7.0   6.3e-06        43        80 .]    174493    174456 ..    174513    174456 ..        80    0.91
 
   Alignment:
-  score: 23.3 bits
+  score: 23.7 bits
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
                           MADE1     43 taatggcaaaaaccgcaattacttttgcaccaacctaa 80    
                                        taatg caaaaacc caattacttttgcac aacctaa
   humanchr1/239220001-239550000 174493 TAATGACAAAAACCACAATTACTTTTGCACTAACCTAA 174456
-                                       689********************************985 PP
+                                       689********************************986 PP
 
 >> MADE1  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
     score  bias    Evalue   hmmfrom    hmm to     alifrom    ali to      envfrom    env to      mod len      acc
    ------ ----- ---------   -------   -------    --------- ---------    --------- ---------    ---------    ----
- ?    6.3   7.0       1.4        41        72 ..    304073    304104 ..    304053    304109 ..        80    0.85
+ ?    6.5   7.0       1.4        41        72 ..    304073    304104 ..    304053    304109 ..        80    0.85
 
   Alignment:
-  score: 6.3 bits
+  score: 6.5 bits
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
                           MADE1     41 tttaatggcaaaaaccgcaattacttttgcac 72    
                                        tt a tgg aaaaa   ca tta ttttgca 
@@ -98,12 +98,12 @@
 -------------------------------------
 Query sequence(s):                         1  (660000 residues searched)
 Target model(s):                           1  (80 nodes)
-Residues passing SSV filter:             61794  (0.0936); expected (0.02)
-Residues passing bias filter:            46199  (0.07); expected (0.02)
-Residues passing Vit filter:              2752  (0.00417); expected (0.001)
-Residues passing Fwd filter:              2526  (0.00383); expected (1e-05)
-Total number of hits:                        5  (0.000405)
+Residues passing SSV filter:           63737  (0.0966); expected (0.02)
+Residues passing bias filter:          44695  (0.0677); expected (0.02)
+Residues passing Vit filter:            2309  (0.0035); expected (0.001)
+Residues passing Fwd filter:            2041  (0.00309); expected (1e-05)
+Total number of hits:                      5  (0.000405)
 # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
-# Mc/sec: 2640.00
+# Mc/sec: 2407.09
 //
 [ok]
--- a/test-data/MADE1.nhmmscan_out.aliscoresout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/MADE1.nhmmscan_out.aliscoresout	Mon Jun 11 15:52:05 2018 -0400
@@ -1,17 +1,17 @@
 # target name        accession   query name                    accession  hmmfrom hmm to alifrom  ali to envfrom  env to  modlen strand   E-value  score  bias  description of target
 #-------------------  ----------          -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- ---------------------
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -                4      80  302390  302466  302387  302466      80    +     1.2e-10   38.6   7.4  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -                1      43  174456  174498  174456  174518      80    +     7.8e-08   29.6   8.3  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -                1      77  302466  302390  302466  302387      80    -     1.2e-07   28.9   6.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -               43      80  174493  174456  174513  174456      80    -     7.2e-06   23.3   7.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -               41      72  304073  304104  304053  304109      80    +         1.4    6.3   7.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -                4      80  302390  302466  302387  302466      80    +     8.7e-11   39.2   7.4  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -                1      43  174456  174498  174456  174518      80    +     6.4e-08   30.0   8.3  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -                1      77  302466  302390  302466  302387      80    -     9.3e-08   29.5   6.1  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -               43      80  174493  174456  174513  174456      80    -     6.3e-06   23.7   7.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -               41      72  304073  304104  304053  304109      80    +         1.4    6.5   7.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
 #
 # Program:         hmmscan
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SCAN
-# Query file:      /tmp/tmpc_c3amjg/files/000/dataset_2.dat
-# Target file:     /tmp/tmpc_c3amjg/files/000/dataset_1.dat
-# Option settings: nhmmscan --tblout /tmp/tmpc_c3amjg/files/000/dataset_4.dat --dfamtblout /tmp/tmpc_c3amjg/files/000/dataset_5.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --B1 110 --B2 240 --B3 1000 --cpu 1 /tmp/tmpc_c3amjg/files/000/dataset_1.dat /tmp/tmpc_c3amjg/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmpc_c3amjg/job_working_directory/000/3/working
-# Date:            Wed Apr  4 16:58:45 2018
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_41.dat
+# Target file:     localref.hmm
+# Option settings: nhmmscan --tblout /tmp/tmpp4O0Ju/files/000/dataset_43.dat --dfamtblout /tmp/tmpp4O0Ju/files/000/dataset_44.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --B1 110 --B2 240 --B3 1000 --cpu 1 localref.hmm /tmp/tmpp4O0Ju/files/000/dataset_41.dat 
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/33/working
+# Date:            Fri Jun  8 12:19:16 2018
 # [ok]
--- a/test-data/MADE1.nhmmscan_out.dfamtblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/MADE1.nhmmscan_out.dfamtblout	Mon Jun 11 15:52:05 2018 -0400
@@ -3,8 +3,8 @@
 #
 # target name         acc                  query name                      bits   e-value  bias  hmm-st  hmm-en strand  ali-st  ali-en  env-st  env-en  modlen   description of target
 # ------------------- -------------------  -------------------           ------ --------- ----- ------- ------- ------ ------- ------- ------- ------- -------   ---------------------
-MADE1                 DF0000629.2          humanchr1/239220001-239550000   38.6   1.2e-10   7.4       4      80    +    302390  302466  302387  302466      80   MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                 DF0000629.2          humanchr1/239220001-239550000   29.6   7.8e-08   8.3       1      43    +    174456  174498  174456  174518      80   MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                 DF0000629.2          humanchr1/239220001-239550000   28.9   1.2e-07   6.0       1      77    -    302466  302390  302466  302387      80   MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                 DF0000629.2          humanchr1/239220001-239550000   23.3   7.2e-06   7.0      43      80    -    174493  174456  174513  174456      80   MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                 DF0000629.2          humanchr1/239220001-239550000    6.3       1.4   7.0      41      72    +    304073  304104  304053  304109      80   MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                 DF0000629.2          humanchr1/239220001-239550000   39.2   8.7e-11   7.4       4      80    +    302390  302466  302387  302466      80   MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                 DF0000629.2          humanchr1/239220001-239550000   30.0   6.4e-08   8.3       1      43    +    174456  174498  174456  174518      80   MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                 DF0000629.2          humanchr1/239220001-239550000   29.5   9.3e-08   6.1       1      77    -    302466  302390  302466  302387      80   MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                 DF0000629.2          humanchr1/239220001-239550000   23.7   6.3e-06   7.0      43      80    -    174493  174456  174513  174456      80   MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                 DF0000629.2          humanchr1/239220001-239550000    6.5       1.4   7.0      41      72    +    304073  304104  304053  304109      80   MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
--- a/test-data/MADE1.nhmmscan_out.tblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/MADE1.nhmmscan_out.tblout	Mon Jun 11 15:52:05 2018 -0400
@@ -1,17 +1,17 @@
 # target name        accession   query name                    accession  hmmfrom hmm to alifrom  ali to envfrom  env to  modlen strand   E-value  score  bias  description of target
 #-------------------  ----------          -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- ---------------------
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -                4      80  302390  302466  302387  302466      80    +     1.2e-10   38.6   7.4  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -                1      43  174456  174498  174456  174518      80    +     7.8e-08   29.6   8.3  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -                1      77  302466  302390  302466  302387      80    -     1.2e-07   28.9   6.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -               43      80  174493  174456  174513  174456      80    -     7.2e-06   23.3   7.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -               41      72  304073  304104  304053  304109      80    +         1.4    6.3   7.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -                4      80  302390  302466  302387  302466      80    +     8.7e-11   39.2   7.4  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -                1      43  174456  174498  174456  174518      80    +     6.4e-08   30.0   8.3  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -                1      77  302466  302390  302466  302387      80    -     9.3e-08   29.5   6.1  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -               43      80  174493  174456  174513  174456      80    -     6.3e-06   23.7   7.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -               41      72  304073  304104  304053  304109      80    +         1.4    6.5   7.0  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
 #
 # Program:         hmmscan
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SCAN
-# Query file:      /tmp/tmpc_c3amjg/files/000/dataset_2.dat
-# Target file:     /tmp/tmpc_c3amjg/files/000/dataset_1.dat
-# Option settings: nhmmscan --tblout /tmp/tmpc_c3amjg/files/000/dataset_4.dat --dfamtblout /tmp/tmpc_c3amjg/files/000/dataset_5.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --B1 110 --B2 240 --B3 1000 --cpu 1 /tmp/tmpc_c3amjg/files/000/dataset_1.dat /tmp/tmpc_c3amjg/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmpc_c3amjg/job_working_directory/000/3/working
-# Date:            Wed Apr  4 16:58:45 2018
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_41.dat
+# Target file:     localref.hmm
+# Option settings: nhmmscan --tblout /tmp/tmpp4O0Ju/files/000/dataset_43.dat --dfamtblout /tmp/tmpp4O0Ju/files/000/dataset_44.dat --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --B1 110 --B2 240 --B3 1000 --cpu 1 localref.hmm /tmp/tmpp4O0Ju/files/000/dataset_41.dat 
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/33/working
+# Date:            Fri Jun  8 12:19:16 2018
 # [ok]
--- a/test-data/MADE1.out	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/MADE1.out	Mon Jun 11 15:52:05 2018 -0400
@@ -1,13 +1,13 @@
 # hmmscan :: search sequence(s) against a profile database
-# HMMER 3.1b2 (February 2015); http://hmmer.org/
-# Copyright (C) 2015 Howard Hughes Medical Institute.
-# Freely distributed under the GNU General Public License (GPLv3).
+# HMMER 3.2 (June 2018); http://hmmer.org/
+# Copyright (C) 2018 Howard Hughes Medical Institute.
+# Freely distributed under the BSD open source license.
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-# query sequence file:             /tmp/tmpYWzicI/files/000/dataset_20.dat
-# target HMM database:             /tmp/tmpYWzicI/files/000/dataset_19.dat
-# per-seq hits tabular output:     /tmp/tmpYWzicI/files/000/dataset_22.dat
-# per-dom hits tabular output:     /tmp/tmpYWzicI/files/000/dataset_23.dat
-# pfam-style tabular hit output:   /tmp/tmpYWzicI/files/000/dataset_24.dat
+# query sequence file:             /tmp/tmpp4O0Ju/files/000/dataset_20.dat
+# target HMM database:             localref.hmm
+# per-seq hits tabular output:     /tmp/tmpp4O0Ju/files/000/dataset_22.dat
+# per-dom hits tabular output:     /tmp/tmpp4O0Ju/files/000/dataset_23.dat
+# pfam-style tabular hit output:   /tmp/tmpp4O0Ju/files/000/dataset_24.dat
 # max ASCII text line length:      unlimited
 # Vit filter P threshold:       <= 0.001
 # Fwd filter P threshold:       <= 1e-05
@@ -20,54 +20,54 @@
    --- full sequence ---   --- best 1 domain ---    -#dom-
     E-value  score  bias    E-value  score  bias    exp  N  Model    Description
     ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
-      1e-17   51.0  28.5    2.7e-12   33.7   0.7    9.6  5  MADE1     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+    5.7e-18   51.8  27.9      2e-12   34.1   0.7    9.6  5  MADE1     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
 
 
 Domain annotation for each model (and alignments):
 >> MADE1  MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 ?   -4.2   0.1         1         1      30      54 ..   80044   80068 ..   80030   80073 .. 0.80
+   1 ?   -4.5   0.0         1         1      30      54 ..   80044   80068 ..   80033   80072 .. 0.81
    2 ?   -6.6   3.3         1         1      13      71 ..  154012  154072 ..  154011  154076 .. 0.75
-   3 !   27.4   0.7   2.4e-10   2.4e-10       1      44 [.  174456  174514 ..  174456  174577 .. 0.62
-   4 !   33.7   0.7   2.7e-12   2.7e-12       2      80 .]  302388  302466 ..  302387  302466 .. 0.86
-   5 ?    2.9   0.7     0.011     0.011      27      75 ..  304060  304107 ..  304021  304109 .. 0.61
+   3 !   27.4   0.7   2.4e-10   2.4e-10       1      43 [.  174456  174498 ..  174456  174577 .. 0.66
+   4 !   34.1   0.7     2e-12     2e-12       2      80 .]  302388  302466 ..  302387  302466 .. 0.86
+   5 ?    2.8   0.7     0.011     0.011      27      75 ..  304060  304107 ..  304022  304109 .. 0.62
 
   Alignments for each domain:
-  == domain 1  score: -4.2 bits;  conditional E-value: 1
+  == domain 1  score: -4.5 bits;  conditional E-value: 1
                                       xxxxxxxxxxxxxxxxxxxxxxxxx RF
-                          MADE1    30 ttgccattacttttaatggcaaaaa 54
+                          MADE1    30 ttgccattacttttaatggcaaaaa 54   
                                       t g catt  ttt aatggcaaa a
   humanchr1/239220001-239550000 80044 TAGTCATTCATTTCAATGGCAAATA 80068
-                                      45789****************9966 PP
+                                      457899***************9865 PP
 
   == domain 2  score: -6.6 bits;  conditional E-value: 1
                                        xxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-                          MADE1     13 aaaagtaattgcggtttttgccatt......acttttaatggcaaaaaccgcaattacttttgca 71
+                          MADE1     13 aaaagtaattgcggtttttgccatt......acttttaatggcaaaaaccgcaattacttttgca 71    
                                        aaaagta tt +   ttttgc att      a  tttaa  gcaaa a +    tta  tttgca
   humanchr1/239220001-239550000 154012 AAAAGTAGTTTTCAATTTTGCAATTtgaccaATATTTAAATGCAAATATT----TTATATTTGCA 154072
-                                       78999999999999999999999984444444457777777899998876....77777888876 PP
+                                       78999999999999999999999984444444457777777899988765....67777778776 PP
 
   == domain 3  score: 27.4 bits;  conditional E-value: 2.4e-10
-                                       xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............x RF
-                          MADE1      1 ttaggttggtgcaaaagtaattgcggtttttgccattactttt...............a 44
-                                       ttaggtt gtgcaaaagtaattg+ggtttttg cattactttt               a
-  humanchr1/239220001-239550000 174456 TTAGGTTAGTGCAAAAGTAATTGTGGTTTTTGTCATTACTTTTctgcatgctagaagtA 174514
-                                       79***************************************964443333333333330 PP
+                                       xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+                          MADE1      1 ttaggttggtgcaaaagtaattgcggtttttgccattactttt 43    
+                                       ttaggtt gtgcaaaagtaattg+ggtttttg cattactttt
+  humanchr1/239220001-239550000 174456 TTAGGTTAGTGCAAAAGTAATTGTGGTTTTTGTCATTACTTTT 174498
+                                       79**************************************996 PP
 
-  == domain 4  score: 33.7 bits;  conditional E-value: 2.7e-12
-                                       xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-                          MADE1      2 taggttggtgcaaaagtaattgcggtttttgccattacttttaatggcaaaaaccgcaattacttttgcaccaacctaa 80
-                                       t ggt ggtgcaaaa  aattg+ggtttttgccatt cttttaat gc    a  +  a t ctttt caccaa ctaa
-  humanchr1/239220001-239550000 302388 TTGGTCGGTGCAAAATCAATTGTGGTTTTTGCCATTGCTTTTAATTGCTTTTAAAAGTAATGCTTTTACACCAATCTAA 302466
-                                       56899******************************************963333233345578**************996 PP
+  == domain 4  score: 34.1 bits;  conditional E-value: 2e-12
+                                       xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+                          MADE1      2 taggttggtgcaaaagtaattgcggtttttgccattacttttaatggca...aaaaccgcaattacttttgcaccaacctaa 80    
+                                       t ggt ggtgcaaaa  aattg+ggtttttgccatt cttttaat gc    aaaa  g  a t ctttt caccaa ctaa
+  humanchr1/239220001-239550000 302388 TTGGTCGGTGCAAAATCAATTGTGGTTTTTGCCATTGCTTTTAATTGCTtttAAAA--G-TAATGCTTTTACACCAATCTAA 302466
+                                       56899******************************************962223333..3.45578**************997 PP
 
-  == domain 5  score: 2.9 bits;  conditional E-value: 0.011
+  == domain 5  score: 2.8 bits;  conditional E-value: 0.011
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-                          MADE1     27 tttttgccattacttttaatggcaaaaaccgcaattacttttgcaccaa 75
+                          MADE1     27 tttttgccattacttttaatggcaaaaaccgcaattacttttgcaccaa 75    
                                        tttt g c  ta  tt a tgg aaaaa ++ca tta ttttgca  aa
   humanchr1/239220001-239550000 304060 TTTTAGACTATA-GTTAAGTGGGAAAAAATACACTTATTTTTGCATTAA 304107
-                                       222222222222.3455779************************98765 PP
+                                       222223222222.3556779************************98765 PP
 
 
 
@@ -81,7 +81,7 @@
 Passed Fwd filter:                         1  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  1  [actual number of targets]
 Domain search space  (domZ):               1  [number of targets reported over threshold]
-# CPU time: 0.15u 0.00s 00:00:00.15 Elapsed: 00:00:00.16
-# Mc/sec: 165.00
+# CPU time: 0.14u 0.01s 00:00:00.15 Elapsed: 00:00:00.14
+# Mc/sec: 177.58
 //
 [ok]
--- a/test-data/MADE1.out.domtblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/MADE1.out.domtblout	Mon Jun 11 15:52:05 2018 -0400
@@ -1,18 +1,18 @@
 #                                                                                      --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
 # target name        accession    tlen query name                    accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
 #-------------------  ---------- -----          -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
-MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000     1e-17   51.0  28.5   1   5         1         1   -4.2   0.1    30    54 80044 80068 80030 80073 0.80 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000     1e-17   51.0  28.5   2   5         1         1   -6.6   3.3    13    71 154012 154072 154011 154076 0.75 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000     1e-17   51.0  28.5   3   5   2.4e-10   2.4e-10   27.4   0.7     1    44 174456 174514 174456 174577 0.62 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000     1e-17   51.0  28.5   4   5   2.7e-12   2.7e-12   33.7   0.7     2    80 302388 302466 302387 302466 0.86 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000     1e-17   51.0  28.5   5   5     0.011     0.011    2.9   0.7    27    75 304060 304107 304021 304109 0.61 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   5.7e-18   51.8  27.9   1   5         1         1   -4.5   0.0    30    54 80044 80068 80033 80072 0.81 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   5.7e-18   51.8  27.9   2   5         1         1   -6.6   3.3    13    71 154012 154072 154011 154076 0.75 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   5.7e-18   51.8  27.9   3   5   2.4e-10   2.4e-10   27.4   0.7     1    43 174456 174498 174456 174577 0.66 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   5.7e-18   51.8  27.9   4   5     2e-12     2e-12   34.1   0.7     2    80 302388 302466 302387 302466 0.86 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   5.7e-18   51.8  27.9   5   5     0.011     0.011    2.8   0.7    27    75 304060 304107 304022 304109 0.62 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
 #
 # Program:         hmmscan
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SCAN
-# Query file:      /tmp/tmpYWzicI/files/000/dataset_2.dat
-# Target file:     /tmp/tmpYWzicI/files/000/dataset_1.dat
-# Option settings: hmmscan --tblout /tmp/tmpYWzicI/files/000/dataset_4.dat --domtblout /tmp/tmpYWzicI/files/000/dataset_5.dat --pfamtblout /tmp/tmpYWzicI/files/000/dataset_6.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpYWzicI/files/000/dataset_1.dat /tmp/tmpYWzicI/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmpYWzicI/job_working_directory/000/3
-# Date:            Sat Jun 25 19:05:15 2016
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_20.dat
+# Target file:     localref.hmm
+# Option settings: hmmscan --tblout /tmp/tmpp4O0Ju/files/000/dataset_22.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_23.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_24.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 localref.hmm /tmp/tmpp4O0Ju/files/000/dataset_20.dat 
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/21/working
+# Date:            Fri Jun  8 12:17:53 2018
 # [ok]
--- a/test-data/MADE1.out.pfamtblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/MADE1.out.pfamtblout	Mon Jun 11 15:52:05 2018 -0400
@@ -3,25 +3,25 @@
 #
 # name                  bits   E-value   n   exp  bias    description
 # ------------------- ------ --------- --- ----- -----    ---------------------
-MADE1                   51.0     1e-17   5   9.6  28.5    MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                   51.8   5.7e-18   5   9.6  27.9    MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
 
 # Domain scores
 # -------------
 #
 #  name                 bits   E-value   hit  bias env-st env-en ali-st ali-en hmm-st hmm-en     description
 # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------      ---------------------
-MADE1                   33.7   2.7e-12     4   0.7 302387 302466 302388 302466      2     80     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                   27.4   2.4e-10     3   0.7 174456 174577 174456 174514      1     44     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                    2.9     0.011     5   0.7 304021 304109 304060 304107     27     75     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
-MADE1                   -4.2         1     1   0.1  80030  80073  80044  80068     30     54     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                   34.1     2e-12     4   0.7 302387 302466 302388 302466      2     80     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                   27.4   2.4e-10     3   0.7 174456 174577 174456 174498      1     43     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                    2.8     0.011     5   0.7 304022 304109 304060 304107     27     75     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                   -4.5         1     1   0.0  80033  80072  80044  80068     30     54     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
 MADE1                   -6.6         1     2   3.3 154011 154076 154012 154072     13     71     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
 #
 # Program:         hmmscan
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SEARCH
-# Query file:      /tmp/tmpYWzicI/files/000/dataset_2.dat
-# Target file:     /tmp/tmpYWzicI/files/000/dataset_1.dat
-# Option settings: hmmscan --tblout /tmp/tmpYWzicI/files/000/dataset_4.dat --domtblout /tmp/tmpYWzicI/files/000/dataset_5.dat --pfamtblout /tmp/tmpYWzicI/files/000/dataset_6.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpYWzicI/files/000/dataset_1.dat /tmp/tmpYWzicI/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmpYWzicI/job_working_directory/000/3
-# Date:            Sat Jun 25 19:05:15 2016
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_20.dat
+# Target file:     localref.hmm
+# Option settings: hmmscan --tblout /tmp/tmpp4O0Ju/files/000/dataset_22.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_23.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_24.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 localref.hmm /tmp/tmpp4O0Ju/files/000/dataset_20.dat 
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/21/working
+# Date:            Fri Jun  8 12:17:53 2018
 # [ok]
--- a/test-data/MADE1.out.tblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/MADE1.out.tblout	Mon Jun 11 15:52:05 2018 -0400
@@ -1,14 +1,14 @@
 #                                                                         --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
 # target name        accession   query name                    accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
 #-------------------  ----------          -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
-MADE1                DF0000629.2 humanchr1/239220001-239550000 -            7.1e-18   51.5  28.5     2e-12   34.0   0.7   9.6   5   0   0   5   5   5   2 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
+MADE1                DF0000629.2 humanchr1/239220001-239550000 -            5.7e-18   51.8  27.9     2e-12   34.1   0.7   9.6   5   0   0   5   5   5   2 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
 #
 # Program:         hmmscan
-# Version:         3.1b1 (May 2013)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SCAN
-# Query file:      test-data/dna_target.fa
-# Target file:     test-data/MADE1.hmm
-# Option settings: hmmscan --tblout tblout --domtblout domtblout --pfamtblout pfamtblout test-data/MADE1.hmm test-data/dna_target.fa 
-# Current dir:     /home/users/cpt/cpt/esr/Projects/galaxy/tools-iuc/tools/hmmer
-# Date:            Tue Feb 10 14:40:35 2015
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_20.dat
+# Target file:     localref.hmm
+# Option settings: hmmscan --tblout /tmp/tmpp4O0Ju/files/000/dataset_22.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_23.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_24.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 localref.hmm /tmp/tmpp4O0Ju/files/000/dataset_20.dat 
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/21/working
+# Date:            Fri Jun  8 12:17:53 2018
 # [ok]
--- a/test-data/fn3.hmm	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/fn3.hmm	Mon Jun 11 15:52:05 2018 -0400
@@ -1,4 +1,4 @@
-HMMER3/f [3.1 | February 2013]
+HMMER3/f [3.2 | June 2018]
 NAME  fn3
 ACC   PF00041.13
 DESC  Fibronectin type III domain
--- a/test-data/globins-masked.sto	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/globins-masked.sto	Mon Jun 11 15:52:05 2018 -0400
@@ -9,5 +9,5 @@
 HBA_HUMAN  ---------VLSPADKTNVKAAWGKVGA--HAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTNAVAHV---D--DMPNALSALSDLHAHKL--RVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR------
 MYG_PHYCA  ---------VLSEGEWQLVLHVWAKVEA--DVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTALGAILKK----K-GHHEAELKPLAQSHATKH--KIPIKYLEFISEAIIHVLHSRHPGDFGADAQGAMNKALELFRKDIAAKYKELGYQG
 GLB5_PETMA PIVDTGSVAPLSAAEKTKIRSAWAPVYS--TYETSGVDILVKFFTSTPAAQEFFPKFKGLTTADQLKKSADVRWHAERIINAVNDAVASM--DDTEKMSMKLRDLSGKHAKSF--QVDPQYFKVLAAVIADTVAAG---------DAGFEKLMSMICILLRSAY-------
-#=GC MM    .................mmmmmmmmmmm...........mmmmmmmmmmm.........................................................................................................................
+#=GC MM    .................mmmmmmmmmmm...............................................................................................................................................
 //
--- a/test-data/globins.domtblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/globins.domtblout	Mon Jun 11 15:52:05 2018 -0400
@@ -1,15 +1,15 @@
 #                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
 # target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
 #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
-sp|P02185|MYG_PHYCD  -            154 globins4             -            149   1.8e-70  222.7   3.2   1   1     2e-70     2e-70  222.6   3.2     2   149     2   148     1   148 0.99 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2
-sp|P02024|HBB_GORGO  -            147 globins4             -            149   9.2e-69  217.2   0.1   1   1     1e-68     1e-68  217.0   0.1     1   149     2   147     2   147 0.99 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
+sp|P02185|MYG_PHYCD  -            154 dataset_x            -            149   1.8e-70  222.7   3.2   1   1     2e-70     2e-70  222.6   3.2     2   149     2   148     1   148 0.99 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2
+sp|P02024|HBB_GORGO  -            147 dataset_x            -            149   9.2e-69  217.2   0.1   1   1     1e-68     1e-68  217.0   0.1     1   149     2   147     2   147 0.99 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
 #
 # Program:         hmmsearch
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SEARCH
-# Query file:      /tmp/tmpJW6ntL/files/000/dataset_1.dat
-# Target file:     /tmp/tmpJW6ntL/files/000/dataset_2.dat
-# Option settings: hmmsearch --tblout /tmp/tmpJW6ntL/files/000/dataset_4.dat --domtblout /tmp/tmpJW6ntL/files/000/dataset_5.dat --pfamtblout /tmp/tmpJW6ntL/files/000/dataset_6.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpJW6ntL/files/000/dataset_1.dat /tmp/tmpJW6ntL/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmpJW6ntL/job_working_directory/000/3
-# Date:            Sat Jun 25 19:27:08 2016
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_25.dat
+# Target file:     /tmp/tmpp4O0Ju/files/000/dataset_26.dat
+# Option settings: hmmsearch --tblout /tmp/tmpp4O0Ju/files/000/dataset_28.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_29.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_30.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_25.dat /tmp/tmpp4O0Ju/files/000/dataset_26.dat
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/24/working
+# Date:            Fri Jun  8 12:18:13 2018
 # [ok]
--- a/test-data/globins.pfamtblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/globins.pfamtblout	Mon Jun 11 15:52:05 2018 -0400
@@ -15,11 +15,11 @@
 sp|P02024|HBB_GORGO    217.0     1e-68     1   0.1      2    147      2    147      1    149     Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
 #
 # Program:         hmmsearch
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SEARCH
-# Query file:      /tmp/tmpJW6ntL/files/000/dataset_1.dat
-# Target file:     /tmp/tmpJW6ntL/files/000/dataset_2.dat
-# Option settings: hmmsearch --tblout /tmp/tmpJW6ntL/files/000/dataset_4.dat --domtblout /tmp/tmpJW6ntL/files/000/dataset_5.dat --pfamtblout /tmp/tmpJW6ntL/files/000/dataset_6.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpJW6ntL/files/000/dataset_1.dat /tmp/tmpJW6ntL/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmpJW6ntL/job_working_directory/000/3
-# Date:            Sat Jun 25 19:27:08 2016
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_25.dat
+# Target file:     /tmp/tmpp4O0Ju/files/000/dataset_26.dat
+# Option settings: hmmsearch --tblout /tmp/tmpp4O0Ju/files/000/dataset_28.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_29.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_30.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_25.dat /tmp/tmpp4O0Ju/files/000/dataset_26.dat 
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/24/working
+# Date:            Fri Jun  8 12:18:13 2018
 # [ok]
--- a/test-data/globins.tblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/globins.tblout	Mon Jun 11 15:52:05 2018 -0400
@@ -1,15 +1,15 @@
 #                                                               --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
 # target name        accession  query name           accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
 #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
-sp|P02185|MYG_PHYCD  -          globins4             -            1.8e-70  222.7   3.2     2e-70  222.6   3.2   1.0   1   0   0   1   1   1   1 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2
-sp|P02024|HBB_GORGO  -          globins4             -            9.2e-69  217.2   0.1     1e-68  217.0   0.1   1.0   1   0   0   1   1   1   1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
+sp|P02185|MYG_PHYCD  -          dataset_x            -            1.8e-70  222.7   3.2     2e-70  222.6   3.2   1.0   1   0   0   1   1   1   1 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2
+sp|P02024|HBB_GORGO  -          dataset_x            -            9.2e-69  217.2   0.1     1e-68  217.0   0.1   1.0   1   0   0   1   1   1   1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
 #
 # Program:         hmmsearch
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SEARCH
-# Query file:      /tmp/tmpJW6ntL/files/000/dataset_1.dat
-# Target file:     /tmp/tmpJW6ntL/files/000/dataset_2.dat
-# Option settings: hmmsearch --tblout /tmp/tmpJW6ntL/files/000/dataset_4.dat --domtblout /tmp/tmpJW6ntL/files/000/dataset_5.dat --pfamtblout /tmp/tmpJW6ntL/files/000/dataset_6.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpJW6ntL/files/000/dataset_1.dat /tmp/tmpJW6ntL/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmpJW6ntL/job_working_directory/000/3
-# Date:            Sat Jun 25 19:27:08 2016
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_25.dat
+# Target file:     /tmp/tmpp4O0Ju/files/000/dataset_26.dat
+# Option settings: hmmsearch --tblout /tmp/tmpp4O0Ju/files/000/dataset_28.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_29.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_30.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_25.dat /tmp/tmpp4O0Ju/files/000/dataset_26.dat
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/24/working
+# Date:            Fri Jun  8 12:18:13 2018
 # [ok]
--- a/test-data/globins4-emit-1.sto	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/globins4-emit-1.sto	Mon Jun 11 15:52:05 2018 -0400
@@ -1,4 +1,4 @@
->globins4-sample1
+>dataset_x-sample1
 CLDDGAENDNVLTGVLDLNPDEPSEAEPLILILVQSAPTTKAHFQKFVLLTTNMQVEFDT
 EIKAHTTMIIGASRAILSSIVQNRMNYYLLLLAKENHSGKERATRKKTDRECLHILGEVI
 TITLKREFPMDSNPAHSSRDGTFDLLVSLYRKALRNLY
--- a/test-data/globins4-emit.sto	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/globins4-emit.sto	Mon Jun 11 15:52:05 2018 -0400
@@ -1,26 +1,26 @@
 # STOCKHOLM 1.0
 
-globins4-sample1  -.CLD.DgAENDNVL..TGV.LDLNPD...EPSEAEPLILILVQ.SAPTTK.AH...........FQKFVLLTTN.MQVEFDTEI..KAHT.T.MIIGASRAILSSI.VqNRMN.Y.YLLLLAkEnhsgkE.R..ATRKKTDRECLHILGEVITITL..KREFPMDSNPAHssrDGTFDLLVSLYRKALRNL.Y-.....
-globins4-sample2  K.PLS.P.AQKKTIR..SAW.LLPGHS...KNDLGQEALVHLDL.AVPAMQ.TMishmlllylhkFPQFEHLSPNvKKLAYAELM..RVGA.I.TTL--LSKQWDTLeA.DATR.R.IPLEEN.D.....V.H..LQKYGLIRKKLQVISALVAKVI..LAGHPENFGPKV...SSAF----IVFYKG--EI.YK.....
-globins4-sample3  S.MIS.K.RFKVLVE..NLW.LKV-AT...AGDIGSDQLVTFKA.VFTKIY.LT...........FDEFKGEKV-.---HREIAI..KLYTlS.AIAAILNPPLLNL.R.RIYN.H.ELSQLS.A.....L.H..CTQMQSNQEYFLV--NLTVDTI..YETKPTQYREKS...EASENKVTNLVSNALTAN.YR.....
-globins4-sample4  IsTEC.L.EENEAAK..DVRqEHIVSEmglVDVYSQLLGVLMTT.SIPPTElNR...........MKEKRKLMTR.AGMTTSYAI..RMRG.NhVIHEALSSSAGR-.N.--NQcD.DVVQLS.Q.....K.Y..VTKIYVHPQKIEHITRVLVII-..PYE---THAAEE...DANMEKAVLSVRSRIVTK.FD.....
-globins4-sample5  -.LIS.E.ASFPLVQnvEIW.VKVFNH...YAEAGNESLIKIVV.TYPDGS.KL...........NHCF-HGK-A.TTCQAANDW..KYDK.E.TFVSTLRKVLASR.K.TRFI.KgKILTVE.N.....E.H..KNSVSVALMRPKLGSNCT--TL..LEVIPSWAGPYE...ESAADKCIPLCASILTSE.YR.....
-globins4-sample6  -.ALPgD.TGKQYSH..VCW.AN-HAR...--ESGLDILVRYYL.SLPQTL.NF...........FPKFVDITPK.PIMTNNARL..KEEG.A.AVLDA-MNSLLKI.V.QTIE.N.QFWALK.K.....S.F..AHALHVD-KIYKMLNELLIVIV..AAMEPEHDRPHA...DTAMYKVLQKLRKQLGEGrSLiygfp
-globins4-sample7  P.KFH.N.STKGEVE..RSY.VKVVSK...VDNEGMEYLKDFLSfSRPHAQ.GK...........FGMLKSLQTL.PGLH-VESC..TTME.I.EVLQNLSTPVTGL.D.SQKG.N.EIKELC.R.....V.HldRRTAHVADETFKTYNNSTILRVaqKVHTMRRFDFAA...ADALESFLSYVPCLIEAQ.YQ.....
-globins4-sample8  V.ALS.K.MEQTRVK..ALY.YQV---...SARSGAQALAEMLVrAHPDSR.ML...........FNQAEVIQTR.LTLAENAQI.qRGWG.K.MVVKADSKNMTRV.EgEKHG.M.EPKASA.R.....N.H..IPRENVINGFFKLSALKVVKTV..DVELARGITFSG...NAPVCPYFKGFAAVLSEP.YE.....
-globins4-sample9  A.PLN.A.PGWQDVE..-IW.EYV---...-FHRTIRILRNLLK.EIPWER.RH...........FIKTSTVCLP.IICMGNAKLpwRDGG.T.QGRRALNPSVKQC.QfAKTS.G.SLRQCY.D.....R.QhvAIKDRVLINYFQIVGDLVVDYV..DVKLPQDFNPNL...EADIDRRLFISQRSLNCK.W-.....
-globins4-sample10 -.TLE.M.QLRTDLS..NVA.VKSLAD...LE-VGLEKLMKLYN.SAKLLH.ALr.........cFEPTTKIVTA.SAPKGLRFV..KHQG.T.KVMTAINQAFADM.E.TNYE.Q.KYQSLR.E.....KyK..IEELSIDPRNFQLLAGRVVVRS..AKPLPILLSRQF...ERVLEEHLHLIGKDLQHK.Y-.....
-#=GC RF           x.xxx.x.xxxxxxx..xxx.xxxxxx...xxxxxxxxxxxxxx.xxxxxx.xx...........xxxxxxxxxx.xxxxxxxxx..xxxx.x.xxxxxxxxxxxxx.x.xxxx.x.xxxxxx.x.....x.x..xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxx...xxxxxxxxxxxxxxxxxx.xx.....
+dataset_x-sample1  -.CLD.DgAENDNVL..TGV.LDLNPD...EPSEAEPLILILVQ.SAPTTK.AH...........FQKFVLLTTN.MQVEFDTEI..KAHT.T.MIIGASRAILSSI.VqNRMN.Y.YLLLLAkEnhsgkE.R..ATRKKTDRECLHILGEVITITL..KREFPMDSNPAHssrDGTFDLLVSLYRKALRNL.Y-.....
+dataset_x-sample2  K.PLS.P.AQKKTIR..SAW.LLPGHS...KNDLGQEALVHLDL.AVPAMQ.TMishmlllylhkFPQFEHLSPNvKKLAYAELM..RVGA.I.TTL--LSKQWDTLeA.DATR.R.IPLEEN.D.....V.H..LQKYGLIRKKLQVISALVAKVI..LAGHPENFGPKV...SSAF----IVFYKG--EI.YK.....
+dataset_x-sample3  S.MIS.K.RFKVLVE..NLW.LKV-AT...AGDIGSDQLVTFKA.VFTKIY.LT...........FDEFKGEKV-.---HREIAI..KLYTlS.AIAAILNPPLLNL.R.RIYN.H.ELSQLS.A.....L.H..CTQMQSNQEYFLV--NLTVDTI..YETKPTQYREKS...EASENKVTNLVSNALTAN.YR.....
+dataset_x-sample4  IsTEC.L.EENEAAK..DVRqEHIVSEmglVDVYSQLLGVLMTT.SIPPTElNR...........MKEKRKLMTR.AGMTTSYAI..RMRG.NhVIHEALSSSAGR-.N.--NQcD.DVVQLS.Q.....K.Y..VTKIYVHPQKIEHITRVLVII-..PYE---THAAEE...DANMEKAVLSVRSRIVTK.FD.....
+dataset_x-sample5  -.LIS.E.ASFPLVQnvEIW.VKVFNH...YAEAGNESLIKIVV.TYPDGS.KL...........NHCF-HGK-A.TTCQAANDW..KYDK.E.TFVSTLRKVLASR.K.TRFI.KgKILTVE.N.....E.H..KNSVSVALMRPKLGSNCT--TL..LEVIPSWAGPYE...ESAADKCIPLCASILTSE.YR.....
+dataset_x-sample6  -.ALPgD.TGKQYSH..VCW.AN-HAR...--ESGLDILVRYYL.SLPQTL.NF...........FPKFVDITPK.PIMTNNARL..KEEG.A.AVLDA-MNSLLKI.V.QTIE.N.QFWALK.K.....S.F..AHALHVD-KIYKMLNELLIVIV..AAMEPEHDRPHA...DTAMYKVLQKLRKQLGEGrSLiygfp
+dataset_x-sample7  P.KFH.N.STKGEVE..RSY.VKVVSK...VDNEGMEYLKDFLSfSRPHAQ.GK...........FGMLKSLQTL.PGLH-VESC..TTME.I.EVLQNLSTPVTGL.D.SQKG.N.EIKELC.R.....V.HldRRTAHVADETFKTYNNSTILRVaqKVHTMRRFDFAA...ADALESFLSYVPCLIEAQ.YQ.....
+dataset_x-sample8  V.ALS.K.MEQTRVK..ALY.YQV---...SARSGAQALAEMLVrAHPDSR.ML...........FNQAEVIQTR.LTLAENAQI.qRGWG.K.MVVKADSKNMTRV.EgEKHG.M.EPKASA.R.....N.H..IPRENVINGFFKLSALKVVKTV..DVELARGITFSG...NAPVCPYFKGFAAVLSEP.YE.....
+dataset_x-sample9  A.PLN.A.PGWQDVE..-IW.EYV---...-FHRTIRILRNLLK.EIPWER.RH...........FIKTSTVCLP.IICMGNAKLpwRDGG.T.QGRRALNPSVKQC.QfAKTS.G.SLRQCY.D.....R.QhvAIKDRVLINYFQIVGDLVVDYV..DVKLPQDFNPNL...EADIDRRLFISQRSLNCK.W-.....
+dataset_x-sample10 -.TLE.M.QLRTDLS..NVA.VKSLAD...LE-VGLEKLMKLYN.SAKLLH.ALr.........cFEPTTKIVTA.SAPKGLRFV..KHQG.T.KVMTAINQAFADM.E.TNYE.Q.KYQSLR.E.....KyK..IEELSIDPRNFQLLAGRVVVRS..AKPLPILLSRQF...ERVLEEHLHLIGKDLQHK.Y-.....
+#=GC RF            x.xxx.x.xxxxxxx..xxx.xxxxxx...xxxxxxxxxxxxxx.xxxxxx.xx...........xxxxxxxxxx.xxxxxxxxx..xxxx.x.xxxxxxxxxxxxx.x.xxxx.x.xxxxxx.x.....x.x..xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxx...xxxxxxxxxxxxxxxxxx.xx.....
 
-globins4-sample1  ...
-globins4-sample2  ...
-globins4-sample3  ...
-globins4-sample4  ...
-globins4-sample5  ...
-globins4-sample6  gmp
-globins4-sample7  ...
-globins4-sample8  ...
-globins4-sample9  ...
-globins4-sample10 ...
-#=GC RF           ...
+dataset_x-sample1  ...
+dataset_x-sample2  ...
+dataset_x-sample3  ...
+dataset_x-sample4  ...
+dataset_x-sample5  ...
+dataset_x-sample6  gmp
+dataset_x-sample7  ...
+dataset_x-sample8  ...
+dataset_x-sample9  ...
+dataset_x-sample10 ...
+#=GC RF            ...
 //
--- a/test-data/globins4.hmm	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/globins4.hmm	Mon Jun 11 15:52:05 2018 -0400
@@ -1,5 +1,5 @@
-HMMER3/f [3.1b1 | May 2013]
-NAME  globins4
+HMMER3/f [3.2 | June 2018]
+NAME  dataset_6
 LENG  149
 ALPH  amino
 RF    no
@@ -7,7 +7,7 @@
 CONS  yes
 CS    no
 MAP   yes
-DATE  Mon Feb  9 11:39:55 2015
+DATE  Fri Jun  8 12:16:18 2018
 NSEQ  4
 EFFN  0.964844
 CKSUM 2027839109
--- a/test-data/globins4.hmm2	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/globins4.hmm2	Mon Jun 11 15:52:05 2018 -0400
@@ -1,12 +1,12 @@
-HMMER2.0  [converted from 3.1b2]
-NAME  globins4
+HMMER2.0  [converted from 3.2]
+NAME  dataset_x
 LENG  149
 ALPH  Amino
 RF    no
 CS    no
 MAP   yes
 NSEQ  4
-DATE  Mon Feb  9 11:39:55 2015
+DATE  Fri Jun  8 12:14:52 2018
 XT       -8455     -4  -1000  -1000  -8455     -4  -8455     -4
 NULT        -4  -8455
 NULE       656  -1722     98    419   -333    475  -1125    239    250    947  -1073   -271    -50   -338    114    451    113    430  -2131   -717
--- a/test-data/jackhmmer.domtblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/jackhmmer.domtblout	Mon Jun 11 15:52:05 2018 -0400
@@ -1,103 +1,103 @@
 #                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
 # target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
 #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
-HBB_MANSP            -            146 sp|P02185|MYG_PHYCD  -            142   7.7e-69  221.6   0.1   1   1   8.6e-69   8.6e-69  221.5   0.1     1   142     6   145     6   145 0.99 -
-HBB_URSMA            -            146 sp|P02185|MYG_PHYCD  -            142   4.1e-68  219.3   0.2   1   1   4.5e-68   4.5e-68  219.1   0.2     1   142     6   145     6   145 0.99 -
-HBB_RABIT            -            146 sp|P02185|MYG_PHYCD  -            142   5.6e-67  215.6   0.5   1   1   6.3e-67   6.3e-67  215.4   0.5     1   142     6   145     6   145 0.99 -
-HBB_CALAR            -            146 sp|P02185|MYG_PHYCD  -            142   1.5e-66  214.2   0.1   1   1   1.7e-66   1.7e-66  214.0   0.1     1   142     6   145     6   145 0.99 -
-HBB_TACAC            -            146 sp|P02185|MYG_PHYCD  -            142     5e-66  212.5   0.3   1   1   5.6e-66   5.6e-66  212.4   0.3     2   142     7   145     6   145 0.99 -
-HBB_COLLI            -            146 sp|P02185|MYG_PHYCD  -            142   5.2e-66  212.5   0.0   1   1   5.7e-66   5.7e-66  212.3   0.0     1   142     6   145     6   145 0.99 -
-HBE_PONPY            -            146 sp|P02185|MYG_PHYCD  -            142   6.6e-66  212.1   0.2   1   1   7.4e-66   7.4e-66  212.0   0.2     1   142     6   145     6   145 0.99 -
-HBB_SUNMU            -            146 sp|P02185|MYG_PHYCD  -            142   7.2e-66  212.0   0.1   1   1     8e-66     8e-66  211.9   0.1     1   142     6   145     6   145 0.99 -
-HBB_ORNAN            -            146 sp|P02185|MYG_PHYCD  -            142     1e-65  211.5   0.0   1   1   1.2e-65   1.2e-65  211.3   0.0     2   142     7   145     6   145 0.99 -
-HBB_SPETO            -            146 sp|P02185|MYG_PHYCD  -            142   1.5e-65  211.0   0.4   1   1   1.7e-65   1.7e-65  210.8   0.4     2   142     7   145     6   145 0.99 -
-HBB_EQUHE            -            146 sp|P02185|MYG_PHYCD  -            142   1.6e-65  210.9   0.2   1   1   1.8e-65   1.8e-65  210.7   0.2     1   142     6   145     6   145 0.99 -
-HBB_SPECI            -            146 sp|P02185|MYG_PHYCD  -            142   2.3e-65  210.4   0.9   1   1   2.5e-65   2.5e-65  210.2   0.9     2   142     7   145     6   145 0.99 -
-HBB_LARRI            -            146 sp|P02185|MYG_PHYCD  -            142     3e-65  210.0   0.0   1   1   3.4e-65   3.4e-65  209.8   0.0     1   142     6   145     6   145 0.99 -
-HBB_TRIIN            -            146 sp|P02185|MYG_PHYCD  -            142     8e-65  208.6   0.1   1   1   8.9e-65   8.9e-65  208.5   0.1     1   142     6   145     6   145 0.99 -
-HBB_TUPGL            -            146 sp|P02185|MYG_PHYCD  -            142   1.2e-62  201.6   0.0   1   1   1.3e-62   1.3e-62  201.5   0.0     1   142     6   145     6   145 0.99 -
-HBA_MESAU            -            141 sp|P02185|MYG_PHYCD  -            142   1.5e-61  198.0   0.6   1   1   1.7e-61   1.7e-61  197.8   0.6     2   142     6   140     5   140 0.99 -
-HBB1_VAREX           -            146 sp|P02185|MYG_PHYCD  -            142     3e-61  197.0   0.1   1   1   3.4e-61   3.4e-61  196.9   0.1     1   142     6   145     6   145 0.99 -
-HBA_MACFA            -            141 sp|P02185|MYG_PHYCD  -            142     6e-61  196.1   1.1   1   1   6.6e-61   6.6e-61  195.9   1.1     2   142     6   140     5   140 0.99 -
-HBA_MACSI            -            141 sp|P02185|MYG_PHYCD  -            142   9.7e-61  195.4   1.0   1   1   1.1e-60   1.1e-60  195.2   1.0     2   142     6   140     5   140 0.99 -
-HBA2_BOSMU           -            141 sp|P02185|MYG_PHYCD  -            142   3.2e-60  193.7   0.9   1   1   3.6e-60   3.6e-60  193.6   0.9     2   142     6   140     5   140 0.99 -
-HBA_PONPY            -            141 sp|P02185|MYG_PHYCD  -            142   3.2e-60  193.7   2.0   1   1   3.6e-60   3.6e-60  193.5   2.0     2   142     6   140     5   140 0.99 -
-HBA2_GALCR           -            141 sp|P02185|MYG_PHYCD  -            142   4.2e-60  193.3   1.5   1   1   4.7e-60   4.7e-60  193.2   1.5     2   142     6   140     5   140 0.99 -
-HBA_AILME            -            141 sp|P02185|MYG_PHYCD  -            142   5.7e-60  192.9   0.5   1   1   6.3e-60   6.3e-60  192.7   0.5     2   142     6   140     5   140 0.99 -
-HBA_FRAPO            -            141 sp|P02185|MYG_PHYCD  -            142   9.6e-60  192.2   0.6   1   1   1.1e-59   1.1e-59  192.0   0.6     2   142     6   140     5   140 0.99 -
-HBA_ANSSE            -            141 sp|P02185|MYG_PHYCD  -            142     1e-59  192.1   0.9   1   1   1.1e-59   1.1e-59  191.9   0.9     2   142     6   140     5   140 0.99 -
-HBA_PHACO            -            141 sp|P02185|MYG_PHYCD  -            142   2.2e-59  191.0   0.6   1   1   2.4e-59   2.4e-59  190.9   0.6     2   142     6   140     5   140 0.99 -
-HBA_PROLO            -            141 sp|P02185|MYG_PHYCD  -            142   2.4e-59  190.9   0.2   1   1   2.6e-59   2.6e-59  190.7   0.2     2   142     6   140     5   140 0.99 -
-HBA_ERIEU            -            141 sp|P02185|MYG_PHYCD  -            142     4e-59  190.1   0.3   1   1   4.5e-59   4.5e-59  190.0   0.3     2   142     6   140     5   140 0.99 -
-HBA_PAGLA            -            141 sp|P02185|MYG_PHYCD  -            142   4.2e-59  190.1   0.9   1   1   4.7e-59   4.7e-59  189.9   0.9     2   142     6   140     5   140 0.99 -
-HBA_TRIOC            -            141 sp|P02185|MYG_PHYCD  -            142   1.6e-58  188.2   0.6   1   1   1.8e-58   1.8e-58  188.0   0.6     2   142     6   140     5   140 0.99 -
-HBAD_CHLME           -            141 sp|P02185|MYG_PHYCD  -            142   3.9e-58  186.9   0.9   1   1   4.3e-58   4.3e-58  186.8   0.9     2   142     6   140     5   140 0.99 -
-HBA_COLLI            -            141 sp|P02185|MYG_PHYCD  -            142   3.5e-57  183.8   0.4   1   1   3.9e-57   3.9e-57  183.7   0.4     2   142     6   140     5   140 0.99 -
-HBBL_RANCA           -            146 sp|P02185|MYG_PHYCD  -            142   5.8e-57  183.1   0.2   1   1   6.5e-57   6.5e-57  183.0   0.2     1   142     6   145     6   145 0.99 -
-HBAD_PASMO           -            141 sp|P02185|MYG_PHYCD  -            142   6.3e-56  179.8   0.1   1   1     7e-56     7e-56  179.6   0.1     1   142     5   140     5   140 0.99 -
-HBAZ_HORSE           -            141 sp|P02185|MYG_PHYCD  -            142   9.4e-56  179.2   0.1   1   1     1e-55     1e-55  179.1   0.1     2   142     6   140     5   140 0.99 -
-HBB2_XENTR           -            146 sp|P02185|MYG_PHYCD  -            142     4e-55  177.2   0.7   1   1   4.4e-55   4.4e-55  177.0   0.7     1   142     6   145     6   145 0.99 -
-MYG_PROGU            -            153 sp|P02185|MYG_PHYCD  -            142   9.5e-55  176.0   1.6   1   1   1.1e-54   1.1e-54  175.8   1.6     2   142     6   146     5   146 1.00 -
-MYG_LYCPI            -            153 sp|P02185|MYG_PHYCD  -            142   2.6e-54  174.6   5.3   1   1   2.9e-54   2.9e-54  174.4   5.3     2   142     6   146     5   146 1.00 -
-MYG_MOUSE            -            153 sp|P02185|MYG_PHYCD  -            142   1.1e-53  172.5   1.6   1   1   1.2e-53   1.2e-53  172.4   1.6     2   142     6   146     5   146 1.00 -
-MYG_SAISC            -            153 sp|P02185|MYG_PHYCD  -            142   1.2e-53  172.4   4.3   1   1   1.4e-53   1.4e-53  172.2   4.3     2   142     6   146     5   146 1.00 -
-MYG_HORSE            -            153 sp|P02185|MYG_PHYCD  -            142   1.5e-53  172.1   4.2   1   1   1.7e-53   1.7e-53  171.9   4.2     2   142     6   146     5   146 1.00 -
-MYG_ESCGI            -            153 sp|P02185|MYG_PHYCD  -            142     5e-53  170.4   5.7   1   1   5.6e-53   5.6e-53  170.2   5.7     2   142     6   146     5   146 1.00 -
-HBA4_SALIR           -            142 sp|P02185|MYG_PHYCD  -            142   3.8e-52  167.5   0.1   1   1   4.2e-52   4.2e-52  167.4   0.1     2   142     6   141     5   141 0.99 -
-HBB2_TRICR           -            145 sp|P02185|MYG_PHYCD  -            142   5.2e-50  160.6   0.0   1   1   5.8e-50   5.8e-50  160.5   0.0     1   142     6   145     6   145 0.99 -
-MYG_MUSAN            -            148 sp|P02185|MYG_PHYCD  -            142   2.1e-45  145.7   0.4   1   1   2.3e-45   2.3e-45  145.5   0.4     2   142     2   141     1   141 0.99 -
-HBB_MANSP            -            146 sp|P02024|HBB_GORGO  -            143   1.4e-71  230.4   0.0   1   1   1.5e-71   1.5e-71  230.3   0.0     1   143     3   145     3   145 0.99 -
-HBB_URSMA            -            146 sp|P02024|HBB_GORGO  -            143   5.9e-71  228.4   0.1   1   1   6.6e-71   6.6e-71  228.2   0.1     1   143     3   145     3   145 0.99 -
-HBB_RABIT            -            146 sp|P02024|HBB_GORGO  -            143   5.8e-70  225.2   0.3   1   1   6.4e-70   6.4e-70  225.0   0.3     1   143     3   145     3   145 0.99 -
-HBB_SUNMU            -            146 sp|P02024|HBB_GORGO  -            143     2e-69  223.4   0.0   1   1   2.2e-69   2.2e-69  223.3   0.0     1   143     3   145     3   145 0.99 -
-HBB_CALAR            -            146 sp|P02024|HBB_GORGO  -            143   2.4e-69  223.1   0.1   1   1   2.7e-69   2.7e-69  223.0   0.1     1   143     3   145     3   145 0.99 -
-HBB_EQUHE            -            146 sp|P02024|HBB_GORGO  -            143   3.4e-69  222.7   0.1   1   1   3.8e-69   3.8e-69  222.5   0.1     1   143     3   145     3   145 0.99 -
-HBB_COLLI            -            146 sp|P02024|HBB_GORGO  -            143   4.2e-69  222.4   0.0   1   1   4.7e-69   4.7e-69  222.2   0.0     1   143     3   145     3   145 1.00 -
-HBB_TACAC            -            146 sp|P02024|HBB_GORGO  -            143   7.3e-69  221.6   0.1   1   1   8.1e-69   8.1e-69  221.4   0.1     1   143     3   145     3   145 0.99 -
-HBE_PONPY            -            146 sp|P02024|HBB_GORGO  -            143   1.3e-68  220.8   0.1   1   1   1.5e-68   1.5e-68  220.6   0.1     1   143     3   145     3   145 0.99 -
-HBB_SPECI            -            146 sp|P02024|HBB_GORGO  -            143     3e-68  219.6   0.4   1   1   3.3e-68   3.3e-68  219.5   0.4     1   143     3   145     3   145 0.99 -
-HBB_SPETO            -            146 sp|P02024|HBB_GORGO  -            143   5.3e-68  218.8   0.2   1   1   5.9e-68   5.9e-68  218.7   0.2     1   143     3   145     3   145 0.99 -
-HBB_ORNAN            -            146 sp|P02024|HBB_GORGO  -            143   1.3e-67  217.5   0.0   1   1   1.5e-67   1.5e-67  217.3   0.0     1   143     3   145     3   145 0.99 -
-HBB_TRIIN            -            146 sp|P02024|HBB_GORGO  -            143   1.4e-67  217.5   0.0   1   1   1.5e-67   1.5e-67  217.3   0.0     1   143     3   145     3   145 0.99 -
-HBB_LARRI            -            146 sp|P02024|HBB_GORGO  -            143   2.5e-67  216.6   0.0   1   1   2.8e-67   2.8e-67  216.5   0.0     1   143     3   145     3   145 1.00 -
-HBB_TUPGL            -            146 sp|P02024|HBB_GORGO  -            143   6.5e-66  212.0   0.0   1   1   7.2e-66   7.2e-66  211.9   0.0     1   143     3   145     3   145 0.99 -
-HBB1_VAREX           -            146 sp|P02024|HBB_GORGO  -            143     6e-65  208.9   0.0   1   1   6.6e-65   6.6e-65  208.8   0.0     1   143     3   145     3   145 1.00 -
-HBA_MESAU            -            141 sp|P02024|HBB_GORGO  -            143   1.9e-62  200.8   0.3   1   1   2.1e-62   2.1e-62  200.6   0.3     1   143     2   140     2   140 0.99 -
-HBA_PONPY            -            141 sp|P02024|HBB_GORGO  -            143   1.9e-61  197.6   0.7   1   1   2.1e-61   2.1e-61  197.4   0.7     1   143     2   140     2   140 0.98 -
-HBBL_RANCA           -            146 sp|P02024|HBB_GORGO  -            143   2.7e-61  197.0   0.1   1   1   3.1e-61   3.1e-61  196.9   0.1     1   143     3   145     3   145 1.00 -
-HBA_MACFA            -            141 sp|P02024|HBB_GORGO  -            143   3.6e-61  196.6   0.3   1   1   4.1e-61   4.1e-61  196.5   0.3     1   143     2   140     2   140 0.99 -
-HBA_MACSI            -            141 sp|P02024|HBB_GORGO  -            143   5.2e-61  196.1   0.2   1   1   5.8e-61   5.8e-61  196.0   0.2     1   143     2   140     2   140 0.99 -
-HBA_AILME            -            141 sp|P02024|HBB_GORGO  -            143     9e-61  195.4   0.1   1   1     1e-60     1e-60  195.2   0.1     1   143     2   140     2   140 0.99 -
-HBB2_XENTR           -            146 sp|P02024|HBB_GORGO  -            143   1.6e-60  194.6   0.4   1   1   1.8e-60   1.8e-60  194.4   0.4     1   143     3   145     3   145 0.99 -
-HBA2_GALCR           -            141 sp|P02024|HBB_GORGO  -            143   2.7e-60  193.8   0.5   1   1     3e-60     3e-60  193.7   0.5     1   143     2   140     2   140 0.98 -
-HBA_FRAPO            -            141 sp|P02024|HBB_GORGO  -            143     3e-60  193.7   0.4   1   1   3.3e-60   3.3e-60  193.5   0.4     1   143     2   140     2   140 0.99 -
-HBA_PHACO            -            141 sp|P02024|HBB_GORGO  -            143     3e-60  193.7   0.4   1   1   3.4e-60   3.4e-60  193.5   0.4     1   143     2   140     2   140 0.99 -
-HBA2_BOSMU           -            141 sp|P02024|HBB_GORGO  -            143   3.2e-60  193.6   0.3   1   1   3.5e-60   3.5e-60  193.4   0.3     1   143     2   140     2   140 0.99 -
-HBA_ERIEU            -            141 sp|P02024|HBB_GORGO  -            143     1e-59  191.9   0.1   1   1   1.1e-59   1.1e-59  191.8   0.1     1   143     2   140     2   140 0.98 -
-HBA_PROLO            -            141 sp|P02024|HBB_GORGO  -            143   1.4e-59  191.5   0.0   1   1   1.5e-59   1.5e-59  191.4   0.0     1   143     2   140     2   140 0.99 -
-HBA_ANSSE            -            141 sp|P02024|HBB_GORGO  -            143   1.6e-59  191.3   0.4   1   1   1.8e-59   1.8e-59  191.1   0.4     1   143     2   140     2   140 0.99 -
-HBA_PAGLA            -            141 sp|P02024|HBB_GORGO  -            143   1.7e-59  191.2   0.5   1   1   1.9e-59   1.9e-59  191.1   0.5     1   143     2   140     2   140 0.99 -
-HBA_TRIOC            -            141 sp|P02024|HBB_GORGO  -            143   1.1e-58  188.6   0.5   1   1   1.2e-58   1.2e-58  188.4   0.5     1   143     2   140     2   140 0.99 -
-HBAD_CHLME           -            141 sp|P02024|HBB_GORGO  -            143   2.9e-58  187.2   0.6   1   1   3.2e-58   3.2e-58  187.1   0.6     1   143     2   140     2   140 0.98 -
-HBAZ_HORSE           -            141 sp|P02024|HBB_GORGO  -            143   3.4e-58  187.0   0.1   1   1   3.8e-58   3.8e-58  186.9   0.1     1   143     2   140     2   140 0.98 -
-HBA_COLLI            -            141 sp|P02024|HBB_GORGO  -            143   6.7e-58  186.1   0.2   1   1   7.4e-58   7.4e-58  185.9   0.2     1   143     2   140     2   140 0.98 -
-HBAD_PASMO           -            141 sp|P02024|HBB_GORGO  -            143   8.9e-58  185.7   0.1   1   1   9.9e-58   9.9e-58  185.5   0.1     1   143     2   140     2   140 0.98 -
-MYG_LYCPI            -            153 sp|P02024|HBB_GORGO  -            143   1.1e-56  182.1   1.9   1   1   1.3e-56   1.3e-56  181.9   1.9     1   143     2   146     2   146 0.97 -
-MYG_SAISC            -            153 sp|P02024|HBB_GORGO  -            143   1.1e-56  182.1   1.1   1   1   1.3e-56   1.3e-56  181.9   1.1     1   143     2   146     2   146 0.98 -
-MYG_ESCGI            -            153 sp|P02024|HBB_GORGO  -            143   2.5e-56  181.0   1.7   1   1   2.8e-56   2.8e-56  180.8   1.7     1   143     2   146     2   146 0.97 -
-MYG_PROGU            -            153 sp|P02024|HBB_GORGO  -            143   3.2e-56  180.6   0.2   1   1   3.6e-56   3.6e-56  180.4   0.2     1   143     2   146     2   146 0.97 -
-MYG_HORSE            -            153 sp|P02024|HBB_GORGO  -            143   9.5e-56  179.1   1.0   1   1   1.1e-55   1.1e-55  178.9   1.0     1   143     2   146     2   146 0.97 -
-MYG_MOUSE            -            153 sp|P02024|HBB_GORGO  -            143   1.8e-55  178.2   0.3   1   1     2e-55     2e-55  178.0   0.3     1   143     2   146     2   146 0.97 -
-HBA4_SALIR           -            142 sp|P02024|HBB_GORGO  -            143   3.4e-55  177.3   0.1   1   1   3.8e-55   3.8e-55  177.1   0.1     1   143     2   141     2   141 0.98 -
-HBB2_TRICR           -            145 sp|P02024|HBB_GORGO  -            143   1.8e-53  171.7   0.0   1   1     2e-53     2e-53  171.6   0.0     1   143     3   145     3   145 0.99 -
-MYG_MUSAN            -            148 sp|P02024|HBB_GORGO  -            143     1e-44  143.3   0.3   1   1   1.1e-44   1.1e-44  143.2   0.3     5   143     2   141     1   141 0.96 -
+HBB_MANSP            -            146 sp|P02185|MYG_PHYCD  -            154   1.5e-69  224.0   0.1   1   1   1.7e-69   1.7e-69  223.9   0.1     3   147     3   145     1   146 0.99 -
+HBB_URSMA            -            146 sp|P02185|MYG_PHYCD  -            154   4.6e-69  222.5   0.2   1   1     5e-69     5e-69  222.3   0.2     3   147     3   145     1   146 0.99 -
+HBB_RABIT            -            146 sp|P02185|MYG_PHYCD  -            154   2.5e-68  220.1   0.6   1   1   2.7e-68   2.7e-68  220.0   0.6     3   147     3   145     1   146 0.99 -
+HBB_SUNMU            -            146 sp|P02185|MYG_PHYCD  -            154   7.6e-68  218.5   0.0   1   1   8.3e-68   8.3e-68  218.4   0.0     3   147     3   145     1   146 0.99 -
+HBB_COLLI            -            146 sp|P02185|MYG_PHYCD  -            154   9.5e-68  218.2   0.0   1   1   1.1e-67   1.1e-67  217.9   0.0     4   147     4   145     2   146 0.99 -
+HBB_EQUHE            -            146 sp|P02185|MYG_PHYCD  -            154   1.4e-67  217.6   0.1   1   1   1.6e-67   1.6e-67  217.5   0.1     3   147     3   145     1   146 0.98 -
+HBB_TACAC            -            146 sp|P02185|MYG_PHYCD  -            154   1.5e-67  217.6   0.3   1   1   1.6e-67   1.6e-67  217.4   0.3     3   147     3   145     1   146 0.99 -
+HBB_SPECI            -            146 sp|P02185|MYG_PHYCD  -            154   3.3e-67  216.5   0.7   1   1   3.6e-67   3.6e-67  216.3   0.7     3   147     3   145     1   146 0.98 -
+HBB_CALAR            -            146 sp|P02185|MYG_PHYCD  -            154   3.4e-67  216.4   0.1   1   1   3.8e-67   3.8e-67  216.3   0.1     3   147     3   145     1   146 0.99 -
+HBB_SPETO            -            146 sp|P02185|MYG_PHYCD  -            154   3.7e-67  216.3   0.4   1   1   4.1e-67   4.1e-67  216.1   0.4     3   147     3   145     1   146 0.98 -
+HBB_ORNAN            -            146 sp|P02185|MYG_PHYCD  -            154   6.6e-67  215.5   0.0   1   1   7.2e-67   7.2e-67  215.3   0.0     3   147     3   145     1   146 0.99 -
+HBE_PONPY            -            146 sp|P02185|MYG_PHYCD  -            154   8.4e-67  215.1   0.3   1   1   9.2e-67   9.2e-67  215.0   0.3     4   147     4   145     1   146 0.98 -
+MYG_ESCGI            -            153 sp|P02185|MYG_PHYCD  -            154   2.3e-66  213.7   1.7   1   1   2.6e-66   2.6e-66  213.5   1.7     2   154     1   153     1   153 1.00 -
+HBB_TRIIN            -            146 sp|P02185|MYG_PHYCD  -            154   2.9e-66  213.4   0.1   1   1   3.2e-66   3.2e-66  213.2   0.1     3   147     3   145     1   146 0.99 -
+HBB_LARRI            -            146 sp|P02185|MYG_PHYCD  -            154   5.3e-66  212.5   0.0   1   1   6.4e-66   6.4e-66  212.3   0.0     4   147     4   145     2   146 0.99 -
+MYG_LYCPI            -            153 sp|P02185|MYG_PHYCD  -            154   8.7e-66  211.8   1.6   1   1   9.6e-66   9.6e-66  211.7   1.6     3   154     2   153     1   153 1.00 -
+MYG_PROGU            -            153 sp|P02185|MYG_PHYCD  -            154   1.8e-65  210.8   0.2   1   1     2e-65     2e-65  210.6   0.2     3   154     2   153     1   153 1.00 -
+MYG_SAISC            -            153 sp|P02185|MYG_PHYCD  -            154   2.5e-65  210.3   0.9   1   1   2.8e-65   2.8e-65  210.2   0.9     3   154     2   153     1   153 1.00 -
+MYG_HORSE            -            153 sp|P02185|MYG_PHYCD  -            154   2.6e-65  210.3   0.8   1   1   2.9e-65   2.9e-65  210.1   0.8     3   154     2   153     1   153 1.00 -
+HBA_MESAU            -            141 sp|P02185|MYG_PHYCD  -            154   9.1e-65  208.5   0.2   1   1     1e-64     1e-64  208.4   0.2     2   148     1   141     1   141 0.99 -
+MYG_MOUSE            -            153 sp|P02185|MYG_PHYCD  -            154   1.3e-64  208.0   0.3   1   1   1.4e-64   1.4e-64  207.9   0.3     3   154     2   153     1   153 1.00 -
+HBB_TUPGL            -            146 sp|P02185|MYG_PHYCD  -            154   1.5e-64  207.8   0.0   1   1   1.7e-64   1.7e-64  207.6   0.0     3   147     3   145     1   146 0.98 -
+HBA_PONPY            -            141 sp|P02185|MYG_PHYCD  -            154   1.3e-63  204.7   0.5   1   1   1.5e-63   1.5e-63  204.6   0.5     2   148     1   141     1   141 0.99 -
+HBA_MACFA            -            141 sp|P02185|MYG_PHYCD  -            154   2.9e-63  203.6   0.2   1   1   3.2e-63   3.2e-63  203.5   0.2     2   148     1   141     1   141 0.99 -
+HBA_MACSI            -            141 sp|P02185|MYG_PHYCD  -            154     4e-63  203.2   0.2   1   1   4.4e-63   4.4e-63  203.0   0.2     2   148     1   141     1   141 0.99 -
+HBB1_VAREX           -            146 sp|P02185|MYG_PHYCD  -            154     5e-63  202.9   0.1   1   1   5.9e-63   5.9e-63  202.6   0.1     4   147     4   145     2   146 0.98 -
+HBA_AILME            -            141 sp|P02185|MYG_PHYCD  -            154   5.7e-63  202.7   0.1   1   1   6.4e-63   6.4e-63  202.5   0.1     2   148     1   141     1   141 0.99 -
+HBA2_BOSMU           -            141 sp|P02185|MYG_PHYCD  -            154   8.6e-63  202.1   0.3   1   1   9.6e-63   9.6e-63  201.9   0.3     2   148     1   141     1   141 0.99 -
+HBA_FRAPO            -            141 sp|P02185|MYG_PHYCD  -            154   1.8e-62  201.0   0.3   1   1     2e-62     2e-62  200.9   0.3     2   148     1   141     1   141 0.99 -
+HBA2_GALCR           -            141 sp|P02185|MYG_PHYCD  -            154   1.9e-62  201.0   0.4   1   1   2.1e-62   2.1e-62  200.8   0.4     2   148     1   141     1   141 0.99 -
+HBA_PHACO            -            141 sp|P02185|MYG_PHYCD  -            154   2.1e-62  200.8   0.3   1   1   2.4e-62   2.4e-62  200.7   0.3     2   148     1   141     1   141 0.99 -
+HBA_ANSSE            -            141 sp|P02185|MYG_PHYCD  -            154     4e-62  199.9   0.3   1   1   4.4e-62   4.4e-62  199.8   0.3     2   148     1   141     1   141 0.99 -
+HBA_ERIEU            -            141 sp|P02185|MYG_PHYCD  -            154     4e-62  199.9   0.1   1   1   4.5e-62   4.5e-62  199.8   0.1     2   148     1   141     1   141 0.99 -
+HBA_PAGLA            -            141 sp|P02185|MYG_PHYCD  -            154   8.3e-62  198.9   0.3   1   1   9.2e-62   9.2e-62  198.8   0.3     2   148     1   141     1   141 0.99 -
+HBA_PROLO            -            141 sp|P02185|MYG_PHYCD  -            154   9.5e-62  198.7   0.0   1   1   1.1e-61   1.1e-61  198.6   0.0     2   148     1   141     1   141 0.99 -
+HBA_TRIOC            -            141 sp|P02185|MYG_PHYCD  -            154   2.2e-61  197.5   0.4   1   1   2.4e-61   2.4e-61  197.4   0.4     2   148     1   141     1   141 0.99 -
+HBAD_CHLME           -            141 sp|P02185|MYG_PHYCD  -            154   1.2e-60  195.1   0.5   1   1   1.3e-60   1.3e-60  195.0   0.5     3   148     2   141     1   141 0.99 -
+HBAZ_HORSE           -            141 sp|P02185|MYG_PHYCD  -            154   4.1e-60  193.4   0.1   1   1   4.5e-60   4.5e-60  193.3   0.1     3   148     2   141     1   141 0.99 -
+HBA_COLLI            -            141 sp|P02185|MYG_PHYCD  -            154     6e-60  192.9   0.2   1   1   6.7e-60   6.7e-60  192.7   0.2     2   148     1   141     1   141 0.99 -
+HBBL_RANCA           -            146 sp|P02185|MYG_PHYCD  -            154   1.7e-59  191.4   0.2   1   1     2e-59     2e-59  191.2   0.2     4   147     4   145     2   146 0.98 -
+HBAD_PASMO           -            141 sp|P02185|MYG_PHYCD  -            154   2.2e-59  191.0   0.1   1   1   2.4e-59   2.4e-59  190.9   0.1     3   148     2   141     1   141 0.99 -
+HBB2_XENTR           -            146 sp|P02185|MYG_PHYCD  -            154   1.1e-58  188.8   0.6   1   1   1.3e-58   1.3e-58  188.6   0.6     4   147     4   145     2   146 0.98 -
+HBA4_SALIR           -            142 sp|P02185|MYG_PHYCD  -            154   5.3e-56  180.0   0.1   1   1   5.9e-56   5.9e-56  179.9   0.1     3   148     2   142     1   142 0.99 -
+MYG_MUSAN            -            148 sp|P02185|MYG_PHYCD  -            154   2.5e-54  174.6   0.4   1   1   2.8e-54   2.8e-54  174.5   0.4     7   154     2   148     1   148 0.99 -
+HBB2_TRICR           -            145 sp|P02185|MYG_PHYCD  -            154     2e-52  168.4   0.0   1   1   2.2e-52   2.2e-52  168.3   0.0     3   147     3   145     1   145 0.99 -
+HBB_MANSP            -            146 sp|P02024|HBB_GORGO  -            147   3.6e-74  238.9   0.1   1   1     4e-74     4e-74  238.8   0.1     2   147     1   146     1   146 1.00 -
+HBB_URSMA            -            146 sp|P02024|HBB_GORGO  -            147   1.7e-73  236.7   0.3   1   1   1.9e-73   1.9e-73  236.6   0.3     2   147     1   146     1   146 1.00 -
+HBB_RABIT            -            146 sp|P02024|HBB_GORGO  -            147   2.2e-72  233.1   0.8   1   1   2.4e-72   2.4e-72  233.0   0.8     2   147     1   146     1   146 1.00 -
+HBB_SUNMU            -            146 sp|P02024|HBB_GORGO  -            147   5.4e-72  231.8   0.1   1   1     6e-72     6e-72  231.7   0.1     2   147     1   146     1   146 1.00 -
+HBB_CALAR            -            146 sp|P02024|HBB_GORGO  -            147     7e-72  231.5   0.2   1   1   7.7e-72   7.7e-72  231.3   0.2     2   147     1   146     1   146 1.00 -
+HBB_COLLI            -            146 sp|P02024|HBB_GORGO  -            147   9.6e-72  231.0   0.0   1   1   1.1e-71   1.1e-71  230.9   0.0     2   147     1   146     1   146 1.00 -
+HBB_TACAC            -            146 sp|P02024|HBB_GORGO  -            147   2.5e-71  229.7   0.4   1   1   2.8e-71   2.8e-71  229.6   0.4     2   147     1   146     1   146 1.00 -
+HBE_PONPY            -            146 sp|P02024|HBB_GORGO  -            147   4.8e-71  228.8   0.4   1   1   5.3e-71   5.3e-71  228.6   0.4     2   147     1   146     1   146 1.00 -
+HBB_EQUHE            -            146 sp|P02024|HBB_GORGO  -            147   5.1e-71  228.7   0.2   1   1   5.7e-71   5.7e-71  228.5   0.2     2   147     1   146     1   146 0.99 -
+HBB_SPECI            -            146 sp|P02024|HBB_GORGO  -            147   1.3e-70  227.3   1.0   1   1   1.5e-70   1.5e-70  227.2   1.0     2   147     1   146     1   146 1.00 -
+HBB_SPETO            -            146 sp|P02024|HBB_GORGO  -            147     2e-70  226.8   0.6   1   1   2.2e-70   2.2e-70  226.6   0.6     2   147     1   146     1   146 1.00 -
+HBB_TRIIN            -            146 sp|P02024|HBB_GORGO  -            147   3.7e-70  225.9   0.1   1   1   4.1e-70   4.1e-70  225.8   0.1     2   147     1   146     1   146 1.00 -
+HBB_ORNAN            -            146 sp|P02024|HBB_GORGO  -            147   4.1e-70  225.7   0.0   1   1   4.6e-70   4.6e-70  225.6   0.0     2   147     1   146     1   146 1.00 -
+HBB_LARRI            -            146 sp|P02024|HBB_GORGO  -            147   5.7e-70  225.3   0.0   1   1   6.4e-70   6.4e-70  225.1   0.0     2   147     1   146     1   146 1.00 -
+HBB_TUPGL            -            146 sp|P02024|HBB_GORGO  -            147   1.8e-68  220.5   0.0   1   1   1.9e-68   1.9e-68  220.3   0.0     2   147     1   146     1   146 1.00 -
+HBB1_VAREX           -            146 sp|P02024|HBB_GORGO  -            147   1.5e-67  217.4   0.1   1   1   1.7e-67   1.7e-67  217.3   0.1     2   147     1   146     1   146 1.00 -
+HBBL_RANCA           -            146 sp|P02024|HBB_GORGO  -            147   7.8e-64  205.4   0.3   1   1   8.7e-64   8.7e-64  205.2   0.3     2   147     1   146     1   146 1.00 -
+HBA_MESAU            -            141 sp|P02024|HBB_GORGO  -            147   4.5e-63  202.9   0.3   1   1     5e-63     5e-63  202.8   0.3     4   146     2   140     1   141 0.99 -
+HBB2_XENTR           -            146 sp|P02024|HBB_GORGO  -            147     2e-62  200.8   0.8   1   1   2.3e-62   2.3e-62  200.6   0.8     2   146     1   145     1   146 1.00 -
+HBA_PONPY            -            141 sp|P02024|HBB_GORGO  -            147   4.6e-62  199.6   0.7   1   1     5e-62     5e-62  199.5   0.7     4   146     2   140     1   141 0.98 -
+HBA_MACFA            -            141 sp|P02024|HBB_GORGO  -            147   8.7e-62  198.7   0.3   1   1   9.6e-62   9.6e-62  198.6   0.3     4   146     2   140     1   141 0.99 -
+HBA_MACSI            -            141 sp|P02024|HBB_GORGO  -            147   1.3e-61  198.2   0.3   1   1   1.4e-61   1.4e-61  198.1   0.3     4   146     2   140     1   141 0.99 -
+HBA_AILME            -            141 sp|P02024|HBB_GORGO  -            147   2.1e-61  197.5   0.1   1   1   2.4e-61   2.4e-61  197.3   0.1     4   146     2   140     1   141 0.99 -
+HBA2_GALCR           -            141 sp|P02024|HBB_GORGO  -            147   6.6e-61  195.9   0.6   1   1   7.3e-61   7.3e-61  195.7   0.6     4   146     2   140     1   141 0.98 -
+HBA_FRAPO            -            141 sp|P02024|HBB_GORGO  -            147   7.1e-61  195.8   0.4   1   1   7.8e-61   7.8e-61  195.7   0.4     4   146     2   140     1   141 0.98 -
+HBA_PHACO            -            141 sp|P02024|HBB_GORGO  -            147   7.3e-61  195.7   0.4   1   1     8e-61     8e-61  195.6   0.4     4   146     2   140     1   141 0.99 -
+HBA2_BOSMU           -            141 sp|P02024|HBB_GORGO  -            147   7.6e-61  195.7   0.4   1   1   8.3e-61   8.3e-61  195.6   0.4     4   146     2   140     1   141 0.99 -
+HBA_ERIEU            -            141 sp|P02024|HBB_GORGO  -            147   2.4e-60  194.0   0.1   1   1   2.7e-60   2.7e-60  193.9   0.1     4   146     2   140     1   141 0.98 -
+HBA_PROLO            -            141 sp|P02024|HBB_GORGO  -            147   3.3e-60  193.6   0.0   1   1   3.6e-60   3.6e-60  193.5   0.0     4   146     2   140     1   141 0.99 -
+HBA_ANSSE            -            141 sp|P02024|HBB_GORGO  -            147   3.9e-60  193.4   0.4   1   1   4.3e-60   4.3e-60  193.2   0.4     4   146     2   140     1   141 0.99 -
+HBA_PAGLA            -            141 sp|P02024|HBB_GORGO  -            147   4.1e-60  193.3   0.5   1   1   4.5e-60   4.5e-60  193.2   0.5     4   146     2   140     1   141 0.98 -
+HBA_TRIOC            -            141 sp|P02024|HBB_GORGO  -            147   2.7e-59  190.7   0.5   1   1   2.9e-59   2.9e-59  190.5   0.5     4   146     2   140     1   141 0.98 -
+HBAD_CHLME           -            141 sp|P02024|HBB_GORGO  -            147   6.3e-59  189.4   0.5   1   1     7e-59     7e-59  189.3   0.5     4   146     2   140     1   141 0.98 -
+HBAZ_HORSE           -            141 sp|P02024|HBB_GORGO  -            147   7.5e-59  189.2   0.1   1   1   8.2e-59   8.2e-59  189.1   0.1     4   146     2   140     1   141 0.98 -
+HBA_COLLI            -            141 sp|P02024|HBB_GORGO  -            147   1.6e-58  188.1   0.2   1   1   1.8e-58   1.8e-58  188.0   0.2     4   146     2   140     1   141 0.98 -
+HBAD_PASMO           -            141 sp|P02024|HBB_GORGO  -            147     2e-58  187.8   0.1   1   1   2.2e-58   2.2e-58  187.7   0.1     4   146     2   140     1   141 0.98 -
+MYG_SAISC            -            153 sp|P02024|HBB_GORGO  -            147   2.9e-57  184.1   1.0   1   1   3.2e-57   3.2e-57  183.9   1.0     4   146     2   146     1   147 0.98 -
+MYG_LYCPI            -            153 sp|P02024|HBB_GORGO  -            147     3e-57  184.0   1.9   1   1   3.3e-57   3.3e-57  183.9   1.9     4   146     2   146     1   147 0.97 -
+MYG_PROGU            -            153 sp|P02024|HBB_GORGO  -            147   8.3e-57  182.6   0.2   1   1   9.2e-57   9.2e-57  182.4   0.2     4   146     2   146     1   147 0.97 -
+MYG_ESCGI            -            153 sp|P02024|HBB_GORGO  -            147   8.8e-57  182.5   2.3   1   1   9.7e-57   9.7e-57  182.4   2.3     4   146     2   146     1   147 0.97 -
+MYG_HORSE            -            153 sp|P02024|HBB_GORGO  -            147   2.5e-56  181.0   1.0   1   1   2.7e-56   2.7e-56  180.9   1.0     4   146     2   146     1   147 0.97 -
+MYG_MOUSE            -            153 sp|P02024|HBB_GORGO  -            147   4.7e-56  180.1   0.3   1   1   5.2e-56   5.2e-56  180.0   0.3     4   146     2   146     1   147 0.97 -
+HBA4_SALIR           -            142 sp|P02024|HBB_GORGO  -            147   7.5e-56  179.5   0.1   1   1   8.3e-56   8.3e-56  179.3   0.1     4   146     2   141     1   142 0.98 -
+HBB2_TRICR           -            145 sp|P02024|HBB_GORGO  -            147   2.7e-55  177.7   0.0   1   1     3e-55     3e-55  177.5   0.0     2   146     1   145     1   145 1.00 -
+MYG_MUSAN            -            148 sp|P02024|HBB_GORGO  -            147   4.6e-45  144.5   0.3   1   1   5.1e-45   5.1e-45  144.3   0.3     8   146     2   141     1   142 0.96 -
 #
 # Program:         jackhmmer
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SEARCH
-# Query file:      /tmp/tmphb1nFG/files/000/dataset_1.dat
-# Target file:     /tmp/tmphb1nFG/files/000/dataset_2.dat
-# Option settings: jackhmmer -N 5 --tblout /tmp/tmphb1nFG/files/000/dataset_4.dat --domtblout /tmp/tmphb1nFG/files/000/dataset_5.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --fast --hand --symfrac 0.5 --wpb --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmphb1nFG/files/000/dataset_1.dat /tmp/tmphb1nFG/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmphb1nFG/job_working_directory/000/3
-# Date:            Sat Jun 25 19:33:04 2016
+# Query file:      /tmp/tmpw5_nj0/files/000/dataset_1.dat
+# Target file:     /tmp/tmpw5_nj0/files/000/dataset_2.dat
+# Option settings: jackhmmer -N 5 --tblout /tmp/tmpw5_nj0/files/000/dataset_4.dat --domtblout /tmp/tmpw5_nj0/files/000/dataset_5.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --wpb --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmpw5_nj0/files/000/dataset_1.dat /tmp/tmpw5_nj0/files/000/dataset_2.dat 
+# Current dir:     /tmp/tmpw5_nj0/job_working_directory/000/3/working
+# Date:            Mon Jun 11 17:59:06 2018
 # [ok]
--- a/test-data/jackhmmer.out	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/jackhmmer.out	Mon Jun 11 15:52:05 2018 -0400
@@ -1,18 +1,17 @@
 # jackhmmer :: iteratively search a protein sequence against a protein database
-# HMMER 3.1b1 (May 2013); http://hmmer.org/
-# Copyright (C) 2013 Howard Hughes Medical Institute.
-# Freely distributed under the GNU General Public License (GPLv3).
+# HMMER 3.2 (June 2018); http://hmmer.org/
+# Copyright (C) 2018 Howard Hughes Medical Institute.
+# Freely distributed under the BSD open source license.
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-# query sequence file:             /tmp/tmpwsYozTfiles/000/dataset_31.dat
-# target sequence database:        /tmp/tmpwsYozTfiles/000/dataset_32.dat
-# per-seq hits tabular output:     /tmp/tmpwsYozTfiles/000/dataset_34.dat
-# per-dom hits tabular output:     /tmp/tmpwsYozTfiles/000/dataset_35.dat
+# query sequence file:             /tmp/tmpw5_nj0/files/000/dataset_1.dat
+# target sequence database:        /tmp/tmpw5_nj0/files/000/dataset_2.dat
+# per-seq hits tabular output:     /tmp/tmpw5_nj0/files/000/dataset_4.dat
+# per-dom hits tabular output:     /tmp/tmpw5_nj0/files/000/dataset_5.dat
 # max ASCII text line length:      unlimited
 # Vit filter P threshold:       <= 0.001
 # Fwd filter P threshold:       <= 1e-05
-# model architecture construction: fast/heuristic
 # random number seed set to:       4
-# number of worker threads:        2
+# number of worker threads:        1
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
 Query:       sp|P02185|MYG_PHYCD  [L=154]
@@ -601,16 +600,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (154 nodes)
-Target sequences:                           45  (6519 residues searched)
+Query model(s):                            1  (154 nodes)
+Target sequences:                         45  (6519 residues searched)
 Passed MSV filter:                        45  (1); expected 0.9 (0.02)
 Passed bias filter:                       45  (1); expected 0.9 (0.02)
 Passed Vit filter:                        45  (1); expected 0.0 (0.001)
 Passed Fwd filter:                        44  (0.977778); expected 0.0 (1e-05)
 Initial search space (Z):                 45  [actual number of targets]
 Domain search space  (domZ):              44  [number of targets reported over threshold]
-# CPU time: 0.05u 0.00s 00:00:00.05 Elapsed: 00:00:00.13
-# Mc/sec: 7.72
+# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
+# Mc/sec: 31.40
 
 @@ New targets included:   44
 @@ New alignment includes: 45 subseqs (was 1), including original query
@@ -619,660 +618,660 @@
 @@
 @@ Round:                  2
 @@ Included in MSA:        45 subsequences (query + 44 subseqs from 44 targets)
-@@ Model size:             142 positions
+@@ Model size:             154 positions
 @@
 
 Scores for complete sequences (score includes all domains):
    --- full sequence ---   --- best 1 domain ---    -#dom-
     E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
     ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
-    6.1e-66  212.1   0.1    6.8e-66  211.9   0.1    1.0  1  HBB_MANSP   
-    2.2e-65  210.2   0.1    2.5e-65  210.1   0.1    1.0  1  HBB_URSMA   
-    1.2e-64  207.8   0.0    1.4e-64  207.7   0.0    1.0  1  HBB_COLLI   
-    1.3e-64  207.7   0.3    1.5e-64  207.6   0.3    1.0  1  HBB_RABIT   
-    2.5e-64  206.8   0.0    2.8e-64  206.7   0.0    1.0  1  HBB_SUNMU   
-    3.6e-64  206.3   0.1    4.1e-64  206.1   0.1    1.0  1  HBB_EQUHE   
-    5.1e-64  205.8   0.4    5.7e-64  205.7   0.4    1.0  1  HBB_SPECI   
-    6.3e-64  205.5   0.2    7.1e-64  205.4   0.2    1.0  1  HBB_TACAC   
-      7e-64  205.4   0.1    7.9e-64  205.2   0.1    1.0  1  HBE_PONPY   
-    9.7e-64  204.9   0.2    1.1e-63  204.8   0.2    1.0  1  HBB_SPETO   
-    1.6e-63  204.2   0.1    1.8e-63  204.1   0.1    1.0  1  HBB_CALAR   
-    4.9e-63  202.7   0.0    5.4e-63  202.5   0.0    1.0  1  HBB_ORNAN   
-    8.4e-63  201.9   0.0    9.5e-63  201.7   0.0    1.0  1  HBB_LARRI   
-    1.2e-62  201.4   0.1    1.3e-62  201.2   0.1    1.0  1  HBB_TRIIN   
-    3.4e-62  199.9   0.2    3.9e-62  199.7   0.2    1.0  1  HBA_MESAU   
-    1.3e-61  198.1   0.8    1.4e-61  197.9   0.8    1.0  1  HBA_PONPY   
-    2.5e-61  197.1   2.3    2.8e-61  197.0   2.3    1.0  1  MYG_ESCGI   
-    3.4e-61  196.7   0.3    3.8e-61  196.5   0.3    1.0  1  HBA_MACFA   
-    4.2e-61  196.4   0.3    4.7e-61  196.2   0.3    1.0  1  HBA_MACSI   
-    5.5e-61  196.0   2.5    6.2e-61  195.8   2.5    1.0  1  MYG_LYCPI   
-    6.1e-61  195.8   0.1    6.8e-61  195.7   0.1    1.0  1  HBA_AILME   
-    7.1e-61  195.6   0.3      8e-61  195.5   0.3    1.0  1  MYG_PROGU   
-    9.2e-61  195.3   0.0      1e-60  195.1   0.0    1.0  1  HBB_TUPGL   
-    1.2e-60  194.9   1.5    1.3e-60  194.7   1.5    1.0  1  MYG_HORSE   
-    1.9e-60  194.2   0.6    2.2e-60  194.1   0.6    1.0  1  HBA2_GALCR  
-    2.5e-60  193.9   0.3    2.8e-60  193.7   0.3    1.0  1  HBA_FRAPO   
-    2.6e-60  193.8   0.4    2.9e-60  193.7   0.4    1.0  1  HBA_PHACO   
-    2.7e-60  193.8   1.5      3e-60  193.6   1.5    1.0  1  MYG_SAISC   
-    2.8e-60  193.7   0.2    3.1e-60  193.6   0.2    1.0  1  HBA2_BOSMU  
-      4e-60  193.2   0.0    4.5e-60  193.0   0.0    1.0  1  HBB1_VAREX  
-    5.8e-60  192.7   0.5    6.6e-60  192.5   0.5    1.0  1  MYG_MOUSE   
-    9.1e-60  192.0   0.4      1e-59  191.9   0.4    1.0  1  HBA_ANSSE   
-      1e-59  191.9   0.4    1.1e-59  191.7   0.4    1.0  1  HBA_PAGLA   
-    1.3e-59  191.6   0.1    1.4e-59  191.4   0.1    1.0  1  HBA_ERIEU   
-    1.3e-59  191.5   0.0    1.5e-59  191.4   0.0    1.0  1  HBA_PROLO   
-    3.5e-59  190.1   0.4    3.9e-59  190.0   0.4    1.0  1  HBA_TRIOC   
-    1.2e-58  188.4   0.5    1.4e-58  188.2   0.5    1.0  1  HBAD_CHLME  
-    2.2e-58  187.6   0.0    2.5e-58  187.4   0.0    1.0  1  HBAZ_HORSE  
-    1.8e-57  184.6   0.2      2e-57  184.4   0.2    1.0  1  HBA_COLLI   
-    3.4e-57  183.7   0.1    3.9e-57  183.5   0.1    1.0  1  HBAD_PASMO  
-    4.1e-56  180.2   0.1    4.7e-56  180.0   0.1    1.0  1  HBBL_RANCA  
-    5.6e-55  176.5   0.4    6.2e-55  176.4   0.4    1.0  1  HBB2_XENTR  
-    2.7e-52  167.8   0.1      3e-52  167.7   0.1    1.0  1  HBA4_SALIR  
-    3.1e-51  164.4   0.3    3.5e-51  164.2   0.3    1.0  1  MYG_MUSAN   
-+   4.9e-37  118.4   0.0    5.4e-37  118.2   0.0    1.0  1  HBB2_TRICR  
+    4.5e-68  219.3   2.1    4.9e-68  219.1   2.1    1.0  1  MYG_ESCGI   
+    5.1e-68  219.1   0.1    5.6e-68  218.9   0.1    1.0  1  HBB_MANSP   
+    1.6e-67  217.5   2.0    1.7e-67  217.3   2.0    1.0  1  MYG_LYCPI   
+    2.2e-67  217.0   0.2    2.4e-67  216.9   0.2    1.0  1  HBB_URSMA   
+    2.7e-67  216.7   0.3      3e-67  216.6   0.3    1.0  1  MYG_PROGU   
+    3.6e-67  216.3   1.1      4e-67  216.2   1.1    1.0  1  MYG_HORSE   
+      4e-67  216.2   0.7    4.4e-67  216.0   0.7    1.0  1  HBB_RABIT   
+    8.5e-67  215.1   0.8    9.4e-67  215.0   0.8    1.0  1  HBB_SPECI   
+    8.6e-67  215.1   1.2    9.5e-67  214.9   1.2    1.0  1  MYG_SAISC   
+    9.6e-67  214.9   0.1      1e-66  214.8   0.1    1.0  1  HBB_SUNMU   
+    1.2e-66  214.6   0.0    1.3e-66  214.4   0.0    1.0  1  HBB_COLLI   
+    1.4e-66  214.4   0.1    1.5e-66  214.3   0.1    1.0  1  HBB_EQUHE   
+    2.2e-66  213.7   0.4    2.5e-66  213.6   0.4    1.0  1  MYG_MOUSE   
+    3.7e-66  213.0   0.3      4e-66  212.9   0.3    1.0  1  HBB_TACAC   
+      4e-66  212.9   0.5    4.4e-66  212.8   0.5    1.0  1  HBB_SPETO   
+    1.3e-65  211.2   0.4    1.5e-65  211.1   0.4    1.0  1  HBE_PONPY   
+    1.6e-65  211.0   0.1    1.7e-65  210.9   0.1    1.0  1  HBB_CALAR   
+    2.2e-65  210.5   0.0    2.4e-65  210.4   0.0    1.0  1  HBB_ORNAN   
+    4.2e-65  209.6   0.2    4.6e-65  209.5   0.2    1.0  1  HBA_MESAU   
+    8.8e-65  208.5   0.0    9.6e-65  208.4   0.0    1.0  1  HBB_LARRI   
+    1.1e-64  208.2   0.1    1.2e-64  208.1   0.1    1.0  1  HBB_TRIIN   
+    1.7e-64  207.6   0.5    1.9e-64  207.4   0.5    1.0  1  HBA_PONPY   
+    4.9e-64  206.1   0.2    5.5e-64  206.0   0.2    1.0  1  HBA_MACFA   
+    6.2e-64  205.8   0.2    6.8e-64  205.7   0.2    1.0  1  HBA_MACSI   
+    9.2e-64  205.2   0.1      1e-63  205.1   0.1    1.0  1  HBA_AILME   
+    3.1e-63  203.5   0.3    3.4e-63  203.4   0.3    1.0  1  HBA_FRAPO   
+    3.1e-63  203.5   0.3    3.5e-63  203.4   0.3    1.0  1  HBA_PHACO   
+    3.4e-63  203.4   0.3    3.8e-63  203.2   0.3    1.0  1  HBA2_BOSMU  
+    3.7e-63  203.3   0.4    4.1e-63  203.1   0.4    1.0  1  HBA2_GALCR  
+    3.8e-63  203.3   0.0    4.1e-63  203.1   0.0    1.0  1  HBB_TUPGL   
+    1.1e-62  201.7   0.4    1.2e-62  201.6   0.4    1.0  1  HBA_ANSSE   
+    1.1e-62  201.7   0.3    1.2e-62  201.6   0.3    1.0  1  HBA_PAGLA   
+      2e-62  200.9   0.1    2.2e-62  200.8   0.1    1.0  1  HBA_ERIEU   
+    2.1e-62  200.8   0.0    2.3e-62  200.7   0.0    1.0  1  HBA_PROLO   
+    4.2e-62  199.9   0.4    4.6e-62  199.7   0.4    1.0  1  HBA_TRIOC   
+    9.3e-62  198.7   0.1    1.1e-61  198.5   0.1    1.0  1  HBB1_VAREX  
+    5.9e-61  196.1   0.4    6.5e-61  196.0   0.4    1.0  1  HBAD_CHLME  
+    9.8e-61  195.4   0.1    1.1e-60  195.3   0.1    1.0  1  HBAZ_HORSE  
+    2.2e-60  194.2   0.2    2.5e-60  194.1   0.2    1.0  1  HBA_COLLI   
+    1.5e-59  191.5   0.1    1.7e-59  191.4   0.1    1.0  1  HBAD_PASMO  
+    1.3e-57  185.2   0.2    1.6e-57  185.0   0.2    1.0  1  HBBL_RANCA  
+      3e-56  180.9   0.7    3.5e-56  180.6   0.7    1.0  1  HBB2_XENTR  
+    2.9e-55  177.6   0.4    3.2e-55  177.5   0.4    1.0  1  MYG_MUSAN   
+    7.5e-55  176.3   0.1    8.3e-55  176.2   0.1    1.0  1  HBA4_SALIR  
++   1.7e-38  123.2   0.0    1.8e-38  123.1   0.0    1.0  1  HBB2_TRICR  
 
 
 Domain annotation for each sequence (and alignments):
+>> MYG_ESCGI  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  219.1   2.1   4.9e-68   4.9e-68       2     154 .]       1     153 []       1     153 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 219.1 bits;  conditional E-value: 4.9e-68
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             vlsd+e+qlv ++w+kvead+a++Gq++L+rlf+ +Pet e+FdkF++lk+eae+k+s+++k+hg++vltalg ++kk+++++++lk+L+++Hatk+k+++++++++s+++++vl++++p++f++++qaa++k+lel+++++aakYkelgfqg
+               MYG_ESCGI   1 VLSDAEWQLVLNIWAKVEADVAGHGQDILIRLFKGHPETLEKFDKFKHLKTEAEMKASEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSRHPGDFGADAQAAMNKALELFRKDIAAKYKELGFQG 153
+                             69******************************************************************************************************************************************************8 PP
+
 >> HBB_MANSP  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  211.9   0.1   6.8e-66   6.8e-66       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  218.9   0.1   5.6e-68   5.6e-68       3     147 ..       3     145 ..       1     146 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 211.9 bits;  conditional E-value: 6.8e-66
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eek++v+++wgkv++d  e+G+eaL rl+vvyP+t+++Fd+F+dl+s+++v+g++kvkahgkkvl a+++++++ld+lkg++++LselH++kl+vdpenfkll++vlv+vla++f+keftp+vqaa++k+++ vanala+kY
-               HBB_MANSP   6 EEKTAVTTLWGKVNVD--EVGGEALGRLLVVYPWTQRFFDSFGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLNHLDNLKGTFAQLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
-                             59***********886..669************************************************************************************************************************9 PP
+  == domain 1  score: 218.9 bits;  conditional E-value: 5.6e-68
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             l+ eek++v+++wgkv++d  e+G+eaL rl+vvyP+t+++Fd+F+dl+s+++v+g++kvkahgkkvl a+++++++ld+lkg++++LselH++kl+vdpenfkll++vlv+vla++f+keftp+vqaa++k+++ vanala+kY
+               HBB_MANSP   3 LTPEEKTAVTTLWGKVNVD--EVGGEALGRLLVVYPWTQRFFDSFGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLNHLDNLKGTFAQLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
+                             7899************886..669************************************************************************************************************************* PP
+
+>> MYG_LYCPI  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  217.3   2.0   1.7e-67   1.7e-67       3     154 .]       2     153 .]       1     153 [] 1.00
+
+  Alignments for each domain:
+  == domain 1  score: 217.3 bits;  conditional E-value: 1.7e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             lsd+e+q v ++wgkve+d a++Gqe+L+rlf+++Pet ++FdkF++lk+e+e+kgs+++k+hg++vltalg ++kk+++++++lk+L+++Hatk+k+++++++++s+++++vl++k++++f+++++aa++k+lel++n++aakYkelgfqg
+               MYG_LYCPI   2 LSDGEWQIVLNIWGKVETDLAGHGQEVLIRLFKNHPETLDKFDKFKHLKTEDEMKGSEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPVKYLEFISDAIIQVLQNKHSGDFHADTEAAMKKALELFRNDIAAKYKELGFQG 153
+                             89*****************************************************************************************************************************************************8 PP
 
 >> HBB_URSMA  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  210.1   0.1   2.5e-65   2.5e-65       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  216.9   0.2   2.4e-67   2.4e-67       3     147 ..       3     145 ..       1     146 [] 0.98
+
+  Alignments for each domain:
+  == domain 1  score: 216.9 bits;  conditional E-value: 2.4e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             l+ eek+lv+ +wgkv++d  e+G+eaL rl+vvyP+t+++Fd+F+dl+s++++++++kvkahgkkvl+++++++k+ld+lkg+++kLselH++kl+vdpenfkll++vlv+vla++f+keftp+vqaa++k+++ vanala+kY
+               HBB_URSMA   3 LTGEEKSLVTGLWGKVNVD--EVGGEALGRLLVVYPWTQRFFDSFGDLSSADAIMNNPKVKAHGKKVLNSFSDGLKNLDNLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
+                             7899************886..669************************************************************************************************************************* PP
+
+>> MYG_PROGU  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  216.6   0.3     3e-67     3e-67       3     154 .]       2     153 .]       1     153 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 210.1 bits;  conditional E-value: 2.5e-65
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eek+lv+ +wgkv++d  e+G+eaL rl+vvyP+t+++Fd+F+dl+s++++++++kvkahgkkvl+++++++k+ld+lkg+++kLselH++kl+vdpenfkll++vlv+vla++f+keftp+vqaa++k+++ vanala+kY
-               HBB_URSMA   6 EEKSLVTGLWGKVNVD--EVGGEALGRLLVVYPWTQRFFDSFGDLSSADAIMNNPKVKAHGKKVLNSFSDGLKNLDNLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
-                             599**********886..669************************************************************************************************************************9 PP
-
->> HBB_COLLI  
+  == domain 1  score: 216.6 bits;  conditional E-value: 3e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             lsd+e+qlv +vwgkve+d +++Gqe+L+rlf+ +Pet e+FdkF++lk+e+e+++s+++k+hg++vltalg ++kk+++++++l++L+++Hatk+k+++++++++se++++vl++k+p++f++++q+a++k+lel++n++aakYkelgfqg
+               MYG_PROGU   2 LSDGEWQLVLNVWGKVEGDLSGHGQEVLIRLFKGHPETLEKFDKFKHLKAEDEMRASEELKKHGTTVLTALGGILKKKGQHAAELAPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDIAAKYKELGFQG 153
+                             89*****************************************************************************************************************************************************8 PP
+
+>> MYG_HORSE  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  207.7   0.0   1.4e-64   1.4e-64       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  216.2   1.1     4e-67     4e-67       3     154 .]       2     153 .]       1     153 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 207.7 bits;  conditional E-value: 1.4e-64
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eekql++s+wgkv++  a++GaeaL+rl++vyP+t+++F++F++l+s+++++g+++vkahgkkvlt++g+avk+ld++kg++++LselH++kl+vdpenf+ll+++lv++laa+f+k+ftpe+qaa++kl+++va+ala+kY
-               HBB_COLLI   6 EEKQLITSIWGKVNV--ADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAHGKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARKY 145
-                             69***********75..789*************************************************************************************************************************9 PP
+  == domain 1  score: 216.2 bits;  conditional E-value: 4e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             lsd+e+q+v +vwgkvead a++Gqe+L+rlf+ +Pet e+FdkF++lk+eae+k+s+++k+hg+ vltalg ++kk+++++++lk+L+++Hatk+k+++++++++s+++++vl++k+p++f++++q+a++k+lel++n++aakYkelgfqg
+               MYG_HORSE   2 LSDGEWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSKHPGNFGADAQGAMTKALELFRNDIAAKYKELGFQG 153
+                             89*****************************************************************************************************************************************************8 PP
 
 >> HBB_RABIT  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  207.6   0.3   1.5e-64   1.5e-64       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  216.0   0.7   4.4e-67   4.4e-67       3     147 ..       3     145 ..       1     146 [] 0.98
+
+  Alignments for each domain:
+  == domain 1  score: 216.0 bits;  conditional E-value: 4.4e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             ls+eek++v+++wgkv+++  e+G+eaL rl+vvyP+t+++F++F+dl+s+++v++++kvkahgkkvl+a++e++++ld+lkg+++kLselH++kl+vdpenf+ll++vlv+vl+++f+keftp+vqaa++k+++ vanala+kY
+               HBB_RABIT   3 LSSEEKSAVTALWGKVNVE--EVGGEALGRLLVVYPWTQRFFESFGDLSSANAVMNNPKVKAHGKKVLAAFSEGLSHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVIVLSHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
+                             89**************875..679************************************************************************************************************************* PP
+
+>> HBB_SPECI  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  215.0   0.8   9.4e-67   9.4e-67       3     147 ..       3     145 ..       1     146 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 207.6 bits;  conditional E-value: 1.5e-64
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eek++v+++wgkv+++  e+G+eaL rl+vvyP+t+++F++F+dl+s+++v++++kvkahgkkvl+a++e++++ld+lkg+++kLselH++kl+vdpenf+ll++vlv+vl+++f+keftp+vqaa++k+++ vanala+kY
-               HBB_RABIT   6 EEKSAVTALWGKVNVE--EVGGEALGRLLVVYPWTQRFFESFGDLSSANAVMNNPKVKAHGKKVLAAFSEGLSHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVIVLSHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
-                             599**********875..679************************************************************************************************************************9 PP
+  == domain 1  score: 215.0 bits;  conditional E-value: 9.4e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             lsd+ek++++++wgkv  +aae+G+eaL rl+vvyP+t+++Fd+F+dl+s+++v+g+akvkahgkkv++++++++k+ld+lkg++++LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k+++ vanala+kY
+               HBB_SPECI   3 LSDGEKNAISTAWGKV--HAAEVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALAHKY 145
+                             9***************..67889************************************************************************************************************************** PP
+
+>> MYG_SAISC  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  214.9   1.2   9.5e-67   9.5e-67       3     154 .]       2     153 .]       1     153 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 214.9 bits;  conditional E-value: 9.5e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             lsd+e+qlv ++wgkvead  ++Gqe+L+ lf+ +Pet e+FdkF++lkse+e+k+s+++k+hg++vltalg ++kk+++++++lk+L+++Hatk+k+++++++l+s+++v+vl++k+p++f++++q+a++k+lel++n++aakYkelgfqg
+               MYG_SAISC   2 LSDGEWQLVLNIWGKVEADIPSHGQEVLISLFKGHPETLEKFDKFKHLKSEDEMKASEELKKHGTTVLTALGGILKKKGQHEAELKPLAQSHATKHKIPVKYLELISDAIVHVLQKKHPGDFGADAQGAMKKALELFRNDMAAKYKELGFQG 153
+                             89*****************************************************************************************************************************************************8 PP
 
 >> HBB_SUNMU  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  206.7   0.0   2.8e-64   2.8e-64       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  214.8   0.1     1e-66     1e-66       3     147 ..       3     145 ..       1     146 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 206.7 bits;  conditional E-value: 2.8e-64
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eek+ v+ +wgkv++d  e+GaeaL rl+vvyP+t+++Fd+F+dl+s+++v+g++kvkahgkkvl++lge+v +ld+lkg+++kLselH++kl+vdpenf+ll++vlvvvla+kf+keftp vqaa++k+++ vanala+kY
-               HBB_SUNMU   6 EEKACVTGLWGKVNED--EVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNPKVKAHGKKVLHSLGEGVANLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVVVLASKFGKEFTPPVQAAFQKVVAGVANALAHKY 145
-                             599**********865..679************************************************************************************************************************9 PP
+  == domain 1  score: 214.8 bits;  conditional E-value: 1e-66
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             ls eek+ v+ +wgkv++d  e+G+eaL rl+vvyP+t+++Fd+F+dl+s+++v+g++kvkahgkkvl++lge+v +ld+lkg+++kLselH++kl+vdpenf+ll++vlvvvla+kf+keftp vqaa++k+++ vanala+kY
+               HBB_SUNMU   3 LSGEEKACVTGLWGKVNED--EVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNPKVKAHGKKVLHSLGEGVANLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVVVLASKFGKEFTPPVQAAFQKVVAGVANALAHKY 145
+                             899*************865..679************************************************************************************************************************* PP
+
+>> HBB_COLLI  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  214.4   0.0   1.3e-66   1.3e-66       4     147 ..       4     145 ..       1     146 [] 0.98
+
+  Alignments for each domain:
+  == domain 1  score: 214.4 bits;  conditional E-value: 1.3e-66
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   4 sdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             s+eekql++s+wgkv++  a++G+eaL+rl++vyP+t+++F++F++l+s+++++g+++vkahgkkvlt++g+avk+ld++kg++++LselH++kl+vdpenf+ll+++lv++laa+f+k+ftpe+qaa++kl+++va+ala+kY
+               HBB_COLLI   4 SAEEKQLITSIWGKVNV--ADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAHGKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARKY 145
+                             899************75..789************************************************************************************************************************** PP
 
 >> HBB_EQUHE  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  206.1   0.1   4.1e-64   4.1e-64       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  214.3   0.1   1.5e-66   1.5e-66       3     147 ..       3     145 ..       1     146 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 206.1 bits;  conditional E-value: 4.1e-64
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eek++v ++w+kv++  +e+G+eaL rl+vvyP+t+++Fd+F+dl+++a+v+g++kvkahgkkvl+++ge+v++ld+lkg++++LselH++kl+vdpenf+ll++vlvvvla++f+k+ftpe qa+++k+++ vanala+kY
-               HBB_EQUHE   6 EEKAAVLALWDKVNE--EEVGGEALGRLLVVYPWTQRFFDSFGDLSNPAAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAQLSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKY 145
-                             599**********75..5789************************************************************************************************************************9 PP
-
->> HBB_SPECI  
+  == domain 1  score: 214.3 bits;  conditional E-value: 1.5e-66
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             ls eek++v ++w+kv++  +e+G+eaL rl+vvyP+t+++Fd+F+dl+++a+v+g++kvkahgkkvl+++ge+v++ld+lkg++++LselH++kl+vdpenf+ll++vlvvvla++f+k+ftpe qa+++k+++ vanala+kY
+               HBB_EQUHE   3 LSGEEKAAVLALWDKVNE--EEVGGEALGRLLVVYPWTQRFFDSFGDLSNPAAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAQLSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKY 145
+                             899*************75..5789************************************************************************************************************************* PP
+
+>> MYG_MOUSE  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  205.7   0.4   5.7e-64   5.7e-64       2     142 .]       7     145 ..       6     145 .. 0.98
+   1 !  213.6   0.4   2.5e-66   2.5e-66       3     154 .]       2     153 .]       1     153 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 205.7 bits;  conditional E-value: 5.7e-64
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             ek++++++wgkv  +aae+GaeaL rl+vvyP+t+++Fd+F+dl+s+++v+g+akvkahgkkv++++++++k+ld+lkg++++LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k+++ vanala+kY
-               HBB_SPECI   7 EKNAISTAWGKV--HAAEVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALAHKY 145
-                             89**********..67889*************************************************************************************************************************9 PP
+  == domain 1  score: 213.6 bits;  conditional E-value: 2.5e-66
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             lsd+e+qlv +vwgkvead a++Gqe+L+ lf+++Pet ++FdkF++lkse+++kgs+++k+hg +vltalg+++kk++++++++++L+++Hatk+k+++++++++se+++ vl+++++++f++++q+a++k+lel++n++aakYkelgfqg
+               MYG_MOUSE   2 LSDGEWQLVLNVWGKVEADLAGHGQEVLIGLFKTHPETLDKFDKFKNLKSEEDMKGSEDLKKHGCTVLTALGTILKKKGQHAAEIQPLAQSHATKHKIPVKYLEFISEIIIEVLKKRHSGDFGADAQGAMSKALELFRNDIAAKYKELGFQG 153
+                             89*****************************************************************************************************************************************************8 PP
 
 >> HBB_TACAC  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  205.4   0.2   7.1e-64   7.1e-64       2     142 .]       7     145 ..       6     145 .. 0.98
+   1 !  212.9   0.3     4e-66     4e-66       3     147 ..       3     145 ..       1     146 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 205.4 bits;  conditional E-value: 7.1e-64
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             ek++v+++wg+v+++  e+G+eaL rl+vvyP+t+++F++F+dl+s+++v+g+akvkahg kvlt++g+a+k+ld+lkg+++kLselH++kl+vdpenf+ l++vlvvvla++f+keftpe+qaa++kl++ v++ala+kY
-               HBB_TACAC   7 EKTAVTNLWGHVNVN--ELGGEALGRLLVVYPWTQRFFESFGDLSSADAVMGNAKVKAHGAKVLTSFGDALKNLDNLKGTFAKLSELHCDKLHVDPENFNRLGNVLVVVLARHFSKEFTPEAQAAWQKLVSGVSHALAHKY 145
-                             89**********875..779************************************************************************************************************************9 PP
-
->> HBE_PONPY  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  205.2   0.1   7.9e-64   7.9e-64       1     142 []       6     145 ..       6     145 .. 0.98
-
-  Alignments for each domain:
-  == domain 1  score: 205.2 bits;  conditional E-value: 7.9e-64
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eek++v+s+w+k+++++a  G+eaL rl+vvyP+t+++Fd+F++l+s++++ g++kvkahgkkvlt++g+a+k++d+lk++++kLselH++kl+vdpenfkll++v+v++la++f+keftpevqaa++kl+++va ala+kY
-               HBE_PONPY   6 EEKAAVTSLWSKMNVEEA--GGEALGRLLVVYPWTQRFFDSFGNLSSPSAILGNPKVKAHGKKVLTSFGDAIKNMDNLKTTFAKLSELHCDKLHVDPENFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKY 145
-                             599**********88755..9************************************************************************************************************************9 PP
+  == domain 1  score: 212.9 bits;  conditional E-value: 4e-66
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             ls +ek++v+++wg+v+++  e+G+eaL rl+vvyP+t+++F++F+dl+s+++v+g+akvkahg kvlt++g+a+k+ld+lkg+++kLselH++kl+vdpenf+ l++vlvvvla++f+keftpe+qaa++kl++ v++ala+kY
+               HBB_TACAC   3 LSGSEKTAVTNLWGHVNVN--ELGGEALGRLLVVYPWTQRFFESFGDLSSADAVMGNAKVKAHGAKVLTSFGDALKNLDNLKGTFAKLSELHCDKLHVDPENFNRLGNVLVVVLARHFSKEFTPEAQAAWQKLVSGVSHALAHKY 145
+                             899*************875..779************************************************************************************************************************* PP
 
 >> HBB_SPETO  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  204.8   0.2   1.1e-63   1.1e-63       2     142 .]       7     145 ..       6     145 .. 0.98
+   1 !  212.8   0.5   4.4e-66   4.4e-66       3     147 ..       3     145 ..       1     146 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 204.8 bits;  conditional E-value: 1.1e-63
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             ek++++++wgkv+  aaeiGaeaL rl+vvyP+t+++Fd+F+dl+s+++v+g+akvkahgkkv++++++++k+ld+lkg++++LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k+++ vanal++kY
-               HBB_SPETO   7 EKNAISTAWGKVN--AAEIGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALSHKY 145
-                             89**********7..5789*************************************************************************************************************************9 PP
+  == domain 1  score: 212.8 bits;  conditional E-value: 4.4e-66
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             l+d+ek++++++wgkv+  aaeiG+eaL rl+vvyP+t+++Fd+F+dl+s+++v+g+akvkahgkkv++++++++k+ld+lkg++++LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k+++ vanal++kY
+               HBB_SPETO   3 LTDGEKNAISTAWGKVN--AAEIGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALSHKY 145
+                             899*************7..5789************************************************************************************************************************** PP
+
+>> HBE_PONPY  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  211.1   0.4   1.5e-65   1.5e-65       4     147 ..       4     145 ..       1     146 [] 0.97
+
+  Alignments for each domain:
+  == domain 1  score: 211.1 bits;  conditional E-value: 1.5e-65
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   4 sdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             ++eek++v+s+w+k+++++a  G+eaL rl+vvyP+t+++Fd+F++l+s++++ g++kvkahgkkvlt++g+a+k++d+lk++++kLselH++kl+vdpenfkll++v+v++la++f+keftpevqaa++kl+++va ala+kY
+               HBE_PONPY   4 TAEEKAAVTSLWSKMNVEEA--GGEALGRLLVVYPWTQRFFDSFGNLSSPSAILGNPKVKAHGKKVLTSFGDAIKNMDNLKTTFAKLSELHCDKLHVDPENFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKY 145
+                             689************98755..9************************************************************************************************************************* PP
 
 >> HBB_CALAR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  204.1   0.1   1.8e-63   1.8e-63       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  210.9   0.1   1.7e-65   1.7e-65       3     147 ..       3     145 ..       1     146 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 204.1 bits;  conditional E-value: 1.8e-63
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eek++v+++wgkv++d  e+G+eaL rl+vvyP+t+++F++F+dl+++++v++++kvkahgkkvl a+++++++ld+lkg++++LselH++kl+vdpenf+ll++vlv+vla++f+keftp vqaa++k+++ vanala+kY
-               HBB_CALAR   6 EEKSAVTALWGKVNVD--EVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMNNPKVKAHGKKVLGAFSDGLTHLDNLKGTFAHLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPVVQAAYQKVVAGVANALAHKY 145
-                             599**********886..669************************************************************************************************************************9 PP
+  == domain 1  score: 210.9 bits;  conditional E-value: 1.7e-65
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             l+ eek++v+++wgkv++d  e+G+eaL rl+vvyP+t+++F++F+dl+++++v++++kvkahgkkvl a+++++++ld+lkg++++LselH++kl+vdpenf+ll++vlv+vla++f+keftp vqaa++k+++ vanala+kY
+               HBB_CALAR   3 LTGEEKSAVTALWGKVNVD--EVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMNNPKVKAHGKKVLGAFSDGLTHLDNLKGTFAHLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPVVQAAYQKVVAGVANALAHKY 145
+                             7899************886..669************************************************************************************************************************* PP
 
 >> HBB_ORNAN  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  202.5   0.0   5.4e-63   5.4e-63       2     142 .]       7     145 ..       6     145 .. 0.98
+   1 !  210.4   0.0   2.4e-65   2.4e-65       3     147 ..       3     145 ..       1     146 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 202.5 bits;  conditional E-value: 5.4e-63
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             ek++v+++wgkv+ +  e+G+eaL rl+vvyP+t+++F+ F+dl+s+ +v+g++kvkahg kvlt++g+a+k+lddlkg+++kLselH++kl+vdpenf+ l++vl+vvla++f+k+f+pevqaa++kl++ va+al +kY
-               HBB_ORNAN   7 EKSAVTNLWGKVNIN--ELGGEALGRLLVVYPWTQRFFEAFGDLSSAGAVMGNPKVKAHGAKVLTSFGDALKNLDDLKGTFAKLSELHCDKLHVDPENFNRLGNVLIVVLARHFSKDFSPEVQAAWQKLVSGVAHALGHKY 145
-                             89**********875..779************************************************************************************************************************9 PP
+  == domain 1  score: 210.4 bits;  conditional E-value: 2.4e-65
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             ls +ek++v+++wgkv+ +  e+G+eaL rl+vvyP+t+++F+ F+dl+s+ +v+g++kvkahg kvlt++g+a+k+lddlkg+++kLselH++kl+vdpenf+ l++vl+vvla++f+k+f+pevqaa++kl++ va+al +kY
+               HBB_ORNAN   3 LSGGEKSAVTNLWGKVNIN--ELGGEALGRLLVVYPWTQRFFEAFGDLSSAGAVMGNPKVKAHGAKVLTSFGDALKNLDDLKGTFAKLSELHCDKLHVDPENFNRLGNVLIVVLARHFSKDFSPEVQAAWQKLVSGVAHALGHKY 145
+                             899*************875..779************************************************************************************************************************* PP
+
+>> HBA_MESAU  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  209.5   0.2   4.6e-65   4.6e-65       2     148 ..       1     141 []       1     141 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 209.5 bits;  conditional E-value: 4.6e-65
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls+++k++++++wgk++++a e+G+eaLer+f vyP+tk+yF++Fd +      +gsa+vk+hgkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+la+++p++ftp+v+a+ldk++++v+++l++kY+
+               HBA_MESAU   1 VLSAKDKTNISEAWGKIGGHAGEYGAEALERMFFVYPTTKTYFPHFDVS------HGSAQVKGHGKKVADALTNAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLANHHPADFTPAVHASLDKFFASVSTVLTSKYR 141
+                             699********************************************96......9******************************************************************************************7 PP
 
 >> HBB_LARRI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  201.7   0.0   9.5e-63   9.5e-63       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  208.4   0.0   9.6e-65   9.6e-65       4     147 ..       4     145 ..       1     146 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 201.7 bits;  conditional E-value: 9.5e-63
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eekql++ +wgkv++  a++GaeaL+rl++vyP+t+++F +F++l+s+++++g++ v+ahgkkvlt++geavk+ld++k+++++LselH++kl+vdpenf+ll+++l++vlaa+f+k+ftp+ qaa++kl+++va+ala+kY
-               HBB_LARRI   6 EEKQLITGLWGKVNV--ADCGAEALARLLIVYPWTQRFFASFGNLSSPTAINGNPMVRAHGKKVLTSFGEAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFAKDFTPDSQAAWQKLVRVVAHALARKY 145
-                             69***********75..789*************************************************************************************************************************9 PP
+  == domain 1  score: 208.4 bits;  conditional E-value: 9.6e-65
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   4 sdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             s+eekql++ +wgkv++  a++G+eaL+rl++vyP+t+++F +F++l+s+++++g++ v+ahgkkvlt++geavk+ld++k+++++LselH++kl+vdpenf+ll+++l++vlaa+f+k+ftp+ qaa++kl+++va+ala+kY
+               HBB_LARRI   4 SAEEKQLITGLWGKVNV--ADCGAEALARLLIVYPWTQRFFASFGNLSSPTAINGNPMVRAHGKKVLTSFGEAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFAKDFTPDSQAAWQKLVRVVAHALARKY 145
+                             899************75..789************************************************************************************************************************** PP
 
 >> HBB_TRIIN  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  201.2   0.1   1.3e-62   1.3e-62       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  208.1   0.1   1.2e-64   1.2e-64       3     147 ..       3     145 ..       1     146 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 201.2 bits;  conditional E-value: 1.3e-62
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eek+lv  +w+kv++  +e+G+eaL rl+vvyP+t+++F++F+dl+s++++++++kvkahg+kv+t++g+++k+l+dlkga+++LselH++kl+vdpenf+ll++vlv+vla++f+kef+pe+qaa++k+++ vanala+kY
-               HBB_TRIIN   6 EEKALVIGLWAKVNV--KEYGGEALGRLLVVYPWTQRFFEHFGDLSSASAIMNNPKVKAHGEKVFTSFGDGLKHLEDLKGAFAELSELHCDKLHVDPENFRLLGNVLVCVLARHFGKEFSPEAQAAYQKVVAGVANALAHKY 145
-                             599**********76..689*************************************************************************************************************************9 PP
-
->> HBA_MESAU  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  199.7   0.2   3.9e-62   3.9e-62       2     142 .]       6     140 ..       5     140 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 199.7 bits;  conditional E-value: 3.9e-62
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k++++++wgk++++a e+GaeaLer+f vyP+tk+yF++Fd +      +gsa+vk+hgkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+la+++p++ftp+v+a+ldk++++v+++l++kY
-               HBA_MESAU   6 DKTNISEAWGKIGGHAGEYGAEALERMFFVYPTTKTYFPHFDVS------HGSAQVKGHGKKVADALTNAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLANHHPADFTPAVHASLDKFFASVSTVLTSKY 140
-                             89****************************************96......9*****************************************************************************************9 PP
+  == domain 1  score: 208.1 bits;  conditional E-value: 1.2e-64
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             l+ eek+lv  +w+kv++  +e+G+eaL rl+vvyP+t+++F++F+dl+s++++++++kvkahg+kv+t++g+++k+l+dlkga+++LselH++kl+vdpenf+ll++vlv+vla++f+kef+pe+qaa++k+++ vanala+kY
+               HBB_TRIIN   3 LTPEEKALVIGLWAKVNV--KEYGGEALGRLLVVYPWTQRFFEHFGDLSSASAIMNNPKVKAHGEKVFTSFGDGLKHLEDLKGAFAELSELHCDKLHVDPENFRLLGNVLVCVLARHFGKEFSPEAQAAYQKVVAGVANALAHKY 145
+                             7899************76..689************************************************************************************************************************** PP
 
 >> HBA_PONPY  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  197.9   0.8   1.4e-61   1.4e-61       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  207.4   0.5   1.9e-64   1.9e-64       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 197.9 bits;  conditional E-value: 1.4e-61
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k++vk++wgkv+a+a ++GaeaLer+f ++P+tk+yF++Fd +      +gsa+vk+hgkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+laa++p+eftp+v+a+ldk+l++v+++l++kY
-               HBA_PONPY   6 DKTNVKTAWGKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKDHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
-                             9*****************************************96......9*****************************************************************************************9 PP
-
->> MYG_ESCGI  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  197.0   2.3   2.8e-61   2.8e-61       2     142 .]       6     146 ..       5     146 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 197.0 bits;  conditional E-value: 2.8e-61
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             e+qlv ++w+kvead+a++G+++L+rlf+ +Pet e+FdkF++lk+eae+k+s+++k+hg++vltalg ++kk+++++++lk+L+++Hatk+k+++++++++s+++++vl++++p++f++++qaa++k+lel+++++aakY
-               MYG_ESCGI   6 EWQLVLNIWAKVEADVAGHGQDILIRLFKGHPETLEKFDKFKHLKTEAEMKASEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSRHPGDFGADAQAAMNKALELFRKDIAAKY 146
-                             9*******************************************************************************************************************************************9 PP
+  == domain 1  score: 207.4 bits;  conditional E-value: 1.9e-64
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls ++k++vk++wgkv+a+a ++G+eaLer+f ++P+tk+yF++Fd +      +gsa+vk+hgkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+laa++p+eftp+v+a+ldk+l++v+++l++kY+
+               HBA_PONPY   1 VLSPADKTNVKTAWGKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKDHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR 141
+                             699********************************************96......9******************************************************************************************7 PP
 
 >> HBA_MACFA  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  196.5   0.3   3.8e-61   3.8e-61       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  206.0   0.2   5.5e-64   5.5e-64       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 196.5 bits;  conditional E-value: 3.8e-61
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k++vk++wgkv+++a e+GaeaLer+f ++P+tk+yF++Fd +      +gsa+vk+hgkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+laa++p+eftp+v+a+ldk+l++v+++l++kY
-               HBA_MACFA   6 DKTNVKAAWGKVGGHAGEYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
-                             9*****************************************96......9*****************************************************************************************9 PP
+  == domain 1  score: 206.0 bits;  conditional E-value: 5.5e-64
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls ++k++vk++wgkv+++a e+G+eaLer+f ++P+tk+yF++Fd +      +gsa+vk+hgkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+laa++p+eftp+v+a+ldk+l++v+++l++kY+
+               HBA_MACFA   1 VLSPADKTNVKAAWGKVGGHAGEYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR 141
+                             699********************************************96......9******************************************************************************************7 PP
 
 >> HBA_MACSI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  196.2   0.3   4.7e-61   4.7e-61       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  205.7   0.2   6.8e-64   6.8e-64       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 196.2 bits;  conditional E-value: 4.7e-61
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k++vk++wgkv+++a e+GaeaLer+f ++P+tk+yF++Fd +      +gsa+vk+hgkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+laa++p+eftp+v+a+ldk+l++v+++l++kY
-               HBA_MACSI   6 DKTNVKDAWGKVGGHAGEYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
-                             9*****************************************96......9*****************************************************************************************9 PP
-
->> MYG_LYCPI  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  195.8   2.5   6.2e-61   6.2e-61       2     142 .]       6     146 ..       5     146 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 195.8 bits;  conditional E-value: 6.2e-61
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             e+q v ++wgkve+d a++G+e+L+rlf+++Pet ++FdkF++lk+e+e+kgs+++k+hg++vltalg ++kk+++++++lk+L+++Hatk+k+++++++++s+++++vl++k++++f+++++aa++k+lel++n++aakY
-               MYG_LYCPI   6 EWQIVLNIWGKVETDLAGHGQEVLIRLFKNHPETLDKFDKFKHLKTEDEMKGSEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPVKYLEFISDAIIQVLQNKHSGDFHADTEAAMKKALELFRNDIAAKY 146
-                             9*******************************************************************************************************************************************9 PP
+  == domain 1  score: 205.7 bits;  conditional E-value: 6.8e-64
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls ++k++vk++wgkv+++a e+G+eaLer+f ++P+tk+yF++Fd +      +gsa+vk+hgkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+laa++p+eftp+v+a+ldk+l++v+++l++kY+
+               HBA_MACSI   1 VLSPADKTNVKDAWGKVGGHAGEYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR 141
+                             699********************************************96......9******************************************************************************************7 PP
 
 >> HBA_AILME  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  195.7   0.1   6.8e-61   6.8e-61       2     142 .]       6     140 ..       5     140 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 195.7 bits;  conditional E-value: 6.8e-61
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k++vk+ w+k++++a e+G+eaLer f ++P+tk+yF++Fd +       gsa+vkahgkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+la+++p+eftp+v+a+ldk++++v+++l++kY
-               HBA_AILME   6 DKTNVKATWDKIGGHAGEYGGEALERTFASFPTTKTYFPHFDLS------PGSAQVKAHGKKVADALTTAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLASHHPAEFTPAVHASLDKFFSAVSTVLTSKY 140
-                             9*****************************************96......9*****************************************************************************************9 PP
-
->> MYG_PROGU  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  195.5   0.3     8e-61     8e-61       2     142 .]       6     146 ..       5     146 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 195.5 bits;  conditional E-value: 8e-61
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             e+qlv +vwgkve+d +++G+e+L+rlf+ +Pet e+FdkF++lk+e+e+++s+++k+hg++vltalg ++kk+++++++l++L+++Hatk+k+++++++++se++++vl++k+p++f++++q+a++k+lel++n++aakY
-               MYG_PROGU   6 EWQLVLNVWGKVEGDLSGHGQEVLIRLFKGHPETLEKFDKFKHLKAEDEMRASEELKKHGTTVLTALGGILKKKGQHAAELAPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDIAAKY 146
-                             9*******************************************************************************************************************************************9 PP
-
->> HBB_TUPGL  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  195.1   0.0     1e-60     1e-60       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  205.1   0.1     1e-63     1e-63       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 195.1 bits;  conditional E-value: 1e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eek++v+ +wgkv+   +++G++ L  l++vyP+t+++Fd+F+dl+s+++v++++kvkahgkkvlt++++++++ld+lkg+++kLselH++kl+vdpenf+ll++vlv vla++f+ eftp+vqaa++k+++ vanala+kY
-               HBB_TUPGL   6 EEKAAVTGLWGKVDL--EKVGGQSLGSLLIVYPWTQRFFDSFGDLSSPSAVMSNPKVKAHGKKVLTSFSDGLNHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVRVLACNFGPEFTPQVQAAFQKVVAGVANALAHKY 145
-                             599**********76..567999**********************************************************************************************************************9 PP
-
->> MYG_HORSE  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  194.7   1.5   1.3e-60   1.3e-60       2     142 .]       6     146 ..       5     146 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 194.7 bits;  conditional E-value: 1.3e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             e+q+v +vwgkvead a++G+e+L+rlf+ +Pet e+FdkF++lk+eae+k+s+++k+hg+ vltalg ++kk+++++++lk+L+++Hatk+k+++++++++s+++++vl++k+p++f++++q+a++k+lel++n++aakY
-               MYG_HORSE   6 EWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSKHPGNFGADAQGAMTKALELFRNDIAAKY 146
-                             9*******************************************************************************************************************************************9 PP
-
->> HBA2_GALCR  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  194.1   0.6   2.2e-60   2.2e-60       2     142 .]       6     140 ..       5     140 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 194.1 bits;  conditional E-value: 2.2e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k++vk++w+kv+a+a ++GaeaLer+f ++P+tk+yF++Fd +      +gs++vk+hgkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfkll ++l+v+la+++p+eftp+v+a+ldk++++v+++l++kY
-              HBA2_GALCR   6 DKSNVKAAWEKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLS------HGSTQVKGHGKKVADALTNAVLHVDDMPSALSALSDLHAHKLRVDPVNFKLLRHCLLVTLACHHPAEFTPAVHASLDKFMASVSTVLTSKY 140
-                             89****************************************96......9*****************************************************************************************9 PP
+  == domain 1  score: 205.1 bits;  conditional E-value: 1e-63
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls ++k++vk+ w+k++++a e+G+eaLer f ++P+tk+yF++Fd +       gsa+vkahgkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+la+++p+eftp+v+a+ldk++++v+++l++kY+
+               HBA_AILME   1 VLSPADKTNVKATWDKIGGHAGEYGGEALERTFASFPTTKTYFPHFDLS------PGSAQVKAHGKKVADALTTAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLASHHPAEFTPAVHASLDKFFSAVSTVLTSKYR 141
+                             699********************************************96......9******************************************************************************************7 PP
 
 >> HBA_FRAPO  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  193.7   0.3   2.8e-60   2.8e-60       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  203.4   0.3   3.4e-63   3.4e-63       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 193.7 bits;  conditional E-value: 2.8e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k++vk ++gk++++a+++GaeaLer+f++yP+tk+yF++Fd +      +gsa+vk+hgkkv++al ea +++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l++v n+l+akY
-               HBA_FRAPO   6 DKNNVKGIFGKISSHAEDYGAEALERMFITYPSTKTYFPHFDLS------HGSAQVKGHGKKVVAALIEAANHIDDIAGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGNVLTAKY 140
-                             9*****************************************96......9*****************************************************************************************9 PP
+  == domain 1  score: 203.4 bits;  conditional E-value: 3.4e-63
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls+++k++vk ++gk++++a+++G+eaLer+f++yP+tk+yF++Fd +      +gsa+vk+hgkkv++al ea +++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l++v n+l+akY+
+               HBA_FRAPO   1 VLSAADKNNVKGIFGKISSHAEDYGAEALERMFITYPSTKTYFPHFDLS------HGSAQVKGHGKKVVAALIEAANHIDDIAGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGNVLTAKYR 141
+                             699********************************************96......9******************************************************************************************7 PP
 
 >> HBA_PHACO  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  193.7   0.4   2.9e-60   2.9e-60       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  203.4   0.3   3.5e-63   3.5e-63       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 193.7 bits;  conditional E-value: 2.9e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k++vk +++k+ ++a+e+GaeaLer+f++yP+tk+yF++Fd +      +gsa++k+hgkkv++al eav+++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l++v ++l+akY
-               HBA_PHACO   6 DKNNVKGIFTKIAGHAEEYGAEALERMFITYPSTKTYFPHFDLS------HGSAQIKGHGKKVVAALIEAVNHIDDITGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGTVLTAKY 140
-                             9*****************************************96......9*****************************************************************************************9 PP
-
->> MYG_SAISC  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  193.6   1.5     3e-60     3e-60       2     142 .]       6     146 ..       5     146 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 193.6 bits;  conditional E-value: 3e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             e+qlv ++wgkvead  ++G+e+L+ lf+ +Pet e+FdkF++lkse+e+k+s+++k+hg++vltalg ++kk+++++++lk+L+++Hatk+k+++++++l+s+++v+vl++k+p++f++++q+a++k+lel++n++aakY
-               MYG_SAISC   6 EWQLVLNIWGKVEADIPSHGQEVLISLFKGHPETLEKFDKFKHLKSEDEMKASEELKKHGTTVLTALGGILKKKGQHEAELKPLAQSHATKHKIPVKYLELISDAIVHVLQKKHPGDFGADAQGAMKKALELFRNDMAAKY 146
-                             9*******************************************************************************************************************************************9 PP
+  == domain 1  score: 203.4 bits;  conditional E-value: 3.5e-63
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls+++k++vk +++k+ ++a+e+G+eaLer+f++yP+tk+yF++Fd +      +gsa++k+hgkkv++al eav+++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l++v ++l+akY+
+               HBA_PHACO   1 VLSAADKNNVKGIFTKIAGHAEEYGAEALERMFITYPSTKTYFPHFDLS------HGSAQIKGHGKKVVAALIEAVNHIDDITGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGTVLTAKYR 141
+                             699********************************************96......9******************************************************************************************7 PP
 
 >> HBA2_BOSMU  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  193.6   0.2   3.1e-60   3.1e-60       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  203.2   0.3   3.8e-63   3.8e-63       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 193.6 bits;  conditional E-value: 3.1e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k +vk++wgkv+++aae+GaeaLer+f ++P+tk+yF++Fd +      +gsa+vk+hg kv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls+ l+v+la+++p++ftp+v+a+ldk+l+ v+++l++kY
-              HBA2_BOSMU   6 DKGNVKAAWGKVGGHAAEYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKGHGAKVAAALTKAVGHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVTLASHLPSDFTPAVHASLDKFLANVSTVLTSKY 140
-                             899***************************************96......9*****************************************************************************************9 PP
-
->> HBB1_VAREX  
+  == domain 1  score: 203.2 bits;  conditional E-value: 3.8e-63
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls+++k +vk++wgkv+++aae+G+eaLer+f ++P+tk+yF++Fd +      +gsa+vk+hg kv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls+ l+v+la+++p++ftp+v+a+ldk+l+ v+++l++kY+
+              HBA2_BOSMU   1 VLSAADKGNVKAAWGKVGGHAAEYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKGHGAKVAAALTKAVGHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVTLASHLPSDFTPAVHASLDKFLANVSTVLTSKYR 141
+                             699********************************************96......9******************************************************************************************7 PP
+
+>> HBA2_GALCR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  193.0   0.0   4.5e-60   4.5e-60       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  203.1   0.4   4.1e-63   4.1e-63       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 193.0 bits;  conditional E-value: 4.5e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eekql+ s+wgk+++    iG+e+L+ l+v yP+t+++F++F++l+s+++++g+++vkahgkkvlt++g+a+k+ld++k++++kLselH++kl+vdp+nfkll++vlv+vla +++keftp+ +aa++kl+++v+++la++Y
-              HBB1_VAREX   6 EEKQLICSLWGKIDVG--LIGGETLAGLLVIYPWTQRQFSHFGNLSSPTAIAGNPRVKAHGKKVLTSFGDAIKNLDNIKDTFAKLSELHCDKLHVDPTNFKLLGNVLVIVLADHHGKEFTPAHHAAYQKLVNVVSHSLARRY 145
-                             69***********765..569***********************************************************************************************************************99 PP
-
->> MYG_MOUSE  
+  == domain 1  score: 203.1 bits;  conditional E-value: 4.1e-63
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls  +k++vk++w+kv+a+a ++G+eaLer+f ++P+tk+yF++Fd +      +gs++vk+hgkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfkll ++l+v+la+++p+eftp+v+a+ldk++++v+++l++kY+
+              HBA2_GALCR   1 VLSPTDKSNVKAAWEKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLS------HGSTQVKGHGKKVADALTNAVLHVDDMPSALSALSDLHAHKLRVDPVNFKLLRHCLLVTLACHHPAEFTPAVHASLDKFMASVSTVLTSKYR 141
+                             6999*******************************************96......9******************************************************************************************7 PP
+
+>> HBB_TUPGL  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  192.5   0.5   6.6e-60   6.6e-60       2     142 .]       6     146 ..       5     146 .. 0.99
+   1 !  203.1   0.0   4.1e-63   4.1e-63       3     147 ..       3     145 ..       1     146 [] 0.97
 
   Alignments for each domain:
-  == domain 1  score: 192.5 bits;  conditional E-value: 6.6e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             e+qlv +vwgkvead a++G+e+L+ lf+++Pet ++FdkF++lkse+++kgs+++k+hg +vltalg+++kk++++++++++L+++Hatk+k+++++++++se+++ vl+++++++f++++q+a++k+lel++n++aakY
-               MYG_MOUSE   6 EWQLVLNVWGKVEADLAGHGQEVLIGLFKTHPETLDKFDKFKNLKSEEDMKGSEDLKKHGCTVLTALGTILKKKGQHAAEIQPLAQSHATKHKIPVKYLEFISEIIIEVLKKRHSGDFGADAQGAMSKALELFRNDIAAKY 146
-                             9*******************************************************************************************************************************************9 PP
+  == domain 1  score: 203.1 bits;  conditional E-value: 4.1e-63
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             ls eek++v+ +wgkv+   +++G++ L  l++vyP+t+++Fd+F+dl+s+++v++++kvkahgkkvlt++++++++ld+lkg+++kLselH++kl+vdpenf+ll++vlv vla++f+ eftp+vqaa++k+++ vanala+kY
+               HBB_TUPGL   3 LSGEEKAAVTGLWGKVDL--EKVGGQSLGSLLIVYPWTQRFFDSFGDLSSPSAVMSNPKVKAHGKKVLTSFSDGLNHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVRVLACNFGPEFTPQVQAAFQKVVAGVANALAHKY 145
+                             899*************75..567999*********************************************************************************************************************** PP
 
 >> HBA_ANSSE  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  191.9   0.4     1e-59     1e-59       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  201.6   0.4   1.2e-62   1.2e-62       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 191.9 bits;  conditional E-value: 1e-59
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k +vk+v+gk++++a+e+Gae+L+r+f+++P+tk+yF++Fd +       gsa++kahgkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfk+l+++++vvla ++p+ +tpev+a++dk+l++va++l+akY
-               HBA_ANSSE   6 DKGNVKTVFGKIGGHAEEYGAETLQRMFQTFPQTKTYFPHFDLQ------PGSAQIKAHGKKVAAALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKFLGHCFLVVLAIHHPSLLTPEVHASMDKFLCAVATVLTAKY 140
-                             899***************************************96......9*****************************************************************************************9 PP
+  == domain 1  score: 201.6 bits;  conditional E-value: 1.2e-62
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls+++k +vk+v+gk++++a+e+G+e+L+r+f+++P+tk+yF++Fd +       gsa++kahgkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfk+l+++++vvla ++p+ +tpev+a++dk+l++va++l+akY+
+               HBA_ANSSE   1 VLSAADKGNVKTVFGKIGGHAEEYGAETLQRMFQTFPQTKTYFPHFDLQ------PGSAQIKAHGKKVAAALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKFLGHCFLVVLAIHHPSLLTPEVHASMDKFLCAVATVLTAKYR 141
+                             699********************************************96......9******************************************************************************************7 PP
 
 >> HBA_PAGLA  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  191.7   0.4   1.1e-59   1.1e-59       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  201.6   0.3   1.2e-62   1.2e-62       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 191.7 bits;  conditional E-value: 1.1e-59
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k+++k+ w+k++++a e+GaeaLer f+++P+tk+yF++Fd +      +gsa+vkahgkkv++al+ av +l+dl +al++Ls+lHa+kl+vdp+nfklls++l+v+la+++p+eftp+v++aldk++++v+++l++kY
-               HBA_PAGLA   6 DKNNIKATWDKIGSHAGEYGAEALERTFISFPTTKTYFPHFDLS------HGSAQVKAHGKKVADALTLAVGHLEDLPNALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPAEFTPAVHSALDKFFSAVSTVLTSKY 140
-                             9*****************************************96......9*****************************************************************************************9 PP
+  == domain 1  score: 201.6 bits;  conditional E-value: 1.2e-62
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls+++k+++k+ w+k++++a e+G+eaLer f+++P+tk+yF++Fd +      +gsa+vkahgkkv++al+ av +l+dl +al++Ls+lHa+kl+vdp+nfklls++l+v+la+++p+eftp+v++aldk++++v+++l++kY+
+               HBA_PAGLA   1 VLSSADKNNIKATWDKIGSHAGEYGAEALERTFISFPTTKTYFPHFDLS------HGSAQVKAHGKKVADALTLAVGHLEDLPNALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPAEFTPAVHSALDKFFSAVSTVLTSKYR 141
+                             69*********************************************96......9******************************************************************************************7 PP
 
 >> HBA_ERIEU  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  191.4   0.1   1.4e-59   1.4e-59       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  200.8   0.1   2.2e-62   2.2e-62       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 191.4 bits;  conditional E-value: 1.4e-59
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k++vk+ wgk++++  e+G+eaL r+f+ +P+tk+yF++Fd         gsa+vk+hgkkv++al++av++ldd+ gal++Ls+lHa+kl+vdp+nfklls++l+v+la ++p++ftp+v+a+ldk+l++va++l++kY
-               HBA_ERIEU   6 DKANVKTFWGKLGGHGGEYGGEALDRMFQAHPTTKTYFPHFDLN------PGSAQVKGHGKKVADALTTAVNNLDDVPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLALHHPADFTPAVHASLDKFLATVATVLTSKY 140
-                             89****************************************96......9*****************************************************************************************9 PP
+  == domain 1  score: 200.8 bits;  conditional E-value: 2.2e-62
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls+ +k++vk+ wgk++++  e+G+eaL r+f+ +P+tk+yF++Fd         gsa+vk+hgkkv++al++av++ldd+ gal++Ls+lHa+kl+vdp+nfklls++l+v+la ++p++ftp+v+a+ldk+l++va++l++kY+
+               HBA_ERIEU   1 VLSATDKANVKTFWGKLGGHGGEYGGEALDRMFQAHPTTKTYFPHFDLN------PGSAQVKGHGKKVADALTTAVNNLDDVPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLALHHPADFTPAVHASLDKFLATVATVLTSKYR 141
+                             699********************************************96......9******************************************************************************************7 PP
 
 >> HBA_PROLO  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  191.4   0.0   1.5e-59   1.5e-59       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  200.7   0.0   2.3e-62   2.3e-62       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 191.4 bits;  conditional E-value: 1.5e-59
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k+++k+ w+k++++a e+G+eaLer f ++P+tk+yF++Fd +       gsa+vkahgkkv++al+ av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+la+++p+eftp+v+a+ldk++++v+++l++kY
-               HBA_PROLO   6 DKANIKATWDKIGGHAGEYGGEALERTFASFPTTKTYFPHFDLS------PGSAQVKAHGKKVADALTLAVGHLDDLPGALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPAEFTPAVHASLDKFFTSVSTVLTSKY 140
-                             89****************************************96......9*****************************************************************************************9 PP
+  == domain 1  score: 200.7 bits;  conditional E-value: 2.3e-62
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls ++k+++k+ w+k++++a e+G+eaLer f ++P+tk+yF++Fd +       gsa+vkahgkkv++al+ av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+la+++p+eftp+v+a+ldk++++v+++l++kY+
+               HBA_PROLO   1 VLSPADKANIKATWDKIGGHAGEYGGEALERTFASFPTTKTYFPHFDLS------PGSAQVKAHGKKVADALTLAVGHLDDLPGALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPAEFTPAVHASLDKFFTSVSTVLTSKYR 141
+                             699********************************************96......9******************************************************************************************7 PP
 
 >> HBA_TRIOC  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  190.0   0.4   3.9e-59   3.9e-59       1     142 []       5     140 ..       5     140 .. 0.99
+   1 !  199.7   0.4   4.6e-62   4.6e-62       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 190.0 bits;  conditional E-value: 3.9e-59
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             ++k++vk+v++k++++a+++Gae+Ler+f++yP tk+yF++Fd +      +gsa++kahgkkv+ al eav+++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+ +tpev+a+ldk+l++v n+l+akY
-               HBA_TRIOC   5 NDKTNVKTVFTKITGHAEDYGAETLERMFITYPPTKTYFPHFDLH------HGSAQIKAHGKKVVGALIEAVNHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGQCFLVVVAIHHPSVLTPEVHASLDKFLCAVGNVLSAKY 140
-                             59*****************************************95......9*****************************************************************************************9 PP
+  == domain 1  score: 199.7 bits;  conditional E-value: 4.6e-62
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls+++k++vk+v++k++++a+++G+e+Ler+f++yP tk+yF++Fd +      +gsa++kahgkkv+ al eav+++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+ +tpev+a+ldk+l++v n+l+akY+
+               HBA_TRIOC   1 VLSANDKTNVKTVFTKITGHAEDYGAETLERMFITYPPTKTYFPHFDLH------HGSAQIKAHGKKVVGALIEAVNHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGQCFLVVVAIHHPSVLTPEVHASLDKFLCAVGNVLSAKYR 141
+                             69*********************************************95......9******************************************************************************************7 PP
+
+>> HBB1_VAREX  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  198.5   0.1   1.1e-61   1.1e-61       4     147 ..       4     145 ..       2     146 .] 0.97
+
+  Alignments for each domain:
+  == domain 1  score: 198.5 bits;  conditional E-value: 1.1e-61
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   4 sdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             ++eekql+ s+wgk+++    iG+e+L+ l+v yP+t+++F++F++l+s+++++g+++vkahgkkvlt++g+a+k+ld++k++++kLselH++kl+vdp+nfkll++vlv+vla +++keftp+ +aa++kl+++v+++la++Y
+              HBB1_VAREX   4 TAEEKQLICSLWGKIDVG--LIGGETLAGLLVIYPWTQRQFSHFGNLSSPTAIAGNPRVKAHGKKVLTSFGDAIKNLDNIKDTFAKLSELHCDKLHVDPTNFKLLGNVLVIVLADHHGKEFTPAHHAAYQKLVNVVSHSLARRY 145
+                             579************765..569************************************************************************************************************************* PP
 
 >> HBAD_CHLME  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  188.2   0.5   1.4e-58   1.4e-58       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  196.0   0.4   6.5e-61   6.5e-61       3     148 ..       2     141 .]       1     141 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 188.2 bits;  conditional E-value: 1.4e-58
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k+l++++w+kv ++++e+G+eaL+r+f +yP+tk+yF++Fd +       gs++v++hgkkv++alg+avk+ld+l++al++Ls+lHa++l+vdp nfkll++++ vvla++++k+++pe++aa+dk+l++va +la+kY
-              HBAD_CHLME   6 DKKLLTQLWEKVAGHQEEFGSEALQRMFLTYPQTKTYFPHFDLH------PGSEQVRGHGKKVAAALGNAVKSLDNLSQALSELSNLHAYNLRVDPANFKLLAQCFQVVLATHLGKDYSPEMHAAFDKFLSAVAAVLAEKY 140
-                             89****************************************95......9*****************************************************************************************9 PP
+  == domain 1  score: 196.0 bits;  conditional E-value: 6.5e-61
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             l++++k+l++++w+kv ++++e+G+eaL+r+f +yP+tk+yF++Fd +       gs++v++hgkkv++alg+avk+ld+l++al++Ls+lHa++l+vdp nfkll++++ vvla++++k+++pe++aa+dk+l++va +la+kY+
+              HBAD_CHLME   2 LTADDKKLLTQLWEKVAGHQEEFGSEALQRMFLTYPQTKTYFPHFDLH------PGSEQVRGHGKKVAAALGNAVKSLDNLSQALSELSNLHAYNLRVDPANFKLLAQCFQVVLATHLGKDYSPEMHAAFDKFLSAVAAVLAEKYR 141
+                             7899******************************************95......9******************************************************************************************7 PP
 
 >> HBAZ_HORSE  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  187.4   0.0   2.5e-58   2.5e-58       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  195.3   0.1   1.1e-60   1.1e-60       3     148 ..       2     141 .]       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 187.4 bits;  conditional E-value: 2.5e-58
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             e+++v s+wgk++++a+++G+eaL+rlf +yP+tk+yF++Fd +      +gs++++ahg+kv++a+g+avk++d+++gal+kLselHa+ l+vdp+nfk+ls++l+v+la+++p++ft++++aa+dk+l++v+++l++kY
-              HBAZ_HORSE   6 ERTMVVSIWGKISMQADAVGTEALQRLFSSYPQTKTYFPHFDLH------EGSPQLRAHGSKVAAAVGDAVKSIDNVAGALAKLSELHAYILRVDPVNFKFLSHCLLVTLASRLPADFTADAHAAWDKFLSIVSSVLTEKY 140
-                             899***************************************95......9*****************************************************************************************9 PP
+  == domain 1  score: 195.3 bits;  conditional E-value: 1.1e-60
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             l+++e+++v s+wgk++++a+++G+eaL+rlf +yP+tk+yF++Fd +      +gs++++ahg+kv++a+g+avk++d+++gal+kLselHa+ l+vdp+nfk+ls++l+v+la+++p++ft++++aa+dk+l++v+++l++kY+
+              HBAZ_HORSE   2 LTKAERTMVVSIWGKISMQADAVGTEALQRLFSSYPQTKTYFPHFDLH------EGSPQLRAHGSKVAAAVGDAVKSIDNVAGALAKLSELHAYILRVDPVNFKFLSHCLLVTLASRLPADFTADAHAAWDKFLSIVSSVLTEKYR 141
+                             7899******************************************95......9******************************************************************************************7 PP
 
 >> HBA_COLLI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  184.4   0.2     2e-57     2e-57       1     142 []       5     140 ..       5     140 .. 0.99
+   1 !  194.1   0.2   2.5e-60   2.5e-60       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 184.4 bits;  conditional E-value: 2e-57
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             ++k++vk+v++k++++a ++G+eaLerlf++yP+tk+yF++Fd +      +gsa++k+hgkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a +fp+ +tpev+a+ldk++ +v ++l+akY
-               HBA_COLLI   5 NDKSNVKAVFAKIGGQAGDLGGEALERLFITYPQTKTYFPHFDLS------HGSAQIKGHGKKVAEALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAKY 140
-                             599****************************************96......9*****************************************************************************************9 PP
+  == domain 1  score: 194.1 bits;  conditional E-value: 2.5e-60
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   2 vlsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vls+++k++vk+v++k++++a ++G+eaLerlf++yP+tk+yF++Fd +      +gsa++k+hgkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a +fp+ +tpev+a+ldk++ +v ++l+akY+
+               HBA_COLLI   1 VLSANDKSNVKAVFAKIGGQAGDLGGEALERLFITYPQTKTYFPHFDLS------HGSAQIKGHGKKVAEALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAKYR 141
+                             69*********************************************96......9******************************************************************************************7 PP
 
 >> HBAD_PASMO  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  183.5   0.1   3.9e-57   3.9e-57       1     142 []       5     140 ..       5     140 .. 0.99
+   1 !  191.4   0.1   1.7e-59   1.7e-59       3     148 ..       2     141 .]       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 183.5 bits;  conditional E-value: 3.9e-57
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             e+k+l++++wgk+++ ++eiGa+aL r+f++yP+tk+yF++Fd +      +gs+++++hgkkv++al++a+k+ld+l++al++Ls+lHa++l+vdp+nfk+ls++l v la++++ke++pev++a+dk++++va++la+kY
-              HBAD_PASMO   5 EDKKLIQQIWGKLGGAEEEIGADALWRMFHSYPSTKTYFPHFDLS------QGSDQIRGHGKKVVAALSNAIKNLDNLSQALSELSNLHAYNLRVDPVNFKFLSQCLQVSLATRLGKEYSPEVHSAVDKFMSAVASVLAEKY 140
-                             59*****************************************96......9*****************************************************************************************9 PP
+  == domain 1  score: 191.4 bits;  conditional E-value: 1.7e-59
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             l++e+k+l++++wgk+++ ++eiG++aL r+f++yP+tk+yF++Fd +      +gs+++++hgkkv++al++a+k+ld+l++al++Ls+lHa++l+vdp+nfk+ls++l v la++++ke++pev++a+dk++++va++la+kY+
+              HBAD_PASMO   2 LTAEDKKLIQQIWGKLGGAEEEIGADALWRMFHSYPSTKTYFPHFDLS------QGSDQIRGHGKKVVAALSNAIKNLDNLSQALSELSNLHAYNLRVDPVNFKFLSQCLQVSLATRLGKEYSPEVHSAVDKFMSAVASVLAEKYR 141
+                             789*******************************************96......9******************************************************************************************7 PP
 
 >> HBBL_RANCA  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  180.0   0.1   4.7e-56   4.7e-56       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  185.0   0.2   1.6e-57   1.6e-57       4     147 ..       4     145 ..       2     146 .] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 180.0 bits;  conditional E-value: 4.7e-56
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eek++++svw+kv+++++  G+eaL+rlf+vyP+t++yF++F+dl+s+a+++g++kv+ahgkk+l a+++a+++ldd+kg+l++Lse Ha++l+vdpenf+ l+evl+vvl ak++k+f+p+vq++++k+++++  al++ Y
-              HBBL_RANCA   6 EEKAVINSVWQKVDVEQD--GHEALTRLFIVYPWTQRYFSTFGDLSSPAAIAGNPKVHAHGKKILGAIDNAIHNLDDVKGTLHDLSEEHANELHVDPENFRRLGEVLIVVLGAKLGKAFSPQVQHVWEKFIAVLVDALSHSY 145
-                             599**********99988..89********************************************************************************************************************9998 PP
+  == domain 1  score: 185.0 bits;  conditional E-value: 1.6e-57
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   4 sdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             ++eek++++svw+kv+++++  G+eaL+rlf+vyP+t++yF++F+dl+s+a+++g++kv+ahgkk+l a+++a+++ldd+kg+l++Lse Ha++l+vdpenf+ l+evl+vvl ak++k+f+p+vq++++k+++++  al++ Y
+              HBBL_RANCA   4 TAEEKAVINSVWQKVDVEQD--GHEALTRLFIVYPWTQRYFSTFGDLSSPAAIAGNPKVHAHGKKILGAIDNAIHNLDDVKGTLHDLSEEHANELHVDPENFRRLGEVLIVVLGAKLGKAFSPQVQHVWEKFIAVLVDALSHSY 145
+                             579************99988..89**********************************************************************************************************************99 PP
 
 >> HBB2_XENTR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  176.4   0.4   6.2e-55   6.2e-55       1     142 []       6     145 ..       6     145 .. 0.98
+   1 !  180.6   0.7   3.5e-56   3.5e-56       4     147 ..       4     145 ..       2     146 .] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 176.4 bits;  conditional E-value: 6.2e-55
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             eek+++ svwgkv+ +++  G++aL+rl+vvyP+t++yF++F++l++ ++v+g+ kvkahg+kvl+a+g+a+++ldd+k++lk Ls++Ha++l+vdpenfk l++vlv+vlaak++++ftp+vqa+++kl +++  al++ Y
-              HBB2_XENTR   6 EEKATIASVWGKVDIEQD--GHDALSRLLVVYPWTQRYFSSFGNLSNVSAVSGNVKVKAHGNKVLSAVGSAIQHLDDVKSHLKGLSKSHAEDLHVDPENFKRLADVLVIVLAAKLGSAFTPQVQAVWEKLNATLVAALSHGY 145
-                             599**********99888..89***************************************************************************************************************999999877 PP
+  == domain 1  score: 180.6 bits;  conditional E-value: 3.5e-56
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   4 sdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             ++eek+++ svwgkv+ +++  G++aL+rl+vvyP+t++yF++F++l++ ++v+g+ kvkahg+kvl+a+g+a+++ldd+k++lk Ls++Ha++l+vdpenfk l++vlv+vlaak++++ftp+vqa+++kl +++  al++ Y
+              HBB2_XENTR   4 TAEEKATIASVWGKVDIEQD--GHDALSRLLVVYPWTQRYFSSFGNLSNVSAVSGNVKVKAHGNKVLSAVGSAIQHLDDVKSHLKGLSKSHAEDLHVDPENFKRLADVLVIVLAAKLGSAFTPQVQAVWEKLNATLVAALSHGY 145
+                             579************99988..89********************************************************************************************************************9998 PP
+
+>> MYG_MUSAN  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  177.5   0.4   3.2e-55   3.2e-55       7     154 .]       2     148 .]       1     148 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 177.5 bits;  conditional E-value: 3.2e-55
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   7 ekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             ++++v+svw+ ve+d ++iGq++L rlf++yPe++++F+kF++ ks  e+k++a++ka++++vl+alg++vkk++++++ +k+L+++H+t++k++p++f++++++ v vl++++p+e++++vqaa++ ++++++++++++Yk+++fqg
+               MYG_MUSAN   2 DWEKVNSVWSAVESDLTAIGQNILLRLFEQYPESQNHFPKFKN-KSLGELKDTADIKAQADTVLSALGNIVKKKGSHSQPVKALAATHITTHKIPPHYFTKITTIAVDVLSEMYPSEMNAQVQAAFSGAFKIICSDIEKEYKAANFQG 148
+                             8*****************************************9.79*****************************************************************************************************8 PP
 
 >> HBA4_SALIR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  167.7   0.1     3e-52     3e-52       2     142 .]       6     141 ..       5     141 .. 0.98
+   1 !  176.2   0.1   8.3e-55   8.3e-55       3     148 ..       2     142 .]       1     142 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 167.7 bits;  conditional E-value: 3e-52
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             +k++vk++wgk+  +++eiG++aL+r++vvyP+tk yF+++  +       gsa vk+hg +++++++++v ++ddl g l+kLselHatkl+vdp+nfk+l++ l+vv+aa fp+eftpe++ ++dk+l+++a ala+kY
-              HBA4_SALIR   6 DKANVKAIWGKILPKSDEIGEQALSRMLVVYPQTKAYFSHWASV-----APGSAPVKKHGITIMNQIDDCVGHMDDLFGFLTKLSELHATKLRVDPTNFKILAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALALAEKY 141
-                             89************************************999986.....69*****************************************************************************************9 PP
-
->> MYG_MUSAN  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  164.2   0.3   3.5e-51   3.5e-51       2     142 .]       2     141 ..       1     141 [. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 164.2 bits;  conditional E-value: 3.5e-51
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   2 ekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             ++++v+svw+ ve+d ++iG+++L rlf++yPe++++F+kF++ ks  e+k++a++ka++++vl+alg++vkk++++++ +k+L+++H+t++k++p++f++++++ v vl++++p+e++++vqaa++ ++++++++++++Y
-               MYG_MUSAN   2 DWEKVNSVWSAVESDLTAIGQNILLRLFEQYPESQNHFPKFKN-KSLGELKDTADIKAQADTVLSALGNIVKKKGSHSQPVKALAATHITTHKIPPHYFTKITTIAVDVLSEMYPSEMNAQVQAAFSGAFKIICSDIEKEY 141
-                             8*****************************************9.799********************************************************************************************99 PP
+  == domain 1  score: 176.2 bits;  conditional E-value: 8.3e-55
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakYk 148
+                             ls+++k++vk++wgk+  +++eiG++aL+r++vvyP+tk yF+++  +       gsa vk+hg +++++++++v ++ddl g l+kLselHatkl+vdp+nfk+l++ l+vv+aa fp+eftpe++ ++dk+l+++a ala+kY+
+              HBA4_SALIR   2 LSAKDKANVKAIWGKILPKSDEIGEQALSRMLVVYPQTKAYFSHWASV-----APGSAPVKKHGITIMNQIDDCVGHMDDLFGFLTKLSELHATKLRVDPTNFKILAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALALAEKYR 142
+                             899***************************************999986.....69******************************************************************************************7 PP
 
 >> HBB2_TRICR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  118.2   0.0   5.4e-37   5.4e-37       1     142 []       6     145 .]       6     145 .] 0.97
+   1 !  123.1   0.0   1.8e-38   1.8e-38       3     147 ..       3     145 .]       1     145 [] 0.97
 
   Alignments for each domain:
-  == domain 1  score: 118.2 bits;  conditional E-value: 5.4e-37
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i1   1 eekqlvksvwgkveadaaeiGaeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 142
-                             e+++ + ++ gkv++d+  +G++ L+rl+vv P++++yF  F+dl+s +++  ++kv ahg kv+ ++ ea k+ld+l++  ++Ls +H  k+ vdpenfkl s +++v la  +  +f+ + q a++kl++ v++al + Y
-              HBB2_TRICR   6 EDRKEIAAILGKVNVDS--LGGQCLARLIVVNPWSRRYFHDFGDLSSCDAICRNPKVLAHGAKVMRSIVEATKHLDNLREYYADLSVTHSLKFYVDPENFKLFSGIVIVCLALTLQTDFSCHKQLAFEKLMKGVSHALGHGY 145
-                             58999********9875..59*********************************************************************************************************************9877 PP
+  == domain 1  score: 123.1 bits;  conditional E-value: 1.8e-38
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i1   3 lsdeekqlvksvwgkveadaaeiGqeaLerlfvvyPetkeyFdkFddlkseaevkgsakvkahgkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvlaakfpkeftpevqaaldkllelvanalaakY 147
+                             l++e+++ + ++ gkv++d+  +G++ L+rl+vv P++++yF  F+dl+s +++  ++kv ahg kv+ ++ ea k+ld+l++  ++Ls +H  k+ vdpenfkl s +++v la  +  +f+ + q a++kl++ v++al + Y
+              HBB2_TRICR   3 LTAEDRKEIAAILGKVNVDS--LGGQCLARLIVVNPWSRRYFHDFGDLSSCDAICRNPKVLAHGAKVMRSIVEATKHLDNLREYYADLSVTHSLKFYVDPENFKLFSGIVIVCLALTLQTDFSCHKQLAFEKLMKGVSHALGHGY 145
+                             7899************9875..59*********************************************************************************************************************9988 PP
 
 
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (142 nodes)
-Target sequences:                           45  (6519 residues searched)
+Query model(s):                            1  (154 nodes)
+Target sequences:                         45  (6519 residues searched)
 Passed MSV filter:                        45  (1); expected 0.9 (0.02)
 Passed bias filter:                       45  (1); expected 0.9 (0.02)
 Passed Vit filter:                        45  (1); expected 0.0 (0.001)
 Passed Fwd filter:                        45  (1); expected 0.0 (1e-05)
 Initial search space (Z):                 45  [actual number of targets]
 Domain search space  (domZ):              45  [number of targets reported over threshold]
-# CPU time: 0.34u 0.02s 00:00:00.36 Elapsed: 00:00:00.89
-# Mc/sec: 1.04
+# CPU time: 0.19u 0.00s 00:00:00.19 Elapsed: 00:00:00.20
+# Mc/sec: 5.00
 
 @@ New targets included:   1
 @@ New alignment includes: 46 subseqs (was 45), including original query
@@ -1281,660 +1280,660 @@
 @@
 @@ Round:                  3
 @@ Included in MSA:        46 subsequences (query + 45 subseqs from 45 targets)
-@@ Model size:             142 positions
+@@ Model size:             154 positions
 @@
 
 Scores for complete sequences (score includes all domains):
    --- full sequence ---   --- best 1 domain ---    -#dom-
     E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
     ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
-    7.7e-69  221.6   0.1    8.6e-69  221.5   0.1    1.0  1  HBB_MANSP   
-    4.1e-68  219.3   0.2    4.5e-68  219.1   0.2    1.0  1  HBB_URSMA   
-    5.6e-67  215.6   0.5    6.3e-67  215.4   0.5    1.0  1  HBB_RABIT   
-    1.5e-66  214.2   0.1    1.7e-66  214.0   0.1    1.0  1  HBB_CALAR   
-      5e-66  212.5   0.3    5.6e-66  212.4   0.3    1.0  1  HBB_TACAC   
-    5.2e-66  212.5   0.0    5.7e-66  212.3   0.0    1.0  1  HBB_COLLI   
-    6.6e-66  212.1   0.2    7.4e-66  212.0   0.2    1.0  1  HBE_PONPY   
-    7.2e-66  212.0   0.1      8e-66  211.9   0.1    1.0  1  HBB_SUNMU   
-      1e-65  211.5   0.0    1.2e-65  211.3   0.0    1.0  1  HBB_ORNAN   
-    1.5e-65  211.0   0.4    1.7e-65  210.8   0.4    1.0  1  HBB_SPETO   
-    1.6e-65  210.9   0.2    1.8e-65  210.7   0.2    1.0  1  HBB_EQUHE   
-    2.3e-65  210.4   0.9    2.5e-65  210.2   0.9    1.0  1  HBB_SPECI   
-      3e-65  210.0   0.0    3.4e-65  209.8   0.0    1.0  1  HBB_LARRI   
-      8e-65  208.6   0.1    8.9e-65  208.5   0.1    1.0  1  HBB_TRIIN   
-    1.2e-62  201.6   0.0    1.3e-62  201.5   0.0    1.0  1  HBB_TUPGL   
-    1.5e-61  198.0   0.6    1.7e-61  197.8   0.6    1.0  1  HBA_MESAU   
-      3e-61  197.0   0.1    3.4e-61  196.9   0.1    1.0  1  HBB1_VAREX  
-      6e-61  196.1   1.1    6.6e-61  195.9   1.1    1.0  1  HBA_MACFA   
-    9.7e-61  195.4   1.0    1.1e-60  195.2   1.0    1.0  1  HBA_MACSI   
-    3.2e-60  193.7   0.9    3.6e-60  193.6   0.9    1.0  1  HBA2_BOSMU  
-    3.2e-60  193.7   2.0    3.6e-60  193.5   2.0    1.0  1  HBA_PONPY   
-    4.2e-60  193.3   1.5    4.7e-60  193.2   1.5    1.0  1  HBA2_GALCR  
-    5.7e-60  192.9   0.5    6.3e-60  192.7   0.5    1.0  1  HBA_AILME   
-    9.6e-60  192.2   0.6    1.1e-59  192.0   0.6    1.0  1  HBA_FRAPO   
-      1e-59  192.1   0.9    1.1e-59  191.9   0.9    1.0  1  HBA_ANSSE   
-    2.2e-59  191.0   0.6    2.4e-59  190.9   0.6    1.0  1  HBA_PHACO   
-    2.4e-59  190.9   0.2    2.6e-59  190.7   0.2    1.0  1  HBA_PROLO   
-      4e-59  190.1   0.3    4.5e-59  190.0   0.3    1.0  1  HBA_ERIEU   
-    4.2e-59  190.1   0.9    4.7e-59  189.9   0.9    1.0  1  HBA_PAGLA   
-    1.6e-58  188.2   0.6    1.8e-58  188.0   0.6    1.0  1  HBA_TRIOC   
-    3.9e-58  186.9   0.9    4.3e-58  186.8   0.9    1.0  1  HBAD_CHLME  
-    3.5e-57  183.8   0.4    3.9e-57  183.7   0.4    1.0  1  HBA_COLLI   
-    5.8e-57  183.1   0.2    6.5e-57  183.0   0.2    1.0  1  HBBL_RANCA  
-    6.3e-56  179.8   0.1      7e-56  179.6   0.1    1.0  1  HBAD_PASMO  
-    9.4e-56  179.2   0.1      1e-55  179.1   0.1    1.0  1  HBAZ_HORSE  
-      4e-55  177.2   0.7    4.4e-55  177.0   0.7    1.0  1  HBB2_XENTR  
-    9.5e-55  176.0   1.6    1.1e-54  175.8   1.6    1.0  1  MYG_PROGU   
-    2.6e-54  174.6   5.3    2.9e-54  174.4   5.3    1.0  1  MYG_LYCPI   
-    1.1e-53  172.5   1.6    1.2e-53  172.4   1.6    1.0  1  MYG_MOUSE   
-    1.2e-53  172.4   4.3    1.4e-53  172.2   4.3    1.0  1  MYG_SAISC   
-    1.5e-53  172.1   4.2    1.7e-53  171.9   4.2    1.0  1  MYG_HORSE   
-      5e-53  170.4   5.7    5.6e-53  170.2   5.7    1.0  1  MYG_ESCGI   
-    3.8e-52  167.5   0.1    4.2e-52  167.4   0.1    1.0  1  HBA4_SALIR  
-    5.2e-50  160.6   0.0    5.8e-50  160.5   0.0    1.0  1  HBB2_TRICR  
-    2.1e-45  145.7   0.4    2.3e-45  145.5   0.4    1.0  1  MYG_MUSAN   
+    1.5e-69  224.0   0.1    1.7e-69  223.9   0.1    1.0  1  HBB_MANSP   
+    4.6e-69  222.5   0.2      5e-69  222.3   0.2    1.0  1  HBB_URSMA   
+    2.5e-68  220.1   0.6    2.7e-68  220.0   0.6    1.0  1  HBB_RABIT   
+    7.6e-68  218.5   0.0    8.3e-68  218.4   0.0    1.0  1  HBB_SUNMU   
+    9.5e-68  218.2   0.0    1.1e-67  217.9   0.0    1.0  1  HBB_COLLI   
+    1.4e-67  217.6   0.1    1.6e-67  217.5   0.1    1.0  1  HBB_EQUHE   
+    1.5e-67  217.6   0.3    1.6e-67  217.4   0.3    1.0  1  HBB_TACAC   
+    3.3e-67  216.5   0.7    3.6e-67  216.3   0.7    1.0  1  HBB_SPECI   
+    3.4e-67  216.4   0.1    3.8e-67  216.3   0.1    1.0  1  HBB_CALAR   
+    3.7e-67  216.3   0.4    4.1e-67  216.1   0.4    1.0  1  HBB_SPETO   
+    6.6e-67  215.5   0.0    7.2e-67  215.3   0.0    1.0  1  HBB_ORNAN   
+    8.4e-67  215.1   0.3    9.2e-67  215.0   0.3    1.0  1  HBE_PONPY   
+    2.3e-66  213.7   1.7    2.6e-66  213.5   1.7    1.0  1  MYG_ESCGI   
+    2.9e-66  213.4   0.1    3.2e-66  213.2   0.1    1.0  1  HBB_TRIIN   
+    5.3e-66  212.5   0.0    6.4e-66  212.3   0.0    1.0  1  HBB_LARRI   
+    8.7e-66  211.8   1.6    9.6e-66  211.7   1.6    1.0  1  MYG_LYCPI   
+    1.8e-65  210.8   0.2      2e-65  210.6   0.2    1.0  1  MYG_PROGU   
+    2.5e-65  210.3   0.9    2.8e-65  210.2   0.9    1.0  1  MYG_SAISC   
+    2.6e-65  210.3   0.8    2.9e-65  210.1   0.8    1.0  1  MYG_HORSE   
+    9.1e-65  208.5   0.2      1e-64  208.4   0.2    1.0  1  HBA_MESAU   
+    1.3e-64  208.0   0.3    1.4e-64  207.9   0.3    1.0  1  MYG_MOUSE   
+    1.5e-64  207.8   0.0    1.7e-64  207.6   0.0    1.0  1  HBB_TUPGL   
+    1.3e-63  204.7   0.5    1.5e-63  204.6   0.5    1.0  1  HBA_PONPY   
+    2.9e-63  203.6   0.2    3.2e-63  203.5   0.2    1.0  1  HBA_MACFA   
+      4e-63  203.2   0.2    4.4e-63  203.0   0.2    1.0  1  HBA_MACSI   
+      5e-63  202.9   0.1    5.9e-63  202.6   0.1    1.0  1  HBB1_VAREX  
+    5.7e-63  202.7   0.1    6.4e-63  202.5   0.1    1.0  1  HBA_AILME   
+    8.6e-63  202.1   0.3    9.6e-63  201.9   0.3    1.0  1  HBA2_BOSMU  
+    1.8e-62  201.0   0.3      2e-62  200.9   0.3    1.0  1  HBA_FRAPO   
+    1.9e-62  201.0   0.4    2.1e-62  200.8   0.4    1.0  1  HBA2_GALCR  
+    2.1e-62  200.8   0.3    2.4e-62  200.7   0.3    1.0  1  HBA_PHACO   
+      4e-62  199.9   0.3    4.4e-62  199.8   0.3    1.0  1  HBA_ANSSE   
+      4e-62  199.9   0.1    4.5e-62  199.8   0.1    1.0  1  HBA_ERIEU   
+    8.3e-62  198.9   0.3    9.2e-62  198.8   0.3    1.0  1  HBA_PAGLA   
+    9.5e-62  198.7   0.0    1.1e-61  198.6   0.0    1.0  1  HBA_PROLO   
+    2.2e-61  197.5   0.4    2.4e-61  197.4   0.4    1.0  1  HBA_TRIOC   
+    1.2e-60  195.1   0.5    1.3e-60  195.0   0.5    1.0  1  HBAD_CHLME  
+    4.1e-60  193.4   0.1    4.5e-60  193.3   0.1    1.0  1  HBAZ_HORSE  
+      6e-60  192.9   0.2    6.7e-60  192.7   0.2    1.0  1  HBA_COLLI   
+    1.7e-59  191.4   0.2      2e-59  191.2   0.2    1.0  1  HBBL_RANCA  
+    2.2e-59  191.0   0.1    2.4e-59  190.9   0.1    1.0  1  HBAD_PASMO  
+    1.1e-58  188.8   0.6    1.3e-58  188.6   0.6    1.0  1  HBB2_XENTR  
+    5.3e-56  180.0   0.1    5.9e-56  179.9   0.1    1.0  1  HBA4_SALIR  
+    2.5e-54  174.6   0.4    2.8e-54  174.5   0.4    1.0  1  MYG_MUSAN   
+      2e-52  168.4   0.0    2.2e-52  168.3   0.0    1.0  1  HBB2_TRICR  
 
 
 Domain annotation for each sequence (and alignments):
 >> HBB_MANSP  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  221.5   0.1   8.6e-69   8.6e-69       1     142 []       6     145 ..       6     145 .. 0.99
+   1 !  223.9   0.1   1.7e-69   1.7e-69       3     147 ..       3     145 ..       1     146 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 221.5 bits;  conditional E-value: 8.6e-69
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eek++v+++wgkv+vd  e+G+eaLgrll+vyP+t+r+Fd+f++l+s+dav+g++kvkahgkkvl+a++++++hld+lk+++a+LselH++klhvdpenfkll++vl++vla+h++keftp+vqaA++k++a+vanaLa+kY
-               HBB_MANSP   6 EEKTAVTTLWGKVNVD--EVGGEALGRLLVVYPWTQRFFDSFGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLNHLDNLKGTFAQLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
-                             69*************8..89*************************************************************************************************************************9 PP
+  == domain 1  score: 223.9 bits;  conditional E-value: 1.7e-69
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             L+ eek++v+++wgkv+vd  e+G+eaL rllvvyP+t+r+Fd+F+dl+s+d+v+g++kvkahGkkvl a+++ +++ld+lkg++++LselH++kl+vdpenfkll++vlv+vLa++f+keftp+vqaa++k++++vanala+kY
+               HBB_MANSP   3 LTPEEKTAVTTLWGKVNVD--EVGGEALGRLLVVYPWTQRFFDSFGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLNHLDNLKGTFAQLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
+                             89***************97..8*************************************************************************************************************************** PP
 
 >> HBB_URSMA  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  219.1   0.2   4.5e-68   4.5e-68       1     142 []       6     145 ..       6     145 .. 0.99
+   1 !  222.3   0.2     5e-69     5e-69       3     147 ..       3     145 ..       1     146 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 219.1 bits;  conditional E-value: 4.5e-68
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eeks v+ +wgkv+vd  e+G+eaLgrll+vyP+t+r+Fd+f++l+s+da+++++kvkahgkkvl+++++++k+ld+lk+++a+LselH++klhvdpenfkll++vl++vla+h++keftp+vqaA++k++a+vanaLa+kY
-               HBB_URSMA   6 EEKSLVTGLWGKVNVD--EVGGEALGRLLVVYPWTQRFFDSFGDLSSADAIMNNPKVKAHGKKVLNSFSDGLKNLDNLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
-                             69*************8..89*************************************************************************************************************************9 PP
+  == domain 1  score: 222.3 bits;  conditional E-value: 5e-69
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             L+ eek+lv+ +wgkv+vd  e+G+eaL rllvvyP+t+r+Fd+F+dl+s+d++++++kvkahGkkvl+++++ +k+ld+lkg+++kLselH++kl+vdpenfkll++vlv+vLa++f+keftp+vqaa++k++++vanala+kY
+               HBB_URSMA   3 LTGEEKSLVTGLWGKVNVD--EVGGEALGRLLVVYPWTQRFFDSFGDLSSADAIMNNPKVKAHGKKVLNSFSDGLKNLDNLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
+                             899**************97..8*************************************************************************************************************************** PP
 
 >> HBB_RABIT  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  215.4   0.5   6.3e-67   6.3e-67       1     142 []       6     145 ..       6     145 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 215.4 bits;  conditional E-value: 6.3e-67
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eeks+v+a+wgkv+v+  e+G+eaLgrll+vyP+t+r+F++f++l+s++av++++kvkahgkkvl+a++e++ hld+lk+++a+LselH++klhvdpenf+ll++vl++vl++h++keftp+vqaA++k++a+vanaLa+kY
-               HBB_RABIT   6 EEKSAVTALWGKVNVE--EVGGEALGRLLVVYPWTQRFFESFGDLSSANAVMNNPKVKAHGKKVLAAFSEGLSHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVIVLSHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
-                             69*************6..89*************************************************************************************************************************9 PP
-
->> HBB_CALAR  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  214.0   0.1   1.7e-66   1.7e-66       1     142 []       6     145 ..       6     145 .. 0.99
+   1 !  220.0   0.6   2.7e-68   2.7e-68       3     147 ..       3     145 ..       1     146 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 214.0 bits;  conditional E-value: 1.7e-66
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eeks+v+a+wgkv+vd  e+G+eaLgrll+vyP+t+r+F++f++l+++dav++++kvkahgkkvl+a+++++ hld+lk+++a+LselH++klhvdpenf+ll++vl++vla+h++keftp vqaA++k++a+vanaLa+kY
-               HBB_CALAR   6 EEKSAVTALWGKVNVD--EVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMNNPKVKAHGKKVLGAFSDGLTHLDNLKGTFAHLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPVVQAAYQKVVAGVANALAHKY 145
-                             69*************8..89*************************************************************************************************************************9 PP
-
->> HBB_TACAC  
+  == domain 1  score: 220.0 bits;  conditional E-value: 2.7e-68
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             Ls+eek++v+a+wgkv+v+  e+G+eaL rllvvyP+t+r+F++F+dl+s+++v++++kvkahGkkvl+a++e +++ld+lkg+++kLselH++kl+vdpenf+ll++vlv+vL+++f+keftp+vqaa++k++++vanala+kY
+               HBB_RABIT   3 LSSEEKSAVTALWGKVNVE--EVGGEALGRLLVVYPWTQRFFESFGDLSSANAVMNNPKVKAHGKKVLAAFSEGLSHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVIVLSHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
+                             9****************96..8*************************************************************************************************************************** PP
+
+>> HBB_SUNMU  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  212.4   0.3   5.6e-66   5.6e-66       2     142 .]       7     145 ..       6     145 .. 0.99
+   1 !  218.4   0.0   8.3e-68   8.3e-68       3     147 ..       3     145 ..       1     146 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 212.4 bits;  conditional E-value: 5.6e-66
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             ek++v+++wg+v+v+  e+G+eaLgrll+vyP+t+r+F++f++l+s+dav+g++kvkahg+kvlt++g+a+k+ld+lk+++a+LselH++klhvdpenf+ l++vl+vvla+h++keftpe+qaA++k++++v++aLa+kY
-               HBB_TACAC   7 EKTAVTNLWGHVNVN--ELGGEALGRLLVVYPWTQRFFESFGDLSSADAVMGNAKVKAHGAKVLTSFGDALKNLDNLKGTFAKLSELHCDKLHVDPENFNRLGNVLVVVLARHFSKEFTPEAQAAWQKLVSGVSHALAHKY 145
-                             89************7..9**************************************************************************************************************************9 PP
+  == domain 1  score: 218.4 bits;  conditional E-value: 8.3e-68
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             Ls eek+ v+ +wgkv+ d  e+GaeaL rllvvyP+t+r+Fd+F+dl+s+++v+g++kvkahGkkvl++lge v +ld+lkg+++kLselH++kl+vdpenf+ll++vlvvvLa+kf+keftp vqaa++k++++vanala+kY
+               HBB_SUNMU   3 LSGEEKACVTGLWGKVNED--EVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNPKVKAHGKKVLHSLGEGVANLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVVVLASKFGKEFTPPVQAAFQKVVAGVANALAHKY 145
+                             99***************97..8*************************************************************************************************************************** PP
 
 >> HBB_COLLI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  212.3   0.0   5.7e-66   5.7e-66       1     142 []       6     145 ..       6     145 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 212.3 bits;  conditional E-value: 5.7e-66
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eek+ ++++wgkv+v+  ++GaeaL+rll+vyP+t+r+F++f++l+s++a++g+++vkahgkkvlt++g+avk+ld++k+++a+LselH++klhvdpenf+ll+++l+++la+h++k+ftpe qaA++k++++va+aLarkY
-               HBB_COLLI   6 EEKQLITSIWGKVNVA--DCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAHGKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARKY 145
-                             69*************7..8**************************************************************************************************************************9 PP
-
->> HBE_PONPY  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  212.0   0.2   7.4e-66   7.4e-66       1     142 []       6     145 ..       6     145 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 212.0 bits;  conditional E-value: 7.4e-66
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eek++v+++w+k++v+  eaG+eaLgrll+vyP+t+r+Fd+f++l+s++a+ g++kvkahgkkvlt++g+a+k++d+lk ++a+LselH++klhvdpenfkll++v++++la+h++keftpevqaA++k+++ava aLa+kY
-               HBE_PONPY   6 EEKAAVTSLWSKMNVE--EAGGEALGRLLVVYPWTQRFFDSFGNLSSPSAILGNPKVKAHGKKVLTSFGDAIKNMDNLKTTFAKLSELHCDKLHVDPENFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKY 145
-                             69*************6..89*************************************************************************************************************************9 PP
-
->> HBB_SUNMU  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  211.9   0.1     8e-66     8e-66       1     142 []       6     145 ..       6     145 .. 0.99
+   1 !  217.9   0.0   1.1e-67   1.1e-67       4     147 ..       4     145 ..       2     146 .] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 211.9 bits;  conditional E-value: 8e-66
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eek+ v+ +wgkv+ d  e+GaeaLgrll+vyP+t+r+Fd+f++l+s++av+g++kvkahgkkvl++lge+v +ld+lk+++a+LselH++klhvdpenf+ll++vl+vvla++++keftp vqaA++k++a+vanaLa+kY
-               HBB_SUNMU   6 EEKACVTGLWGKVNED--EVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNPKVKAHGKKVLHSLGEGVANLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVVVLASKFGKEFTPPVQAAFQKVVAGVANALAHKY 145
-                             699***********97..89*************************************************************************************************************************9 PP
-
->> HBB_ORNAN  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  211.3   0.0   1.2e-65   1.2e-65       2     142 .]       7     145 ..       6     145 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 211.3 bits;  conditional E-value: 1.2e-65
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eks+v+++wgkv+++  e+G+eaLgrll+vyP+t+r+F+ f++l+s+ av+g++kvkahg+kvlt++g+a+k+lddlk+++a+LselH++klhvdpenf+ l++vlivvla+h++k+f+pevqaA++k++++va+aL +kY
-               HBB_ORNAN   7 EKSAVTNLWGKVNIN--ELGGEALGRLLVVYPWTQRFFEAFGDLSSAGAVMGNPKVKAHGAKVLTSFGDALKNLDDLKGTFAKLSELHCDKLHVDPENFNRLGNVLIVVLARHFSKDFSPEVQAAWQKLVSGVAHALGHKY 145
-                             89***********96..9**************************************************************************************************************************9 PP
-
->> HBB_SPETO  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  210.8   0.4   1.7e-65   1.7e-65       2     142 .]       7     145 ..       6     145 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 210.8 bits;  conditional E-value: 1.7e-65
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             ek++++++wgkv+++  e+GaeaLgrll+vyP+t+r+Fd+f++l+s++av+g++kvkahgkkv++++++++khld+lk+++a LselH++klhvdpenfkll++++++v+a+hl+k+ftpe+qaA++k++a+vanaL++kY
-               HBB_SPETO   7 EKNAISTAWGKVNAA--EIGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALSHKY 145
-                             899**********96..9**************************************************************************************************************************9 PP
+  == domain 1  score: 217.9 bits;  conditional E-value: 1.1e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   4 saeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             saeekql++++wgkv+v  +++GaeaL+rll+vyP+t+r+F++F++l+s+++++g+++vkahGkkvlt++g+avk+ld++kg++++LselH++kl+vdpenf+ll+++lv++Laa+f+k+ftpe+qaa++kl+++va+ala+kY
+               HBB_COLLI   4 SAEEKQLITSIWGKVNV--ADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAHGKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARKY 145
+                             89**************9..58*************************************************************************************************************************** PP
 
 >> HBB_EQUHE  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  210.7   0.2   1.8e-65   1.8e-65       1     142 []       6     145 ..       6     145 .. 0.99
+   1 !  217.5   0.1   1.6e-67   1.6e-67       3     147 ..       3     145 ..       1     146 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 210.7 bits;  conditional E-value: 1.8e-65
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eek++v a+w+kv+ +  e+G+eaLgrll+vyP+t+r+Fd+f++l++++av+g++kvkahgkkvl+++ge+v+hld+lk+++a+LselH++klhvdpenf+ll++vl+vvla+h++k+ftpe qa+++k++a+vanaLa+kY
-               HBB_EQUHE   6 EEKAAVLALWDKVNEE--EVGGEALGRLLVVYPWTQRFFDSFGDLSNPAAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAQLSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKY 145
-                             69***********985..99*************************************************************************************************************************9 PP
+  == domain 1  score: 217.5 bits;  conditional E-value: 1.6e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             Ls eek++v a+w+kv+ +  e+G+eaL rllvvyP+t+r+Fd+F+dl+++++v+g++kvkahGkkvl+++ge v++ld+lkg++++LselH++kl+vdpenf+ll++vlvvvLa++f+k+ftpe qa+++k++++vanala+kY
+               HBB_EQUHE   3 LSGEEKAAVLALWDKVNEE--EVGGEALGRLLVVYPWTQRFFDSFGDLSNPAAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAQLSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKY 145
+                             99**************985..9*************************************************************************************************************************** PP
+
+>> HBB_TACAC  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  217.4   0.3   1.6e-67   1.6e-67       3     147 ..       3     145 ..       1     146 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 217.4 bits;  conditional E-value: 1.6e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             Ls +ek++v+++wg+v+v+  elG+eaL rllvvyP+t+r+F++F+dl+s+d+v+g+akvkahG+kvlt++g+a+k+ld+lkg+++kLselH++kl+vdpenf+ l++vlvvvLa++f+keftpe+qaa++kl+++v++ala+kY
+               HBB_TACAC   3 LSGSEKTAVTNLWGHVNVN--ELGGEALGRLLVVYPWTQRFFESFGDLSSADAVMGNAKVKAHGAKVLTSFGDALKNLDNLKGTFAKLSELHCDKLHVDPENFNRLGNVLVVVLARHFSKEFTPEAQAAWQKLVSGVSHALAHKY 145
+                             899**************96..8*************************************************************************************************************************** PP
 
 >> HBB_SPECI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  210.2   0.9   2.5e-65   2.5e-65       2     142 .]       7     145 ..       6     145 .. 0.99
+   1 !  216.3   0.7   3.6e-67   3.6e-67       3     147 ..       3     145 ..       1     146 [] 0.98
+
+  Alignments for each domain:
+  == domain 1  score: 216.3 bits;  conditional E-value: 3.6e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             Ls++ek++++++wgkv++  +e+GaeaL rllvvyP+t+r+Fd+F+dl+s+++v+g+akvkahGkkv++++++ +k+ld+lkg++++LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k++++vanala+kY
+               HBB_SPECI   3 LSDGEKNAISTAWGKVHA--AEVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALAHKY 145
+                             9***************76..69*************************************************************************************************************************** PP
+
+>> HBB_CALAR  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  216.3   0.1   3.8e-67   3.8e-67       3     147 ..       3     145 ..       1     146 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 216.3 bits;  conditional E-value: 3.8e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             L+ eek++v+a+wgkv+vd  e+G+eaL rllvvyP+t+r+F++F+dl+++d+v++++kvkahGkkvl a+++ +++ld+lkg++++LselH++kl+vdpenf+ll++vlv+vLa++f+keftp vqaa++k++++vanala+kY
+               HBB_CALAR   3 LTGEEKSAVTALWGKVNVD--EVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMNNPKVKAHGKKVLGAFSDGLTHLDNLKGTFAHLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPVVQAAYQKVVAGVANALAHKY 145
+                             899**************97..8*************************************************************************************************************************** PP
+
+>> HBB_SPETO  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  216.1   0.4   4.1e-67   4.1e-67       3     147 ..       3     145 ..       1     146 [] 0.98
+
+  Alignments for each domain:
+  == domain 1  score: 216.1 bits;  conditional E-value: 4.1e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             L+++ek++++++wgkv++  +e+GaeaL rllvvyP+t+r+Fd+F+dl+s+++v+g+akvkahGkkv++++++ +k+ld+lkg++++LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k++++vanal++kY
+               HBB_SPETO   3 LTDGEKNAISTAWGKVNA--AEIGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALSHKY 145
+                             99**************98..59*************************************************************************************************************************** PP
+
+>> HBB_ORNAN  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  215.3   0.0   7.2e-67   7.2e-67       3     147 ..       3     145 ..       1     146 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 210.2 bits;  conditional E-value: 2.5e-65
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             ek++++++wgkv ++  e+GaeaLgrll+vyP+t+r+Fd+f++l+s++av+g++kvkahgkkv++++++++khld+lk+++a LselH++klhvdpenfkll++++++v+a+hl+k+ftpe+qaA++k++a+vanaLa+kY
-               HBB_SPECI   7 EKNAISTAWGKVHAA--EVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALAHKY 145
-                             899*********875..99*************************************************************************************************************************9 PP
+  == domain 1  score: 215.3 bits;  conditional E-value: 7.2e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             Ls +ek++v+++wgkv+++  elG+eaL rllvvyP+t+r+F+ F+dl+s+ +v+g++kvkahG+kvlt++g+a+k+lddlkg+++kLselH++kl+vdpenf+ l++vl+vvLa++f+k+f+pevqaa++kl+++va+al +kY
+               HBB_ORNAN   3 LSGGEKSAVTNLWGKVNIN--ELGGEALGRLLVVYPWTQRFFEAFGDLSSAGAVMGNPKVKAHGAKVLTSFGDALKNLDDLKGTFAKLSELHCDKLHVDPENFNRLGNVLIVVLARHFSKDFSPEVQAAWQKLVSGVAHALGHKY 145
+                             899**************96..8*************************************************************************************************************************** PP
+
+>> HBE_PONPY  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  215.0   0.3   9.2e-67   9.2e-67       4     147 ..       4     145 ..       1     146 [] 0.98
+
+  Alignments for each domain:
+  == domain 1  score: 215.0 bits;  conditional E-value: 9.2e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   4 saeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             +aeek++v+++w+k++v+  e G+eaL rllvvyP+t+r+Fd+F++l+s++++ g++kvkahGkkvlt++g+a+k++d+lk++++kLselH++kl+vdpenfkll++v+v++La++f+keftpevqaa++kl+++va ala+kY
+               HBE_PONPY   4 TAEEKAAVTSLWSKMNVE--EAGGEALGRLLVVYPWTQRFFDSFGNLSSPSAILGNPKVKAHGKKVLTSFGDAIKNMDNLKTTFAKLSELHCDKLHVDPENFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKY 145
+                             89**************97..78************************************************************************************************************************** PP
+
+>> MYG_ESCGI  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  213.5   1.7   2.6e-66   2.6e-66       2     154 .]       1     153 []       1     153 [] 1.00
+
+  Alignments for each domain:
+  == domain 1  score: 213.5 bits;  conditional E-value: 2.6e-66
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             vLs++e+qlv ++w+kve+d++++G+++L+rl++ +Pet ++FdkFk+lk+e+e+k+s+++k+hG++vltalg ++kk+++++++lk+L+++Hatk+k+++++++++s+++++vL++++p++f++++qaa++k+lel+++++aakYkelgfqg
+               MYG_ESCGI   1 VLSDAEWQLVLNIWAKVEADVAGHGQDILIRLFKGHPETLEKFDKFKHLKTEAEMKASEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSRHPGDFGADAQAAMNKALELFRKDIAAKYKELGFQG 153
+                             79******************************************************************************************************************************************************8 PP
+
+>> HBB_TRIIN  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  213.2   0.1   3.2e-66   3.2e-66       3     147 ..       3     145 ..       1     146 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 213.2 bits;  conditional E-value: 3.2e-66
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             L+ eek+lv  +w+kv+v+  e+G+eaL rllvvyP+t+r+F++F+dl+s++++++++kvkahG+kv+t++g+ +k+l+dlkga+++LselH++kl+vdpenf+ll++vlv+vLa++f+kef+pe+qaa++k++++vanala+kY
+               HBB_TRIIN   3 LTPEEKALVIGLWAKVNVK--EYGGEALGRLLVVYPWTQRFFEHFGDLSSASAIMNNPKVKAHGEKVFTSFGDGLKHLEDLKGAFAELSELHCDKLHVDPENFRLLGNVLVCVLARHFGKEFSPEAQAAYQKVVAGVANALAHKY 145
+                             89***************96..8*************************************************************************************************************************** PP
 
 >> HBB_LARRI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  209.8   0.0   3.4e-65   3.4e-65       1     142 []       6     145 ..       6     145 .. 0.99
+   1 !  212.3   0.0   6.4e-66   6.4e-66       4     147 ..       4     145 ..       2     146 .] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 209.8 bits;  conditional E-value: 3.4e-65
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eek+ ++ +wgkv+v+  ++GaeaL+rll+vyP+t+r+F +f++l+s++a++g+++v+ahgkkvlt++geavk+ld++k+++a+LselH++klhvdpenf+ll+++li+vla+h+ k+ftp+ qaA++k++++va+aLarkY
-               HBB_LARRI   6 EEKQLITGLWGKVNVA--DCGAEALARLLIVYPWTQRFFASFGNLSSPTAINGNPMVRAHGKKVLTSFGEAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFAKDFTPDSQAAWQKLVRVVAHALARKY 145
-                             69*************7..8**************************************************************************************************************************9 PP
-
->> HBB_TRIIN  
+  == domain 1  score: 212.3 bits;  conditional E-value: 6.4e-66
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   4 saeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             saeekql++ +wgkv+v  +++GaeaL+rll+vyP+t+r+F +F++l+s+++++g++ v+ahGkkvlt++geavk+ld++k+++++LselH++kl+vdpenf+ll+++l++vLaa+f k+ftp+ qaa++kl+++va+ala+kY
+               HBB_LARRI   4 SAEEKQLITGLWGKVNV--ADCGAEALARLLIVYPWTQRFFASFGNLSSPTAINGNPMVRAHGKKVLTSFGEAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFAKDFTPDSQAAWQKLVRVVAHALARKY 145
+                             89**************9..58*************************************************************************************************************************** PP
+
+>> MYG_LYCPI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  208.5   0.1   8.9e-65   8.9e-65       1     142 []       6     145 ..       6     145 .. 0.99
+   1 !  211.7   1.6   9.6e-66   9.6e-66       3     154 .]       2     153 .]       1     153 [] 1.00
+
+  Alignments for each domain:
+  == domain 1  score: 211.7 bits;  conditional E-value: 9.6e-66
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             Ls++e+q v ++wgkve+d++++G+e+L+rl++++Pet ++FdkFk+lk+ede+kgs+++k+hG++vltalg ++kk+++++++lk+L+++Hatk+k+++++++++s+++++vL++k++++f+++++aa++k+lel++n++aakYkelgfqg
+               MYG_LYCPI   2 LSDGEWQIVLNIWGKVETDLAGHGQEVLIRLFKNHPETLDKFDKFKHLKTEDEMKGSEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPVKYLEFISDAIIQVLQNKHSGDFHADTEAAMKKALELFRNDIAAKYKELGFQG 153
+                             89*****************************************************************************************************************************************************8 PP
+
+>> MYG_PROGU  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  210.6   0.2     2e-65     2e-65       3     154 .]       2     153 .]       1     153 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 208.5 bits;  conditional E-value: 8.9e-65
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eek+ v  +w kv+v+  e+G+eaLgrll+vyP+t+r+F++f++l+s++a+++++kvkahg+kv t++g+++khl+dlk+a+aeLselH++klhvdpenf+ll++vl++vla+h++kef+pe+qaA++k++a+vanaLa+kY
-               HBB_TRIIN   6 EEKALVIGLWAKVNVK--EYGGEALGRLLVVYPWTQRFFEHFGDLSSASAIMNNPKVKAHGEKVFTSFGDGLKHLEDLKGAFAELSELHCDKLHVDPENFRLLGNVLVCVLARHFGKEFSPEAQAAYQKVVAGVANALAHKY 145
-                             699************6..9**************************************************************************************************************************9 PP
-
->> HBB_TUPGL  
+  == domain 1  score: 210.6 bits;  conditional E-value: 2e-65
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             Ls++e+qlv +vwgkve+d++++G+e+L+rl++ +Pet ++FdkFk+lk+ede+++s+++k+hG++vltalg ++kk+++++++l++L+++Hatk+k+++++++++se++++vL++k+p++f++++q+a++k+lel++n++aakYkelgfqg
+               MYG_PROGU   2 LSDGEWQLVLNVWGKVEGDLSGHGQEVLIRLFKGHPETLEKFDKFKHLKAEDEMRASEELKKHGTTVLTALGGILKKKGQHAAELAPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDIAAKYKELGFQG 153
+                             89*****************************************************************************************************************************************************8 PP
+
+>> MYG_SAISC  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  201.5   0.0   1.3e-62   1.3e-62       1     142 []       6     145 ..       6     145 .. 0.99
+   1 !  210.2   0.9   2.8e-65   2.8e-65       3     154 .]       2     153 .]       1     153 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 201.5 bits;  conditional E-value: 1.3e-62
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eek++v+ +wgkv+ +  ++G++ Lg ll+vyP+t+r+Fd+f++l+s++av+ ++kvkahgkkvlt+++++++hld+lk+++a+LselH++klhvdpenf+ll++vl+ vla++++ eftp+vqaA++k++a+vanaLa+kY
-               HBB_TUPGL   6 EEKAAVTGLWGKVDLE--KVGGQSLGSLLIVYPWTQRFFDSFGDLSSPSAVMSNPKVKAHGKKVLTSFSDGLNHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVRVLACNFGPEFTPQVQAAFQKVVAGVANALAHKY 145
-                             69***********997..57*************************************************************************************************************************9 PP
+  == domain 1  score: 210.2 bits;  conditional E-value: 2.8e-65
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             Ls++e+qlv ++wgkve+d+ ++G+e+L+ l++ +Pet ++FdkFk+lksede+k+s+++k+hG++vltalg ++kk+++++++lk+L+++Hatk+k+++++++l+s+++v+vL++k+p++f++++q+a++k+lel++n++aakYkelgfqg
+               MYG_SAISC   2 LSDGEWQLVLNIWGKVEADIPSHGQEVLISLFKGHPETLEKFDKFKHLKSEDEMKASEELKKHGTTVLTALGGILKKKGQHEAELKPLAQSHATKHKIPVKYLELISDAIVHVLQKKHPGDFGADAQGAMKKALELFRNDMAAKYKELGFQG 153
+                             89*****************************************************************************************************************************************************8 PP
+
+>> MYG_HORSE  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  210.1   0.8   2.9e-65   2.9e-65       3     154 .]       2     153 .]       1     153 [] 1.00
+
+  Alignments for each domain:
+  == domain 1  score: 210.1 bits;  conditional E-value: 2.9e-65
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             Ls++e+q+v +vwgkve+d++++G+e+L+rl++ +Pet ++FdkFk+lk+e+e+k+s+++k+hG+ vltalg ++kk+++++++lk+L+++Hatk+k+++++++++s+++++vL++k+p++f++++q+a++k+lel++n++aakYkelgfqg
+               MYG_HORSE   2 LSDGEWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSKHPGNFGADAQGAMTKALELFRNDIAAKYKELGFQG 153
+                             89*****************************************************************************************************************************************************8 PP
 
 >> HBA_MESAU  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  197.8   0.6   1.7e-61   1.7e-61       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  208.4   0.2     1e-64     1e-64       2     148 ..       1     141 []       1     141 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 208.4 bits;  conditional E-value: 1e-64
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLsa++k++++++wgk++++a e+GaeaLer++ vyP+tk+yF++F+ +      +gsa+vk+hGkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p++ftp+v+a+ldk++++v+++l++kY+
+               HBA_MESAU   1 VLSAKDKTNISEAWGKIGGHAGEYGAEALERMFFVYPTTKTYFPHFDVS------HGSAQVKGHGKKVADALTNAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLANHHPADFTPAVHASLDKFFASVSTVLTSKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
+
+>> MYG_MOUSE  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  207.9   0.3   1.4e-64   1.4e-64       3     154 .]       2     153 .]       1     153 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 197.8 bits;  conditional E-value: 1.7e-61
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k++++++wgk+++++ e+GaeaL+r++ vyP+tk+yF++f+ +      +gs++vk+hgkkv++al++av hlddl++al++Ls+lHa+kl+vdp+nfklls++l+v+la+h+p++ftp+v+a+ldkf+a+v+++L++kY
-               HBA_MESAU   6 DKTNISEAWGKIGGHAGEYGAEALERMFFVYPTTKTYFPHFDVS------HGSAQVKGHGKKVADALTNAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLANHHPADFTPAVHASLDKFFASVSTVLTSKY 140
-                             89******************************************......******************************************************************************************9 PP
-
->> HBB1_VAREX  
+  == domain 1  score: 207.9 bits;  conditional E-value: 1.4e-64
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             Ls++e+qlv +vwgkve+d++++G+e+L+ l++++Pet ++FdkFk+lkse+++kgs+++k+hG +vltalg+++kk++++++++++L+++Hatk+k+++++++++se+++ vL+++++++f++++q+a++k+lel++n++aakYkelgfqg
+               MYG_MOUSE   2 LSDGEWQLVLNVWGKVEADLAGHGQEVLIGLFKTHPETLDKFDKFKNLKSEEDMKGSEDLKKHGCTVLTALGTILKKKGQHAAEIQPLAQSHATKHKIPVKYLEFISEIIIEVLKKRHSGDFGADAQGAMSKALELFRNDIAAKYKELGFQG 153
+                             89*****************************************************************************************************************************************************8 PP
+
+>> HBB_TUPGL  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  196.9   0.1   3.4e-61   3.4e-61       1     142 []       6     145 ..       6     145 .. 0.99
+   1 !  207.6   0.0   1.7e-64   1.7e-64       3     147 ..       3     145 ..       1     146 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 196.9 bits;  conditional E-value: 3.4e-61
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eek+ + ++wgk++v    +G+e+L+ ll++yP+t+r+F++f++l+s++a+ g+++vkahgkkvlt++g+a+k+ld++k+++a+LselH++klhvdp+nfkll++vl++vla h++keftp+++aA++k++++v++ Lar+Y
-              HBB1_VAREX   6 EEKQLICSLWGKIDVG--LIGGETLAGLLVIYPWTQRQFSHFGNLSSPTAIAGNPRVKAHGKKVLTSFGDAIKNLDNIKDTFAKLSELHCDKLHVDPTNFKLLGNVLVIVLADHHGKEFTPAHHAAYQKLVNVVSHSLARRY 145
-                             69************96..69************************************************************************************************************************99 PP
+  == domain 1  score: 207.6 bits;  conditional E-value: 1.7e-64
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             Ls eek++v+ +wgkv+ +  ++G++ L  ll+vyP+t+r+Fd+F+dl+s+++v++++kvkahGkkvlt++++ +++ld+lkg+++kLselH++kl+vdpenf+ll++vlv vLa++f+ eftp+vqaa++k++++vanala+kY
+               HBB_TUPGL   3 LSGEEKAAVTGLWGKVDLE--KVGGQSLGSLLIVYPWTQRFFDSFGDLSSPSAVMSNPKVKAHGKKVLTSFSDGLNHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVRVLACNFGPEFTPQVQAAFQKVVAGVANALAHKY 145
+                             99**************885..8*************************************************************************************************************************** PP
+
+>> HBA_PONPY  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  204.6   0.5   1.5e-63   1.5e-63       2     148 ..       1     141 []       1     141 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 204.6 bits;  conditional E-value: 1.5e-63
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLs ++k++vk++wgkv+++a ++GaeaLer++ ++P+tk+yF++F+ +      +gsa+vk+hGkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+l++v+++l++kY+
+               HBA_PONPY   1 VLSPADKTNVKTAWGKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKDHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
 
 >> HBA_MACFA  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  195.9   1.1   6.6e-61   6.6e-61       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  203.5   0.2   3.2e-63   3.2e-63       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 195.9 bits;  conditional E-value: 6.6e-61
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k++v+a+wgkv++++ e+GaeaL+r++l++P+tk+yF++f+l+      +gs++vk+hgkkv++al++av h+dd+++al++Ls+lHa+kl+vdp+nfklls++l+v+la+hlp+eftp+v+a+ldkfla+v+++L++kY
-               HBA_MACFA   6 DKTNVKAAWGKVGGHAGEYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
-                             89******************************************......******************************************************************************************9 PP
+  == domain 1  score: 203.5 bits;  conditional E-value: 3.2e-63
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLs ++k++vka+wgkv+++a e+GaeaLer++ ++P+tk+yF++F+ +      +gsa+vk+hGkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+l++v+++l++kY+
+               HBA_MACFA   1 VLSPADKTNVKAAWGKVGGHAGEYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
 
 >> HBA_MACSI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  195.2   1.0   1.1e-60   1.1e-60       2     142 .]       6     140 ..       5     140 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 195.2 bits;  conditional E-value: 1.1e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k++v+ +wgkv++++ e+GaeaL+r++l++P+tk+yF++f+l+      +gs++vk+hgkkv++al++av h+dd+++al++Ls+lHa+kl+vdp+nfklls++l+v+la+hlp+eftp+v+a+ldkfla+v+++L++kY
-               HBA_MACSI   6 DKTNVKDAWGKVGGHAGEYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
-                             89******************************************......******************************************************************************************9 PP
-
->> HBA2_BOSMU  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  193.6   0.9   3.6e-60   3.6e-60       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  203.0   0.2   4.4e-63   4.4e-63       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 193.6 bits;  conditional E-value: 3.6e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k +v+a+wgkv+++++e+GaeaL+r++l++P+tk+yF++f+l+      +gs++vk+hg+kv++al++av hlddl++al+eLs+lHa+kl+vdp+nfklls+ l+v+la+hlp++ftp+v+a+ldkfla+v+++L++kY
-              HBA2_BOSMU   6 DKGNVKAAWGKVGGHAAEYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKGHGAKVAAALTKAVGHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVTLASHLPSDFTPAVHASLDKFLANVSTVLTSKY 140
-                             899*****************************************......******************************************************************************************9 PP
-
->> HBA_PONPY  
+  == domain 1  score: 203.0 bits;  conditional E-value: 4.4e-63
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLs ++k++vk++wgkv+++a e+GaeaLer++ ++P+tk+yF++F+ +      +gsa+vk+hGkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+l++v+++l++kY+
+               HBA_MACSI   1 VLSPADKTNVKDAWGKVGGHAGEYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
+
+>> HBB1_VAREX  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  193.5   2.0   3.6e-60   3.6e-60       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  202.6   0.1   5.9e-63   5.9e-63       4     147 ..       4     145 ..       2     146 .] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 193.5 bits;  conditional E-value: 3.6e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k++v+++wgkv++++ ++GaeaL+r++l++P+tk+yF++f+l+      +gs++vk hgkkv++al++av h+dd+++al++Ls+lHa+kl+vdp+nfklls++l+v+la+hlp+eftp+v+a+ldkfla+v+++L++kY
-               HBA_PONPY   6 DKTNVKTAWGKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKDHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
-                             89******************************************......******************************************************************************************9 PP
-
->> HBA2_GALCR  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  193.2   1.5   4.7e-60   4.7e-60       2     142 .]       6     140 ..       5     140 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 193.2 bits;  conditional E-value: 4.7e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +ks+v+a+w+kv++++ ++GaeaL+r++l++P+tk+yF++f+l+      +gs +vk+hgkkv++al++av+h+dd+++al++Ls+lHa+kl+vdp+nfkll ++l+v+la+h+p+eftp+v+a+ldkf+a+v+++L++kY
-              HBA2_GALCR   6 DKSNVKAAWEKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLS------HGSTQVKGHGKKVADALTNAVLHVDDMPSALSALSDLHAHKLRVDPVNFKLLRHCLLVTLACHHPAEFTPAVHASLDKFMASVSTVLTSKY 140
-                             8*******************************************......******************************************************************************************9 PP
+  == domain 1  score: 202.6 bits;  conditional E-value: 5.9e-63
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   4 saeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             +aeekql+ ++wgk++v    +G+e+L+ llv yP+t+r+F++F++l+s+++++g+++vkahGkkvlt++g+a+k+ld++k++++kLselH++kl+vdp+nfkll++vlv+vLa +++keftp+++aa++kl+++v+++la++Y
+              HBB1_VAREX   4 TAEEKQLICSLWGKIDVG--LIGGETLAGLLVIYPWTQRQFSHFGNLSSPTAIAGNPRVKAHGKKVLTSFGDAIKNLDNIKDTFAKLSELHCDKLHVDPTNFKLLGNVLVIVLADHHGKEFTPAHHAAYQKLVNVVSHSLARRY 145
+                             79*************996..69************************************************************************************************************************** PP
 
 >> HBA_AILME  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  192.7   0.5   6.3e-60   6.3e-60       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  202.5   0.1   6.4e-63   6.4e-63       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 192.7 bits;  conditional E-value: 6.3e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k++v+a+w+k+++++ e+G+eaL+r + ++P+tk+yF++f+l+      +gs++vkahgkkv++al++av hlddl++al++Ls+lHa+kl+vdp+nfklls++l+v+la+h+p+eftp+v+a+ldkf++av+++L++kY
-               HBA_AILME   6 DKTNVKATWDKIGGHAGEYGGEALERTFASFPTTKTYFPHFDLS------PGSAQVKAHGKKVADALTTAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLASHHPAEFTPAVHASLDKFFSAVSTVLTSKY 140
-                             89******************************************......******************************************************************************************9 PP
+  == domain 1  score: 202.5 bits;  conditional E-value: 6.4e-63
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLs ++k++vka w+k++++a e+G+eaLer + ++P+tk+yF++F+ +       gsa+vkahGkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v+a+ldk++++v+++l++kY+
+               HBA_AILME   1 VLSPADKTNVKATWDKIGGHAGEYGGEALERTFASFPTTKTYFPHFDLS------PGSAQVKAHGKKVADALTTAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLASHHPAEFTPAVHASLDKFFSAVSTVLTSKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
+
+>> HBA2_BOSMU  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  201.9   0.3   9.6e-63   9.6e-63       2     148 ..       1     141 []       1     141 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 201.9 bits;  conditional E-value: 9.6e-63
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLsa++k +vka+wgkv+++a+e+GaeaLer++ ++P+tk+yF++F+ +      +gsa+vk+hG+kv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls+ l+v+La+++p++ftp+v+a+ldk+l+ v+++l++kY+
+              HBA2_BOSMU   1 VLSAADKGNVKAAWGKVGGHAAEYGAEALERMFLSFPTTKTYFPHFDLS------HGSAQVKGHGAKVAAALTKAVGHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVTLASHLPSDFTPAVHASLDKFLANVSTVLTSKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
 
 >> HBA_FRAPO  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  192.0   0.6   1.1e-59   1.1e-59       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  200.9   0.3     2e-62     2e-62       2     148 ..       1     141 []       1     141 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 200.9 bits;  conditional E-value: 2e-62
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLsa++k++vk ++gk++++ae++GaeaLer++++yP+tk+yF++F+ +      +gsa+vk+hGkkv++al ea +++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l++v n+l+akY+
+               HBA_FRAPO   1 VLSAADKNNVKGIFGKISSHAEDYGAEALERMFITYPSTKTYFPHFDLS------HGSAQVKGHGKKVVAALIEAANHIDDIAGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGNVLTAKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
+
+>> HBA2_GALCR  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  200.8   0.4   2.1e-62   2.1e-62       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 192.0 bits;  conditional E-value: 1.1e-59
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k++v+ ++gk+++++e++GaeaL+r++++yP tk+yF++f+l+      +gs++vk+hgkkv++al ea++h+dd++++l++Ls+lHa+kl+vdp+nfkll+++++vv+aih+p+++tpev+a+ldkfl+av n+L++kY
-               HBA_FRAPO   6 DKNNVKGIFGKISSHAEDYGAEALERMFITYPSTKTYFPHFDLS------HGSAQVKGHGKKVVAALIEAANHIDDIAGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGNVLTAKY 140
-                             89******************************************......******************************************************************************************9 PP
+  == domain 1  score: 200.8 bits;  conditional E-value: 2.1e-62
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLs ++k++vka+w+kv+++a ++GaeaLer++ ++P+tk+yF++F+ +      +gs++vk+hGkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfkll ++l+v+La+++p+eftp+v+a+ldk++++v+++l++kY+
+              HBA2_GALCR   1 VLSPTDKSNVKAAWEKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLS------HGSTQVKGHGKKVADALTNAVLHVDDMPSALSALSDLHAHKLRVDPVNFKLLRHCLLVTLACHHPAEFTPAVHASLDKFMASVSTVLTSKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
+
+>> HBA_PHACO  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  200.7   0.3   2.4e-62   2.4e-62       2     148 ..       1     141 []       1     141 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 200.7 bits;  conditional E-value: 2.4e-62
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLsa++k++vk +++k+ ++aee+GaeaLer++++yP+tk+yF++F+ +      +gsa++k+hGkkv++al eav+++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l++v ++l+akY+
+               HBA_PHACO   1 VLSAADKNNVKGIFTKIAGHAEEYGAEALERMFITYPSTKTYFPHFDLS------HGSAQIKGHGKKVVAALIEAVNHIDDITGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGTVLTAKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
 
 >> HBA_ANSSE  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  191.9   0.9   1.1e-59   1.1e-59       2     142 .]       6     140 ..       5     140 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 191.9 bits;  conditional E-value: 1.1e-59
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k +v++v+gk+++++ee+Gae+L+r++ ++P+tk+yF++f+l+      +gs+++kahgkkv++al+ea++h+dd+++al++Ls+lHa+kl+vdp+nfk+l+++++vvlaih+p+ +tpev+a++dkfl+ava++L++kY
-               HBA_ANSSE   6 DKGNVKTVFGKIGGHAEEYGAETLQRMFQTFPQTKTYFPHFDLQ------PGSAQIKAHGKKVAAALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKFLGHCFLVVLAIHHPSLLTPEVHASMDKFLCAVATVLTAKY 140
-                             899****************************************9......******************************************************************************************9 PP
-
->> HBA_PHACO  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  190.9   0.6   2.4e-59   2.4e-59       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  199.8   0.3   4.4e-62   4.4e-62       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 190.9 bits;  conditional E-value: 2.4e-59
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k++v+ +++k+ +++ee+GaeaL+r++++yP tk+yF++f+l+      +gs+++k+hgkkv++al eav+h+dd+ ++l++Ls+lHa+kl+vdp+nfkll+++++vv+aih+p+++tpev+a+ldkfl+av ++L++kY
-               HBA_PHACO   6 DKNNVKGIFTKIAGHAEEYGAEALERMFITYPSTKTYFPHFDLS------HGSAQIKGHGKKVVAALIEAVNHIDDITGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGTVLTAKY 140
-                             89******************************************......******************************************************************************************9 PP
-
->> HBA_PROLO  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  190.7   0.2   2.6e-59   2.6e-59       2     142 .]       6     140 ..       5     140 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 190.7 bits;  conditional E-value: 2.6e-59
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k++++a+w+k+++++ e+G+eaL+r + ++P+tk+yF++f+l+      +gs++vkahgkkv++al++av hlddl++al++Ls+lHa+kl+vdp+nfklls++l+v+la+h+p+eftp+v+a+ldkf+ +v+++L++kY
-               HBA_PROLO   6 DKANIKATWDKIGGHAGEYGGEALERTFASFPTTKTYFPHFDLS------PGSAQVKAHGKKVADALTLAVGHLDDLPGALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPAEFTPAVHASLDKFFTSVSTVLTSKY 140
-                             89******************************************......******************************************************************************************9 PP
+  == domain 1  score: 199.8 bits;  conditional E-value: 4.4e-62
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLsa++k +vk+v+gk++++aee+Gae+L+r+++++P+tk+yF++F+ +       gsa++kahGkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfk+l+++++vvLa ++p+ +tpev+a++dk+l++va++l+akY+
+               HBA_ANSSE   1 VLSAADKGNVKTVFGKIGGHAEEYGAETLQRMFQTFPQTKTYFPHFDLQ------PGSAQIKAHGKKVAAALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKFLGHCFLVVLAIHHPSLLTPEVHASMDKFLCAVATVLTAKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
 
 >> HBA_ERIEU  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  190.0   0.3   4.5e-59   4.5e-59       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  199.8   0.1   4.5e-62   4.5e-62       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 190.0 bits;  conditional E-value: 4.5e-59
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k++v++ wgk++++  e+G+eaL r++  +P+tk+yF++f+l+      +gs++vk+hgkkv++al++av++ldd+++al++Ls+lHa+kl+vdp+nfklls++l+v+la h+p++ftp+v+a+ldkfla+va++L++kY
-               HBA_ERIEU   6 DKANVKTFWGKLGGHGGEYGGEALDRMFQAHPTTKTYFPHFDLN------PGSAQVKGHGKKVADALTTAVNNLDDVPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLALHHPADFTPAVHASLDKFLATVATVLTSKY 140
-                             89*****************************************9......******************************************************************************************9 PP
+  == domain 1  score: 199.8 bits;  conditional E-value: 4.5e-62
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLsa++k++vk+ wgk++++  e+G+eaL r+++ +P+tk+yF++F+         gsa+vk+hGkkv++al++av++ldd+ gal++Ls+lHa+kl+vdp+nfklls++l+v+La ++p++ftp+v+a+ldk+l++va++l++kY+
+               HBA_ERIEU   1 VLSATDKANVKTFWGKLGGHGGEYGGEALDRMFQAHPTTKTYFPHFDLN------PGSAQVKGHGKKVADALTTAVNNLDDVPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLALHHPADFTPAVHASLDKFLATVATVLTSKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
 
 >> HBA_PAGLA  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  189.9   0.9   4.7e-59   4.7e-59       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  198.8   0.3   9.2e-62   9.2e-62       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 189.9 bits;  conditional E-value: 4.7e-59
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k++++a+w+k+++++ e+GaeaL+r ++++P+tk+yF++f+l+      +gs++vkahgkkv++al++av hl+dl++al++Ls+lHa+kl+vdp+nfklls++l+v+la+h+p+eftp+v+ Aldkf++av+++L++kY
-               HBA_PAGLA   6 DKNNIKATWDKIGSHAGEYGAEALERTFISFPTTKTYFPHFDLS------HGSAQVKAHGKKVADALTLAVGHLEDLPNALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPAEFTPAVHSALDKFFSAVSTVLTSKY 140
-                             89******************************************......******************************************************************************************9 PP
+  == domain 1  score: 198.8 bits;  conditional E-value: 9.2e-62
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLs+++k+++ka w+k++++a e+GaeaLer ++++P+tk+yF++F+ +      +gsa+vkahGkkv++al+ av +l+dl +al++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v++aldk++++v+++l++kY+
+               HBA_PAGLA   1 VLSSADKNNIKATWDKIGSHAGEYGAEALERTFISFPTTKTYFPHFDLS------HGSAQVKAHGKKVADALTLAVGHLEDLPNALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPAEFTPAVHSALDKFFSAVSTVLTSKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
+
+>> HBA_PROLO  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  198.6   0.0   1.1e-61   1.1e-61       2     148 ..       1     141 []       1     141 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 198.6 bits;  conditional E-value: 1.1e-61
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLs ++k+++ka w+k++++a e+G+eaLer + ++P+tk+yF++F+ +       gsa+vkahGkkv++al+ av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v+a+ldk++++v+++l++kY+
+               HBA_PROLO   1 VLSPADKANIKATWDKIGGHAGEYGGEALERTFASFPTTKTYFPHFDLS------PGSAQVKAHGKKVADALTLAVGHLDDLPGALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPAEFTPAVHASLDKFFTSVSTVLTSKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
 
 >> HBA_TRIOC  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  188.0   0.6   1.8e-58   1.8e-58       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  197.4   0.4   2.4e-61   2.4e-61       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 188.0 bits;  conditional E-value: 1.8e-58
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k++v++v++k+ +++e++Gae+L+r++++yP tk+yF++f+l+      +gs+++kahgkkv++al eav+h+dd+++al++Ls+lHa+kl+vdp+nfkll+++++vv+aih+p+ +tpev+a+ldkfl+av n+L++kY
-               HBA_TRIOC   6 DKTNVKTVFTKITGHAEDYGAETLERMFITYPPTKTYFPHFDLH------HGSAQIKAHGKKVVGALIEAVNHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGQCFLVVVAIHHPSVLTPEVHASLDKFLCAVGNVLSAKY 140
-                             9*******************************************......******************************************************************************************9 PP
+  == domain 1  score: 197.4 bits;  conditional E-value: 2.4e-61
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLsa++k++vk+v++k++++ae++Gae+Ler++++yP tk+yF++F+ +      +gsa++kahGkkv+ al eav+++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+ +tpev+a+ldk+l++v n+l+akY+
+               HBA_TRIOC   1 VLSANDKTNVKTVFTKITGHAEDYGAETLERMFITYPPTKTYFPHFDLH------HGSAQIKAHGKKVVGALIEAVNHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGQCFLVVVAIHHPSVLTPEVHASLDKFLCAVGNVLSAKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
 
 >> HBAD_CHLME  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  186.8   0.9   4.3e-58   4.3e-58       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  195.0   0.5   1.3e-60   1.3e-60       3     148 ..       2     141 .]       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 186.8 bits;  conditional E-value: 4.3e-58
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k+  +++w+kv +++ee+G eaL+r++l+yP+tk+yF++f+l+      +gse+v++hgkkv++alg+avk+ld+l++al+eLs+lHa++l+vdp nfkll++++ vvla+hl+k+++pe++aA+dkfl+ava +La+kY
-              HBAD_CHLME   6 DKKLLTQLWEKVAGHQEEFGSEALQRMFLTYPQTKTYFPHFDLH------PGSEQVRGHGKKVAAALGNAVKSLDNLSQALSELSNLHAYNLRVDPANFKLLAQCFQVVLATHLGKDYSPEMHAAFDKFLSAVAAVLAEKY 140
-                             8999****************************************......******************************************************************************************9 PP
+  == domain 1  score: 195.0 bits;  conditional E-value: 1.3e-60
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             L+a++k+l++++w+kv +++ee+G+eaL+r++ +yP+tk+yF++F+ +       gs++v++hGkkv++alg+avk+ld+l++al++Ls+lHa++l+vdp nfkll++++ vvLa++++k+++pe++aa+dk+l++va++la+kY+
+              HBAD_CHLME   2 LTADDKKLLTQLWEKVAGHQEEFGSEALQRMFLTYPQTKTYFPHFDLH------PGSEQVRGHGKKVAAALGNAVKSLDNLSQALSELSNLHAYNLRVDPANFKLLAQCFQVVLATHLGKDYSPEMHAAFDKFLSAVAAVLAEKYR 141
+                             99*********************************************9......*******************************************************************************************8 PP
+
+>> HBAZ_HORSE  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  193.3   0.1   4.5e-60   4.5e-60       3     148 ..       2     141 .]       1     141 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 193.3 bits;  conditional E-value: 4.5e-60
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             L+++e+++v ++wgk++++a+++G+eaL+rl+ +yP+tk+yF++F+ +      +gs++++ahG+kv++a+g+avk++d+++gal+kLselHa+ l+vdp+nfk+ls++l+v+La+++p++ft++++aa+dk+l++v+++l++kY+
+              HBAZ_HORSE   2 LTKAERTMVVSIWGKISMQADAVGTEALQRLFSSYPQTKTYFPHFDLH------EGSPQLRAHGSKVAAAVGDAVKSIDNVAGALAKLSELHAYILRVDPVNFKFLSHCLLVTLASRLPADFTADAHAAWDKFLSIVSSVLTEKYR 141
+                             89*********************************************9......*******************************************************************************************8 PP
 
 >> HBA_COLLI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  183.7   0.4   3.9e-57   3.9e-57       2     142 .]       6     140 ..       5     140 .. 0.99
+   1 !  192.7   0.2   6.7e-60   6.7e-60       2     148 ..       1     141 []       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 183.7 bits;  conditional E-value: 3.9e-57
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +ks+v+av+ k+++++ ++G+eaL+rl+++yP+tk+yF++f+l+      +gs+++k+hgkkv++al+ea++h+dd+++al++Ls+lHa+kl+vdp+nfkll+++++vv+a h+p+ +tpev+a+ldkf+ av ++L++kY
-               HBA_COLLI   6 DKSNVKAVFAKIGGQAGDLGGEALERLFITYPQTKTYFPHFDLS------HGSAQIKGHGKKVAEALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAKY 140
-                             9*******************************************......******************************************************************************************9 PP
+  == domain 1  score: 192.7 bits;  conditional E-value: 6.7e-60
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   2 vLsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             vLsa++k++vkav++k++++a +lG+eaLerl+++yP+tk+yF++F+ +      +gsa++k+hGkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a +fp+ +tpev+a+ldk++ +v ++l+akY+
+               HBA_COLLI   1 VLSANDKSNVKAVFAKIGGQAGDLGGEALERLFITYPQTKTYFPHFDLS------HGSAQIKGHGKKVAEALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAKYR 141
+                             79**********************************************9......*******************************************************************************************8 PP
 
 >> HBBL_RANCA  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  183.0   0.2   6.5e-57   6.5e-57       1     142 []       6     145 ..       6     145 .. 0.99
+   1 !  191.2   0.2     2e-59     2e-59       4     147 ..       4     145 ..       2     146 .] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 183.0 bits;  conditional E-value: 6.5e-57
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eek+ +++vw+kv+v+++  G+eaL+rl++vyP+t+ryF++f++l+s++a+ g++kv+ahgkk+l+a+++a+++ldd+k++l++Lse+Ha++lhvdpenf+ l+evlivvl ++l+k+f+p+vq+ ++kf+a++  aL++ Y
-              HBBL_RANCA   6 EEKAVINSVWQKVDVEQD--GHEALTRLFIVYPWTQRYFSTFGDLSSPAAIAGNPKVHAHGKKILGAIDNAIHNLDDVKGTLHDLSEEHANELHVDPENFRRLGEVLIVVLGAKLGKAFSPQVQHVWEKFIAVLVDALSHSY 145
-                             699************987..************************************************************************************************************************99 PP
+  == domain 1  score: 191.2 bits;  conditional E-value: 2e-59
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   4 saeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             +aeek+ +++vw+kv+v+++  G+eaL+rl++vyP+t+ryF++F+dl+s+++++g++kv+ahGkk+l a+++a+++ldd+kg+l++Lse Ha++l+vdpenf+ l+evl+vvL ak++k+f+p+vq++++k+++++ +al++ Y
+              HBBL_RANCA   4 TAEEKAVINSVWQKVDVEQD--GHEALTRLFIVYPWTQRYFSTFGDLSSPAAIAGNPKVHAHGKKILGAIDNAIHNLDDVKGTLHDLSEEHANELHVDPENFRRLGEVLIVVLGAKLGKAFSPQVQHVWEKFIAVLVDALSHSY 145
+                             79***************876..************************************************************************************************************************** PP
 
 >> HBAD_PASMO  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  179.6   0.1     7e-56     7e-56       1     142 []       5     140 ..       5     140 .. 0.99
+   1 !  190.9   0.1   2.4e-59   2.4e-59       3     148 ..       2     141 .]       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 179.6 bits;  conditional E-value: 7e-56
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             e+k+ ++++wgk+++++ee+Ga+aL r++++yP tk+yF++f+l+      +gs+++++hgkkv++al++a+k+ld+l++al+eLs+lHa++l+vdp+nfk+ls++l v la++l+ke++pev+ A+dkf++ava++La+kY
-              HBAD_PASMO   5 EDKKLIQQIWGKLGGAEEEIGADALWRMFHSYPSTKTYFPHFDLS------QGSDQIRGHGKKVVAALSNAIKNLDNLSQALSELSNLHAYNLRVDPVNFKFLSQCLQVSLATRLGKEYSPEVHSAVDKFMSAVASVLAEKY 140
-                             69*******************************************......******************************************************************************************9 PP
-
->> HBAZ_HORSE  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  179.1   0.1     1e-55     1e-55       2     142 .]       6     140 ..       5     140 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 179.1 bits;  conditional E-value: 1e-55
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             e++ v ++wgk++++++++G eaL+rl+ +yP+tk+yF++f+l+      +gs++++ahg kv++a+g+avk++d++++ala+LselHa+ l+vdp+nfk+ls++l+v+la++lp++ft++++aA+dkfl++v+++L++kY
-              HBAZ_HORSE   6 ERTMVVSIWGKISMQADAVGTEALQRLFSSYPQTKTYFPHFDLH------EGSPQLRAHGSKVAAAVGDAVKSIDNVAGALAKLSELHAYILRVDPVNFKFLSHCLLVTLASRLPADFTADAHAAWDKFLSIVSSVLTEKY 140
-                             7899****************************************......******************************************************************************************9 PP
+  == domain 1  score: 190.9 bits;  conditional E-value: 2.4e-59
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             L+ae+k+l++++wgk+++ +ee+Ga+aL r++++yP+tk+yF++F+ +      +gs+++++hGkkv++al++a+k+ld+l++al++Ls+lHa++l+vdp+nfk+ls++l v La++++ke++pev++a+dk++++va++la+kY+
+              HBAD_PASMO   2 LTAEDKKLIQQIWGKLGGAEEEIGADALWRMFHSYPSTKTYFPHFDLS------QGSDQIRGHGKKVVAALSNAIKNLDNLSQALSELSNLHAYNLRVDPVNFKFLSQCLQVSLATRLGKEYSPEVHSAVDKFMSAVASVLAEKYR 141
+                             9**********************************************9......*******************************************************************************************8 PP
 
 >> HBB2_XENTR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  177.0   0.7   4.4e-55   4.4e-55       1     142 []       6     145 ..       6     145 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 177.0 bits;  conditional E-value: 4.4e-55
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             eek+++++vwgkv+++++  G++aL+rll+vyP+t+ryF++f++l++ +av+g+ kvkahg+kvl+a+g a++hldd+k++l+ Ls++Ha++lhvdpenfk l++vl++vla++l+++ftp+vqa ++k+ a++  aL++ Y
-              HBB2_XENTR   6 EEKATIASVWGKVDIEQD--GHDALSRLLVVYPWTQRYFSSFGNLSNVSAVSGNVKVKAHGNKVLSAVGSAIQHLDDVKSHLKGLSKSHAEDLHVDPENFKRLADVLVIVLAAKLGSAFTPQVQAVWEKLNATLVAALSHGY 145
-                             69*************987..************************************************************************************************************************99 PP
-
->> MYG_PROGU  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  175.8   1.6   1.1e-54   1.1e-54       2     142 .]       6     146 ..       5     146 .. 1.00
-
-  Alignments for each domain:
-  == domain 1  score: 175.8 bits;  conditional E-value: 1.1e-54
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             e++ v +vwgkve+d +++G+e+L+rl++ +Pet ++Fdkfk+lk +d++ +se++k+hg++vltalg ++k++++++++la+L+++Ha+k+++++++++++se++i+vl++++p++f++++q+A++k+l++++n++a+kY
-               MYG_PROGU   6 EWQLVLNVWGKVEGDLSGHGQEVLIRLFKGHPETLEKFDKFKHLKAEDEMRASEELKKHGTTVLTALGGILKKKGQHAAELAPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDIAAKY 146
-                             8*******************************************************************************************************************************************9 PP
-
->> MYG_LYCPI  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  174.4   5.3   2.9e-54   2.9e-54       2     142 .]       6     146 ..       5     146 .. 1.00
-
-  Alignments for each domain:
-  == domain 1  score: 174.4 bits;  conditional E-value: 2.9e-54
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             e++ v ++wgkve+d +++G+e+L+rl++ +Pet ++Fdkfk+lk++d++kgse++k+hg++vltalg ++k++++++++l++L+++Ha+k+++++++++++s+++i+vl+++++++f+++++aA++k+l++++n++a+kY
-               MYG_LYCPI   6 EWQIVLNIWGKVETDLAGHGQEVLIRLFKNHPETLDKFDKFKHLKTEDEMKGSEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPVKYLEFISDAIIQVLQNKHSGDFHADTEAAMKKALELFRNDIAAKY 146
-                             89******************************************************************************************************************************************9 PP
-
->> MYG_MOUSE  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  172.4   1.6   1.2e-53   1.2e-53       2     142 .]       6     146 ..       5     146 .. 1.00
+   1 !  188.6   0.6   1.3e-58   1.3e-58       4     147 ..       4     145 ..       2     146 .] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 172.4 bits;  conditional E-value: 1.2e-53
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             e++ v +vwgkve+d +++G+e+L+ l++++Pet ++Fdkfk+lks++++kgse++k+hg +vltalg+++k+++++++++++L+++Ha+k+++++++++++se++i vl+++++++f++++q+A++k+l++++n++a+kY
-               MYG_MOUSE   6 EWQLVLNVWGKVEADLAGHGQEVLIGLFKTHPETLDKFDKFKNLKSEEDMKGSEDLKKHGCTVLTALGTILKKKGQHAAEIQPLAQSHATKHKIPVKYLEFISEIIIEVLKKRHSGDFGADAQGAMSKALELFRNDIAAKY 146
-                             8*******************************************************************************************************************************************9 PP
-
->> MYG_SAISC  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  172.2   4.3   1.4e-53   1.4e-53       2     142 .]       6     146 ..       5     146 .. 1.00
-
-  Alignments for each domain:
-  == domain 1  score: 172.2 bits;  conditional E-value: 1.4e-53
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             e++ v ++wgkve+d   +G+e+L+ l++ +Pet ++Fdkfk+lks+d++k+se++k+hg++vltalg ++k++++++++l++L+++Ha+k+++++++++l+s+++++vl++++p++f++++q+A++k+l++++n++a+kY
-               MYG_SAISC   6 EWQLVLNIWGKVEADIPSHGQEVLISLFKGHPETLEKFDKFKHLKSEDEMKASEELKKHGTTVLTALGGILKKKGQHEAELKPLAQSHATKHKIPVKYLELISDAIVHVLQKKHPGDFGADAQGAMKKALELFRNDMAAKY 146
-                             8*******************************************************************************************************************************************9 PP
-
->> MYG_HORSE  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  171.9   4.2   1.7e-53   1.7e-53       2     142 .]       6     146 ..       5     146 .. 1.00
-
-  Alignments for each domain:
-  == domain 1  score: 171.9 bits;  conditional E-value: 1.7e-53
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             e+++v +vwgkve+d +++G+e+L+rl++ +Pet ++Fdkfk+lk+++++k+se++k+hg+ vltalg ++k++++++++l++L+++Ha+k++++ ++++++s+++i+vl++++p++f++++q+A+ k+l++++n++a+kY
-               MYG_HORSE   6 EWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSKHPGNFGADAQGAMTKALELFRNDIAAKY 146
-                             8*******************************************************************************************************************************************9 PP
-
->> MYG_ESCGI  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  170.2   5.7   5.6e-53   5.6e-53       2     142 .]       6     146 ..       5     146 .. 1.00
-
-  Alignments for each domain:
-  == domain 1  score: 170.2 bits;  conditional E-value: 5.6e-53
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             e++ v ++w kve+d +++G+++L+rl++ +Pet ++Fdkfk+lk+++++k+se++k+hg++vltalg ++k++++++++l++L+++Ha+k++++ ++++++s+++i+vl++++p++f++++qaA++k+l+++++++a+kY
-               MYG_ESCGI   6 EWQLVLNIWAKVEADVAGHGQDILIRLFKGHPETLEKFDKFKHLKTEAEMKASEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSRHPGDFGADAQAAMNKALELFRKDIAAKY 146
-                             8*******************************************************************************************************************************************9 PP
+  == domain 1  score: 188.6 bits;  conditional E-value: 1.3e-58
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   4 saeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             +aeek+++++vwgkv+++++  G++aL+rllvvyP+t+ryF++F++l++ ++v+g+ kvkahG+kvl+a+g+a+++ldd+k++lk Ls++Ha++l+vdpenfk l++vlv+vLaak++++ftp+vqa+++kl +++ +al++ Y
+              HBB2_XENTR   4 TAEEKATIASVWGKVDIEQD--GHDALSRLLVVYPWTQRYFSSFGNLSNVSAVSGNVKVKAHGNKVLSAVGSAIQHLDDVKSHLKGLSKSHAEDLHVDPENFKRLADVLVIVLAAKLGSAFTPQVQAVWEKLNATLVAALSHGY 145
+                             79**************9876..*************************************************************************************************************************9 PP
 
 >> HBA4_SALIR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  167.4   0.1   4.2e-52   4.2e-52       2     142 .]       6     141 ..       5     141 .. 0.99
+   1 !  179.9   0.1   5.9e-56   5.9e-56       3     148 ..       2     142 .]       1     142 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 167.4 bits;  conditional E-value: 4.2e-52
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             +k++v+a+wgk+  +++e+G++aL+r+l+vyP+tk yF+++         +gs+ vk+hg +++++++++v h+ddl + l++LselHa+kl+vdp+nfk+l++ livv+a+ +p+eftpe + ++dkfl+++a+aLa+kY
-              HBA4_SALIR   6 DKANVKAIWGKILPKSDEIGEQALSRMLVVYPQTKAYFSHWASV-----APGSAPVKKHGITIMNQIDDCVGHMDDLFGFLTKLSELHATKLRVDPTNFKILAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALALAEKY 141
-                             8******************************************9.....9******************************************************************************************9 PP
+  == domain 1  score: 179.9 bits;  conditional E-value: 5.9e-56
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYk 148
+                             Lsa++k++vka+wgk+  +++e+G++aL+r+lvvyP+tk yF+++ ++       gsa vk+hG +++++++++v ++ddl g l+kLselHatkl+vdp+nfk+l++ l+vv+aa fp+eftpe++ ++dk+l+++a ala+kY+
+              HBA4_SALIR   2 LSAKDKANVKAIWGKILPKSDEIGEQALSRMLVVYPQTKAYFSHWASV-----APGSAPVKKHGITIMNQIDDCVGHMDDLFGFLTKLSELHATKLRVDPTNFKILAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALALAEKYR 142
+                             9**********************************************9.....9*******************************************************************************************8 PP
+
+>> MYG_MUSAN  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  174.5   0.4   2.8e-54   2.8e-54       7     154 .]       2     148 .]       1     148 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 174.5 bits;  conditional E-value: 2.8e-54
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   7 ekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakYkelgfqg 154
+                             ++++v++vw+ ve+d++++G+++L rl+++yPe++++F+kFk+ ks  e+k++a++ka++++vl+alg++vkk++++++ +k+L+++H+t++k++p++f+ ++++ v vL++++p+e++++vqaa++ ++++++++++++Yk+++fqg
+               MYG_MUSAN   2 DWEKVNSVWSAVESDLTAIGQNILLRLFEQYPESQNHFPKFKN-KSLGELKDTADIKAQADTVLSALGNIVKKKGSHSQPVKALAATHITTHKIPPHYFTKITTIAVDVLSEMYPSEMNAQVQAAFSGAFKIICSDIEKEYKAANFQG 148
+                             8******************************************.5******************************************************************************************************8 PP
 
 >> HBB2_TRICR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  160.5   0.0   5.8e-50   5.8e-50       1     142 []       6     145 .]       6     145 .] 0.99
+   1 !  168.3   0.0   2.2e-52   2.2e-52       3     147 ..       3     145 .]       1     145 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 160.5 bits;  conditional E-value: 5.8e-50
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   1 eekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             e+++e++a++gkv+vd   +G+++L+rl++v+P+++ryF++f++l+s+da+++++kv ahg+kv+++++ea+khld+l++ +a+Ls +H  k++vdpenfkl+s ++iv+la +l+++f++++q A++k++++v++aL + Y
-              HBB2_TRICR   6 EDRKEIAAILGKVNVD--SLGGQCLARLIVVNPWSRRYFHDFGDLSSCDAICRNPKVLAHGAKVMRSIVEATKHLDNLREYYADLSVTHSLKFYVDPENFKLFSGIVIVCLALTLQTDFSCHKQLAFEKLMKGVSHALGHGY 145
-                             699************8..69************************************************************************************************************************98 PP
-
->> MYG_MUSAN  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  145.5   0.4   2.3e-45   2.3e-45       2     142 .]       2     141 ..       1     141 [. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 145.5 bits;  conditional E-value: 2.3e-45
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02185|MYG_PHYCD-i2   2 ekseveavwgkvevdkeeaGaeaLgrlllvyPetkryFdkfkllkskdavkgsekvkahgkkvltalgeavkhlddlkkalaeLselHaaklhvdpenfkllsevlivvlaihlpkeftpevqaAldkflaavanaLarkY 142
-                             ++++v++vw+ ve+d +++G+++L rl+ +yPe++++F+kfk+ ks  ++k+++++ka+ ++vl+alg++vk+++++++ +++L+ +H+++++++p++f+ ++++ + vl++++p+e++++vqaA++ ++++++++++++Y
-               MYG_MUSAN   2 DWEKVNSVWSAVESDLTAIGQNILLRLFEQYPESQNHFPKFKN-KSLGELKDTADIKAQADTVLSALGNIVKKKGSHSQPVKALAATHITTHKIPPHYFTKITTIAVDVLSEMYPSEMNAQVQAAFSGAFKIICSDIEKEY 141
-                             8******************************************.5*********************************************************************************************999 PP
+  == domain 1  score: 168.3 bits;  conditional E-value: 2.2e-52
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02185|MYG_PHYCD-i2   3 LsaeekqlvkavwgkvevdaeelGaeaLerllvvyPetkryFdkFkdlksedevkgsakvkahGkkvltalgeavkklddlkgalkkLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllelvanalaakY 147
+                             L+ae++++++a++gkv+vd  +lG+++L+rl+vv+P+++ryF++F+dl+s+d++++++kv ahG+kv++++ ea+k+ld+l++ +++Ls +H+ k+ vdpenfkl+s +++v+La +++++f+++ q a++kl+++v++al + Y
+              HBB2_TRICR   3 LTAEDRKEIAAILGKVNVD--SLGGQCLARLIVVNPWSRRYFHDFGDLSSCDAICRNPKVLAHGAKVMRSIVEATKHLDNLREYYADLSVTHSLKFYVDPENFKLFSGIVIVCLALTLQTDFSCHKQLAFEKLMKGVSHALGHGY 145
+                             9*****************8..69************************************************************************************************************************99 PP
 
 
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (142 nodes)
-Target sequences:                           45  (6519 residues searched)
+Query model(s):                            1  (154 nodes)
+Target sequences:                         45  (6519 residues searched)
 Passed MSV filter:                        45  (1); expected 0.9 (0.02)
 Passed bias filter:                       45  (1); expected 0.9 (0.02)
 Passed Vit filter:                        45  (1); expected 0.0 (0.001)
 Passed Fwd filter:                        45  (1); expected 0.0 (1e-05)
 Initial search space (Z):                 45  [actual number of targets]
 Domain search space  (domZ):              45  [number of targets reported over threshold]
-# CPU time: 0.35u 0.00s 00:00:00.35 Elapsed: 00:00:00.83
-# Mc/sec: 1.12
+# CPU time: 0.19u 0.00s 00:00:00.19 Elapsed: 00:00:00.18
+# Mc/sec: 5.41
 
 @@ New targets included:   0
 @@ New alignment includes: 46 subseqs (was 46), including original query
@@ -2542,16 +2541,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (147 nodes)
-Target sequences:                           45  (6519 residues searched)
+Query model(s):                            1  (147 nodes)
+Target sequences:                         45  (6519 residues searched)
 Passed MSV filter:                        45  (1); expected 0.9 (0.02)
 Passed bias filter:                       45  (1); expected 0.9 (0.02)
 Passed Vit filter:                        45  (1); expected 0.0 (0.001)
 Passed Fwd filter:                        45  (1); expected 0.0 (1e-05)
 Initial search space (Z):                 45  [actual number of targets]
 Domain search space  (domZ):              45  [number of targets reported over threshold]
-# CPU time: 0.06u 0.00s 00:00:00.06 Elapsed: 00:00:00.13
-# Mc/sec: 7.37
+# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
+# Mc/sec: 31.81
 
 @@ New targets included:   45
 @@ New alignment includes: 46 subseqs (was 1), including original query
@@ -2560,660 +2559,660 @@
 @@
 @@ Round:                  2
 @@ Included in MSA:        46 subsequences (query + 45 subseqs from 45 targets)
-@@ Model size:             143 positions
+@@ Model size:             147 positions
 @@
 
 Scores for complete sequences (score includes all domains):
    --- full sequence ---   --- best 1 domain ---    -#dom-
     E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
     ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
-    1.4e-71  230.4   0.0    1.5e-71  230.3   0.0    1.0  1  HBB_MANSP   
-    5.9e-71  228.4   0.1    6.6e-71  228.2   0.1    1.0  1  HBB_URSMA   
-    5.8e-70  225.2   0.3    6.4e-70  225.0   0.3    1.0  1  HBB_RABIT   
-      2e-69  223.4   0.0    2.2e-69  223.3   0.0    1.0  1  HBB_SUNMU   
-    2.4e-69  223.1   0.1    2.7e-69  223.0   0.1    1.0  1  HBB_CALAR   
-    3.4e-69  222.7   0.1    3.8e-69  222.5   0.1    1.0  1  HBB_EQUHE   
-    4.2e-69  222.4   0.0    4.7e-69  222.2   0.0    1.0  1  HBB_COLLI   
-    7.3e-69  221.6   0.1    8.1e-69  221.4   0.1    1.0  1  HBB_TACAC   
-    1.3e-68  220.8   0.1    1.5e-68  220.6   0.1    1.0  1  HBE_PONPY   
-      3e-68  219.6   0.4    3.3e-68  219.5   0.4    1.0  1  HBB_SPECI   
-    5.3e-68  218.8   0.2    5.9e-68  218.7   0.2    1.0  1  HBB_SPETO   
-    1.3e-67  217.5   0.0    1.5e-67  217.3   0.0    1.0  1  HBB_ORNAN   
-    1.4e-67  217.5   0.0    1.5e-67  217.3   0.0    1.0  1  HBB_TRIIN   
-    2.5e-67  216.6   0.0    2.8e-67  216.5   0.0    1.0  1  HBB_LARRI   
-    6.5e-66  212.0   0.0    7.2e-66  211.9   0.0    1.0  1  HBB_TUPGL   
-      6e-65  208.9   0.0    6.6e-65  208.8   0.0    1.0  1  HBB1_VAREX  
-    1.9e-62  200.8   0.3    2.1e-62  200.6   0.3    1.0  1  HBA_MESAU   
-    1.9e-61  197.6   0.7    2.1e-61  197.4   0.7    1.0  1  HBA_PONPY   
-    2.7e-61  197.0   0.1    3.1e-61  196.9   0.1    1.0  1  HBBL_RANCA  
-    3.6e-61  196.6   0.3    4.1e-61  196.5   0.3    1.0  1  HBA_MACFA   
-    5.2e-61  196.1   0.2    5.8e-61  196.0   0.2    1.0  1  HBA_MACSI   
-      9e-61  195.4   0.1      1e-60  195.2   0.1    1.0  1  HBA_AILME   
-    1.6e-60  194.6   0.4    1.8e-60  194.4   0.4    1.0  1  HBB2_XENTR  
-    2.7e-60  193.8   0.5      3e-60  193.7   0.5    1.0  1  HBA2_GALCR  
-      3e-60  193.7   0.4    3.3e-60  193.5   0.4    1.0  1  HBA_FRAPO   
-      3e-60  193.7   0.4    3.4e-60  193.5   0.4    1.0  1  HBA_PHACO   
-    3.2e-60  193.6   0.3    3.5e-60  193.4   0.3    1.0  1  HBA2_BOSMU  
-      1e-59  191.9   0.1    1.1e-59  191.8   0.1    1.0  1  HBA_ERIEU   
-    1.4e-59  191.5   0.0    1.5e-59  191.4   0.0    1.0  1  HBA_PROLO   
-    1.6e-59  191.3   0.4    1.8e-59  191.1   0.4    1.0  1  HBA_ANSSE   
-    1.7e-59  191.2   0.5    1.9e-59  191.1   0.5    1.0  1  HBA_PAGLA   
-    1.1e-58  188.6   0.5    1.2e-58  188.4   0.5    1.0  1  HBA_TRIOC   
-    2.9e-58  187.2   0.6    3.2e-58  187.1   0.6    1.0  1  HBAD_CHLME  
-    3.4e-58  187.0   0.1    3.8e-58  186.9   0.1    1.0  1  HBAZ_HORSE  
-    6.7e-58  186.1   0.2    7.4e-58  185.9   0.2    1.0  1  HBA_COLLI   
-    8.9e-58  185.7   0.1    9.9e-58  185.5   0.1    1.0  1  HBAD_PASMO  
-    1.1e-56  182.1   1.9    1.3e-56  181.9   1.9    1.0  1  MYG_LYCPI   
-    1.1e-56  182.1   1.1    1.3e-56  181.9   1.1    1.0  1  MYG_SAISC   
-    2.5e-56  181.0   1.7    2.8e-56  180.8   1.7    1.0  1  MYG_ESCGI   
-    3.2e-56  180.6   0.2    3.6e-56  180.4   0.2    1.0  1  MYG_PROGU   
-    9.5e-56  179.1   1.0    1.1e-55  178.9   1.0    1.0  1  MYG_HORSE   
-    1.8e-55  178.2   0.3      2e-55  178.0   0.3    1.0  1  MYG_MOUSE   
-    3.4e-55  177.3   0.1    3.8e-55  177.1   0.1    1.0  1  HBA4_SALIR  
-    1.8e-53  171.7   0.0      2e-53  171.6   0.0    1.0  1  HBB2_TRICR  
-      1e-44  143.3   0.3    1.1e-44  143.2   0.3    1.0  1  MYG_MUSAN   
+    3.6e-74  238.9   0.1      4e-74  238.8   0.1    1.0  1  HBB_MANSP   
+    1.7e-73  236.7   0.3    1.9e-73  236.6   0.3    1.0  1  HBB_URSMA   
+    2.2e-72  233.1   0.8    2.4e-72  233.0   0.8    1.0  1  HBB_RABIT   
+    5.4e-72  231.8   0.1      6e-72  231.7   0.1    1.0  1  HBB_SUNMU   
+      7e-72  231.5   0.2    7.7e-72  231.3   0.2    1.0  1  HBB_CALAR   
+    9.6e-72  231.0   0.0    1.1e-71  230.9   0.0    1.0  1  HBB_COLLI   
+    2.5e-71  229.7   0.4    2.8e-71  229.6   0.4    1.0  1  HBB_TACAC   
+    4.8e-71  228.8   0.4    5.3e-71  228.6   0.4    1.0  1  HBE_PONPY   
+    5.1e-71  228.7   0.2    5.7e-71  228.5   0.2    1.0  1  HBB_EQUHE   
+    1.3e-70  227.3   1.0    1.5e-70  227.2   1.0    1.0  1  HBB_SPECI   
+      2e-70  226.8   0.6    2.2e-70  226.6   0.6    1.0  1  HBB_SPETO   
+    3.7e-70  225.9   0.1    4.1e-70  225.8   0.1    1.0  1  HBB_TRIIN   
+    4.1e-70  225.7   0.0    4.6e-70  225.6   0.0    1.0  1  HBB_ORNAN   
+    5.7e-70  225.3   0.0    6.4e-70  225.1   0.0    1.0  1  HBB_LARRI   
+    1.8e-68  220.5   0.0    1.9e-68  220.3   0.0    1.0  1  HBB_TUPGL   
+    1.5e-67  217.4   0.1    1.7e-67  217.3   0.1    1.0  1  HBB1_VAREX  
+    7.8e-64  205.4   0.3    8.7e-64  205.2   0.3    1.0  1  HBBL_RANCA  
+    4.5e-63  202.9   0.3      5e-63  202.8   0.3    1.0  1  HBA_MESAU   
+      2e-62  200.8   0.8    2.3e-62  200.6   0.8    1.0  1  HBB2_XENTR  
+    4.6e-62  199.6   0.7      5e-62  199.5   0.7    1.0  1  HBA_PONPY   
+    8.7e-62  198.7   0.3    9.6e-62  198.6   0.3    1.0  1  HBA_MACFA   
+    1.3e-61  198.2   0.3    1.4e-61  198.1   0.3    1.0  1  HBA_MACSI   
+    2.1e-61  197.5   0.1    2.4e-61  197.3   0.1    1.0  1  HBA_AILME   
+    6.6e-61  195.9   0.6    7.3e-61  195.7   0.6    1.0  1  HBA2_GALCR  
+    7.1e-61  195.8   0.4    7.8e-61  195.7   0.4    1.0  1  HBA_FRAPO   
+    7.3e-61  195.7   0.4      8e-61  195.6   0.4    1.0  1  HBA_PHACO   
+    7.6e-61  195.7   0.4    8.3e-61  195.6   0.4    1.0  1  HBA2_BOSMU  
+    2.4e-60  194.0   0.1    2.7e-60  193.9   0.1    1.0  1  HBA_ERIEU   
+    3.3e-60  193.6   0.0    3.6e-60  193.5   0.0    1.0  1  HBA_PROLO   
+    3.9e-60  193.4   0.4    4.3e-60  193.2   0.4    1.0  1  HBA_ANSSE   
+    4.1e-60  193.3   0.5    4.5e-60  193.2   0.5    1.0  1  HBA_PAGLA   
+    2.7e-59  190.7   0.5    2.9e-59  190.5   0.5    1.0  1  HBA_TRIOC   
+    6.3e-59  189.4   0.5      7e-59  189.3   0.5    1.0  1  HBAD_CHLME  
+    7.5e-59  189.2   0.1    8.2e-59  189.1   0.1    1.0  1  HBAZ_HORSE  
+    1.6e-58  188.1   0.2    1.8e-58  188.0   0.2    1.0  1  HBA_COLLI   
+      2e-58  187.8   0.1    2.2e-58  187.7   0.1    1.0  1  HBAD_PASMO  
+    2.9e-57  184.1   1.0    3.2e-57  183.9   1.0    1.0  1  MYG_SAISC   
+      3e-57  184.0   1.9    3.3e-57  183.9   1.9    1.0  1  MYG_LYCPI   
+    8.3e-57  182.6   0.2    9.2e-57  182.4   0.2    1.0  1  MYG_PROGU   
+    8.8e-57  182.5   2.3    9.7e-57  182.4   2.3    1.0  1  MYG_ESCGI   
+    2.5e-56  181.0   1.0    2.7e-56  180.9   1.0    1.0  1  MYG_HORSE   
+    4.7e-56  180.1   0.3    5.2e-56  180.0   0.3    1.0  1  MYG_MOUSE   
+    7.5e-56  179.5   0.1    8.3e-56  179.3   0.1    1.0  1  HBA4_SALIR  
+    2.7e-55  177.7   0.0      3e-55  177.5   0.0    1.0  1  HBB2_TRICR  
+    4.6e-45  144.5   0.3    5.1e-45  144.3   0.3    1.0  1  MYG_MUSAN   
 
 
 Domain annotation for each sequence (and alignments):
 >> HBB_MANSP  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  230.3   0.0   1.5e-71   1.5e-71       1     143 []       3     145 ..       3     145 .. 0.99
+   1 !  238.8   0.1     4e-74     4e-74       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 230.3 bits;  conditional E-value: 1.5e-71
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             l++eek++v+++wgkv++devG+eaL rllvvyP+t+r+Fd+F+dlss+dav+g++kvkahgkkvl a+++++++ld+lkg++a+LselH++kl+vdpenfkll++vlv+vLa++f+keftp+vqaa++k++a+vanala+kY
-               HBB_MANSP   3 LTPEEKTAVTTLWGKVNVDEVGGEALGRLLVVYPWTQRFFDSFGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLNHLDNLKGTFAQLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
-                             699*******************************************************************************************************************************************9 PP
+  == domain 1  score: 238.8 bits;  conditional E-value: 4e-74
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vhl++eek++v+++wgkv++devG+eaL rllvvyP+t+r+Fd+F+dlss+dav+g++kvkahGkkvl a+++++++ld+lkg++a+LselH++kl+vdpenfkll++vlv+vLa++f+keftp+vqaa++k++a+vanala+kYh
+               HBB_MANSP   1 VHLTPEEKTAVTTLWGKVNVDEVGGEALGRLLVVYPWTQRFFDSFGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLNHLDNLKGTFAQLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBB_URSMA  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  228.2   0.1   6.6e-71   6.6e-71       1     143 []       3     145 ..       3     145 .. 0.99
+   1 !  236.6   0.3   1.9e-73   1.9e-73       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 228.2 bits;  conditional E-value: 6.6e-71
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             l+ eek+lv+ +wgkv++devG+eaL rllvvyP+t+r+Fd+F+dlss+da+++++kvkahgkkvl+++++++k+ld+lkg++akLselH++kl+vdpenfkll++vlv+vLa++f+keftp+vqaa++k++a+vanala+kY
-               HBB_URSMA   3 LTGEEKSLVTGLWGKVNVDEVGGEALGRLLVVYPWTQRFFDSFGDLSSADAIMNNPKVKAHGKKVLNSFSDGLKNLDNLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
-                             689*******************************************************************************************************************************************9 PP
+  == domain 1  score: 236.6 bits;  conditional E-value: 1.9e-73
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vhl+ eek+lv+ +wgkv++devG+eaL rllvvyP+t+r+Fd+F+dlss+da+++++kvkahGkkvl+++++++k+ld+lkg++akLselH++kl+vdpenfkll++vlv+vLa++f+keftp+vqaa++k++a+vanala+kYh
+               HBB_URSMA   1 VHLTGEEKSLVTGLWGKVNVDEVGGEALGRLLVVYPWTQRFFDSFGDLSSADAIMNNPKVKAHGKKVLNSFSDGLKNLDNLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBB_RABIT  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  225.0   0.3   6.4e-70   6.4e-70       1     143 []       3     145 ..       3     145 .. 0.99
+   1 !  233.0   0.8   2.4e-72   2.4e-72       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 225.0 bits;  conditional E-value: 6.4e-70
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+eek++v+a+wgkv+++evG+eaL rllvvyP+t+r+F++F+dlss++av++++kvkahgkkvl+a++e++++ld+lkg++akLselH++kl+vdpenf+ll++vlv+vL+++f+keftp+vqaa++k++a+vanala+kY
-               HBB_RABIT   3 LSSEEKSAVTALWGKVNVEEVGGEALGRLLVVYPWTQRFFESFGDLSSANAVMNNPKVKAHGKKVLAAFSEGLSHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVIVLSHHFGKEFTPQVQAAYQKVVAGVANALAHKY 145
-                             689*******************************************************************************************************************************************9 PP
+  == domain 1  score: 233.0 bits;  conditional E-value: 2.4e-72
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vhls+eek++v+a+wgkv+++evG+eaL rllvvyP+t+r+F++F+dlss++av++++kvkahGkkvl+a++e++++ld+lkg++akLselH++kl+vdpenf+ll++vlv+vL+++f+keftp+vqaa++k++a+vanala+kYh
+               HBB_RABIT   1 VHLSSEEKSAVTALWGKVNVEEVGGEALGRLLVVYPWTQRFFESFGDLSSANAVMNNPKVKAHGKKVLAAFSEGLSHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVIVLSHHFGKEFTPQVQAAYQKVVAGVANALAHKYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBB_SUNMU  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  223.3   0.0   2.2e-69   2.2e-69       1     143 []       3     145 ..       3     145 .. 0.99
+   1 !  231.7   0.1     6e-72     6e-72       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 223.3 bits;  conditional E-value: 2.2e-69
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls eeka v+ +wgkv++devGaeaL rllvvyP+t+r+Fd+F+dlss++av+g++kvkahgkkvl++lge+v +ld+lkg++akLselH++kl+vdpenf+ll++vlvvvLa+kf+keftp vqaa++k++a+vanala+kY
-               HBB_SUNMU   3 LSGEEKACVTGLWGKVNEDEVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNPKVKAHGKKVLHSLGEGVANLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVVVLASKFGKEFTPPVQAAFQKVVAGVANALAHKY 145
-                             689*******************************************************************************************************************************************9 PP
+  == domain 1  score: 231.7 bits;  conditional E-value: 6e-72
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vhls eeka v+ +wgkv++devGaeaL rllvvyP+t+r+Fd+F+dlss++av+g++kvkahGkkvl++lge+v +ld+lkg++akLselH++kl+vdpenf+ll++vlvvvLa+kf+keftp vqaa++k++a+vanala+kYh
+               HBB_SUNMU   1 VHLSGEEKACVTGLWGKVNEDEVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNPKVKAHGKKVLHSLGEGVANLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVVVLASKFGKEFTPPVQAAFQKVVAGVANALAHKYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBB_CALAR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  223.0   0.1   2.7e-69   2.7e-69       1     143 []       3     145 ..       3     145 .. 0.99
+   1 !  231.3   0.2   7.7e-72   7.7e-72       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 223.0 bits;  conditional E-value: 2.7e-69
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             l+ eek++v+a+wgkv++devG+eaL rllvvyP+t+r+F++F+dls++dav++++kvkahgkkvl a+++++++ld+lkg++a+LselH++kl+vdpenf+ll++vlv+vLa++f+keftp vqaa++k++a+vanala+kY
-               HBB_CALAR   3 LTGEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMNNPKVKAHGKKVLGAFSDGLTHLDNLKGTFAHLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPVVQAAYQKVVAGVANALAHKY 145
-                             689*******************************************************************************************************************************************9 PP
-
->> HBB_EQUHE  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  222.5   0.1   3.8e-69   3.8e-69       1     143 []       3     145 ..       3     145 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 222.5 bits;  conditional E-value: 3.8e-69
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls eeka+v a+w+kv+++evG+eaL rllvvyP+t+r+Fd+F+dls+++av+g++kvkahgkkvl+++ge+v++ld+lkg++a+LselH++kl+vdpenf+ll++vlvvvLa++f+k+ftpe qa+++k++a+vanala+kY
-               HBB_EQUHE   3 LSGEEKAAVLALWDKVNEEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPAAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAQLSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKY 145
-                             689*******************************************************************************************************************************************9 PP
+  == domain 1  score: 231.3 bits;  conditional E-value: 7.7e-72
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vhl+ eek++v+a+wgkv++devG+eaL rllvvyP+t+r+F++F+dls++dav++++kvkahGkkvl a+++++++ld+lkg++a+LselH++kl+vdpenf+ll++vlv+vLa++f+keftp vqaa++k++a+vanala+kYh
+               HBB_CALAR   1 VHLTGEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMNNPKVKAHGKKVLGAFSDGLTHLDNLKGTFAHLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPVVQAAYQKVVAGVANALAHKYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBB_COLLI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  222.2   0.0   4.7e-69   4.7e-69       1     143 []       3     145 ..       3     145 .. 1.00
+   1 !  230.9   0.0   1.1e-71   1.1e-71       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 222.2 bits;  conditional E-value: 4.7e-69
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             +saeek+l++++wgkv++ ++GaeaL+rll+vyP+t+r+F++F++lss++a++g+++vkahgkkvlt++g+avk+ld++kg++a+LselH++kl+vdpenf+ll+++lv++Laa+f+k+ftpe+qaa++kl+++va+ala+kY
-               HBB_COLLI   3 WSAEEKQLITSIWGKVNVADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAHGKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARKY 145
-                             79********************************************************************************************************************************************9 PP
+  == domain 1  score: 230.9 bits;  conditional E-value: 1.1e-71
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vh+saeek+l++++wgkv++ ++GaeaL+rll+vyP+t+r+F++F++lss++a++g+++vkahGkkvlt++g+avk+ld++kg++a+LselH++kl+vdpenf+ll+++lv++Laa+f+k+ftpe+qaa++kl+++va+ala+kYh
+               HBB_COLLI   1 VHWSAEEKQLITSIWGKVNVADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAHGKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARKYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBB_TACAC  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  221.4   0.1   8.1e-69   8.1e-69       1     143 []       3     145 ..       3     145 .. 0.99
+   1 !  229.6   0.4   2.8e-71   2.8e-71       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 221.4 bits;  conditional E-value: 8.1e-69
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls +ek++v+++wg+v+++e+G+eaL rllvvyP+t+r+F++F+dlss+dav+g+akvkahg+kvlt++g+a+k+ld+lkg++akLselH++kl+vdpenf+ l++vlvvvLa++f+keftpe+qaa++kl+++v++ala+kY
-               HBB_TACAC   3 LSGSEKTAVTNLWGHVNVNELGGEALGRLLVVYPWTQRFFESFGDLSSADAVMGNAKVKAHGAKVLTSFGDALKNLDNLKGTFAKLSELHCDKLHVDPENFNRLGNVLVVVLARHFSKEFTPEAQAAWQKLVSGVSHALAHKY 145
-                             6889******************************************************************************************************************************************9 PP
+  == domain 1  score: 229.6 bits;  conditional E-value: 2.8e-71
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vhls +ek++v+++wg+v+++e+G+eaL rllvvyP+t+r+F++F+dlss+dav+g+akvkahG+kvlt++g+a+k+ld+lkg++akLselH++kl+vdpenf+ l++vlvvvLa++f+keftpe+qaa++kl+++v++ala+kYh
+               HBB_TACAC   1 VHLSGSEKTAVTNLWGHVNVNELGGEALGRLLVVYPWTQRFFESFGDLSSADAVMGNAKVKAHGAKVLTSFGDALKNLDNLKGTFAKLSELHCDKLHVDPENFNRLGNVLVVVLARHFSKEFTPEAQAAWQKLVSGVSHALAHKYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBE_PONPY  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  220.6   0.1   1.5e-68   1.5e-68       1     143 []       3     145 ..       3     145 .. 0.99
+   1 !  228.6   0.4   5.3e-71   5.3e-71       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 220.6 bits;  conditional E-value: 1.5e-68
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ++aeeka+v+++w+k++++e+G+eaL rllvvyP+t+r+Fd+F++lss++a+ g++kvkahgkkvlt++g+a+k++d+lk+++akLselH++kl+vdpenfkll++v+v++La++f+keftpevqaa++kl++ava ala+kY
-               HBE_PONPY   3 FTAEEKAAVTSLWSKMNVEEAGGEALGRLLVVYPWTQRFFDSFGNLSSPSAILGNPKVKAHGKKVLTSFGDAIKNMDNLKTTFAKLSELHCDKLHVDPENFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKY 145
-                             589*******************************************************************************************************************************************9 PP
+  == domain 1  score: 228.6 bits;  conditional E-value: 5.3e-71
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vh++aeeka+v+++w+k++++e+G+eaL rllvvyP+t+r+Fd+F++lss++a+ g++kvkahGkkvlt++g+a+k++d+lk+++akLselH++kl+vdpenfkll++v+v++La++f+keftpevqaa++kl++ava ala+kYh
+               HBE_PONPY   1 VHFTAEEKAAVTSLWSKMNVEEAGGEALGRLLVVYPWTQRFFDSFGNLSSPSAILGNPKVKAHGKKVLTSFGDAIKNMDNLKTTFAKLSELHCDKLHVDPENFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKYH 146
+                             8************************************************************************************************************************************************8 PP
+
+>> HBB_EQUHE  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  228.5   0.2   5.7e-71   5.7e-71       2     147 .]       1     146 []       1     146 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 228.5 bits;  conditional E-value: 5.7e-71
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             v+ls eeka+v a+w+kv+++evG+eaL rllvvyP+t+r+Fd+F+dls+++av+g++kvkahGkkvl+++ge+v++ld+lkg++a+LselH++kl+vdpenf+ll++vlvvvLa++f+k+ftpe qa+++k++a+vanala+kYh
+               HBB_EQUHE   1 VQLSGEEKAAVLALWDKVNEEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPAAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAQLSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH 146
+                             789**********************************************************************************************************************************************8 PP
 
 >> HBB_SPECI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  219.5   0.4   3.3e-68   3.3e-68       1     143 []       3     145 ..       3     145 .. 0.99
+   1 !  227.2   1.0   1.5e-70   1.5e-70       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 219.5 bits;  conditional E-value: 3.3e-68
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+ ek++++++wgkv+a evGaeaL rllvvyP+t+r+Fd+F+dlss++av+g+akvkahgkkv++++++++k+ld+lkg++a+LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k++a+vanala+kY
-               HBB_SPECI   3 LSDGEKNAISTAWGKVHAAEVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALAHKY 145
-                             6789******************************************************************************************************************************************9 PP
+  == domain 1  score: 227.2 bits;  conditional E-value: 1.5e-70
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vhls+ ek++++++wgkv+a evGaeaL rllvvyP+t+r+Fd+F+dlss++av+g+akvkahGkkv++++++++k+ld+lkg++a+LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k++a+vanala+kYh
+               HBB_SPECI   1 VHLSDGEKNAISTAWGKVHAAEVGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALAHKYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBB_SPETO  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  218.7   0.2   5.9e-68   5.9e-68       1     143 []       3     145 ..       3     145 .. 0.99
+   1 !  226.6   0.6   2.2e-70   2.2e-70       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 218.7 bits;  conditional E-value: 5.9e-68
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             l++ ek++++++wgkv+a e+GaeaL rllvvyP+t+r+Fd+F+dlss++av+g+akvkahgkkv++++++++k+ld+lkg++a+LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k++a+vanal++kY
-               HBB_SPETO   3 LTDGEKNAISTAWGKVNAAEIGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALSHKY 145
-                             6889******************************************************************************************************************************************9 PP
-
->> HBB_ORNAN  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  217.3   0.0   1.5e-67   1.5e-67       1     143 []       3     145 ..       3     145 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 217.3 bits;  conditional E-value: 1.5e-67
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls  ek++v+++wgkv+++e+G+eaL rllvvyP+t+r+F+ F+dlss+ av+g++kvkahg+kvlt++g+a+k+lddlkg++akLselH++kl+vdpenf+ l++vl+vvLa++f+k+f+pevqaa++kl+++va+al++kY
-               HBB_ORNAN   3 LSGGEKSAVTNLWGKVNINELGGEALGRLLVVYPWTQRFFEAFGDLSSAGAVMGNPKVKAHGAKVLTSFGDALKNLDDLKGTFAKLSELHCDKLHVDPENFNRLGNVLIVVLARHFSKDFSPEVQAAWQKLVSGVAHALGHKY 145
-                             5788******************************************************************************************************************************************9 PP
+  == domain 1  score: 226.6 bits;  conditional E-value: 2.2e-70
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vhl++ ek++++++wgkv+a e+GaeaL rllvvyP+t+r+Fd+F+dlss++av+g+akvkahGkkv++++++++k+ld+lkg++a+LselH++kl+vdpenfkll++++v+v+a++++k+ftpe+qaa++k++a+vanal++kYh
+               HBB_SPETO   1 VHLTDGEKNAISTAWGKVNAAEIGAEALGRLLVVYPWTQRFFDSFGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDPENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALSHKYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBB_TRIIN  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  217.3   0.0   1.5e-67   1.5e-67       1     143 []       3     145 ..       3     145 .. 0.99
+   1 !  225.8   0.1   4.1e-70   4.1e-70       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 217.3 bits;  conditional E-value: 1.5e-67
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             l++eekalv  +w kv+++e+G+eaL rllvvyP+t+r+F++F+dlss++a+++++kvkahg+kv+t++g+++k+l+dlkga+a+LselH++kl+vdpenf+ll++vlv+vLa++f+kef+pe+qaa++k++a+vanala+kY
-               HBB_TRIIN   3 LTPEEKALVIGLWAKVNVKEYGGEALGRLLVVYPWTQRFFEHFGDLSSASAIMNNPKVKAHGEKVFTSFGDGLKHLEDLKGAFAELSELHCDKLHVDPENFRLLGNVLVCVLARHFGKEFSPEAQAAYQKVVAGVANALAHKY 145
-                             699*******************************************************************************************************************************************9 PP
+  == domain 1  score: 225.8 bits;  conditional E-value: 4.1e-70
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vhl++eekalv  +w kv+++e+G+eaL rllvvyP+t+r+F++F+dlss++a+++++kvkahG+kv+t++g+++k+l+dlkga+a+LselH++kl+vdpenf+ll++vlv+vLa++f+kef+pe+qaa++k++a+vanala+kYh
+               HBB_TRIIN   1 VHLTPEEKALVIGLWAKVNVKEYGGEALGRLLVVYPWTQRFFEHFGDLSSASAIMNNPKVKAHGEKVFTSFGDGLKHLEDLKGAFAELSELHCDKLHVDPENFRLLGNVLVCVLARHFGKEFSPEAQAAYQKVVAGVANALAHKYH 146
+                             8************************************************************************************************************************************************8 PP
+
+>> HBB_ORNAN  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  225.6   0.0   4.6e-70   4.6e-70       2     147 .]       1     146 []       1     146 [] 1.00
+
+  Alignments for each domain:
+  == domain 1  score: 225.6 bits;  conditional E-value: 4.6e-70
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vhls  ek++v+++wgkv+++e+G+eaL rllvvyP+t+r+F+ F+dlss+ av+g++kvkahG+kvlt++g+a+k+lddlkg++akLselH++kl+vdpenf+ l++vl+vvLa++f+k+f+pevqaa++kl+++va+al++kYh
+               HBB_ORNAN   1 VHLSGGEKSAVTNLWGKVNINELGGEALGRLLVVYPWTQRFFEAFGDLSSAGAVMGNPKVKAHGAKVLTSFGDALKNLDDLKGTFAKLSELHCDKLHVDPENFNRLGNVLIVVLARHFSKDFSPEVQAAWQKLVSGVAHALGHKYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBB_LARRI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  216.5   0.0   2.8e-67   2.8e-67       1     143 []       3     145 ..       3     145 .. 1.00
+   1 !  225.1   0.0   6.4e-70   6.4e-70       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 216.5 bits;  conditional E-value: 2.8e-67
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             +saeek+l++ +wgkv++ ++GaeaL+rll+vyP+t+r+F +F++lss++a++g++ v+ahgkkvlt++geavk+ld++k+++a+LselH++kl+vdpenf+ll+++l++vLaa+f k+ftp+ qaa++kl+++va+ala+kY
-               HBB_LARRI   3 WSAEEKQLITGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSSPTAINGNPMVRAHGKKVLTSFGEAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFAKDFTPDSQAAWQKLVRVVAHALARKY 145
-                             79********************************************************************************************************************************************9 PP
+  == domain 1  score: 225.1 bits;  conditional E-value: 6.4e-70
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vh+saeek+l++ +wgkv++ ++GaeaL+rll+vyP+t+r+F +F++lss++a++g++ v+ahGkkvlt++geavk+ld++k+++a+LselH++kl+vdpenf+ll+++l++vLaa+f k+ftp+ qaa++kl+++va+ala+kYh
+               HBB_LARRI   1 VHWSAEEKQLITGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSSPTAINGNPMVRAHGKKVLTSFGEAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFAKDFTPDSQAAWQKLVRVVAHALARKYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBB_TUPGL  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  211.9   0.0   7.2e-66   7.2e-66       1     143 []       3     145 ..       3     145 .. 0.99
+   1 !  220.3   0.0   1.9e-68   1.9e-68       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 211.9 bits;  conditional E-value: 7.2e-66
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls eeka+v+ +wgkv+ ++vG++ L  ll+vyP+t+r+Fd+F+dlss++av++++kvkahgkkvlt++++++++ld+lkg++akLselH++kl+vdpenf+ll++vlv vLa++f+ eftp+vqaa++k++a+vanala+kY
-               HBB_TUPGL   3 LSGEEKAAVTGLWGKVDLEKVGGQSLGSLLIVYPWTQRFFDSFGDLSSPSAVMSNPKVKAHGKKVLTSFSDGLNHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVRVLACNFGPEFTPQVQAAFQKVVAGVANALAHKY 145
-                             689*******************************************************************************************************************************************9 PP
+  == domain 1  score: 220.3 bits;  conditional E-value: 1.9e-68
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vhls eeka+v+ +wgkv+ ++vG++ L  ll+vyP+t+r+Fd+F+dlss++av++++kvkahGkkvlt++++++++ld+lkg++akLselH++kl+vdpenf+ll++vlv vLa++f+ eftp+vqaa++k++a+vanala+kYh
+               HBB_TUPGL   1 VHLSGEEKAAVTGLWGKVDLEKVGGQSLGSLLIVYPWTQRFFDSFGDLSSPSAVMSNPKVKAHGKKVLTSFSDGLNHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVRVLACNFGPEFTPQVQAAFQKVVAGVANALAHKYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBB1_VAREX  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  208.8   0.0   6.6e-65   6.6e-65       1     143 []       3     145 ..       3     145 .. 1.00
-
-  Alignments for each domain:
-  == domain 1  score: 208.8 bits;  conditional E-value: 6.6e-65
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ++aeek+l+ ++wgk++++ +G+e+L+ llv yP+t+r+F++F++lss++a++g+++vkahgkkvlt++g+a+k+ld++k+++akLselH++kl+vdp+nfkll++vlv+vLa +++keftp+++aa++kl+++v+++la++Y
-              HBB1_VAREX   3 WTAEEKQLICSLWGKIDVGLIGGETLAGLLVIYPWTQRQFSHFGNLSSPTAIAGNPRVKAHGKKVLTSFGDAIKNLDNIKDTFAKLSELHCDKLHVDPTNFKLLGNVLVIVLADHHGKEFTPAHHAAYQKLVNVVSHSLARRY 145
-                             79*******************************************************************************************************************************************99 PP
-
->> HBA_MESAU  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  200.6   0.3   2.1e-62   2.1e-62       1     143 []       2     140 ..       2     140 .. 0.99
+   1 !  217.3   0.1   1.7e-67   1.7e-67       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 200.6 bits;  conditional E-value: 2.1e-62
-                             xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             lsa++k++++++wgk+  +a+e+GaeaLer++ vyP+tk+yF++F d+s     +gsa+vk+hgkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p++ftp+v+a+ldk++a+v+++l++kY
-               HBA_MESAU   2 LSAKDKTNISEAWGKIggHAGEYGAEALERMFFVYPTTKTYFPHF-DVS-----HGSAQVKGHGKKVADALTNAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLANHHPADFTPAVHASLDKFFASVSTVLTSKY 140
-                             699*************8889*************************.999.....******************************************************************************************9 PP
-
->> HBA_PONPY  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  197.4   0.7   2.1e-61   2.1e-61       1     143 []       2     140 ..       2     140 .. 0.98
-
-  Alignments for each domain:
-  == domain 1  score: 197.4 bits;  conditional E-value: 2.1e-61
-                             xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+++k++vk++wgkv  +a+++GaeaLer++ ++P+tk+yF++F dls     +gsa+vk+hgkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+la+v+++l++kY
-               HBA_PONPY   2 LSPADKTNVKTAWGKVgaHAGDYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKDHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
-                             6899************77789************************.**9.....******************************************************************************************9 PP
+  == domain 1  score: 217.3 bits;  conditional E-value: 1.7e-67
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vh++aeek+l+ ++wgk++++ +G+e+L+ llv yP+t+r+F++F++lss++a++g+++vkahGkkvlt++g+a+k+ld++k+++akLselH++kl+vdp+nfkll++vlv+vLa +++keftp+++aa++kl+++v+++la++Yh
+              HBB1_VAREX   1 VHWTAEEKQLICSLWGKIDVGLIGGETLAGLLVIYPWTQRQFSHFGNLSSPTAIAGNPRVKAHGKKVLTSFGDAIKNLDNIKDTFAKLSELHCDKLHVDPTNFKLLGNVLVIVLADHHGKEFTPAHHAAYQKLVNVVSHSLARRYH 146
+                             8************************************************************************************************************************************************8 PP
 
 >> HBBL_RANCA  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  196.9   0.1   3.1e-61   3.1e-61       1     143 []       3     145 ..       3     145 .. 1.00
-
-  Alignments for each domain:
-  == domain 1  score: 196.9 bits;  conditional E-value: 3.1e-61
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ++aeeka +++vw+kv++++ G+eaL+rl++vyP+t+ryF++F+dlss++a++g++kv+ahgkk+l a+++a+++ldd+kg+l++Lse Ha++l+vdpenf+ l+evl+vvL ak++k+f+p+vq+ ++k++a++ +al++ Y
-              HBBL_RANCA   3 WTAEEKAVINSVWQKVDVEQDGHEALTRLFIVYPWTQRYFSTFGDLSSPAAIAGNPKVHAHGKKILGAIDNAIHNLDDVKGTLHDLSEEHANELHVDPENFRRLGEVLIVVLGAKLGKAFSPQVQHVWEKFIAVLVDALSHSY 145
-                             79*******************************************************************************************************************************************99 PP
-
->> HBA_MACFA  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  196.5   0.3   4.1e-61   4.1e-61       1     143 []       2     140 ..       2     140 .. 0.99
+   1 !  205.2   0.3   8.7e-64   8.7e-64       2     147 .]       1     146 []       1     146 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 196.5 bits;  conditional E-value: 4.1e-61
-                             xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+++k++vka+wgkv  +a+e+GaeaLer++ ++P+tk+yF++F dls     +gsa+vk+hgkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+la+v+++l++kY
-               HBA_MACFA   2 LSPADKTNVKAAWGKVggHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
-                             6899************8889*************************.**9.....******************************************************************************************9 PP
-
->> HBA_MACSI  
+  == domain 1  score: 205.2 bits;  conditional E-value: 8.7e-64
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakYh 147
+                             vh++aeeka +++vw+kv++++ G+eaL+rl++vyP+t+ryF++F+dlss++a++g++kv+ahGkk+l a+++a+++ldd+kg+l++Lse Ha++l+vdpenf+ l+evl+vvL ak++k+f+p+vq+ ++k++a++ +al++ Yh
+              HBBL_RANCA   1 VHWTAEEKAVINSVWQKVDVEQDGHEALTRLFIVYPWTQRYFSTFGDLSSPAAIAGNPKVHAHGKKILGAIDNAIHNLDDVKGTLHDLSEEHANELHVDPENFRRLGEVLIVVLGAKLGKAFSPQVQHVWEKFIAVLVDALSHSYH 146
+                             8************************************************************************************************************************************************8 PP
+
+>> HBA_MESAU  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  196.0   0.2   5.8e-61   5.8e-61       1     143 []       2     140 ..       2     140 .. 0.99
+   1 !  202.8   0.3     5e-63     5e-63       4     146 ..       2     140 ..       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 196.0 bits;  conditional E-value: 5.8e-61
+  == domain 1  score: 202.8 bits;  conditional E-value: 5e-63
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+++k++vk++wgkv  +a+e+GaeaLer++ ++P+tk+yF++F dls     +gsa+vk+hgkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+la+v+++l++kY
-               HBA_MACSI   2 LSPADKTNVKDAWGKVggHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
-                             6899************8889*************************.**9.....******************************************************************************************9 PP
-
->> HBA_AILME  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  195.2   0.1     1e-60     1e-60       1     143 []       2     140 ..       2     140 .. 0.99
-
-  Alignments for each domain:
-  == domain 1  score: 195.2 bits;  conditional E-value: 1e-60
-                             xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+++k++vka w+k+  +a+e+G+eaLer + ++P+tk+yF++F dls      gsa+vkahgkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v+a+ldk+++av+++l++kY
-               HBA_AILME   2 LSPADKTNVKATWDKIggHAGEYGGEALERTFASFPTTKTYFPHF-DLS-----PGSAQVKAHGKKVADALTTAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLASHHPAEFTPAVHASLDKFFSAVSTVLTSKY 140
-                             6899************8889*************************.**9.....9*****************************************************************************************9 PP
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             lsa++k++++++wgk+  +a+e+GaeaLer++ vyP+tk+yF++F d+s     +gsa+vk+hGkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p++ftp+v+a+ldk++a+v+++l++kY
+               HBA_MESAU   2 LSAKDKTNISEAWGKIggHAGEYGAEALERMFFVYPTTKTYFPHF-DVS-----HGSAQVKGHGKKVADALTNAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLANHHPADFTPAVHASLDKFFASVSTVLTSKY 140
+                             89**************8889*************************.999.....******************************************************************************************* PP
 
 >> HBB2_XENTR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  194.4   0.4   1.8e-60   1.8e-60       1     143 []       3     145 ..       3     145 .. 0.99
+   1 !  200.6   0.8   2.3e-62   2.3e-62       2     146 ..       1     145 [.       1     146 [] 1.00
+
+  Alignments for each domain:
+  == domain 1  score: 200.6 bits;  conditional E-value: 2.3e-62
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             vh++aeeka++++vwgkv++++ G++aL+rllvvyP+t+ryF++F++ls+ +av+g+ kvkahG+kvl+a+g+a+++ldd+k++l+ Ls++Ha++l+vdpenfk l++vlv+vLaak++++ftp+vqa ++kl a++ +al++ Y
+              HBB2_XENTR   1 VHWTAEEKATIASVWGKVDIEQDGHDALSRLLVVYPWTQRYFSSFGNLSNVSAVSGNVKVKAHGNKVLSAVGSAIQHLDDVKSHLKGLSKSHAEDLHVDPENFKRLADVLVIVLAAKLGSAFTPQVQAVWEKLNATLVAALSHGY 145
+                             8***********************************************************************************************************************************************9 PP
+
+>> HBA_PONPY  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  199.5   0.7     5e-62     5e-62       4     146 ..       2     140 ..       1     141 [] 0.98
+
+  Alignments for each domain:
+  == domain 1  score: 199.5 bits;  conditional E-value: 5e-62
+                             xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls+++k++vk++wgkv  +a+++GaeaLer++ ++P+tk+yF++F dls     +gsa+vk+hGkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+la+v+++l++kY
+               HBA_PONPY   2 LSPADKTNVKTAWGKVgaHAGDYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKDHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
+                             799*************77789************************.**9.....******************************************************************************************* PP
+
+>> HBA_MACFA  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  198.6   0.3   9.6e-62   9.6e-62       4     146 ..       2     140 ..       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 194.4 bits;  conditional E-value: 1.8e-60
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ++aeeka++++vwgkv++++ G++aL+rllvvyP+t+ryF++F++ls+ +av+g+ kvkahg+kvl+a+g+a+++ldd+k++l+ Ls++Ha++l+vdpenfk l++vlv+vLaak++++ftp+vqa ++kl a++ +al++ Y
-              HBB2_XENTR   3 WTAEEKATIASVWGKVDIEQDGHDALSRLLVVYPWTQRYFSSFGNLSNVSAVSGNVKVKAHGNKVLSAVGSAIQHLDDVKSHLKGLSKSHAEDLHVDPENFKRLADVLVIVLAAKLGSAFTPQVQAVWEKLNATLVAALSHGY 145
-                             79*******************************************************************************************************************************************99 PP
+  == domain 1  score: 198.6 bits;  conditional E-value: 9.6e-62
+                             xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls+++k++vka+wgkv  +a+e+GaeaLer++ ++P+tk+yF++F dls     +gsa+vk+hGkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+la+v+++l++kY
+               HBA_MACFA   2 LSPADKTNVKAAWGKVggHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
+                             799*************8889*************************.**9.....******************************************************************************************* PP
+
+>> HBA_MACSI  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  198.1   0.3   1.4e-61   1.4e-61       4     146 ..       2     140 ..       1     141 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 198.1 bits;  conditional E-value: 1.4e-61
+                             xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls+++k++vk++wgkv  +a+e+GaeaLer++ ++P+tk+yF++F dls     +gsa+vk+hGkkv++al+ av ++dd+ +al++Ls+lHa+kl+vdp+nfklls++l+v+Laa++p+eftp+v+a+ldk+la+v+++l++kY
+               HBA_MACSI   2 LSPADKTNVKDAWGKVggHAGEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY 140
+                             799*************8889*************************.**9.....******************************************************************************************* PP
+
+>> HBA_AILME  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  197.3   0.1   2.4e-61   2.4e-61       4     146 ..       2     140 ..       1     141 [] 0.99
+
+  Alignments for each domain:
+  == domain 1  score: 197.3 bits;  conditional E-value: 2.4e-61
+                             xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls+++k++vka w+k+  +a+e+G+eaLer + ++P+tk+yF++F dls      gsa+vkahGkkv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v+a+ldk+++av+++l++kY
+               HBA_AILME   2 LSPADKTNVKATWDKIggHAGEYGGEALERTFASFPTTKTYFPHF-DLS-----PGSAQVKAHGKKVADALTTAVGHLDDLPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLASHHPAEFTPAVHASLDKFFSAVSTVLTSKY 140
+                             799*************8889*************************.**9.....9****************************************************************************************** PP
 
 >> HBA2_GALCR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  193.7   0.5     3e-60     3e-60       1     143 []       2     140 ..       2     140 .. 0.98
+   1 !  195.7   0.6   7.3e-61   7.3e-61       4     146 ..       2     140 ..       1     141 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 193.7 bits;  conditional E-value: 3e-60
+  == domain 1  score: 195.7 bits;  conditional E-value: 7.3e-61
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+++k++vka+w+kv  +a+++GaeaLer++ ++P+tk+yF++F dls     +gs++vk+hgkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfkll ++l+v+La+++p+eftp+v+a+ldk++a+v+++l++kY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls+++k++vka+w+kv  +a+++GaeaLer++ ++P+tk+yF++F dls     +gs++vk+hGkkv++al++av ++dd+ +al++Ls+lHa+kl+vdp+nfkll ++l+v+La+++p+eftp+v+a+ldk++a+v+++l++kY
               HBA2_GALCR   2 LSPTDKSNVKAAWEKVgaHAGDYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSTQVKGHGKKVADALTNAVLHVDDMPSALSALSDLHAHKLRVDPVNFKLLRHCLLVTLACHHPAEFTPAVHASLDKFMASVSTVLTSKY 140
-                             6899************77789************************.**9.....******************************************************************************************9 PP
+                             799*************77789************************.**9.....******************************************************************************************* PP
 
 >> HBA_FRAPO  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  193.5   0.4   3.3e-60   3.3e-60       1     143 []       2     140 ..       2     140 .. 0.99
+   1 !  195.7   0.4   7.8e-61   7.8e-61       4     146 ..       2     140 ..       1     141 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 193.5 bits;  conditional E-value: 3.3e-60
+  == domain 1  score: 195.7 bits;  conditional E-value: 7.8e-61
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             lsa++k++vk ++gk+  +a+++GaeaLer++++yP+tk+yF++F dls     +gsa+vk+hgkkv++al ea +++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l+av n+l+akY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             lsa++k++vk ++gk+  +a+++GaeaLer++++yP+tk+yF++F dls     +gsa+vk+hGkkv++al ea +++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l+av n+l+akY
                HBA_FRAPO   2 LSAADKNNVKGIFGKIssHAEDYGAEALERMFITYPSTKTYFPHF-DLS-----HGSAQVKGHGKKVVAALIEAANHIDDIAGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGNVLTAKY 140
-                             699*************77799************************.**9.....******************************************************************************************9 PP
+                             79**************87799************************.**9.....******************************************************************************************* PP
 
 >> HBA_PHACO  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  193.5   0.4   3.4e-60   3.4e-60       1     143 []       2     140 ..       2     140 .. 0.99
+   1 !  195.6   0.4     8e-61     8e-61       4     146 ..       2     140 ..       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 193.5 bits;  conditional E-value: 3.4e-60
+  == domain 1  score: 195.6 bits;  conditional E-value: 8e-61
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             lsa++k++vk +++k+  +a+e+GaeaLer++++yP+tk+yF++F dls     +gsa++k+hgkkv++al eav+++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l+av ++l+akY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             lsa++k++vk +++k+  +a+e+GaeaLer++++yP+tk+yF++F dls     +gsa++k+hGkkv++al eav+++dd++g+l+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+++tpev+a+ldk+l+av ++l+akY
                HBA_PHACO   2 LSAADKNNVKGIFTKIagHAEEYGAEALERMFITYPSTKTYFPHF-DLS-----HGSAQIKGHGKKVVAALIEAVNHIDDITGTLSKLSDLHAHKLRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGTVLTAKY 140
-                             699*************8889*************************.**9.....******************************************************************************************9 PP
+                             79**************8889*************************.**9.....******************************************************************************************* PP
 
 >> HBA2_BOSMU  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  193.4   0.3   3.5e-60   3.5e-60       1     143 []       2     140 ..       2     140 .. 0.99
+   1 !  195.6   0.4   8.3e-61   8.3e-61       4     146 ..       2     140 ..       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 193.4 bits;  conditional E-value: 3.5e-60
+  == domain 1  score: 195.6 bits;  conditional E-value: 8.3e-61
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             lsa++k +vka+wgkv  +a e+GaeaLer++ ++P+tk+yF++F dls     +gsa+vk+hg+kv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls+ l+v+La+++p++ftp+v+a+ldk+la+v+++l++kY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             lsa++k +vka+wgkv  +a e+GaeaLer++ ++P+tk+yF++F dls     +gsa+vk+hG+kv++al++av +lddl gal++Ls+lHa+kl+vdp+nfklls+ l+v+La+++p++ftp+v+a+ldk+la+v+++l++kY
               HBA2_BOSMU   2 LSAADKGNVKAAWGKVggHAAEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGAKVAAALTKAVGHLDDLPGALSELSDLHAHKLRVDPVNFKLLSHSLLVTLASHLPSDFTPAVHASLDKFLANVSTVLTSKY 140
-                             699*************88899************************.**9.....******************************************************************************************9 PP
+                             79**************88899************************.**9.....******************************************************************************************* PP
 
 >> HBA_ERIEU  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  191.8   0.1   1.1e-59   1.1e-59       1     143 []       2     140 ..       2     140 .. 0.98
+   1 !  193.9   0.1   2.7e-60   2.7e-60       4     146 ..       2     140 ..       1     141 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 191.8 bits;  conditional E-value: 1.1e-59
+  == domain 1  score: 193.9 bits;  conditional E-value: 2.7e-60
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             lsa++ka+vk+ wgk+  + +e+G+eaL r+++ +P+tk+yF++F dl+      gsa+vk+hgkkv++al++av++ldd+ gal++Ls+lHa+kl+vdp+nfklls++l+v+La ++p++ftp+v+a+ldk+la+va++l++kY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             lsa++ka+vk+ wgk+  + +e+G+eaL r+++ +P+tk+yF++F dl+      gsa+vk+hGkkv++al++av++ldd+ gal++Ls+lHa+kl+vdp+nfklls++l+v+La ++p++ftp+v+a+ldk+la+va++l++kY
                HBA_ERIEU   2 LSATDKANVKTFWGKLggHGGEYGGEALDRMFQAHPTTKTYFPHF-DLN-----PGSAQVKGHGKKVADALTTAVNNLDDVPGALSALSDLHAHKLRVDPVNFKLLSHCLLVTLALHHPADFTPAVHASLDKFLATVATVLTSKY 140
-                             699*************77789************************.998.....9*****************************************************************************************9 PP
+                             79**************77789************************.998.....9****************************************************************************************** PP
 
 >> HBA_PROLO  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  191.4   0.0   1.5e-59   1.5e-59       1     143 []       2     140 ..       2     140 .. 0.99
+   1 !  193.5   0.0   3.6e-60   3.6e-60       4     146 ..       2     140 ..       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 191.4 bits;  conditional E-value: 1.5e-59
+  == domain 1  score: 193.5 bits;  conditional E-value: 3.6e-60
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+++ka++ka w+k+  +a+e+G+eaLer + ++P+tk+yF++F dls      gsa+vkahgkkv++al+ av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v+a+ldk++++v+++l++kY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls+++ka++ka w+k+  +a+e+G+eaLer + ++P+tk+yF++F dls      gsa+vkahGkkv++al+ av +lddl gal++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v+a+ldk++++v+++l++kY
                HBA_PROLO   2 LSPADKANIKATWDKIggHAGEYGGEALERTFASFPTTKTYFPHF-DLS-----PGSAQVKAHGKKVADALTLAVGHLDDLPGALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPAEFTPAVHASLDKFFTSVSTVLTSKY 140
-                             6899************8889*************************.**9.....9*****************************************************************************************9 PP
+                             799*************8889*************************.**9.....9****************************************************************************************** PP
 
 >> HBA_ANSSE  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  191.1   0.4   1.8e-59   1.8e-59       1     143 []       2     140 ..       2     140 .. 0.99
+   1 !  193.2   0.4   4.3e-60   4.3e-60       4     146 ..       2     140 ..       1     141 [] 0.99
 
   Alignments for each domain:
-  == domain 1  score: 191.1 bits;  conditional E-value: 1.8e-59
+  == domain 1  score: 193.2 bits;  conditional E-value: 4.3e-60
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             lsa++k +vk+v+gk+  +a+e+Gae+L+r+++++P+tk+yF++F dl+      gsa++kahgkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfk+l+++++vvLa ++p+ +tpev+a++dk+l+ava++l+akY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             lsa++k +vk+v+gk+  +a+e+Gae+L+r+++++P+tk+yF++F dl+      gsa++kahGkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfk+l+++++vvLa ++p+ +tpev+a++dk+l+ava++l+akY
                HBA_ANSSE   2 LSAADKGNVKTVFGKIggHAEEYGAETLQRMFQTFPQTKTYFPHF-DLQ-----PGSAQIKAHGKKVAAALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKFLGHCFLVVLAIHHPSLLTPEVHASMDKFLCAVATVLTAKY 140
-                             699*************8889*************************.998.....9*****************************************************************************************9 PP
+                             79**************8889*************************.998.....9****************************************************************************************** PP
 
 >> HBA_PAGLA  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  191.1   0.5   1.9e-59   1.9e-59       1     143 []       2     140 ..       2     140 .. 0.99
+   1 !  193.2   0.5   4.5e-60   4.5e-60       4     146 ..       2     140 ..       1     141 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 191.1 bits;  conditional E-value: 1.9e-59
+  == domain 1  score: 193.2 bits;  conditional E-value: 4.5e-60
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+++k+++ka w+k+  +a+e+GaeaLer ++++P+tk+yF++F dls     +gsa+vkahgkkv++al+ av +l+dl +al++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v++aldk+++av+++l++kY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls+++k+++ka w+k+  +a+e+GaeaLer ++++P+tk+yF++F dls     +gsa+vkahGkkv++al+ av +l+dl +al++Ls+lHa+kl+vdp+nfklls++l+v+La+++p+eftp+v++aldk+++av+++l++kY
                HBA_PAGLA   2 LSSADKNNIKATWDKIgsHAGEYGAEALERTFISFPTTKTYFPHF-DLS-----HGSAQVKAHGKKVADALTLAVGHLEDLPNALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPAEFTPAVHSALDKFFSAVSTVLTSKY 140
-                             6899************87799************************.**9.....******************************************************************************************9 PP
+                             799*************87799************************.**9.....******************************************************************************************* PP
 
 >> HBA_TRIOC  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  188.4   0.5   1.2e-58   1.2e-58       1     143 []       2     140 ..       2     140 .. 0.99
+   1 !  190.5   0.5   2.9e-59   2.9e-59       4     146 ..       2     140 ..       1     141 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 188.4 bits;  conditional E-value: 1.2e-58
+  == domain 1  score: 190.5 bits;  conditional E-value: 2.9e-59
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             lsa++k++vk+v++k+  +a+++Gae+Ler++++yP tk+yF++F dl      +gsa++kahgkkv+ al eav+++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+ +tpev+a+ldk+l+av n+l+akY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             lsa++k++vk+v++k+  +a+++Gae+Ler++++yP tk+yF++F dl      +gsa++kahGkkv+ al eav+++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a ++p+ +tpev+a+ldk+l+av n+l+akY
                HBA_TRIOC   2 LSANDKTNVKTVFTKItgHAEDYGAETLERMFITYPPTKTYFPHF-DLH-----HGSAQIKAHGKKVVGALIEAVNHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGQCFLVVVAIHHPSVLTPEVHASLDKFLCAVGNVLSAKY 140
-                             699*************8889*************************.996.....******************************************************************************************9 PP
+                             89**************8889*************************.996.....******************************************************************************************* PP
 
 >> HBAD_CHLME  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  187.1   0.6   3.2e-58   3.2e-58       1     143 []       2     140 ..       2     140 .. 0.98
+   1 !  189.3   0.5     7e-59     7e-59       4     146 ..       2     140 ..       1     141 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 187.1 bits;  conditional E-value: 3.2e-58
+  == domain 1  score: 189.3 bits;  conditional E-value: 7e-59
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             l+a++k+l++++w+kv  +++e+G+eaL+r++ +yP+tk+yF++F dl       gs++v++hgkkv++alg+avk+ld+l++al++Ls+lHa++l+vdp nfkll++++ vvLa++++k+++pe++aa+dk+l+ava++la+kY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             l+a++k+l++++w+kv  +++e+G+eaL+r++ +yP+tk+yF++F dl       gs++v++hGkkv++alg+avk+ld+l++al++Ls+lHa++l+vdp nfkll++++ vvLa++++k+++pe++aa+dk+l+ava++la+kY
               HBAD_CHLME   2 LTADDKKLLTQLWEKVagHQEEFGSEALQRMFLTYPQTKTYFPHF-DLH-----PGSEQVRGHGKKVAAALGNAVKSLDNLSQALSELSNLHAYNLRVDPANFKLLAQCFQVVLATHLGKDYSPEMHAAFDKFLSAVAAVLAEKY 140
-                             799*************8889*************************.996.....9*****************************************************************************************9 PP
+                             89**************8889*************************.996.....9****************************************************************************************** PP
 
 >> HBAZ_HORSE  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  186.9   0.1   3.8e-58   3.8e-58       1     143 []       2     140 ..       2     140 .. 0.98
+   1 !  189.1   0.1   8.2e-59   8.2e-59       4     146 ..       2     140 ..       1     141 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 186.9 bits;  conditional E-value: 3.8e-58
+  == domain 1  score: 189.1 bits;  conditional E-value: 8.2e-59
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             l+++e+++v ++wgk+  +ad+vG+eaL+rl+ +yP+tk+yF++F dl      +gs++++ahg+kv++a+g+avk++d+++galakLselHa+ l+vdp+nfk+ls++l+v+La+++p++ft++++aa+dk+l+ v+++l++kY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             l+++e+++v ++wgk+  +ad+vG+eaL+rl+ +yP+tk+yF++F dl      +gs++++ahG+kv++a+g+avk++d+++galakLselHa+ l+vdp+nfk+ls++l+v+La+++p++ft++++aa+dk+l+ v+++l++kY
               HBAZ_HORSE   2 LTKAERTMVVSIWGKIsmQADAVGTEALQRLFSSYPQTKTYFPHF-DLH-----EGSPQLRAHGSKVAAAVGDAVKSIDNVAGALAKLSELHAYILRVDPVNFKFLSHCLLVTLASRLPADFTADAHAAWDKFLSIVSSVLTEKY 140
-                             6899************66689************************.996.....9*****************************************************************************************9 PP
+                             899*************66689************************.996.....9****************************************************************************************** PP
 
 >> HBA_COLLI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  185.9   0.2   7.4e-58   7.4e-58       1     143 []       2     140 ..       2     140 .. 0.98
+   1 !  188.0   0.2   1.8e-58   1.8e-58       4     146 ..       2     140 ..       1     141 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 185.9 bits;  conditional E-value: 7.4e-58
+  == domain 1  score: 188.0 bits;  conditional E-value: 1.8e-58
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             lsa++k++vkav+ k+  +a+++G+eaLerl+++yP+tk+yF++F dls     +gsa++k+hgkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a +fp+ +tpev+a+ldk++ av ++l+akY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             lsa++k++vkav+ k+  +a+++G+eaLerl+++yP+tk+yF++F dls     +gsa++k+hGkkv++al ea +++dd++gal+kLs+lHa+kl+vdp+nfkll+++++vv+a +fp+ +tpev+a+ldk++ av ++l+akY
                HBA_COLLI   2 LSANDKSNVKAVFAKIggQAGDLGGEALERLFITYPQTKTYFPHF-DLS-----HGSAQIKGHGKKVAEALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKLLGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAKY 140
-                             699*************77789************************.**9.....******************************************************************************************9 PP
+                             89**************77789************************.**9.....******************************************************************************************* PP
 
 >> HBAD_PASMO  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  185.5   0.1   9.9e-58   9.9e-58       1     143 []       2     140 ..       2     140 .. 0.98
+   1 !  187.7   0.1   2.2e-58   2.2e-58       4     146 ..       2     140 ..       1     141 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 185.5 bits;  conditional E-value: 9.9e-58
+  == domain 1  score: 187.7 bits;  conditional E-value: 2.2e-58
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             l+ae+k+l++++wgk+   ++e+Ga+aL r++++yP+tk+yF++F dls     +gs+++++hgkkv++al++a+k+ld+l++al++Ls+lHa++l+vdp+nfk+ls++l v La++++ke++pev++a+dk+++ava++la+kY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             l+ae+k+l++++wgk+   ++e+Ga+aL r++++yP+tk+yF++F dls     +gs+++++hGkkv++al++a+k+ld+l++al++Ls+lHa++l+vdp+nfk+ls++l v La++++ke++pev++a+dk+++ava++la+kY
               HBAD_PASMO   2 LTAEDKKLIQQIWGKLggAEEEIGADALWRMFHSYPSTKTYFPHF-DLS-----QGSDQIRGHGKKVVAALSNAIKNLDNLSQALSELSNLHAYNLRVDPVNFKFLSQCLQVSLATRLGKEYSPEVHSAVDKFMSAVASVLAEKY 140
-                             79**************65478************************.**9.....9*****************************************************************************************9 PP
+                             89**************65478************************.**9.....9****************************************************************************************** PP
+
+>> MYG_SAISC  
+   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
+ ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
+   1 !  183.9   1.0   3.2e-57   3.2e-57       4     146 ..       2     146 ..       1     147 [. 0.98
+
+  Alignments for each domain:
+  == domain 1  score: 183.9 bits;  conditional E-value: 3.2e-57
+                             xxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkvead..evGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls+ e++lv ++wgkvead  ++G+e+L+ l++ +Pet ++FdkFk+l+sed++k+s+++k+hG++vltalg ++kk+++++++l++L+++Hatk+k+++++++l+s+++v+vL++k+p++f++++q a++k+l++++n++aakY
+               MYG_SAISC   2 LSDGEWQLVLNIWGKVEADipSHGQEVLISLFKGHPETLEKFDKFKHLKSEDEMKASEELKKHGTTVLTALGGILKKKGQHEAELKPLAQSHATKHKIPVKYLELISDAIVHVLQKKHPGDFGADAQGAMKKALELFRNDMAAKY 146
+                             7889************9998899************************************************************************************************************************** PP
 
 >> MYG_LYCPI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  181.9   1.9   1.3e-56   1.3e-56       1     143 []       2     146 ..       2     146 .. 0.97
+   1 !  183.9   1.9   3.3e-57   3.3e-57       4     146 ..       2     146 ..       1     147 [. 0.97
 
   Alignments for each domain:
-  == domain 1  score: 181.9 bits;  conditional E-value: 1.3e-56
+  == domain 1  score: 183.9 bits;  conditional E-value: 3.3e-57
                              xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+ e++ v ++wgkve+d +G  +e+L+rl++++Pet ++FdkFk+l++ed++kgs+++k+hg++vltalg ++kk+++++++l++L+++Hatk+k+++++++++s+++++vL++k++++f+++++aa++k+l++++n++aakY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls+ e++ v ++wgkve+d +G  +e+L+rl++++Pet ++FdkFk+l++ed++kgs+++k+hG++vltalg ++kk+++++++l++L+++Hatk+k+++++++++s+++++vL++k++++f+++++aa++k+l++++n++aakY
                MYG_LYCPI   2 LSDGEWQIVLNIWGKVETDLAGhgQEVLIRLFKNHPETLDKFDKFKHLKTEDEMKGSEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPVKYLEFISDAIIQVLQNKHSGDFHADTEAAMKKALELFRNDIAAKY 146
-                             57889***********99966444************************************************************************************************************************9 PP
-
->> MYG_SAISC  
+                             7889************99966444************************************************************************************************************************* PP
+
+>> MYG_PROGU  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  181.9   1.1   1.3e-56   1.3e-56       1     143 []       2     146 ..       2     146 .. 0.98
+   1 !  182.4   0.2   9.2e-57   9.2e-57       4     146 ..       2     146 ..       1     147 [. 0.97
 
   Alignments for each domain:
-  == domain 1  score: 181.9 bits;  conditional E-value: 1.3e-56
+  == domain 1  score: 182.4 bits;  conditional E-value: 9.2e-57
                              xxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkvead..evGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+ e++lv ++wgkvead  ++G+e+L+ l++ +Pet ++FdkFk+l+sed++k+s+++k+hg++vltalg ++kk+++++++l++L+++Hatk+k+++++++l+s+++v+vL++k+p++f++++q a++k+l++++n++aakY
-               MYG_SAISC   2 LSDGEWQLVLNIWGKVEADipSHGQEVLISLFKGHPETLEKFDKFKHLKSEDEMKASEELKKHGTTVLTALGGILKKKGQHEAELKPLAQSHATKHKIPVKYLELISDAIVHVLQKKHPGDFGADAQGAMKKALELFRNDMAAKY 146
-                             57889***********9998899*************************************************************************************************************************9 PP
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkvead..evGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls+ e++lv +vwgkve d   +G+e+L+rl++ +Pet ++FdkFk+l++ed++++s+++k+hG++vltalg ++kk+++++++la+L+++Hatk+k+++++++++se++++vL++k+p++f++++q a++k+l++++n++aakY
+               MYG_PROGU   2 LSDGEWQLVLNVWGKVEGDlsGHGQEVLIRLFKGHPETLEKFDKFKHLKAEDEMRASEELKKHGTTVLTALGGILKKKGQHAAELAPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDIAAKY 146
+                             7889************98833557************************************************************************************************************************* PP
 
 >> MYG_ESCGI  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  180.8   1.7   2.8e-56   2.8e-56       1     143 []       2     146 ..       2     146 .. 0.97
+   1 !  182.4   2.3   9.7e-57   9.7e-57       4     146 ..       2     146 ..       1     147 [. 0.97
 
   Alignments for each domain:
-  == domain 1  score: 180.8 bits;  conditional E-value: 2.8e-56
+  == domain 1  score: 182.4 bits;  conditional E-value: 9.7e-57
                              xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls++e++lv ++w kvead +G  +++L+rl++ +Pet ++FdkFk+l++e+++k+s+++k+hg++vltalg ++kk+++++++l++L+++Hatk+k+++++++++s+++++vL++++p++f++++qaa++k+l+++++++aakY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls++e++lv ++w kvead +G  +++L+rl++ +Pet ++FdkFk+l++e+++k+s+++k+hG++vltalg ++kk+++++++l++L+++Hatk+k+++++++++s+++++vL++++p++f++++qaa++k+l+++++++aakY
                MYG_ESCGI   2 LSDAEWQLVLNIWAKVEADVAGhgQDILIRLFKGHPETLEKFDKFKHLKTEAEMKASEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSRHPGDFGADAQAAMNKALELFRKDIAAKY 146
-                             6899************99966444************************************************************************************************************************9 PP
-
->> MYG_PROGU  
-   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
- ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  180.4   0.2   3.6e-56   3.6e-56       1     143 []       2     146 ..       2     146 .. 0.97
-
-  Alignments for each domain:
-  == domain 1  score: 180.4 bits;  conditional E-value: 3.6e-56
-                             xxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkvead..evGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+ e++lv +vwgkve d   +G+e+L+rl++ +Pet ++FdkFk+l++ed++++s+++k+hg++vltalg ++kk+++++++la+L+++Hatk+k+++++++++se++++vL++k+p++f++++q a++k+l++++n++aakY
-               MYG_PROGU   2 LSDGEWQLVLNVWGKVEGDlsGHGQEVLIRLFKGHPETLEKFDKFKHLKAEDEMRASEELKKHGTTVLTALGGILKKKGQHAAELAPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDIAAKY 146
-                             57889***********98833557************************************************************************************************************************9 PP
+                             7999************99966444************************************************************************************************************************* PP
 
 >> MYG_HORSE  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  178.9   1.0   1.1e-55   1.1e-55       1     143 []       2     146 ..       2     146 .. 0.97
+   1 !  180.9   1.0   2.7e-56   2.7e-56       4     146 ..       2     146 ..       1     147 [. 0.97
 
   Alignments for each domain:
-  == domain 1  score: 178.9 bits;  conditional E-value: 1.1e-55
+  == domain 1  score: 180.9 bits;  conditional E-value: 2.7e-56
                              xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+ e+++v +vwgkvead +G  +e+L+rl++ +Pet ++FdkFk+l++e+++k+s+++k+hg+ vltalg ++kk+++++++l++L+++Hatk+k+++++++++s+++++vL++k+p++f++++q a++k+l++++n++aakY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls+ e+++v +vwgkvead +G  +e+L+rl++ +Pet ++FdkFk+l++e+++k+s+++k+hG+ vltalg ++kk+++++++l++L+++Hatk+k+++++++++s+++++vL++k+p++f++++q a++k+l++++n++aakY
                MYG_HORSE   2 LSDGEWQQVLNVWGKVEADIAGhgQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSKHPGNFGADAQGAMTKALELFRNDIAAKY 146
-                             57889***********99965444************************************************************************************************************************9 PP
+                             7889************99965444************************************************************************************************************************* PP
 
 >> MYG_MOUSE  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  178.0   0.3     2e-55     2e-55       1     143 []       2     146 ..       2     146 .. 0.97
+   1 !  180.0   0.3   5.2e-56   5.2e-56       4     146 ..       2     146 ..       1     147 [. 0.97
 
   Alignments for each domain:
-  == domain 1  score: 178.0 bits;  conditional E-value: 2e-55
+  == domain 1  score: 180.0 bits;  conditional E-value: 5.2e-56
                              xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             ls+ e++lv +vwgkvead +G  +e+L+ l++++Pet ++FdkFk+l+se+++kgs+++k+hg +vltalg+++kk++++++++++L+++Hatk+k+++++++++se+++ vL+++++++f++++q a++k+l++++n++aakY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkveadevG..aeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             ls+ e++lv +vwgkvead +G  +e+L+ l++++Pet ++FdkFk+l+se+++kgs+++k+hG +vltalg+++kk++++++++++L+++Hatk+k+++++++++se+++ vL+++++++f++++q a++k+l++++n++aakY
                MYG_MOUSE   2 LSDGEWQLVLNVWGKVEADLAGhgQEVLIGLFKTHPETLDKFDKFKNLKSEEDMKGSEDLKKHGCTVLTALGTILKKKGQHAAEIQPLAQSHATKHKIPVKYLEFISEIIIEVLKKRHSGDFGADAQGAMSKALELFRNDIAAKY 146
-                             57889************9976544************************************************************************************************************************9 PP
+                             7889*************9976544************************************************************************************************************************* PP
 
 >> HBA4_SALIR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  177.1   0.1   3.8e-55   3.8e-55       1     143 []       2     141 ..       2     141 .. 0.98
+   1 !  179.3   0.1   8.3e-56   8.3e-56       4     146 ..       2     141 ..       1     142 [] 0.98
 
   Alignments for each domain:
-  == domain 1  score: 177.1 bits;  conditional E-value: 3.8e-55
+  == domain 1  score: 179.3 bits;  conditional E-value: 8.3e-56
                              xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             lsa++ka+vka+wgk+  ++de+G++aL+r+lvvyP+tk yF+++++++      gsa vk+hg +++++++++v ++ddl g l+kLselHatkl+vdp+nfk+l++ l+vv+aa fp+eftpe++ ++dk+l+++a ala+kY
+  sp|P02024|HBB_GORGO-i1   4 lsaeekalvkavwgkv..eadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             lsa++ka+vka+wgk+  ++de+G++aL+r+lvvyP+tk yF+++++++      gsa vk+hG +++++++++v ++ddl g l+kLselHatkl+vdp+nfk+l++ l+vv+aa fp+eftpe++ ++dk+l+++a ala+kY
               HBA4_SALIR   2 LSAKDKANVKAIWGKIlpKSDEIGEQALSRMLVVYPQTKAYFSHWASVA-----PGSAPVKKHGITIMNQIDDCVGHMDDLFGFLTKLSELHATKLRVDPTNFKILAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALALAEKY 141
-                             699*************999**************************7765.....9*****************************************************************************************9 PP
+                             89**************999**************************7765.....9****************************************************************************************** PP
 
 >> HBB2_TRICR  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  171.6   0.0     2e-53     2e-53       1     143 []       3     145 .]       3     145 .] 0.99
+   1 !  177.5   0.0     3e-55     3e-55       2     146 ..       1     145 []       1     145 [] 1.00
 
   Alignments for each domain:
-  == domain 1  score: 171.6 bits;  conditional E-value: 2e-53
-                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   1 lsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
-                             l+ae++++++a++gkv++d++G+++L+rl+vv P+++ryF++F+dlss+da+++++kv ahg+kv++++ ea k+ld+l++ +a+Ls +H+ k+ vdpenfkl+s +++v+La +++++f+++ q a++kl+++v++al++ Y
-              HBB2_TRICR   3 LTAEDRKEIAAILGKVNVDSLGGQCLARLIVVNPWSRRYFHDFGDLSSCDAICRNPKVLAHGAKVMRSIVEATKHLDNLREYYADLSVTHSLKFYVDPENFKLFSGIVIVCLALTLQTDFSCHKQLAFEKLMKGVSHALGHGY 145
-                             79*******************************************************************************************************************************************99 PP
+  == domain 1  score: 177.5 bits;  conditional E-value: 3e-55
+                             xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
+  sp|P02024|HBB_GORGO-i1   2 vhlsaeekalvkavwgkveadevGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
+                             vhl+ae++++++a++gkv++d++G+++L+rl+vv P+++ryF++F+dlss+da+++++kv ahG+kv++++ ea k+ld+l++ +a+Ls +H+ k+ vdpenfkl+s +++v+La +++++f+++ q a++kl+++v++al++ Y
+              HBB2_TRICR   1 VHLTAEDRKEIAAILGKVNVDSLGGQCLARLIVVNPWSRRYFHDFGDLSSCDAICRNPKVLAHGAKVMRSIVEATKHLDNLREYYADLSVTHSLKFYVDPENFKLFSGIVIVCLALTLQTDFSCHKQLAFEKLMKGVSHALGHGY 145
+                             8**********************************************************************************************************************************************99 PP
 
 >> MYG_MUSAN  
    #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
  ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
-   1 !  143.2   0.3   1.1e-44   1.1e-44       5     143 .]       2     141 ..       1     141 [. 0.96
+   1 !  144.3   0.3   5.1e-45   5.1e-45       8     146 ..       2     141 ..       1     142 [. 0.96
 
   Alignments for each domain:
-  == domain 1  score: 143.2 bits;  conditional E-value: 1.1e-44
+  == domain 1  score: 144.3 bits;  conditional E-value: 5.1e-45
                              xxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
-  sp|P02024|HBB_GORGO-i1   5 ekalvkavwgkvead..evGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahgkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 143
+  sp|P02024|HBB_GORGO-i1   8 ekalvkavwgkvead..evGaeaLerllvvyPetkryFdkFkdlssedavkgsakvkahGkkvltalgeavkklddlkgalakLselHatklkvdpenfkllsevlvvvLaakfpkeftpevqaaldkllaavanalaakY 146
                              ++++v++vw+ ve+d  ++G+++L rl+++yPe++++F+kFk++s   ++k++a++ka++++vl+alg++vkk++++++ +++L+++H+t++k++p++f+ ++++ v vL++++p+e++++vqaa++ +++ + +++ ++Y
                MYG_MUSAN   2 DWEKVNSVWSAVESDltAIGQNILLRLFEQYPESQNHFPKFKNKS-LGELKDTADIKAQADTVLSALGNIVKKKGSHSQPVKALAATHITTHKIPPHYFTKITTIAVDVLSEMYPSEMNAQVQAAFSGAFKIICSDIEKEY 141
-                             7899********9886689**********************9998.667*************************************************************************************9999888 PP
+                             7899********9886689**********************9998.667****************************************************************************************9999 PP
 
 
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (143 nodes)
-Target sequences:                           45  (6519 residues searched)
+Query model(s):                            1  (147 nodes)
+Target sequences:                         45  (6519 residues searched)
 Passed MSV filter:                        45  (1); expected 0.9 (0.02)
 Passed bias filter:                       45  (1); expected 0.9 (0.02)
 Passed Vit filter:                        45  (1); expected 0.0 (0.001)
 Passed Fwd filter:                        45  (1); expected 0.0 (1e-05)
 Initial search space (Z):                 45  [actual number of targets]
 Domain search space  (domZ):              45  [number of targets reported over threshold]
-# CPU time: 0.34u 0.01s 00:00:00.35 Elapsed: 00:00:01.00
-# Mc/sec: 0.93
+# CPU time: 0.17u 0.00s 00:00:00.17 Elapsed: 00:00:00.17
+# Mc/sec: 5.33
 
 @@ New targets included:   0
 @@ New alignment includes: 46 subseqs (was 46), including original query
--- a/test-data/jackhmmer.tblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/jackhmmer.tblout	Mon Jun 11 15:52:05 2018 -0400
@@ -1,103 +1,103 @@
 #                                                               --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
 # target name        accession  query name           accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
 #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
-HBB_MANSP            -          sp|P02185|MYG_PHYCD  -            7.7e-69  221.6   0.1   8.6e-69  221.5   0.1   1.0   1   0   0   1   1   1   1 -
-HBB_URSMA            -          sp|P02185|MYG_PHYCD  -            4.1e-68  219.3   0.2   4.5e-68  219.1   0.2   1.0   1   0   0   1   1   1   1 -
-HBB_RABIT            -          sp|P02185|MYG_PHYCD  -            5.6e-67  215.6   0.5   6.3e-67  215.4   0.5   1.0   1   0   0   1   1   1   1 -
-HBB_CALAR            -          sp|P02185|MYG_PHYCD  -            1.5e-66  214.2   0.1   1.7e-66  214.0   0.1   1.0   1   0   0   1   1   1   1 -
-HBB_TACAC            -          sp|P02185|MYG_PHYCD  -              5e-66  212.5   0.3   5.6e-66  212.4   0.3   1.0   1   0   0   1   1   1   1 -
-HBB_COLLI            -          sp|P02185|MYG_PHYCD  -            5.2e-66  212.5   0.0   5.7e-66  212.3   0.0   1.0   1   0   0   1   1   1   1 -
-HBE_PONPY            -          sp|P02185|MYG_PHYCD  -            6.6e-66  212.1   0.2   7.4e-66  212.0   0.2   1.0   1   0   0   1   1   1   1 -
-HBB_SUNMU            -          sp|P02185|MYG_PHYCD  -            7.2e-66  212.0   0.1     8e-66  211.9   0.1   1.0   1   0   0   1   1   1   1 -
-HBB_ORNAN            -          sp|P02185|MYG_PHYCD  -              1e-65  211.5   0.0   1.2e-65  211.3   0.0   1.0   1   0   0   1   1   1   1 -
-HBB_SPETO            -          sp|P02185|MYG_PHYCD  -            1.5e-65  211.0   0.4   1.7e-65  210.8   0.4   1.0   1   0   0   1   1   1   1 -
-HBB_EQUHE            -          sp|P02185|MYG_PHYCD  -            1.6e-65  210.9   0.2   1.8e-65  210.7   0.2   1.0   1   0   0   1   1   1   1 -
-HBB_SPECI            -          sp|P02185|MYG_PHYCD  -            2.3e-65  210.4   0.9   2.5e-65  210.2   0.9   1.0   1   0   0   1   1   1   1 -
-HBB_LARRI            -          sp|P02185|MYG_PHYCD  -              3e-65  210.0   0.0   3.4e-65  209.8   0.0   1.0   1   0   0   1   1   1   1 -
-HBB_TRIIN            -          sp|P02185|MYG_PHYCD  -              8e-65  208.6   0.1   8.9e-65  208.5   0.1   1.0   1   0   0   1   1   1   1 -
-HBB_TUPGL            -          sp|P02185|MYG_PHYCD  -            1.2e-62  201.6   0.0   1.3e-62  201.5   0.0   1.0   1   0   0   1   1   1   1 -
-HBA_MESAU            -          sp|P02185|MYG_PHYCD  -            1.5e-61  198.0   0.6   1.7e-61  197.8   0.6   1.0   1   0   0   1   1   1   1 -
-HBB1_VAREX           -          sp|P02185|MYG_PHYCD  -              3e-61  197.0   0.1   3.4e-61  196.9   0.1   1.0   1   0   0   1   1   1   1 -
-HBA_MACFA            -          sp|P02185|MYG_PHYCD  -              6e-61  196.1   1.1   6.6e-61  195.9   1.1   1.0   1   0   0   1   1   1   1 -
-HBA_MACSI            -          sp|P02185|MYG_PHYCD  -            9.7e-61  195.4   1.0   1.1e-60  195.2   1.0   1.0   1   0   0   1   1   1   1 -
-HBA2_BOSMU           -          sp|P02185|MYG_PHYCD  -            3.2e-60  193.7   0.9   3.6e-60  193.6   0.9   1.0   1   0   0   1   1   1   1 -
-HBA_PONPY            -          sp|P02185|MYG_PHYCD  -            3.2e-60  193.7   2.0   3.6e-60  193.5   2.0   1.0   1   0   0   1   1   1   1 -
-HBA2_GALCR           -          sp|P02185|MYG_PHYCD  -            4.2e-60  193.3   1.5   4.7e-60  193.2   1.5   1.0   1   0   0   1   1   1   1 -
-HBA_AILME            -          sp|P02185|MYG_PHYCD  -            5.7e-60  192.9   0.5   6.3e-60  192.7   0.5   1.0   1   0   0   1   1   1   1 -
-HBA_FRAPO            -          sp|P02185|MYG_PHYCD  -            9.6e-60  192.2   0.6   1.1e-59  192.0   0.6   1.0   1   0   0   1   1   1   1 -
-HBA_ANSSE            -          sp|P02185|MYG_PHYCD  -              1e-59  192.1   0.9   1.1e-59  191.9   0.9   1.0   1   0   0   1   1   1   1 -
-HBA_PHACO            -          sp|P02185|MYG_PHYCD  -            2.2e-59  191.0   0.6   2.4e-59  190.9   0.6   1.0   1   0   0   1   1   1   1 -
-HBA_PROLO            -          sp|P02185|MYG_PHYCD  -            2.4e-59  190.9   0.2   2.6e-59  190.7   0.2   1.0   1   0   0   1   1   1   1 -
-HBA_ERIEU            -          sp|P02185|MYG_PHYCD  -              4e-59  190.1   0.3   4.5e-59  190.0   0.3   1.0   1   0   0   1   1   1   1 -
-HBA_PAGLA            -          sp|P02185|MYG_PHYCD  -            4.2e-59  190.1   0.9   4.7e-59  189.9   0.9   1.0   1   0   0   1   1   1   1 -
-HBA_TRIOC            -          sp|P02185|MYG_PHYCD  -            1.6e-58  188.2   0.6   1.8e-58  188.0   0.6   1.0   1   0   0   1   1   1   1 -
-HBAD_CHLME           -          sp|P02185|MYG_PHYCD  -            3.9e-58  186.9   0.9   4.3e-58  186.8   0.9   1.0   1   0   0   1   1   1   1 -
-HBA_COLLI            -          sp|P02185|MYG_PHYCD  -            3.5e-57  183.8   0.4   3.9e-57  183.7   0.4   1.0   1   0   0   1   1   1   1 -
-HBBL_RANCA           -          sp|P02185|MYG_PHYCD  -            5.8e-57  183.1   0.2   6.5e-57  183.0   0.2   1.0   1   0   0   1   1   1   1 -
-HBAD_PASMO           -          sp|P02185|MYG_PHYCD  -            6.3e-56  179.8   0.1     7e-56  179.6   0.1   1.0   1   0   0   1   1   1   1 -
-HBAZ_HORSE           -          sp|P02185|MYG_PHYCD  -            9.4e-56  179.2   0.1     1e-55  179.1   0.1   1.0   1   0   0   1   1   1   1 -
-HBB2_XENTR           -          sp|P02185|MYG_PHYCD  -              4e-55  177.2   0.7   4.4e-55  177.0   0.7   1.0   1   0   0   1   1   1   1 -
-MYG_PROGU            -          sp|P02185|MYG_PHYCD  -            9.5e-55  176.0   1.6   1.1e-54  175.8   1.6   1.0   1   0   0   1   1   1   1 -
-MYG_LYCPI            -          sp|P02185|MYG_PHYCD  -            2.6e-54  174.6   5.3   2.9e-54  174.4   5.3   1.0   1   0   0   1   1   1   1 -
-MYG_MOUSE            -          sp|P02185|MYG_PHYCD  -            1.1e-53  172.5   1.6   1.2e-53  172.4   1.6   1.0   1   0   0   1   1   1   1 -
-MYG_SAISC            -          sp|P02185|MYG_PHYCD  -            1.2e-53  172.4   4.3   1.4e-53  172.2   4.3   1.0   1   0   0   1   1   1   1 -
-MYG_HORSE            -          sp|P02185|MYG_PHYCD  -            1.5e-53  172.1   4.2   1.7e-53  171.9   4.2   1.0   1   0   0   1   1   1   1 -
-MYG_ESCGI            -          sp|P02185|MYG_PHYCD  -              5e-53  170.4   5.7   5.6e-53  170.2   5.7   1.0   1   0   0   1   1   1   1 -
-HBA4_SALIR           -          sp|P02185|MYG_PHYCD  -            3.8e-52  167.5   0.1   4.2e-52  167.4   0.1   1.0   1   0   0   1   1   1   1 -
-HBB2_TRICR           -          sp|P02185|MYG_PHYCD  -            5.2e-50  160.6   0.0   5.8e-50  160.5   0.0   1.0   1   0   0   1   1   1   1 -
-MYG_MUSAN            -          sp|P02185|MYG_PHYCD  -            2.1e-45  145.7   0.4   2.3e-45  145.5   0.4   1.0   1   0   0   1   1   1   1 -
-HBB_MANSP            -          sp|P02024|HBB_GORGO  -            1.4e-71  230.4   0.0   1.5e-71  230.3   0.0   1.0   1   0   0   1   1   1   1 -
-HBB_URSMA            -          sp|P02024|HBB_GORGO  -            5.9e-71  228.4   0.1   6.6e-71  228.2   0.1   1.0   1   0   0   1   1   1   1 -
-HBB_RABIT            -          sp|P02024|HBB_GORGO  -            5.8e-70  225.2   0.3   6.4e-70  225.0   0.3   1.0   1   0   0   1   1   1   1 -
-HBB_SUNMU            -          sp|P02024|HBB_GORGO  -              2e-69  223.4   0.0   2.2e-69  223.3   0.0   1.0   1   0   0   1   1   1   1 -
-HBB_CALAR            -          sp|P02024|HBB_GORGO  -            2.4e-69  223.1   0.1   2.7e-69  223.0   0.1   1.0   1   0   0   1   1   1   1 -
-HBB_EQUHE            -          sp|P02024|HBB_GORGO  -            3.4e-69  222.7   0.1   3.8e-69  222.5   0.1   1.0   1   0   0   1   1   1   1 -
-HBB_COLLI            -          sp|P02024|HBB_GORGO  -            4.2e-69  222.4   0.0   4.7e-69  222.2   0.0   1.0   1   0   0   1   1   1   1 -
-HBB_TACAC            -          sp|P02024|HBB_GORGO  -            7.3e-69  221.6   0.1   8.1e-69  221.4   0.1   1.0   1   0   0   1   1   1   1 -
-HBE_PONPY            -          sp|P02024|HBB_GORGO  -            1.3e-68  220.8   0.1   1.5e-68  220.6   0.1   1.0   1   0   0   1   1   1   1 -
-HBB_SPECI            -          sp|P02024|HBB_GORGO  -              3e-68  219.6   0.4   3.3e-68  219.5   0.4   1.0   1   0   0   1   1   1   1 -
-HBB_SPETO            -          sp|P02024|HBB_GORGO  -            5.3e-68  218.8   0.2   5.9e-68  218.7   0.2   1.0   1   0   0   1   1   1   1 -
-HBB_ORNAN            -          sp|P02024|HBB_GORGO  -            1.3e-67  217.5   0.0   1.5e-67  217.3   0.0   1.0   1   0   0   1   1   1   1 -
-HBB_TRIIN            -          sp|P02024|HBB_GORGO  -            1.4e-67  217.5   0.0   1.5e-67  217.3   0.0   1.0   1   0   0   1   1   1   1 -
-HBB_LARRI            -          sp|P02024|HBB_GORGO  -            2.5e-67  216.6   0.0   2.8e-67  216.5   0.0   1.0   1   0   0   1   1   1   1 -
-HBB_TUPGL            -          sp|P02024|HBB_GORGO  -            6.5e-66  212.0   0.0   7.2e-66  211.9   0.0   1.0   1   0   0   1   1   1   1 -
-HBB1_VAREX           -          sp|P02024|HBB_GORGO  -              6e-65  208.9   0.0   6.6e-65  208.8   0.0   1.0   1   0   0   1   1   1   1 -
-HBA_MESAU            -          sp|P02024|HBB_GORGO  -            1.9e-62  200.8   0.3   2.1e-62  200.6   0.3   1.0   1   0   0   1   1   1   1 -
-HBA_PONPY            -          sp|P02024|HBB_GORGO  -            1.9e-61  197.6   0.7   2.1e-61  197.4   0.7   1.0   1   0   0   1   1   1   1 -
-HBBL_RANCA           -          sp|P02024|HBB_GORGO  -            2.7e-61  197.0   0.1   3.1e-61  196.9   0.1   1.0   1   0   0   1   1   1   1 -
-HBA_MACFA            -          sp|P02024|HBB_GORGO  -            3.6e-61  196.6   0.3   4.1e-61  196.5   0.3   1.0   1   0   0   1   1   1   1 -
-HBA_MACSI            -          sp|P02024|HBB_GORGO  -            5.2e-61  196.1   0.2   5.8e-61  196.0   0.2   1.0   1   0   0   1   1   1   1 -
-HBA_AILME            -          sp|P02024|HBB_GORGO  -              9e-61  195.4   0.1     1e-60  195.2   0.1   1.0   1   0   0   1   1   1   1 -
-HBB2_XENTR           -          sp|P02024|HBB_GORGO  -            1.6e-60  194.6   0.4   1.8e-60  194.4   0.4   1.0   1   0   0   1   1   1   1 -
-HBA2_GALCR           -          sp|P02024|HBB_GORGO  -            2.7e-60  193.8   0.5     3e-60  193.7   0.5   1.0   1   0   0   1   1   1   1 -
-HBA_FRAPO            -          sp|P02024|HBB_GORGO  -              3e-60  193.7   0.4   3.3e-60  193.5   0.4   1.0   1   0   0   1   1   1   1 -
-HBA_PHACO            -          sp|P02024|HBB_GORGO  -              3e-60  193.7   0.4   3.4e-60  193.5   0.4   1.0   1   0   0   1   1   1   1 -
-HBA2_BOSMU           -          sp|P02024|HBB_GORGO  -            3.2e-60  193.6   0.3   3.5e-60  193.4   0.3   1.0   1   0   0   1   1   1   1 -
-HBA_ERIEU            -          sp|P02024|HBB_GORGO  -              1e-59  191.9   0.1   1.1e-59  191.8   0.1   1.0   1   0   0   1   1   1   1 -
-HBA_PROLO            -          sp|P02024|HBB_GORGO  -            1.4e-59  191.5   0.0   1.5e-59  191.4   0.0   1.0   1   0   0   1   1   1   1 -
-HBA_ANSSE            -          sp|P02024|HBB_GORGO  -            1.6e-59  191.3   0.4   1.8e-59  191.1   0.4   1.0   1   0   0   1   1   1   1 -
-HBA_PAGLA            -          sp|P02024|HBB_GORGO  -            1.7e-59  191.2   0.5   1.9e-59  191.1   0.5   1.0   1   0   0   1   1   1   1 -
-HBA_TRIOC            -          sp|P02024|HBB_GORGO  -            1.1e-58  188.6   0.5   1.2e-58  188.4   0.5   1.0   1   0   0   1   1   1   1 -
-HBAD_CHLME           -          sp|P02024|HBB_GORGO  -            2.9e-58  187.2   0.6   3.2e-58  187.1   0.6   1.0   1   0   0   1   1   1   1 -
-HBAZ_HORSE           -          sp|P02024|HBB_GORGO  -            3.4e-58  187.0   0.1   3.8e-58  186.9   0.1   1.0   1   0   0   1   1   1   1 -
-HBA_COLLI            -          sp|P02024|HBB_GORGO  -            6.7e-58  186.1   0.2   7.4e-58  185.9   0.2   1.0   1   0   0   1   1   1   1 -
-HBAD_PASMO           -          sp|P02024|HBB_GORGO  -            8.9e-58  185.7   0.1   9.9e-58  185.5   0.1   1.0   1   0   0   1   1   1   1 -
-MYG_LYCPI            -          sp|P02024|HBB_GORGO  -            1.1e-56  182.1   1.9   1.3e-56  181.9   1.9   1.0   1   0   0   1   1   1   1 -
-MYG_SAISC            -          sp|P02024|HBB_GORGO  -            1.1e-56  182.1   1.1   1.3e-56  181.9   1.1   1.0   1   0   0   1   1   1   1 -
-MYG_ESCGI            -          sp|P02024|HBB_GORGO  -            2.5e-56  181.0   1.7   2.8e-56  180.8   1.7   1.0   1   0   0   1   1   1   1 -
-MYG_PROGU            -          sp|P02024|HBB_GORGO  -            3.2e-56  180.6   0.2   3.6e-56  180.4   0.2   1.0   1   0   0   1   1   1   1 -
-MYG_HORSE            -          sp|P02024|HBB_GORGO  -            9.5e-56  179.1   1.0   1.1e-55  178.9   1.0   1.0   1   0   0   1   1   1   1 -
-MYG_MOUSE            -          sp|P02024|HBB_GORGO  -            1.8e-55  178.2   0.3     2e-55  178.0   0.3   1.0   1   0   0   1   1   1   1 -
-HBA4_SALIR           -          sp|P02024|HBB_GORGO  -            3.4e-55  177.3   0.1   3.8e-55  177.1   0.1   1.0   1   0   0   1   1   1   1 -
-HBB2_TRICR           -          sp|P02024|HBB_GORGO  -            1.8e-53  171.7   0.0     2e-53  171.6   0.0   1.0   1   0   0   1   1   1   1 -
-MYG_MUSAN            -          sp|P02024|HBB_GORGO  -              1e-44  143.3   0.3   1.1e-44  143.2   0.3   1.0   1   0   0   1   1   1   1 -
+HBB_MANSP            -          sp|P02185|MYG_PHYCD  -            1.5e-69  224.0   0.1   1.7e-69  223.9   0.1   1.0   1   0   0   1   1   1   1 -
+HBB_URSMA            -          sp|P02185|MYG_PHYCD  -            4.6e-69  222.5   0.2     5e-69  222.3   0.2   1.0   1   0   0   1   1   1   1 -
+HBB_RABIT            -          sp|P02185|MYG_PHYCD  -            2.5e-68  220.1   0.6   2.7e-68  220.0   0.6   1.0   1   0   0   1   1   1   1 -
+HBB_SUNMU            -          sp|P02185|MYG_PHYCD  -            7.6e-68  218.5   0.0   8.3e-68  218.4   0.0   1.0   1   0   0   1   1   1   1 -
+HBB_COLLI            -          sp|P02185|MYG_PHYCD  -            9.5e-68  218.2   0.0   1.1e-67  217.9   0.0   1.0   1   0   0   1   1   1   1 -
+HBB_EQUHE            -          sp|P02185|MYG_PHYCD  -            1.4e-67  217.6   0.1   1.6e-67  217.5   0.1   1.0   1   0   0   1   1   1   1 -
+HBB_TACAC            -          sp|P02185|MYG_PHYCD  -            1.5e-67  217.6   0.3   1.6e-67  217.4   0.3   1.0   1   0   0   1   1   1   1 -
+HBB_SPECI            -          sp|P02185|MYG_PHYCD  -            3.3e-67  216.5   0.7   3.6e-67  216.3   0.7   1.0   1   0   0   1   1   1   1 -
+HBB_CALAR            -          sp|P02185|MYG_PHYCD  -            3.4e-67  216.4   0.1   3.8e-67  216.3   0.1   1.0   1   0   0   1   1   1   1 -
+HBB_SPETO            -          sp|P02185|MYG_PHYCD  -            3.7e-67  216.3   0.4   4.1e-67  216.1   0.4   1.0   1   0   0   1   1   1   1 -
+HBB_ORNAN            -          sp|P02185|MYG_PHYCD  -            6.6e-67  215.5   0.0   7.2e-67  215.3   0.0   1.0   1   0   0   1   1   1   1 -
+HBE_PONPY            -          sp|P02185|MYG_PHYCD  -            8.4e-67  215.1   0.3   9.2e-67  215.0   0.3   1.0   1   0   0   1   1   1   1 -
+MYG_ESCGI            -          sp|P02185|MYG_PHYCD  -            2.3e-66  213.7   1.7   2.6e-66  213.5   1.7   1.0   1   0   0   1   1   1   1 -
+HBB_TRIIN            -          sp|P02185|MYG_PHYCD  -            2.9e-66  213.4   0.1   3.2e-66  213.2   0.1   1.0   1   0   0   1   1   1   1 -
+HBB_LARRI            -          sp|P02185|MYG_PHYCD  -            5.3e-66  212.5   0.0   6.4e-66  212.3   0.0   1.0   1   0   0   1   1   1   1 -
+MYG_LYCPI            -          sp|P02185|MYG_PHYCD  -            8.7e-66  211.8   1.6   9.6e-66  211.7   1.6   1.0   1   0   0   1   1   1   1 -
+MYG_PROGU            -          sp|P02185|MYG_PHYCD  -            1.8e-65  210.8   0.2     2e-65  210.6   0.2   1.0   1   0   0   1   1   1   1 -
+MYG_SAISC            -          sp|P02185|MYG_PHYCD  -            2.5e-65  210.3   0.9   2.8e-65  210.2   0.9   1.0   1   0   0   1   1   1   1 -
+MYG_HORSE            -          sp|P02185|MYG_PHYCD  -            2.6e-65  210.3   0.8   2.9e-65  210.1   0.8   1.0   1   0   0   1   1   1   1 -
+HBA_MESAU            -          sp|P02185|MYG_PHYCD  -            9.1e-65  208.5   0.2     1e-64  208.4   0.2   1.0   1   0   0   1   1   1   1 -
+MYG_MOUSE            -          sp|P02185|MYG_PHYCD  -            1.3e-64  208.0   0.3   1.4e-64  207.9   0.3   1.0   1   0   0   1   1   1   1 -
+HBB_TUPGL            -          sp|P02185|MYG_PHYCD  -            1.5e-64  207.8   0.0   1.7e-64  207.6   0.0   1.0   1   0   0   1   1   1   1 -
+HBA_PONPY            -          sp|P02185|MYG_PHYCD  -            1.3e-63  204.7   0.5   1.5e-63  204.6   0.5   1.0   1   0   0   1   1   1   1 -
+HBA_MACFA            -          sp|P02185|MYG_PHYCD  -            2.9e-63  203.6   0.2   3.2e-63  203.5   0.2   1.0   1   0   0   1   1   1   1 -
+HBA_MACSI            -          sp|P02185|MYG_PHYCD  -              4e-63  203.2   0.2   4.4e-63  203.0   0.2   1.0   1   0   0   1   1   1   1 -
+HBB1_VAREX           -          sp|P02185|MYG_PHYCD  -              5e-63  202.9   0.1   5.9e-63  202.6   0.1   1.0   1   0   0   1   1   1   1 -
+HBA_AILME            -          sp|P02185|MYG_PHYCD  -            5.7e-63  202.7   0.1   6.4e-63  202.5   0.1   1.0   1   0   0   1   1   1   1 -
+HBA2_BOSMU           -          sp|P02185|MYG_PHYCD  -            8.6e-63  202.1   0.3   9.6e-63  201.9   0.3   1.0   1   0   0   1   1   1   1 -
+HBA_FRAPO            -          sp|P02185|MYG_PHYCD  -            1.8e-62  201.0   0.3     2e-62  200.9   0.3   1.0   1   0   0   1   1   1   1 -
+HBA2_GALCR           -          sp|P02185|MYG_PHYCD  -            1.9e-62  201.0   0.4   2.1e-62  200.8   0.4   1.0   1   0   0   1   1   1   1 -
+HBA_PHACO            -          sp|P02185|MYG_PHYCD  -            2.1e-62  200.8   0.3   2.4e-62  200.7   0.3   1.0   1   0   0   1   1   1   1 -
+HBA_ANSSE            -          sp|P02185|MYG_PHYCD  -              4e-62  199.9   0.3   4.4e-62  199.8   0.3   1.0   1   0   0   1   1   1   1 -
+HBA_ERIEU            -          sp|P02185|MYG_PHYCD  -              4e-62  199.9   0.1   4.5e-62  199.8   0.1   1.0   1   0   0   1   1   1   1 -
+HBA_PAGLA            -          sp|P02185|MYG_PHYCD  -            8.3e-62  198.9   0.3   9.2e-62  198.8   0.3   1.0   1   0   0   1   1   1   1 -
+HBA_PROLO            -          sp|P02185|MYG_PHYCD  -            9.5e-62  198.7   0.0   1.1e-61  198.6   0.0   1.0   1   0   0   1   1   1   1 -
+HBA_TRIOC            -          sp|P02185|MYG_PHYCD  -            2.2e-61  197.5   0.4   2.4e-61  197.4   0.4   1.0   1   0   0   1   1   1   1 -
+HBAD_CHLME           -          sp|P02185|MYG_PHYCD  -            1.2e-60  195.1   0.5   1.3e-60  195.0   0.5   1.0   1   0   0   1   1   1   1 -
+HBAZ_HORSE           -          sp|P02185|MYG_PHYCD  -            4.1e-60  193.4   0.1   4.5e-60  193.3   0.1   1.0   1   0   0   1   1   1   1 -
+HBA_COLLI            -          sp|P02185|MYG_PHYCD  -              6e-60  192.9   0.2   6.7e-60  192.7   0.2   1.0   1   0   0   1   1   1   1 -
+HBBL_RANCA           -          sp|P02185|MYG_PHYCD  -            1.7e-59  191.4   0.2     2e-59  191.2   0.2   1.0   1   0   0   1   1   1   1 -
+HBAD_PASMO           -          sp|P02185|MYG_PHYCD  -            2.2e-59  191.0   0.1   2.4e-59  190.9   0.1   1.0   1   0   0   1   1   1   1 -
+HBB2_XENTR           -          sp|P02185|MYG_PHYCD  -            1.1e-58  188.8   0.6   1.3e-58  188.6   0.6   1.0   1   0   0   1   1   1   1 -
+HBA4_SALIR           -          sp|P02185|MYG_PHYCD  -            5.3e-56  180.0   0.1   5.9e-56  179.9   0.1   1.0   1   0   0   1   1   1   1 -
+MYG_MUSAN            -          sp|P02185|MYG_PHYCD  -            2.5e-54  174.6   0.4   2.8e-54  174.5   0.4   1.0   1   0   0   1   1   1   1 -
+HBB2_TRICR           -          sp|P02185|MYG_PHYCD  -              2e-52  168.4   0.0   2.2e-52  168.3   0.0   1.0   1   0   0   1   1   1   1 -
+HBB_MANSP            -          sp|P02024|HBB_GORGO  -            3.6e-74  238.9   0.1     4e-74  238.8   0.1   1.0   1   0   0   1   1   1   1 -
+HBB_URSMA            -          sp|P02024|HBB_GORGO  -            1.7e-73  236.7   0.3   1.9e-73  236.6   0.3   1.0   1   0   0   1   1   1   1 -
+HBB_RABIT            -          sp|P02024|HBB_GORGO  -            2.2e-72  233.1   0.8   2.4e-72  233.0   0.8   1.0   1   0   0   1   1   1   1 -
+HBB_SUNMU            -          sp|P02024|HBB_GORGO  -            5.4e-72  231.8   0.1     6e-72  231.7   0.1   1.0   1   0   0   1   1   1   1 -
+HBB_CALAR            -          sp|P02024|HBB_GORGO  -              7e-72  231.5   0.2   7.7e-72  231.3   0.2   1.0   1   0   0   1   1   1   1 -
+HBB_COLLI            -          sp|P02024|HBB_GORGO  -            9.6e-72  231.0   0.0   1.1e-71  230.9   0.0   1.0   1   0   0   1   1   1   1 -
+HBB_TACAC            -          sp|P02024|HBB_GORGO  -            2.5e-71  229.7   0.4   2.8e-71  229.6   0.4   1.0   1   0   0   1   1   1   1 -
+HBE_PONPY            -          sp|P02024|HBB_GORGO  -            4.8e-71  228.8   0.4   5.3e-71  228.6   0.4   1.0   1   0   0   1   1   1   1 -
+HBB_EQUHE            -          sp|P02024|HBB_GORGO  -            5.1e-71  228.7   0.2   5.7e-71  228.5   0.2   1.0   1   0   0   1   1   1   1 -
+HBB_SPECI            -          sp|P02024|HBB_GORGO  -            1.3e-70  227.3   1.0   1.5e-70  227.2   1.0   1.0   1   0   0   1   1   1   1 -
+HBB_SPETO            -          sp|P02024|HBB_GORGO  -              2e-70  226.8   0.6   2.2e-70  226.6   0.6   1.0   1   0   0   1   1   1   1 -
+HBB_TRIIN            -          sp|P02024|HBB_GORGO  -            3.7e-70  225.9   0.1   4.1e-70  225.8   0.1   1.0   1   0   0   1   1   1   1 -
+HBB_ORNAN            -          sp|P02024|HBB_GORGO  -            4.1e-70  225.7   0.0   4.6e-70  225.6   0.0   1.0   1   0   0   1   1   1   1 -
+HBB_LARRI            -          sp|P02024|HBB_GORGO  -            5.7e-70  225.3   0.0   6.4e-70  225.1   0.0   1.0   1   0   0   1   1   1   1 -
+HBB_TUPGL            -          sp|P02024|HBB_GORGO  -            1.8e-68  220.5   0.0   1.9e-68  220.3   0.0   1.0   1   0   0   1   1   1   1 -
+HBB1_VAREX           -          sp|P02024|HBB_GORGO  -            1.5e-67  217.4   0.1   1.7e-67  217.3   0.1   1.0   1   0   0   1   1   1   1 -
+HBBL_RANCA           -          sp|P02024|HBB_GORGO  -            7.8e-64  205.4   0.3   8.7e-64  205.2   0.3   1.0   1   0   0   1   1   1   1 -
+HBA_MESAU            -          sp|P02024|HBB_GORGO  -            4.5e-63  202.9   0.3     5e-63  202.8   0.3   1.0   1   0   0   1   1   1   1 -
+HBB2_XENTR           -          sp|P02024|HBB_GORGO  -              2e-62  200.8   0.8   2.3e-62  200.6   0.8   1.0   1   0   0   1   1   1   1 -
+HBA_PONPY            -          sp|P02024|HBB_GORGO  -            4.6e-62  199.6   0.7     5e-62  199.5   0.7   1.0   1   0   0   1   1   1   1 -
+HBA_MACFA            -          sp|P02024|HBB_GORGO  -            8.7e-62  198.7   0.3   9.6e-62  198.6   0.3   1.0   1   0   0   1   1   1   1 -
+HBA_MACSI            -          sp|P02024|HBB_GORGO  -            1.3e-61  198.2   0.3   1.4e-61  198.1   0.3   1.0   1   0   0   1   1   1   1 -
+HBA_AILME            -          sp|P02024|HBB_GORGO  -            2.1e-61  197.5   0.1   2.4e-61  197.3   0.1   1.0   1   0   0   1   1   1   1 -
+HBA2_GALCR           -          sp|P02024|HBB_GORGO  -            6.6e-61  195.9   0.6   7.3e-61  195.7   0.6   1.0   1   0   0   1   1   1   1 -
+HBA_FRAPO            -          sp|P02024|HBB_GORGO  -            7.1e-61  195.8   0.4   7.8e-61  195.7   0.4   1.0   1   0   0   1   1   1   1 -
+HBA_PHACO            -          sp|P02024|HBB_GORGO  -            7.3e-61  195.7   0.4     8e-61  195.6   0.4   1.0   1   0   0   1   1   1   1 -
+HBA2_BOSMU           -          sp|P02024|HBB_GORGO  -            7.6e-61  195.7   0.4   8.3e-61  195.6   0.4   1.0   1   0   0   1   1   1   1 -
+HBA_ERIEU            -          sp|P02024|HBB_GORGO  -            2.4e-60  194.0   0.1   2.7e-60  193.9   0.1   1.0   1   0   0   1   1   1   1 -
+HBA_PROLO            -          sp|P02024|HBB_GORGO  -            3.3e-60  193.6   0.0   3.6e-60  193.5   0.0   1.0   1   0   0   1   1   1   1 -
+HBA_ANSSE            -          sp|P02024|HBB_GORGO  -            3.9e-60  193.4   0.4   4.3e-60  193.2   0.4   1.0   1   0   0   1   1   1   1 -
+HBA_PAGLA            -          sp|P02024|HBB_GORGO  -            4.1e-60  193.3   0.5   4.5e-60  193.2   0.5   1.0   1   0   0   1   1   1   1 -
+HBA_TRIOC            -          sp|P02024|HBB_GORGO  -            2.7e-59  190.7   0.5   2.9e-59  190.5   0.5   1.0   1   0   0   1   1   1   1 -
+HBAD_CHLME           -          sp|P02024|HBB_GORGO  -            6.3e-59  189.4   0.5     7e-59  189.3   0.5   1.0   1   0   0   1   1   1   1 -
+HBAZ_HORSE           -          sp|P02024|HBB_GORGO  -            7.5e-59  189.2   0.1   8.2e-59  189.1   0.1   1.0   1   0   0   1   1   1   1 -
+HBA_COLLI            -          sp|P02024|HBB_GORGO  -            1.6e-58  188.1   0.2   1.8e-58  188.0   0.2   1.0   1   0   0   1   1   1   1 -
+HBAD_PASMO           -          sp|P02024|HBB_GORGO  -              2e-58  187.8   0.1   2.2e-58  187.7   0.1   1.0   1   0   0   1   1   1   1 -
+MYG_SAISC            -          sp|P02024|HBB_GORGO  -            2.9e-57  184.1   1.0   3.2e-57  183.9   1.0   1.0   1   0   0   1   1   1   1 -
+MYG_LYCPI            -          sp|P02024|HBB_GORGO  -              3e-57  184.0   1.9   3.3e-57  183.9   1.9   1.0   1   0   0   1   1   1   1 -
+MYG_PROGU            -          sp|P02024|HBB_GORGO  -            8.3e-57  182.6   0.2   9.2e-57  182.4   0.2   1.0   1   0   0   1   1   1   1 -
+MYG_ESCGI            -          sp|P02024|HBB_GORGO  -            8.8e-57  182.5   2.3   9.7e-57  182.4   2.3   1.0   1   0   0   1   1   1   1 -
+MYG_HORSE            -          sp|P02024|HBB_GORGO  -            2.5e-56  181.0   1.0   2.7e-56  180.9   1.0   1.0   1   0   0   1   1   1   1 -
+MYG_MOUSE            -          sp|P02024|HBB_GORGO  -            4.7e-56  180.1   0.3   5.2e-56  180.0   0.3   1.0   1   0   0   1   1   1   1 -
+HBA4_SALIR           -          sp|P02024|HBB_GORGO  -            7.5e-56  179.5   0.1   8.3e-56  179.3   0.1   1.0   1   0   0   1   1   1   1 -
+HBB2_TRICR           -          sp|P02024|HBB_GORGO  -            2.7e-55  177.7   0.0     3e-55  177.5   0.0   1.0   1   0   0   1   1   1   1 -
+MYG_MUSAN            -          sp|P02024|HBB_GORGO  -            4.6e-45  144.5   0.3   5.1e-45  144.3   0.3   1.0   1   0   0   1   1   1   1 -
 #
 # Program:         jackhmmer
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SEARCH
-# Query file:      /tmp/tmphb1nFG/files/000/dataset_1.dat
-# Target file:     /tmp/tmphb1nFG/files/000/dataset_2.dat
-# Option settings: jackhmmer -N 5 --tblout /tmp/tmphb1nFG/files/000/dataset_4.dat --domtblout /tmp/tmphb1nFG/files/000/dataset_5.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --fast --hand --symfrac 0.5 --wpb --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmphb1nFG/files/000/dataset_1.dat /tmp/tmphb1nFG/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmphb1nFG/job_working_directory/000/3
-# Date:            Sat Jun 25 19:33:04 2016
+# Query file:      /tmp/tmpw5_nj0/files/000/dataset_1.dat
+# Target file:     /tmp/tmpw5_nj0/files/000/dataset_2.dat
+# Option settings: jackhmmer -N 5 --tblout /tmp/tmpw5_nj0/files/000/dataset_4.dat --domtblout /tmp/tmpw5_nj0/files/000/dataset_5.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --wpb --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmpw5_nj0/files/000/dataset_1.dat /tmp/tmpw5_nj0/files/000/dataset_2.dat 
+# Current dir:     /tmp/tmpw5_nj0/job_working_directory/000/3/working
+# Date:            Mon Jun 11 17:59:06 2018
 # [ok]
--- a/test-data/nhmmer.out	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/nhmmer.out	Mon Jun 11 15:52:05 2018 -0400
@@ -1,11 +1,11 @@
-# nhmmer :: search a DNA model or alignment against a DNA database
-# HMMER 3.1b2 (February 2015); http://hmmer.org/
-# Copyright (C) 2015 Howard Hughes Medical Institute.
-# Freely distributed under the GNU General Public License (GPLv3).
+# nhmmer :: search a DNA model, alignment, or sequence against a DNA database
+# HMMER 3.2 (June 2018); http://hmmer.org/
+# Copyright (C) 2018 Howard Hughes Medical Institute.
+# Freely distributed under the BSD open source license.
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-# query file:                      /tmp/tmpprnvgs/files/000/dataset_1.dat
-# target sequence database:        /tmp/tmpprnvgs/files/000/dataset_2.dat
-# hits tabular output:             /tmp/tmpprnvgs/files/000/dataset_4.dat
+# query file:                      /tmp/tmpp4O0Ju/files/000/dataset_36.dat
+# target sequence database:        /tmp/tmpp4O0Ju/files/000/dataset_37.dat
+# hits tabular output:             /tmp/tmpp4O0Ju/files/000/dataset_39.dat
 # hits output in Dfam format:      None
 # max ASCII text line length:      unlimited
 # SSV filter P threshold:       <= 0.02
@@ -22,35 +22,35 @@
 Scores for complete hits:
     E-value  score  bias  Sequence                       start    end  Description
     ------- ------ -----  --------                       -----  -----  -----------
-    1.2e-10   38.6   7.4  humanchr1/239220001-239550000 302390 302466  
-    7.8e-08   29.6   8.3  humanchr1/239220001-239550000 174456 174498  
-    1.2e-07   28.9   6.0  humanchr1/239220001-239550000 302466 302390  
-    7.2e-06   23.3   7.0  humanchr1/239220001-239550000 174493 174456  
+    8.7e-11   39.2   7.4  humanchr1/239220001-239550000 302390 302466 
+    6.4e-08   30.0   8.3  humanchr1/239220001-239550000 174456 174498 
+    9.3e-08   29.5   6.1  humanchr1/239220001-239550000 302466 302390 
+    6.3e-06   23.7   7.0  humanchr1/239220001-239550000 174493 174456 
   ------ inclusion threshold ------
-        1.4    6.3   7.0  humanchr1/239220001-239550000 304073 304104  
+        1.4    6.5   7.0  humanchr1/239220001-239550000 304073 304104 
 
 
 Annotation for each hit  (and alignments):
 >> humanchr1/239220001-239550000  
     score  bias    Evalue   hmmfrom    hmm to     alifrom    ali to      envfrom    env to       sq len      acc
    ------ ----- ---------   -------   -------    --------- ---------    --------- ---------    ---------    ----
- !   38.6   7.4   1.2e-10         4        80 .]    302390    302466 ..    302387    302466 ..    330000    0.87
+ !   39.2   7.4   8.7e-11         4        80 .]    302390    302466 ..    302387    302466 ..    330000    0.87
 
   Alignment:
-  score: 38.6 bits
+  score: 39.2 bits
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
                           MADE1      4 ggttggtgcaaaagtaattgcggtttttgccattacttttaatggc....aaaaaccgcaattacttttgcaccaacctaa 80    
-                                       ggt ggtgcaaaa  aattg ggtttttgccatt cttttaat gc    a aaa  g a  t ctttt caccaa ctaa
-  humanchr1/239220001-239550000 302390 GGTCGGTGCAAAATCAATTGTGGTTTTTGCCATTGCTTTTAATTGCttttA-AAA--GTA-ATGCTTTTACACCAATCTAA 302466
-                                       899******************************************955533.443..334.4689***********99986 PP
+                                       ggt ggtgcaaaa  aattg ggtttttgccatt cttttaat gc    a aaa  g  a t ctttt caccaa ctaa
+  humanchr1/239220001-239550000 302390 GGTCGGTGCAAAATCAATTGTGGTTTTTGCCATTGCTTTTAATTGCttttA-AAA--GT-AATGCTTTTACACCAATCTAA 302466
+                                       899******************************************955533.443..33.44689************9986 PP
 
 >> humanchr1/239220001-239550000  
     score  bias    Evalue   hmmfrom    hmm to     alifrom    ali to      envfrom    env to       sq len      acc
    ------ ----- ---------   -------   -------    --------- ---------    --------- ---------    ---------    ----
- !   29.6   8.3   7.8e-08         1        43 [.    174456    174498 ..    174456    174518 ..    330000    0.92
+ !   30.0   8.3   6.4e-08         1        43 [.    174456    174498 ..    174456    174518 ..    330000    0.92
 
   Alignment:
-  score: 29.6 bits
+  score: 30.0 bits
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
                           MADE1      1 ttaggttggtgcaaaagtaattgcggtttttgccattactttt 43    
                                        ttaggtt gtgcaaaagtaattg ggtttttg cattactttt
@@ -60,36 +60,36 @@
 >> humanchr1/239220001-239550000  
     score  bias    Evalue   hmmfrom    hmm to     alifrom    ali to      envfrom    env to       sq len      acc
    ------ ----- ---------   -------   -------    --------- ---------    --------- ---------    ---------    ----
- !   28.9   6.0   1.2e-07         1        77 [.    302466    302390 ..    302466    302387 ..    330000    0.74
+ !   29.5   6.1   9.3e-08         1        77 [.    302466    302390 ..    302466    302387 ..    330000    0.74
 
   Alignment:
-  score: 28.9 bits
+  score: 29.5 bits
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
                           MADE1      1 ttaggttggtgcaaaagtaattgcggtttttgccattactttt................aatggcaaaaaccgcaattacttttgcaccaacc 77    
                                        ttag ttggtg aaaag                cattactttt                aatggcaaaaacc caatt  ttttgcacc acc
   humanchr1/239220001-239550000 302466 TTAGATTGGTGTAAAAG----------------CATTACTTTTaaaagcaattaaaagcAATGGCAAAAACCACAATTGATTTTGCACCGACC 302390
-                                       68999999999999998................5666777776222222222222222268****************************9998 PP
+                                       68999999999999998................4666777765222222222222222268****************************9998 PP
 
 >> humanchr1/239220001-239550000  
     score  bias    Evalue   hmmfrom    hmm to     alifrom    ali to      envfrom    env to       sq len      acc
    ------ ----- ---------   -------   -------    --------- ---------    --------- ---------    ---------    ----
- !   23.3   7.0   7.2e-06        43        80 .]    174493    174456 ..    174513    174456 ..    330000    0.91
+ !   23.7   7.0   6.3e-06        43        80 .]    174493    174456 ..    174513    174456 ..    330000    0.91
 
   Alignment:
-  score: 23.3 bits
+  score: 23.7 bits
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
                           MADE1     43 taatggcaaaaaccgcaattacttttgcaccaacctaa 80    
                                        taatg caaaaacc caattacttttgcac aacctaa
   humanchr1/239220001-239550000 174493 TAATGACAAAAACCACAATTACTTTTGCACTAACCTAA 174456
-                                       689********************************985 PP
+                                       689********************************986 PP
 
 >> humanchr1/239220001-239550000  
     score  bias    Evalue   hmmfrom    hmm to     alifrom    ali to      envfrom    env to       sq len      acc
    ------ ----- ---------   -------   -------    --------- ---------    --------- ---------    ---------    ----
- ?    6.3   7.0       1.4        41        72 ..    304073    304104 ..    304053    304109 ..    330000    0.85
+ ?    6.5   7.0       1.4        41        72 ..    304073    304104 ..    304053    304109 ..    330000    0.85
 
   Alignment:
-  score: 6.3 bits
+  score: 6.5 bits
                                        xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
                           MADE1     41 tttaatggcaaaaaccgcaattacttttgcac 72    
                                        tt a tgg aaaaa   ca tta ttttgca 
@@ -100,14 +100,14 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (80 nodes)
-Target sequences:                            1  (660000 residues searched)
-Residues passing SSV filter:             61794  (0.0936); expected (0.02)
-Residues passing bias filter:            46199  (0.07); expected (0.02)
-Residues passing Vit filter:              2752  (0.00417); expected (0.001)
-Residues passing Fwd filter:              2526  (0.00383); expected (1e-05)
-Total number of hits:                        5  (0.000405)
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1760.00
+Query model(s):                            1  (80 nodes)
+Target sequences:                          1  (660000 residues searched)
+Residues passing SSV filter:           63737  (0.0966); expected (0.02)
+Residues passing bias filter:          44695  (0.0677); expected (0.02)
+Residues passing Vit filter:            2309  (0.0035); expected (0.001)
+Residues passing Fwd filter:            2041  (0.00309); expected (1e-05)
+Total number of hits:                      5  (0.000405)
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1854.66
 //
 [ok]
--- a/test-data/nhmmer.out.dfamtblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/nhmmer.out.dfamtblout	Mon Jun 11 15:52:05 2018 -0400
@@ -1,17 +1,17 @@
 # target name                 accession  query name           accession   hmmfrom hmm to alifrom  ali to envfrom  env to  sq len strand   E-value  score  bias  description of target
 #         ------------------- ---------- --------------------  ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- ---------------------
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2       4      80  302390  302466  302387  302466  330000    +     1.2e-10   38.6   7.4  -
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2       1      43  174456  174498  174456  174518  330000    +     7.8e-08   29.6   8.3  -
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2       1      77  302466  302390  302466  302387  330000    -     1.2e-07   28.9   6.0  -
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2      43      80  174493  174456  174513  174456  330000    -     7.2e-06   23.3   7.0  -
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2      41      72  304073  304104  304053  304109  330000    +         1.4    6.3   7.0  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2       4      80  302390  302466  302387  302466  330000    +     8.7e-11   39.2   7.4  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2       1      43  174456  174498  174456  174518  330000    +     6.4e-08   30.0   8.3  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2       1      77  302466  302390  302466  302387  330000    -     9.3e-08   29.5   6.1  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2      43      80  174493  174456  174513  174456  330000    -     6.3e-06   23.7   7.0  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2      41      72  304073  304104  304053  304109  330000    +         1.4    6.5   7.0  -
 #
 # Program:         nhmmer
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SEARCH
-# Query file:      /tmp/tmpnpsbd_6p/files/000/dataset_1.dat
-# Target file:     /tmp/tmpnpsbd_6p/files/000/dataset_2.dat
-# Option settings: nhmmer --tblout /tmp/tmpnpsbd_6p/files/000/dataset_4.dat --dfamtblout None --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --dna --seed 4 --cpu 1 /tmp/tmpnpsbd_6p/files/000/dataset_1.dat /tmp/tmpnpsbd_6p/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmpnpsbd_6p/job_working_directory/000/3/working
-# Date:            Fri Apr  6 16:39:46 2018
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_36.dat
+# Target file:     /tmp/tmpp4O0Ju/files/000/dataset_37.dat
+# Option settings: nhmmer --tblout /tmp/tmpp4O0Ju/files/000/dataset_39.dat --dfamtblout None --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --dna --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_36.dat /tmp/tmpp4O0Ju/files/000/dataset_37.dat 
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/30/working
+# Date:            Fri Jun  8 12:18:56 2018
 # [ok]
--- a/test-data/nhmmer.out.tblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/nhmmer.out.tblout	Mon Jun 11 15:52:05 2018 -0400
@@ -1,17 +1,17 @@
 # target name                 accession  query name           accession   hmmfrom hmm to alifrom  ali to envfrom  env to  sq len strand   E-value  score  bias  description of target
 #         ------------------- ---------- --------------------  ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- ---------------------
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2       4      80  302390  302466  302387  302466  330000    +     1.2e-10   38.6   7.4  -
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2       1      43  174456  174498  174456  174518  330000    +     7.8e-08   29.6   8.3  -
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2       1      77  302466  302390  302466  302387  330000    -     1.2e-07   28.9   6.0  -
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2      43      80  174493  174456  174513  174456  330000    -     7.2e-06   23.3   7.0  -
-humanchr1/239220001-239550000 -          MADE1                DF0000629.2      41      72  304073  304104  304053  304109  330000    +         1.4    6.3   7.0  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2       4      80  302390  302466  302387  302466  330000    +     8.7e-11   39.2   7.4  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2       1      43  174456  174498  174456  174518  330000    +     6.4e-08   30.0   8.3  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2       1      77  302466  302390  302466  302387  330000    -     9.3e-08   29.5   6.1  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2      43      80  174493  174456  174513  174456  330000    -     6.3e-06   23.7   7.0  -
+humanchr1/239220001-239550000 -          MADE1                DF0000629.2      41      72  304073  304104  304053  304109  330000    +         1.4    6.5   7.0  -
 #
 # Program:         nhmmer
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SEARCH
-# Query file:      /tmp/tmpnpsbd_6p/files/000/dataset_1.dat
-# Target file:     /tmp/tmpnpsbd_6p/files/000/dataset_2.dat
-# Option settings: nhmmer --tblout /tmp/tmpnpsbd_6p/files/000/dataset_4.dat --dfamtblout None --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --dna --seed 4 --cpu 1 /tmp/tmpnpsbd_6p/files/000/dataset_1.dat /tmp/tmpnpsbd_6p/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmpnpsbd_6p/job_working_directory/000/3/working
-# Date:            Fri Apr  6 16:39:46 2018
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_36.dat
+# Target file:     /tmp/tmpp4O0Ju/files/000/dataset_37.dat
+# Option settings: nhmmer --tblout /tmp/tmpp4O0Ju/files/000/dataset_39.dat --dfamtblout None --notextw -E 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --dna --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_36.dat /tmp/tmpp4O0Ju/files/000/dataset_37.dat 
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/30/working
+# Date:            Fri Jun  8 12:18:56 2018
 # [ok]
--- a/test-data/phmmer.domtblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/phmmer.domtblout	Mon Jun 11 15:52:05 2018 -0400
@@ -92,11 +92,11 @@
 sp|P02024|HBB_GORGO  -            147 HBB2_TRICR           -            145   2.7e-46  144.3   0.0   1   1   1.5e-46     3e-46  144.1   0.0     1   145     2   146     2   146 0.98 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
 #
 # Program:         phmmer
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SEARCH
-# Query file:      /tmp/tmpqKBUss/files/000/dataset_1.dat
-# Target file:     /tmp/tmpqKBUss/files/000/dataset_2.dat
-# Option settings: phmmer --tblout /tmp/tmpqKBUss/files/000/dataset_4.dat --domtblout /tmp/tmpqKBUss/files/000/dataset_5.dat --pfamtblout /tmp/tmpqKBUss/files/000/dataset_6.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmpqKBUss/files/000/dataset_1.dat /tmp/tmpqKBUss/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmpqKBUss/job_working_directory/000/3
-# Date:            Sat Jun 25 19:48:26 2016
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_45.dat
+# Target file:     /tmp/tmpp4O0Ju/files/000/dataset_46.dat
+# Option settings: phmmer --tblout /tmp/tmpp4O0Ju/files/000/dataset_48.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_49.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_50.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_45.dat /tmp/tmpp4O0Ju/files/000/dataset_46.dat 
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/36/working
+# Date:            Fri Jun  8 12:19:38 2018
 # [ok]
--- a/test-data/phmmer.out	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/phmmer.out	Mon Jun 11 15:52:05 2018 -0400
@@ -1,18 +1,18 @@
 # phmmer :: search a protein sequence against a protein database
-# HMMER 3.1b1 (May 2013); http://hmmer.org/
-# Copyright (C) 2013 Howard Hughes Medical Institute.
-# Freely distributed under the GNU General Public License (GPLv3).
+# HMMER 3.2 (June 2018); http://hmmer.org/
+# Copyright (C) 2018 Howard Hughes Medical Institute.
+# Freely distributed under the BSD open source license.
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-# query sequence file:             test-data/globins45.fa
-# target sequence database:        test-data/uniprot_matches.fasta
-# per-seq hits tabular output:     test-data/phmmer.tblout
-# per-dom hits tabular output:     test-data/phmmer.domtblout
-# pfam-style tabular hit output:   test-data/phmmer.pfamtblout
+# query sequence file:             /tmp/tmpp4O0Ju/files/000/dataset_45.dat
+# target sequence database:        /tmp/tmpp4O0Ju/files/000/dataset_46.dat
+# per-seq hits tabular output:     /tmp/tmpp4O0Ju/files/000/dataset_48.dat
+# per-dom hits tabular output:     /tmp/tmpp4O0Ju/files/000/dataset_49.dat
+# pfam-style tabular hit output:   /tmp/tmpp4O0Ju/files/000/dataset_50.dat
 # max ASCII text line length:      unlimited
 # Vit filter P threshold:       <= 0.001
 # Fwd filter P threshold:       <= 1e-05
 # random number seed set to:       4
-# number of worker threads:        2
+# number of worker threads:        1
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
 Query:       MYG_ESCGI  [L=153]
@@ -53,16 +53,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (153 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (153 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.54
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.67
 //
 Query:       MYG_HORSE  [L=153]
 Scores for complete sequences (score includes all domains):
@@ -102,16 +102,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (153 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (153 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.15
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.81
 //
 Query:       MYG_PROGU  [L=153]
 Scores for complete sequences (score includes all domains):
@@ -151,16 +151,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (153 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (153 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.54
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.81
 //
 Query:       MYG_SAISC  [L=153]
 Scores for complete sequences (score includes all domains):
@@ -200,16 +200,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (153 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (153 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.54
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.78
 //
 Query:       MYG_LYCPI  [L=153]
 Scores for complete sequences (score includes all domains):
@@ -249,16 +249,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (153 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (153 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.15
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.74
 //
 Query:       MYG_MOUSE  [L=153]
 Scores for complete sequences (score includes all domains):
@@ -298,16 +298,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (153 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (153 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.54
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.78
 //
 Query:       MYG_MUSAN  [L=148]
 Scores for complete sequences (score includes all domains):
@@ -347,16 +347,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (148 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (148 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.03
-# Mc/sec: 1.48
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.88
 //
 Query:       HBA_AILME  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -396,16 +396,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.80
 //
 Query:       HBA_PROLO  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -445,16 +445,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.06
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.73
 //
 Query:       HBA_PAGLA  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -494,16 +494,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.33
 //
 Query:       HBA_MACFA  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -543,16 +543,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.02u 0.01s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.65
 //
 Query:       HBA_MACSI  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -592,16 +592,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.73
 //
 Query:       HBA_PONPY  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -641,16 +641,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.67
 //
 Query:       HBA2_GALCR  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -690,16 +690,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.68
 //
 Query:       HBA_MESAU  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -739,16 +739,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04
-# Mc/sec: 1.06
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.41
 //
 Query:       HBA2_BOSMU  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -788,16 +788,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.02
-# Mc/sec: 2.12
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.64
 //
 Query:       HBA_ERIEU  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -837,16 +837,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.06
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.76
 //
 Query:       HBA_FRAPO  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -886,16 +886,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.70
 //
 Query:       HBA_PHACO  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -935,16 +935,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.56
 //
 Query:       HBA_TRIOC  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -984,16 +984,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.35
 //
 Query:       HBA_ANSSE  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -1033,16 +1033,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.52
 //
 Query:       HBA_COLLI  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -1082,16 +1082,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.41
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.79
 //
 Query:       HBAD_CHLME  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -1131,16 +1131,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.06
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.87
 //
 Query:       HBAD_PASMO  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -1180,16 +1180,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04
-# Mc/sec: 1.06
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 2.10
 //
 Query:       HBAZ_HORSE  [L=141]
 Scores for complete sequences (score includes all domains):
@@ -1229,16 +1229,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (141 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (141 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04
-# Mc/sec: 1.06
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.21
 //
 Query:       HBA4_SALIR  [L=142]
 Scores for complete sequences (score includes all domains):
@@ -1278,16 +1278,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (142 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (142 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04
-# Mc/sec: 1.07
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.72
 //
 Query:       HBB_ORNAN  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1327,16 +1327,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.01s 00:00:00.05 Elapsed: 00:00:00.05
-# Mc/sec: 0.88
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.63
 //
 Query:       HBB_TACAC  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1376,16 +1376,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.82
 //
 Query:       HBE_PONPY  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1425,16 +1425,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.02
+# Mc/sec: 1.68
 //
 Query:       HBB_SPECI  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1474,16 +1474,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04
-# Mc/sec: 1.10
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 2.16
 //
 Query:       HBB_SPETO  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1523,16 +1523,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.50
 //
 Query:       HBB_EQUHE  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1572,16 +1572,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 2.16
 //
 Query:       HBB_SUNMU  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1621,16 +1621,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 2.00
 //
 Query:       HBB_CALAR  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1670,16 +1670,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.01s 00:00:00.03 Elapsed: 00:00:00.02
+# Mc/sec: 1.87
 //
 Query:       HBB_MANSP  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1719,16 +1719,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.10
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.86
 //
 Query:       HBB_URSMA  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1768,16 +1768,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.65
 //
 Query:       HBB_RABIT  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1817,16 +1817,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.57
 //
 Query:       HBB_TUPGL  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1866,16 +1866,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.80
 //
 Query:       HBB_TRIIN  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1915,16 +1915,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
+# Mc/sec: 2.80
 //
 Query:       HBB_COLLI  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -1964,16 +1964,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.04u 0.00s 00:00:00.04 Elapsed: 00:00:00.04
-# Mc/sec: 1.10
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
+# Mc/sec: 2.22
 //
 Query:       HBB_LARRI  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -2013,16 +2013,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.82
 //
 Query:       HBB1_VAREX  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -2062,16 +2062,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.75
 //
 Query:       HBB2_XENTR  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -2111,16 +2111,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.02
+# Mc/sec: 1.82
 //
 Query:       HBBL_RANCA  [L=146]
 Scores for complete sequences (score includes all domains):
@@ -2160,16 +2160,16 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (146 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (146 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         2  (1); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.03
-# Mc/sec: 1.46
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.80
 //
 Query:       HBB2_TRICR  [L=145]
 Scores for complete sequences (score includes all domains):
@@ -2196,15 +2196,15 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (145 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (145 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
 Passed Fwd filter:                         1  (0.5); expected 0.0 (1e-05)
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               1  [number of targets reported over threshold]
-# CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.04
-# Mc/sec: 1.09
+# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02
+# Mc/sec: 1.87
 //
 [ok]
--- a/test-data/phmmer.pfamtblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/phmmer.pfamtblout	Mon Jun 11 15:52:05 2018 -0400
@@ -673,11 +673,11 @@
 sp|P02024|HBB_GORGO    144.1     3e-46     1   0.0      2    146      2    146      1    145     Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
 #
 # Program:         phmmer
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SEARCH
-# Query file:      /tmp/tmpqKBUss/files/000/dataset_1.dat
-# Target file:     /tmp/tmpqKBUss/files/000/dataset_2.dat
-# Option settings: phmmer --tblout /tmp/tmpqKBUss/files/000/dataset_4.dat --domtblout /tmp/tmpqKBUss/files/000/dataset_5.dat --pfamtblout /tmp/tmpqKBUss/files/000/dataset_6.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmpqKBUss/files/000/dataset_1.dat /tmp/tmpqKBUss/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmpqKBUss/job_working_directory/000/3
-# Date:            Sat Jun 25 19:48:26 2016
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_45.dat
+# Target file:     /tmp/tmpp4O0Ju/files/000/dataset_46.dat
+# Option settings: phmmer --tblout /tmp/tmpp4O0Ju/files/000/dataset_48.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_49.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_50.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_45.dat /tmp/tmpp4O0Ju/files/000/dataset_46.dat 
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/36/working
+# Date:            Fri Jun  8 12:19:38 2018
 # [ok]
--- a/test-data/phmmer.tblout	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/phmmer.tblout	Mon Jun 11 15:52:05 2018 -0400
@@ -92,11 +92,11 @@
 sp|P02024|HBB_GORGO  -          HBB2_TRICR           -            2.7e-46  144.3   0.0     3e-46  144.1   0.0   1.0   1   0   0   1   1   1   1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
 #
 # Program:         phmmer
-# Version:         3.1b2 (February 2015)
+# Version:         3.2 (June 2018)
 # Pipeline mode:   SEARCH
-# Query file:      /tmp/tmpqKBUss/files/000/dataset_1.dat
-# Target file:     /tmp/tmpqKBUss/files/000/dataset_2.dat
-# Option settings: phmmer --tblout /tmp/tmpqKBUss/files/000/dataset_4.dat --domtblout /tmp/tmpqKBUss/files/000/dataset_5.dat --pfamtblout /tmp/tmpqKBUss/files/000/dataset_6.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmpqKBUss/files/000/dataset_1.dat /tmp/tmpqKBUss/files/000/dataset_2.dat 
-# Current dir:     /tmp/tmpqKBUss/job_working_directory/000/3
-# Date:            Sat Jun 25 19:48:26 2016
+# Query file:      /tmp/tmpp4O0Ju/files/000/dataset_45.dat
+# Target file:     /tmp/tmpp4O0Ju/files/000/dataset_46.dat
+# Option settings: phmmer --tblout /tmp/tmpp4O0Ju/files/000/dataset_48.dat --domtblout /tmp/tmpp4O0Ju/files/000/dataset_49.dat --pfamtblout /tmp/tmpp4O0Ju/files/000/dataset_50.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --EmL 200 --EmN 200 --EvL 200 --EvN 200 --EfL 100 --EfN 200 --Eft 0.04 --seed 4 --cpu 1 /tmp/tmpp4O0Ju/files/000/dataset_45.dat /tmp/tmpp4O0Ju/files/000/dataset_46.dat 
+# Current dir:     /tmp/tmpp4O0Ju/job_working_directory/000/36/working
+# Date:            Fri Jun  8 12:19:38 2018
 # [ok]
--- a/test-data/uniprot_globins_match.out	Sat Apr 07 03:50:51 2018 -0400
+++ b/test-data/uniprot_globins_match.out	Mon Jun 11 15:52:05 2018 -0400
@@ -1,13 +1,13 @@
 # hmmsearch :: search profile(s) against a sequence database
-# HMMER 3.1b2 (February 2015); http://hmmer.org/
-# Copyright (C) 2015 Howard Hughes Medical Institute.
-# Freely distributed under the GNU General Public License (GPLv3).
+# HMMER 3.2 (June 2018); http://hmmer.org/
+# Copyright (C) 2018 Howard Hughes Medical Institute.
+# Freely distributed under the BSD open source license.
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-# query HMM file:                  /tmp/tmpJW6ntL/files/000/dataset_1.dat
-# target sequence database:        /tmp/tmpJW6ntL/files/000/dataset_2.dat
-# per-seq hits tabular output:     /tmp/tmpJW6ntL/files/000/dataset_4.dat
-# per-dom hits tabular output:     /tmp/tmpJW6ntL/files/000/dataset_5.dat
-# pfam-style tabular hit output:   /tmp/tmpJW6ntL/files/000/dataset_6.dat
+# query HMM file:                  /tmp/tmpp4O0Ju/files/000/dataset_25.dat
+# target sequence database:        /tmp/tmpp4O0Ju/files/000/dataset_26.dat
+# per-seq hits tabular output:     /tmp/tmpp4O0Ju/files/000/dataset_28.dat
+# per-dom hits tabular output:     /tmp/tmpp4O0Ju/files/000/dataset_29.dat
+# pfam-style tabular hit output:   /tmp/tmpp4O0Ju/files/000/dataset_30.dat
 # max ASCII text line length:      unlimited
 # Vit filter P threshold:       <= 0.001
 # Fwd filter P threshold:       <= 1e-05
@@ -15,7 +15,7 @@
 # number of worker threads:        1
 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
-Query:       globins4  [M=149]
+Query:       dataset_x  [M=149]
 Scores for complete sequences (score includes all domains):
    --- full sequence ---   --- best 1 domain ---    -#dom-
     E-value  score  bias    E-value  score  bias    exp  N  Sequence            Description
@@ -32,7 +32,7 @@
 
   Alignments for each domain:
   == domain 1  score: 222.6 bits;  conditional E-value: 2e-70
-             globins4   2 vLseaektkvkavWakveadveesGadiLvrlfkstPatqefFekFkdLstedelkksadvkkHgkkvldAlsdalakldekleaklkdLselHakklkvdpkyfkllsevlvdvlaarlpkeftadvqaaleKllalvakllaskYk 149
+            dataset_x   2 vLseaektkvkavWakveadveesGadiLvrlfkstPatqefFekFkdLstedelkksadvkkHgkkvldAlsdalakldekleaklkdLselHakklkvdpkyfkllsevlvdvlaarlpkeftadvqaaleKllalvakllaskYk 149
                           vLse+e++ v++vWakveadv+++G+diL+rlfks+P+t+e+F++Fk+L+te+e+k+s+d+kkHg++vl+Al+++l+k ++++ea+lk+L+++Ha+k+k+++ky++++se++++vl++r+p++f+ad+q+a++K+l+l++k++a+kYk
   sp|P02185|MYG_PHYCD   2 VLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTALGAILKK-KGHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGDFGADAQGAMNKALELFRKDIAAKYK 148
                           8*****************************************************************************.99******************************************************************7 PP
@@ -44,7 +44,7 @@
 
   Alignments for each domain:
   == domain 1  score: 217.0 bits;  conditional E-value: 1e-68
-             globins4   1 vvLseaektkvkavWakveadveesGadiLvrlfkstPatqefFekFkdLstedelkksadvkkHgkkvldAlsdalakldekleaklkdLselHakklkvdpkyfkllsevlvdvlaarlpkeftadvqaaleKllalvakllaskYk 149
+            dataset_x   1 vvLseaektkvkavWakveadveesGadiLvrlfkstPatqefFekFkdLstedelkksadvkkHgkkvldAlsdalakldekleaklkdLselHakklkvdpkyfkllsevlvdvlaarlpkeftadvqaaleKllalvakllaskYk 149
                           v+L+++ek++v+a+W+kv  +v+e+G+++L rl++++P+tq+fFe+F+dLst+d+++++++vk+Hgkkvl+A+sd+la+ld +l++++++LselH++kl+vdp++fkll++vlv+vla++++keft++vqaa++K++a va++la+kY+
   sp|P02024|HBB_GORGO   2 VHLTPEEKSAVTALWGKV--NVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLD-NLKGTFATLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH 147
                           69****************..*************************************************************.******************************************************************7 PP
@@ -53,8 +53,8 @@
 
 Internal pipeline statistics summary:
 -------------------------------------
-Query model(s):                              1  (149 nodes)
-Target sequences:                            2  (301 residues searched)
+Query model(s):                            1  (149 nodes)
+Target sequences:                          2  (301 residues searched)
 Passed MSV filter:                         2  (1); expected 0.0 (0.02)
 Passed bias filter:                        2  (1); expected 0.0 (0.02)
 Passed Vit filter:                         2  (1); expected 0.0 (0.001)
@@ -62,6 +62,6 @@
 Initial search space (Z):                  2  [actual number of targets]
 Domain search space  (domZ):               2  [number of targets reported over threshold]
 # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
-# Mc/sec: inf
+# Mc/sec: 20.02
 //
 [ok]