Mercurial > repos > iuc > homer_annotatepeaks
view test-data/motif_test1/homerResults/motif3.info.html @ 2:35dc2f57d755 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/homer commit 186b72f369eb2a11d92f4d63cac2e8ebe386b9bd"
| author | iuc |
|---|---|
| date | Mon, 13 Dec 2021 15:16:02 +0000 |
| parents | adab852c8216 |
| children |
line wrap: on
line source
<HTML><HEAD><TITLE>Motif 3</TITLE></HEAD> <H2>Information for 3-CGAGGCTAACCC (Motif 3)</H2> <svg width="305" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,0,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,0,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,25,34)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,50,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,50,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,51,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,52,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,75,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,76,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,75,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,100,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,101,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,100,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,125,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,126,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,125,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,150,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,150,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,151,34)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,175,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,176,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,177,34)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,200,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,201,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,202,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,225,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,226,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,225,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,250,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,251,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,250,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,275,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,276,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,275,34)">C</text> </g> </svg> <BR> Reverse Opposite:<BR/><svg width="305" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,0,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,0,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,25,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,52,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,50,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,51,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,50,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,75,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,75,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,76,34)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,100,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,100,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,101,34)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,125,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,125,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,126,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,127,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,150,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,151,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,150,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,177,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,175,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,176,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,175,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,202,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,200,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,201,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,200,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,227,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,225,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,225,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,226,34)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,250,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,251,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,250,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,277,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,275,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,276,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,275,34)">G</text> </g> </svg> <BR> <TABLE border="1" cellpading="0" cellspacing="0"> <TR><TD>p-value:</TD><TD>1e-1</TD></TR> <TR><TD>log p-value:</TD><TD>-2.916e+00</TD></TR> <TR><TD>Information Content per bp:</TD><TD>1.530</TD></TR> <TR><TD>Number of Target Sequences with motif</TD><TD>1.0</TD></TR> <TR><TD>Percentage of Target Sequences with motif</TD><TD>100.00%</TD></TR> <TR><TD>Number of Background Sequences with motif</TD><TD>217.8</TD></TR> <TR><TD>Percentage of Background Sequences with motif</TD><TD>5.43%</TD></TR> <TR><TD>Average Position of motif in Targets</TD><TD>91.0 +/- 0.0bp</TD></TR> <TR><TD>Average Position of motif in Background</TD><TD>101.8 +/- 65.4bp</TD></TR> <TR><TD>Strand Bias (log2 ratio + to - strand density)</TD><TD>10.0</TD></TR> <TR><TD>Multiplicity (# of sites on avg that occur together)</TD><TD>1.00</TD></TR> <TR><TD>Motif File:</TD><TD><A target="_blank" HREF="motif3.motif">file (matrix)</A><BR/><A target="_blank" HREF="motif3RV.motif">reverse opposite</A></TD></TR> <TR><TD>SVG Files for Logos:</TD><TD><A HREF="motif3.logo.svg">forward logo</A><BR/><A HREF="motif3RV.logo.svg">reverse opposite</A></TD></TR> </TABLE> <H3>Matches to Known Motifs</H3> <TABLE border="1" cellpading="0" cellspacing="0"> <TR><TD> <H4>PH0015.1_Crx/Jaspar</H4> <TABLE><TR><TD> <TABLE> <TR><TD>Match Rank:</TD><TD>1</TD></TR> <TR><TD>Score:</TD><TD>0.63</TD</TR> <TR><TD>Offset:</TD><TD>2</TD</TR> <TR><TD>Orientation:</TD><TD>reverse strand</TD></TR> <TR><TD>Alignment:</TD><TD><FONT face="courier">CGAGGCTAACCC------</FONT><BR><FONT face="courier">--AGGCTAATCCCCAANG</FONT></TD></TR></TABLE> </TD><TD> <svg width="455" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,0,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,0,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,25,34)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,50,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,50,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,51,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,52,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,75,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,76,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,75,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,100,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,101,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,100,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,125,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,126,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,125,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,150,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,150,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,151,34)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,175,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,176,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,177,34)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,200,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,201,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,202,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,225,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,226,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,225,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,250,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,251,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,250,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,275,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,276,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,275,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,302,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,300,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,300,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,301,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,327,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,325,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,325,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,326,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,352,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,350,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,350,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,351,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,377,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,375,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,375,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,376,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,402,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,400,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,400,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,401,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,427,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,425,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,425,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,426,11.5)">T</text> </g> </svg> <BR/> <svg width="455" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,2,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,0,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,0,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,1,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,25,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,25,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,26,11.5)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.16,50,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.19,51,41)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,50,31.5)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.4,52,19)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.101010101010101,76,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.141414141414141,77,43.9494949494949)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.232323232323232,75,36.8787878787879)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.525252525252525,75,25.2626262626263)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0909090909090909,101,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.101010101010101,100,44.4545454545455)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.121212121212121,102,39.4040404040404)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.686868686868687,100,33.3434343434343)">G</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.03,125,49)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.2,127,47.5)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.37,126,37.5)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.4,125,19)">C</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,150,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,150,49)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.02,152,49)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.98,151,48)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,175,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.02,176,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.98,177,48)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,200,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,201,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,1,202,49)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,227,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,225,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.04,225,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.96,226,47)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,250,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,251,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,1,250,49)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,275,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0404040404040404,276,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.95959595959596,275,46.979797979798)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.0495049504950495,302,49)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0891089108910891,301,46.5247524752475)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.267326732673267,300,42.0693069306931)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.594059405940594,300,28.7029702970297)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.07,327,49)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.09,326,45.5)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.11,325,41)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.73,325,35.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.12,350,49)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.17,350,43)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.26,351,34.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.45,352,21.5)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.099009900990099,375,49)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.138613861386139,375,44.049504950495)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.326732673267327,376,37.1188118811881)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.435643564356436,377,20.7821782178218)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.099009900990099,401,49)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.217821782178218,400,44.049504950495)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.306930693069307,402,33.1584158415842)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.376237623762376,400,17.8118811881188)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.09,426,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.13,425,44.5)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.31,427,38)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.47,425,22.5)">G</text> </g> </svg> </TD></TR></TABLE> </TD></TR> <TR><TD> <H4>CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer</H4> <TABLE><TR><TD> <TABLE> <TR><TD>Match Rank:</TD><TD>2</TD></TR> <TR><TD>Score:</TD><TD>0.62</TD</TR> <TR><TD>Offset:</TD><TD>4</TD</TR> <TR><TD>Orientation:</TD><TD>forward strand</TD></TR> <TR><TD>Alignment:</TD><TD><FONT face="courier">CGAGGCTAACCC</FONT><BR><FONT face="courier">----GCTAATCC</FONT></TD></TR></TABLE> </TD><TD> <svg width="305" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,0,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,0,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,25,34)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,50,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,50,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,51,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,52,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,75,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,76,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,75,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,100,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,101,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,100,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,125,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,126,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,125,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,150,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,150,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,151,34)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,175,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,176,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,177,34)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,200,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,201,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,202,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,225,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,226,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,225,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,250,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,251,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,250,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,275,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,276,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,275,34)">C</text> </g> </svg> <BR/> <svg width="305" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,2,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,0,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,0,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,1,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,25,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,25,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,26,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,52,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,50,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,50,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,51,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,75,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,75,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,76,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.148,102,49)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.162,101,41.6)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.245,100,33.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.445,100,21.25)">G</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.062,125,49)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.132,127,45.9)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.278,126,39.3)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.528,125,25.4)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.001,150,49)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.004,150,48.95)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.022,152,48.75)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.973,151,47.65)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.003,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.023,175,48.85)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.084,176,47.7)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.89,177,43.5)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.006,200,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.008,201,48.7)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.011,200,48.3)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.975,202,47.75)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.000999000999000999,227,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.00599400599400599,225,48.95004995005)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.182817182817183,225,48.6503496503497)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.81018981018981,226,39.5094905094905)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.001,252,49)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.005,251,48.95)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.016,250,48.7)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.978,250,47.9)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.011988011988012,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.012987012987013,275,48.4005994005994)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.221778221778222,276,47.7512487512488)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.753246753246753,275,36.6623376623377)">C</text> </g> </svg> </TD></TR></TABLE> </TD></TR> <TR><TD> <H4>ttk/dmmpmm(Noyes)/fly</H4> <TABLE><TR><TD> <TABLE> <TR><TD>Match Rank:</TD><TD>3</TD></TR> <TR><TD>Score:</TD><TD>0.61</TD</TR> <TR><TD>Offset:</TD><TD>0</TD</TR> <TR><TD>Orientation:</TD><TD>reverse strand</TD></TR> <TR><TD>Alignment:</TD><TD><FONT face="courier">CGAGGCTAACCC--</FONT><BR><FONT face="courier">CAAGGATAATCNAA</FONT></TD></TR></TABLE> </TD><TD> <svg width="355" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,0,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,0,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,25,34)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,50,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,50,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,51,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,52,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,75,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,76,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,75,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,100,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,101,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,100,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,125,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,126,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,125,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,150,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,150,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,151,34)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,175,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,176,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,177,34)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,200,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,201,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,202,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,225,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,226,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,225,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,250,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,251,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,250,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,275,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,276,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,275,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,302,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,300,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,300,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,301,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,327,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,325,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,325,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,326,11.5)">T</text> </g> </svg> <BR/> <svg width="355" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0227272727272727,1,49)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.113636363636364,0,47.8636363636364)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.386363636363636,2,42.1818181818182)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.477272727272727,0,22.8636363636364)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0454545454545455,26,49)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.136363636363636,25,46.7272727272727)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.363636363636364,25,39.9090909090909)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.454545454545455,27,21.7272727272727)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,50,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,50,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,51,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,1,52,49)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,75,49)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,76,49)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,1,75,49)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,100,49)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,101,49)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,1,100,49)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,125,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,125,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,126,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,1,127,49)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,152,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,150,49)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.227272727272727,150,49)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.772727272727273,151,37.6363636363637)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,175,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0454545454545455,176,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.954545454545455,177,46.7272727272727)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,200,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,201,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,1,202,49)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.0454545454545455,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.136363636363636,225,46.7272727272727)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.227272727272727,225,39.9090909090909)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.590909090909091,226,28.5454545454546)">T</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.136363636363636,251,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.181818181818182,252,42.1818181818182)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.181818181818182,250,33.0909090909091)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.5,250,24)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.181818181818182,276,49)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.227272727272727,275,39.9090909090909)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.272727272727273,275,28.5454545454546)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.318181818181818,277,14.9090909090909)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.0909090909090909,300,49)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.181818181818182,301,44.4545454545455)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.227272727272727,300,35.3636363636364)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.5,302,24)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.0454545454545455,325,49)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.181818181818182,325,46.7272727272727)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.227272727272727,326,37.6363636363636)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.545454545454545,327,26.2727272727273)">A</text> </g> </svg> </TD></TR></TABLE> </TD></TR> <TR><TD> <H4>bcd/dmmpmm(Bergman)/fly</H4> <TABLE><TR><TD> <TABLE> <TR><TD>Match Rank:</TD><TD>4</TD></TR> <TR><TD>Score:</TD><TD>0.59</TD</TR> <TR><TD>Offset:</TD><TD>2</TD</TR> <TR><TD>Orientation:</TD><TD>forward strand</TD></TR> <TR><TD>Alignment:</TD><TD><FONT face="courier">CGAGGCTAACCC-</FONT><BR><FONT face="courier">--CCNCTAATCCN</FONT></TD></TR></TABLE> </TD><TD> <svg width="330" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,0,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,0,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,25,34)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,50,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,50,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,51,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,52,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,75,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,76,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,75,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,100,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,101,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,100,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,125,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,126,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,125,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,150,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,150,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,151,34)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,175,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,176,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,177,34)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,200,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,201,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,202,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,225,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,226,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,225,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,250,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,251,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,250,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,275,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,276,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,275,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,302,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,300,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,300,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,301,11.5)">T</text> </g> </svg> <BR/> <svg width="330" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,2,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,0,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,0,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,1,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,25,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,25,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,26,11.5)">T</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0416666666666667,51,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.208333333333333,52,46.9166666666667)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.291666666666667,50,36.5)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.458333333333333,50,21.9166666666667)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0833333333333333,76,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.208333333333333,77,44.8333333333333)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.291666666666667,75,34.4166666666667)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.416666666666667,75,19.8333333333333)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.125,101,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,102,42.75)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.291666666666667,100,30.25)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.333333333333333,100,15.6666666666666)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.0833333333333333,127,49)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.166666666666667,126,44.8333333333333)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.208333333333333,125,36.5)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.541666666666667,125,26.0833333333333)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,150,49)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.0416666666666667,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.0833333333333333,150,46.9166666666667)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.875,151,42.75)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,175,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,176,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,1,177,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,200,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,201,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,1,202,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,225,49)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.0833333333333333,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.125,225,44.8333333333333)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.791666666666667,226,38.5833333333333)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.0416666666666667,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.0416666666666667,250,46.9166666666667)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0833333333333333,251,44.8333333333333)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.833333333333333,250,40.6666666666667)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.0416666666666667,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.0416666666666667,275,46.9166666666667)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0833333333333333,276,44.8333333333333)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.833333333333333,275,40.6666666666667)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.208333333333333,302,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,300,38.5833333333333)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,301,26.0833333333333)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.291666666666667,300,13.5833333333333)">C</text> </g> </svg> </TD></TR></TABLE> </TD></TR> <TR><TD> <H4>bcd/dmmpmm(Noyes_hd)/fly</H4> <TABLE><TR><TD> <TABLE> <TR><TD>Match Rank:</TD><TD>5</TD></TR> <TR><TD>Score:</TD><TD>0.59</TD</TR> <TR><TD>Offset:</TD><TD>3</TD</TR> <TR><TD>Orientation:</TD><TD>forward strand</TD></TR> <TR><TD>Alignment:</TD><TD><FONT face="courier">CGAGGCTAACCC-</FONT><BR><FONT face="courier">---GGTTAATCCN</FONT></TD></TR></TABLE> </TD><TD> <svg width="330" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,0,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,0,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,25,34)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,50,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,50,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,51,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,52,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,75,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,76,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,75,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,100,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,101,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,100,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,125,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,126,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,125,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,150,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,150,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,151,34)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,175,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,176,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,177,34)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,200,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,201,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,202,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,225,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,226,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,225,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,250,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,251,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,250,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,275,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,276,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,275,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,302,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,300,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,300,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,301,11.5)">T</text> </g> </svg> <BR/> <svg width="330" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,2,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,0,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,0,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,1,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,25,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,25,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,26,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,52,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,50,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,50,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,51,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.136363636363636,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.136363636363636,75,42.1818181818182)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.318181818181818,76,35.3636363636364)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.409090909090909,75,19.4545454545455)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.0454545454545455,102,49)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.227272727272727,101,46.7272727272727)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.272727272727273,100,35.3636363636364)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.454545454545455,100,21.7272727272727)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.136363636363636,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.136363636363636,125,42.1818181818182)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.227272727272727,125,35.3636363636364)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.500000000000001,126,24)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,150,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,150,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,1,151,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,175,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0909090909090909,176,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.909090909090909,177,44.4545454545455)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,200,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,201,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,1,202,49)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,227,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,225,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.0454545454545455,225,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.954545454545455,226,46.7272727272727)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,250,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,251,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,1,250,49)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,275,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0454545454545455,276,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.954545454545455,275,46.7272727272727)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.125,301,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.261363636363636,302,42.75)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.306818181818182,300,29.6818181818182)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.306818181818182,300,14.3409090909091)">G</text> </g> </svg> </TD></TR></TABLE> </TD></TR> <TR><TD> <H4>HOW(KH)/Drosophila_melanogaster-RNCMPT00118-PBM/HughesRNA</H4> <TABLE><TR><TD> <TABLE> <TR><TD>Match Rank:</TD><TD>6</TD></TR> <TR><TD>Score:</TD><TD>0.59</TD</TR> <TR><TD>Offset:</TD><TD>4</TD</TR> <TR><TD>Orientation:</TD><TD>forward strand</TD></TR> <TR><TD>Alignment:</TD><TD><FONT face="courier">CGAGGCTAACCC</FONT><BR><FONT face="courier">----ACTAACA-</FONT></TD></TR></TABLE> </TD><TD> <svg width="305" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,0,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,0,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,25,34)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,50,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,50,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,51,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,52,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,75,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,76,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,75,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,100,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,101,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,100,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,125,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,126,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,125,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,150,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,150,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,151,34)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,175,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,176,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,177,34)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,200,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,201,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,202,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,225,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,226,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,225,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,250,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,251,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,250,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,275,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,276,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,275,34)">C</text> </g> </svg> <BR/> <svg width="305" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,2,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,0,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,0,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,1,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,25,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,25,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,26,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,52,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,50,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,50,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,51,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,75,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,75,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,76,11.5)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.0699300699300699,100,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.0699300699300699,100,45.5034965034965)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0699300699300699,101,42.006993006993)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.79020979020979,102,38.5104895104895)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.004,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.004,125,48.8)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.004,126,48.6)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.988,125,48.4)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.004,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.004,150,48.8)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.004,150,48.6)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.988,151,48.4)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.004,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.004,175,48.8)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.004,176,48.6)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.988,177,48.4)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.004,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.004,200,48.8)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.004,201,48.6)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.988,202,48.4)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.004,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.004,225,48.8)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.004,226,48.6)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.988,225,48.4)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.103,251,49)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.17,250,43.85)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.295,250,35.35)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.432,252,20.6)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,277,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,275,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,275,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,276,11.5)">T</text> </g> </svg> </TD></TR></TABLE> </TD></TR> <TR><TD> <H4>GT-1/MA1020.1/Jaspar</H4> <TABLE><TR><TD> <TABLE> <TR><TD>Match Rank:</TD><TD>7</TD></TR> <TR><TD>Score:</TD><TD>0.59</TD</TR> <TR><TD>Offset:</TD><TD>4</TD</TR> <TR><TD>Orientation:</TD><TD>forward strand</TD></TR> <TR><TD>Alignment:</TD><TD><FONT face="courier">CGAGGCTAACCC</FONT><BR><FONT face="courier">----GTTAACCA</FONT></TD></TR></TABLE> </TD><TD> <svg width="305" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,0,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,0,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,25,34)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,50,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,50,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,51,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,52,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,75,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,76,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,75,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,100,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,101,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,100,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,125,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,126,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,125,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,150,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,150,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,151,34)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,175,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,176,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,177,34)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,200,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,201,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,202,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,225,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,226,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,225,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,250,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,251,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,250,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,275,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,276,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,275,34)">C</text> </g> </svg> <BR/> <svg width="305" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,2,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,0,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,0,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,1,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,25,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,25,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,26,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,52,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,50,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,50,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,51,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,75,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,75,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,76,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.15015015015015,100,49)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.2002002002002,101,41.4924924924925)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.64964964964965,100,31.4824824824825)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,125,49)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.0670670670670671,125,49)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.932932932932933,126,45.6466466466466)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,150,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,150,49)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.03,152,49)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.97,151,47.5)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,175,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,176,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,1,177,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,200,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,201,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.029,200,49)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.971,202,47.55)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,225,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,226,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.03,227,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.97,225,47.5)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,250,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.061,251,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.939,250,45.95)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.084,276,49)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.125,275,44.8)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.167,275,38.55)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.624,277,30.2)">A</text> </g> </svg> </TD></TR></TABLE> </TD></TR> <TR><TD> <H4>Kr/dmmpmm(Papatsenko)/fly</H4> <TABLE><TR><TD> <TABLE> <TR><TD>Match Rank:</TD><TD>8</TD></TR> <TR><TD>Score:</TD><TD>0.58</TD</TR> <TR><TD>Offset:</TD><TD>6</TD</TR> <TR><TD>Orientation:</TD><TD>forward strand</TD></TR> <TR><TD>Alignment:</TD><TD><FONT face="courier">CGAGGCTAACCC---</FONT><BR><FONT face="courier">------TAACCCTTT</FONT></TD></TR></TABLE> </TD><TD> <svg width="380" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,0,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,0,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,25,34)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,50,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,50,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,51,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,52,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,75,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,76,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,75,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,100,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,101,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,100,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,125,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,126,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,125,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,150,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,150,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,151,34)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,175,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,176,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,177,34)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,200,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,201,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,202,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,225,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,226,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,225,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,250,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,251,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,250,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,275,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,276,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,275,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,302,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,300,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,300,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,301,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,327,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,325,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,325,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,326,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,352,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,350,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,350,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,351,11.5)">T</text> </g> </svg> <BR/> <svg width="380" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,2,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,0,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,0,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,1,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,25,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,25,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,26,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,52,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,50,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,50,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,51,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,75,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,75,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,76,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,100,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,100,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,101,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,127,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,125,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,125,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,126,11.5)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.0476190476190476,150,49)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.19047619047619,152,46.6190476190476)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.238095238095238,150,37.0952380952381)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.523809523809524,151,25.1904761904762)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,175,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0476190476190476,176,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.142857142857143,175,46.6190476190476)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.80952380952381,177,39.4761904761905)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,200,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0476190476190476,201,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.0952380952380952,200,46.6190476190476)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.857142857142857,202,41.8571428571429)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,225,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.380952380952381,226,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.619047619047619,225,29.952380952381)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,250,49)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.0476190476190476,252,49)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0476190476190476,251,46.6190476190476)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.904761904761905,250,44.2380952380952)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.0476190476190476,275,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0476190476190476,276,46.6190476190476)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.904761904761905,275,44.2380952380952)">C</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.0952380952380952,300,49)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.142857142857143,302,44.2380952380952)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.19047619047619,300,37.0952380952381)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.571428571428571,301,27.5714285714286)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,325,49)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.142857142857143,327,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.142857142857143,325,41.8571428571429)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.714285714285714,326,34.7142857142857)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.0476190476190476,352,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.0476190476190476,350,46.6190476190476)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.238095238095238,350,44.2380952380952)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.666666666666667,351,32.3333333333333)">T</text> </g> </svg> </TD></TR></TABLE> </TD></TR> <TR><TD> <H4>HNRNPK(KH)/Homo_sapiens-RNCMPT00026-PBM/HughesRNA</H4> <TABLE><TR><TD> <TABLE> <TR><TD>Match Rank:</TD><TD>9</TD></TR> <TR><TD>Score:</TD><TD>0.58</TD</TR> <TR><TD>Offset:</TD><TD>5</TD</TR> <TR><TD>Orientation:</TD><TD>forward strand</TD></TR> <TR><TD>Alignment:</TD><TD><FONT face="courier">CGAGGCTAACCC</FONT><BR><FONT face="courier">-----CCAACCC</FONT></TD></TR></TABLE> </TD><TD> <svg width="305" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,0,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,0,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,25,34)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,50,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,50,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,51,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,52,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,75,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,76,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,75,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,100,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,101,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,100,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,125,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,126,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,125,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,150,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,150,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,151,34)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,175,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,176,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,177,34)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,200,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,201,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,202,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,225,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,226,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,225,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,250,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,251,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,250,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,275,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,276,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,275,34)">C</text> </g> </svg> <BR/> <svg width="305" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,2,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,0,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,0,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,1,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,25,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,25,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,26,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,52,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,50,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,50,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,51,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,75,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,75,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,76,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,100,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,100,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,101,11.5)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.017,125,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.017,126,48.15)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.11,127,47.3)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.856,125,41.8)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.017,150,49)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.108,152,48.15)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.11,151,42.75)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.765,150,37.25)">C</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.017,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.017,175,48.15)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.11,176,47.3)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.856,177,41.8)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.017017017017017,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.103103103103103,200,48.1491491491491)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.286286286286286,201,42.993993993994)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.593593593593594,202,28.6796796796797)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.041,225,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.144,226,46.95)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.313,227,39.75)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.502,225,24.1)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.0640640640640641,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.0640640640640641,250,45.7967967967968)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.0640640640640641,251,42.5935935935936)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.807807807807808,250,39.3903903903904)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.088,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.088,275,44.6)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.088,276,40.2)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.736,275,35.8)">C</text> </g> </svg> </TD></TR></TABLE> </TD></TR> <TR><TD> <H4>bcd/dmmpmm(Papatsenko)/fly</H4> <TABLE><TR><TD> <TABLE> <TR><TD>Match Rank:</TD><TD>10</TD></TR> <TR><TD>Score:</TD><TD>0.58</TD</TR> <TR><TD>Offset:</TD><TD>4</TD</TR> <TR><TD>Orientation:</TD><TD>forward strand</TD></TR> <TR><TD>Alignment:</TD><TD><FONT face="courier">CGAGGCTAACCC-</FONT><BR><FONT face="courier">----CCTAATCCC</FONT></TD></TR></TABLE> </TD><TD> <svg width="330" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,2,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,0,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,1,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,0,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,25,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,26,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,25,34)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,50,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,50,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,51,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,52,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,75,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,76,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,75,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,102,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,100,44)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,101,39)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.700,100,34)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,127,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,125,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,126,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,125,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,152,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,150,44)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,150,39)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.700,151,34)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,175,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,175,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,176,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,177,34)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.100,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,200,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,201,39)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.700,202,34)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,227,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,225,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,226,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,225,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,250,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,251,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,250,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.100,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.100,275,44)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.100,276,39)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.700,275,34)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,302,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,300,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,300,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,301,11.5)">T</text> </g> </svg> <BR/> <svg width="330" height="50"> <g font-family="Arial" font-weight="bold" font-size="66.5"> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,2,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,0,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,0,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,1,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,27,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,25,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,25,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,26,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,52,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,50,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,50,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,51,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.25,77,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.25,75,36.5)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.25,75,24)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.25,76,11.5)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.147058823529412,102,49)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.176470588235294,101,41.6470588235294)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.323529411764706,100,32.8235294117647)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.352941176470588,100,16.6470588235294)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.147058823529412,125,49)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.176470588235294,127,41.6470588235294)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.323529411764706,126,32.8235294117647)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.352941176470588,125,16.6470588235294)">C</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,150,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,150,49)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.176470588235294,152,49)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.823529411764706,151,40.1764705882353)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,175,49)">C</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,176,49)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.0294117647058824,175,49)">G</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.970588235294118,177,47.5294117647059)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0,200,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,200,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,201,49)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,1,202,49)">A</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,227,49)">A</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.0588235294117647,225,49)">C</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.0882352941176471,225,46.0588235294118)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.852941176470588,226,41.6470588235294)">T</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0,252,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0,250,49)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0,251,49)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,1,250,49)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.0294117647058824,277,49)">A</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.0588235294117647,275,47.5294117647059)">G</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.117647058823529,276,44.5882352941177)">T</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.794117647058823,275,38.7058823529412)">C</text> <text fill="#00BB00" x="0" y="0" transform="matrix(0.53,0,0,0.117647058823529,302,49)">A</text> <text fill="#DD0000" x="0" y="0" transform="matrix(0.65,0,0,0.205882352941176,301,43.1176470588235)">T</text> <text fill="#F9A500" x="0" y="0" transform="matrix(0.55,0,0,0.323529411764706,300,32.8235294117647)">G</text> <text fill="#0000EE" x="0" y="0" transform="matrix(0.59,0,0,0.352941176470588,300,16.6470588235294)">C</text> </g> </svg> </TD></TR></TABLE> </TD></TR> </TABLE> <P></P> </BODY></HTML>