Mercurial > repos > iuc > humann2

diff humann2.xml @ 4:019864881779 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann2 commit 52d835f027b052a0a887be14a55faf9fa9e456ae"
author iuc
date Mon, 01 Feb 2021 18:17:35 +0000
parents b168c0ef3c14
children bb13650e8115
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--- a/humann2.xml	Sat Jan 25 18:25:32 2020 -0500
+++ b/humann2.xml	Mon Feb 01 18:17:35 2021 +0000
@@ -1,8 +1,11 @@
-<tool id="humann2" name="HUMAnN2" version="@WRAPPER_VERSION@.0">
+<tool id="humann2" name="HUMAnN2" version="@WRAPPER_VERSION@.1">
     <description>to profile presence/absence and abundance of microbial pathways and gene families</description>
     <macros>
         <import>humann2_macros.xml</import>
     </macros>
+    <stdio>
+        <regex match="Failed to allocate sufficient memory." source="stderr" level="fatal_oom" description="Out of memory error occurred" />
+    </stdio>
     <expand macro="requirements">        
         <requirement type="package" version="2.3.0">bowtie2</requirement>
         <requirement type="package" version="2.6.0">metaphlan2</requirement>