Mercurial > repos > iuc > hyphy_busted
diff hyphy_busted.xml @ 35:e908c4003bd8 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit e7a89841d59689e87db592e112f9c8fb5331d954
author | iuc |
---|---|
date | Thu, 02 Mar 2023 15:18:01 +0000 |
parents | e931e69b5a80 |
children |
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--- a/hyphy_busted.xml Thu Aug 18 13:52:20 2022 +0000 +++ b/hyphy_busted.xml Thu Mar 02 15:18:01 2023 +0000 @@ -1,5 +1,4 @@ -<?xml version="1.0"?> -<tool id="hyphy_busted" name="HyPhy-BUSTED" version="@TOOL_VERSION@+galaxy2" profile="19.09"> +<tool id="hyphy_busted" name="HyPhy-BUSTED" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> <description>Branch-site Unrestricted Statistical Test for Episodic Diversification</description> <macros> <import>macros.xml</import> @@ -31,7 +30,13 @@ <test> <param name="input_file" ftype="fasta" value="absrel-in1.fa"/> <param name="input_nhx" ftype="nhx" value="absrel-in1.nhx"/> - <output name="busted_output" file="busted-out1.json" compare="sim_size"/> + <output name="busted_output"> + <assert_contents> + <has_size value="113683" delta="2000"/> + <has_text text="substitutions"/> + <has_text text="test results"/> + </assert_contents> + </output> </test> <test> <param name="input_file" ftype="nex" value="busted-in2.nex"/> @@ -41,8 +46,19 @@ </conditional> <param name="srv_options" value="specify" /> <param name="save_alternative_model" value="true" /> - <output name="busted_output" file="busted-out2-1.json" compare="sim_size"/> - <output name="alternative_model" file="busted-out2-2.json" compare="sim_size"/> + <output name="busted_output"> + <assert_contents> + <has_size value="112119" delta="2000"/> + <has_text text="substitutions"/> + <has_text text="test results"/> + </assert_contents> + </output> + <output name="alternative_model"> + <assert_contents> + <has_size value="333928" delta="2000"/> + <has_text text="END;"/> + </assert_contents> + </output> </test> </tests> <help><![CDATA[