Mercurial > repos > iuc > idba_hybrid

comparison test-data/out/log @ 0:a81c5169e9fc draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/idba_ud commit 61e1699e65d6fd9f4f73650ed8463b37cd701344
author iuc
date Mon, 05 Aug 2019 15:59:15 -0400
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-1:000000000000 0:a81c5169e9fc
1 number of threads 4
2 reads 302
3 long reads 0
4 extra reads 0
5 read_length 76
6 kmer 20
7 kmers 728 727
8 merge bubble 0
9 contigs: 1 n50: 747 max: 747 mean: 747 total length: 747 n80: 747
10 aligned 300 reads
11 confirmed bases: 690 correct reads: 230 bases: 0
12 distance mean 214 sd 49.643
13 seed contigs 1 local contigs 2
14 kmer 40
15 kmers 710 709
16 merge bubble 0
17 contigs: 1 n50: 749 max: 749 mean: 749 total length: 749 n80: 749
18 aligned 302 reads
19 confirmed bases: 692 correct reads: 231 bases: 0
20 distance mean 213.649 sd 49.4062
21 seed contigs 1 local contigs 2
22 kmer 60
23 kmers 690 689
24 merge bubble 0
25 contigs: 1 n50: 749 max: 749 mean: 749 total length: 749 n80: 749
26 aligned 302 reads
27 confirmed bases: 692 correct reads: 231 bases: 0
28 distance mean 213.649 sd 49.4062
29 seed contigs 1 local contigs 2
30 kmer 80
31 kmers 670 669
32 merge bubble 0
33 contigs: 1 n50: 749 max: 749 mean: 749 total length: 749 n80: 749
34 aligned 302 reads
35 confirmed bases: 692 correct reads: 231 bases: 0
36 distance mean 213.649 sd 49.4062
37 seed contigs 1 local contigs 2
38 kmer 100
39 kmers 650 649
40 merge bubble 0
41 contigs: 1 n50: 749 max: 749 mean: 749 total length: 749 n80: 749
42 reads 302
43 aligned 302 reads
44 distance mean 213.649 sd 49.4062
45 expected coverage 0.448071
46 edgs 0
47 contigs: 1 n50: 749 max: 749 mean: 749 total length: 749 n80: 749