Mercurial > repos > iuc > idr
view test-data/idr_input4.1.gff @ 0:d3ebbf39b1c5 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/idr/ commit 65024f2c106a2a7af0e2b656123058393941c41b
author | iuc |
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date | Tue, 22 Aug 2017 05:20:25 -0400 |
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##gff-version 2 ##bed_to_gff_converter.py chr19 bed2gff . 50083710 50084074 0 . . .; chr1 bed2gff . 44678951 44679261 0 . . .; chr6 bed2gff . 28048576 28048870 0 . . .; chr22 bed2gff . 22337038 22337397 0 . . .; chr11 bed2gff . 59578147 59578443 0 . . .; chr15 bed2gff . 35261840 35262132 0 . . .; chr12 bed2gff . 109490191 109490472 0 . . .; chr5 bed2gff . 148724797 148725118 0 . . .; chr8 bed2gff . 56987001 56987305 0 . . .; chr6 bed2gff . 31515127 31515462 0 . . .; chr12 bed2gff . 69080591 69080876 0 . . .; chr16 bed2gff . 740288 740602 0 . . .; chr19 bed2gff . 11039250 11039594 0 . . .; chr17 bed2gff . 30771317 30771592 0 . . .; chr1 bed2gff . 10003302 10003624 0 . . .; chr13 bed2gff . 41345218 41345502 0 . . .; chr16 bed2gff . 31085463 31085852 0 . . .; chr9 bed2gff . 131084619 131084946 0 . . .; chr1 bed2gff . 28655398 28655693 0 . . .; chr21 bed2gff . 30365080 30365419 0 . . .; chr2 bed2gff . 55496260 55496554 0 . . .; chr5 bed2gff . 102455722 102456060 0 . . .; chr7 bed2gff . 127983843 127984113 0 . . .; chr1 bed2gff . 155112892 155113167 0 . . .; chr19 bed2gff . 50879460 50879818 0 . . .; chr16 bed2gff . 2653190 2653529 0 . . .; chr16 bed2gff . 84220528 84220849 0 . . .; chr1 bed2gff . 173683884 173684188 0 . . .; chr11 bed2gff . 47600410 47600710 0 . . .; chr15 bed2gff . 49447769 49448060 0 . . .; chr22 bed2gff . 20861684 20862012 0 . . .; chr6 bed2gff . 131949256 131949559 0 . . .; chr8 bed2gff . 37707279 37707606 0 . . .; chr15 bed2gff . 23810631 23810906 0 . . .; chr7 bed2gff . 141437944 141438285 0 . . .; chr21 bed2gff . 46359726 46360023 0 . . .; chr6 bed2gff . 28219918 28220206 0 . . .; chr7 bed2gff . 102987942 102988206 0 . . .; chr7 bed2gff . 96746760 96747035 0 . . .; chr6 bed2gff . 159420748 159421012 0 . . .; chr17 bed2gff . 40925310 40925566 0 . . .; chr1 bed2gff . 38455582 38455905 0 . . .; chr20 bed2gff . 57226117 57226411 0 . . .; chrX bed2gff . 64754698 64754986 0 . . .; chr17 bed2gff . 49230696 49231019 0 . . .; chr20 bed2gff . 31989221 31989517 0 . . .; chr22 bed2gff . 31555974 31556248 0 . . .; chr11 bed2gff . 68671189 68671471 0 . . .; chr1 bed2gff . 145096233 145096542 0 . . .; chr6 bed2gff . 17707127 17707437 0 . . .; chr19 bed2gff . 13885106 13885378 0 . . .; chr16 bed2gff . 67260861 67261153 0 . . .; chr8 bed2gff . 143751279 143751554 0 . . .; chr6 bed2gff . 28104505 28104786 0 . . .; chr16 bed2gff . 29801823 29802106 0 . . .; chr6 bed2gff . 36842447 36842765 0 . . .; chr3 bed2gff . 127842654 127842984 0 . . .; chr16 bed2gff . 67906807 67907079 0 . . .; chr2 bed2gff . 233415231 233415501 0 . . .; chr7 bed2gff . 75677177 75677464 0 . . .; chr7 bed2gff . 44240379 44240704 0 . . .; chr1 bed2gff . 224301663 224301925 0 . . .; chr3 bed2gff . 52029807 52030102 0 . . .; chr20 bed2gff . 34824215 34824488 0 . . .; chr22 bed2gff . 19419872 19420176 0 . . .; chr2 bed2gff . 74681965 74682322 0 . . .; chr5 bed2gff . 43515151 43515431 0 . . .; chr9 bed2gff . 37800622 37800902 0 . . .; chr7 bed2gff . 129691099 129691376 0 . . .; chr12 bed2gff . 123459110 123459398 0 . . .; chr19 bed2gff . 56146184 56146483 0 . . .; chr1 bed2gff . 38478186 38478507 0 . . .; chr16 bed2gff . 1823030 1823306 0 . . .; chr7 bed2gff . 5553329 5553581 0 . . .; chr8 bed2gff . 145133270 145133670 0 . . .; chr12 bed2gff . 124086465 124086754 0 . . .; chr11 bed2gff . 31391240 31391510 0 . . .; chr1 bed2gff . 218458480 218458748 0 . . .; chr19 bed2gff . 59031045 59031449 0 . . .; chr2 bed2gff . 70120939 70121198 0 . . .; chr12 bed2gff . 124118112 124118446 0 . . .; chr12 bed2gff . 50794457 50794722 0 . . .; chr20 bed2gff . 62612264 62612568 0 . . .; chr2 bed2gff . 242041624 242041899 0 . . .; chr20 bed2gff . 34638795 34639068 0 . . .; chr7 bed2gff . 44530151 44530427 0 . . .; chr10 bed2gff . 1102536 1102869 0 . . .; chr13 bed2gff . 52768476 52768744 0 . . .; chr16 bed2gff . 2732287 2732616 0 . . .; chr16 bed2gff . 1470652 1471004 0 . . .; chr19 bed2gff . 59010761 59011062 0 . . .; chr5 bed2gff . 167913289 167913559 0 . . .; chr16 bed2gff . 28857523 28857833 0 . . .; chr20 bed2gff . 44485922 44486239 0 . . .; chr18 bed2gff . 33552457 33552728 0 . . .; chr1 bed2gff . 46153686 46153989 0 . . .; chr1 bed2gff . 20834539 20834840 0 . . .; chr15 bed2gff . 34517028 34517331 0 . . .; chr5 bed2gff . 93954202 93954466 0 . . .; chr8 bed2gff . 11141764 11142084 0 . . .; chr6 bed2gff . 170893599 170893890 0 . . .; chr1 bed2gff . 163291428 163291749 0 . . .; chr19 bed2gff . 9938401 9938695 0 . . .; chr7 bed2gff . 73668667 73668954 0 . . .; chr19 bed2gff . 4182458 4182705 0 . . .; chr16 bed2gff . 89787228 89787505 0 . . .; chr11 bed2gff . 8710370 8710722 0 . . .; chr3 bed2gff . 149470175 149470450 0 . . .; chr9 bed2gff . 127177598 127177871 0 . . .; chr12 bed2gff . 54582617 54582998 0 . . .; chr14 bed2gff . 24657997 24658289 0 . . .; chr7 bed2gff . 139024854 139025179 0 . . .; chr2 bed2gff . 3622619 3622940 0 . . .; chr5 bed2gff . 133702770 133703057 0 . . .; chr7 bed2gff . 99097811 99098072 0 . . .; chr2 bed2gff . 74699681 74699975 0 . . .; chr9 bed2gff . 137029867 137030208 0 . . .; chr9 bed2gff . 139294531 139294815 0 . . .; chr11 bed2gff . 62358925 62359223 0 . . .; 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chr3 bed2gff . 15468897 15469195 0 . . .; chr8 bed2gff . 23351716 23351994 0 . . .; chr7 bed2gff . 2281728 2281978 0 . . .; chr2 bed2gff . 45838296 45838560 0 . . .; chr6 bed2gff . 28367415 28367688 0 . . .; chr17 bed2gff . 42092241 42092535 0 . . .; chr20 bed2gff . 35917909 35918177 0 . . .; chr19 bed2gff . 19302859 19303130 0 . . .; chr9 bed2gff . 35103030 35103302 0 . . .; chr3 bed2gff . 139062706 139062962 0 . . .; chr1 bed2gff . 155990642 155990891 0 . . .; chr15 bed2gff . 40674995 40675277 0 . . .; chr9 bed2gff . 98638135 98638441 0 . . .; chr11 bed2gff . 47429850 47430141 0 . . .; chr1 bed2gff . 149982575 149982829 0 . . .; chr9 bed2gff . 133454818 133455093 0 . . .; chr1 bed2gff . 179851718 179851996 0 . . .; chr3 bed2gff . 155572158 155572487 0 . . .; chr9 bed2gff . 140473232 140473536 0 . . .; chr12 bed2gff . 53574326 53574567 0 . . .; chr5 bed2gff . 74062846 74063148 0 . . .; chr17 bed2gff . 61678076 61678361 0 . . .; chr5 bed2gff . 154033485 154033803 0 . . .; chr6 bed2gff . 7389868 7390154 0 . . .; chr20 bed2gff . 44992935 44993209 0 . . .; chr9 bed2gff . 123555554 123555870 0 . . .; chr7 bed2gff . 134855228 134855753 0 . . .; chr15 bed2gff . 90437138 90437401 0 . . .; chr11 bed2gff . 43902161 43902435 0 . . .; chr7 bed2gff . 44084080 44084355 0 . . .; chr1 bed2gff . 85725249 85725499 0 . . .; chr17 bed2gff . 57287227 57287480 0 . . .; chr15 bed2gff . 64679824 64680146 0 . . .; chr19 bed2gff . 4246829 4247170 0 . . .; chr1 bed2gff . 227922908 227923177 0 . . .; chr7 bed2gff . 1609578 1609872 0 . . .; chr3 bed2gff . 53381513 53381800 0 . . .; chr22 bed2gff . 19419157 19419437 0 . . .; chr9 bed2gff . 130700024 130700283 0 . . .; chr4 bed2gff . 84377027 84377316 0 . . .; chr9 bed2gff . 35812179 35812422 0 . . .; chr7 bed2gff . 6616904 6617170 0 . . .; chr12 bed2gff . 56223272 56223554 0 . . .; chr19 bed2gff . 16770836 16771104 0 . . .; chr5 bed2gff . 443139 443420 0 . . .; chr16 bed2gff . 31044610 31044900 0 . . .; chr17 bed2gff . 79633577 79633869 0 . . .; chr11 bed2gff . 47270293 47270542 0 . . .; 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chr12 bed2gff . 117348630 117348860 0 . . .; chr12 bed2gff . 105629904 105630185 0 . . .; chr20 bed2gff . 2644751 2645000 0 . . .; chr12 bed2gff . 75905284 75905547 0 . . .; chr21 bed2gff . 46221615 46221878 0 . . .; chr5 bed2gff . 153418354 153418649 0 . . .; chr1 bed2gff . 3541251 3541500 0 . . .; chr14 bed2gff . 75179681 75179940 0 . . .; chr1 bed2gff . 44435385 44435719 0 . . .; chr2 bed2gff . 71357596 71357848 0 . . .; chr19 bed2gff . 17530521 17530795 0 . . .; chr12 bed2gff . 7079748 7080121 0 . . .; chr2 bed2gff . 96971152 96971429 0 . . .; chr6 bed2gff . 17600382 17600633 0 . . .; chr11 bed2gff . 10772608 10772880 0 . . .; chr1 bed2gff . 36554313 36554613 0 . . .; chr11 bed2gff . 65479568 65479834 0 . . .; chr6 bed2gff . 42185492 42185753 0 . . .; chr19 bed2gff . 10216905 10217140 0 . . .; chr2 bed2gff . 113299870 113300125 0 . . .; chr17 bed2gff . 42343979 42344264 0 . . .; chr10 bed2gff . 75503954 75504263 0 . . .; chr12 bed2gff . 132195327 132195740 0 . . .; chr4 bed2gff . 492858 493103 0 . . .; 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chr16 bed2gff . 11945351 11945591 0 . . .; chr20 bed2gff . 1099052 1099329 0 . . .; chr11 bed2gff . 86013059 86013396 0 . . .; chr8 bed2gff . 146017699 146017958 0 . . .; chr20 bed2gff . 62289515 62289802 0 . . .; chr1 bed2gff . 179846856 179847113 0 . . .; chr21 bed2gff . 47706044 47706387 0 . . .; chr6 bed2gff . 3069065 3069362 0 . . .; chr9 bed2gff . 132565296 132565564 0 . . .; chr19 bed2gff . 8617695 8617967 0 . . .; chr13 bed2gff . 29233103 29233353 0 . . .; chr16 bed2gff . 1755950 1756280 0 . . .; chr7 bed2gff . 108210057 108210319 0 . . .; chr16 bed2gff . 67225919 67226171 0 . . .; chr7 bed2gff . 99149647 99149903 0 . . .; chr17 bed2gff . 73042985 73043305 0 . . .; chr22 bed2gff . 29949631 29949893 0 . . .; chr14 bed2gff . 105282311 105282561 0 . . .; chr17 bed2gff . 80023596 80023842 0 . . .; chr6 bed2gff . 28192897 28193165 0 . . .; chr1 bed2gff . 40506224 40506584 0 . . .; chr17 bed2gff . 29233159 29233414 0 . . .; chr19 bed2gff . 44439332 44439615 0 . . .; chr1 bed2gff . 203830582 203830852 0 . . .; chr8 bed2gff . 67837672 67837919 0 . . .; chr10 bed2gff . 44101721 44101976 0 . . .; chr1 bed2gff . 38325162 38325419 0 . . .; chr19 bed2gff . 14800718 14800984 0 . . .; chr17 bed2gff . 26684482 26684775 0 . . .; chr4 bed2gff . 77069511 77069813 0 . . .; chr11 bed2gff . 118230137 118230413 0 . . .; chr20 bed2gff . 60961944 60962250 0 . . .; chr1 bed2gff . 40997089 40997347 0 . . .; chr11 bed2gff . 65337691 65338024 0 . . .; chr4 bed2gff . 71553953 71554298 0 . . .; chr6 bed2gff . 32143783 32144035 0 . . .; chr16 bed2gff . 2892591 2892871 0 . . .; chr3 bed2gff . 44690074 44690348 0 . . .; chr9 bed2gff . 131534118 131534389 0 . . .; chr1 bed2gff . 43855352 43855665 0 . . .; chr11 bed2gff . 3078572 3078852 0 . . .; chr7 bed2gff . 1543919 1544199 0 . . .; chr7 bed2gff . 97601561 97601817 0 . . .; chr17 bed2gff . 56595473 56595790 0 . . .; chr8 bed2gff . 117778603 117778847 0 . . .; chr1 bed2gff . 118472175 118472454 0 . . .; chr1 bed2gff . 84944773 84945048 0 . . .; chr17 bed2gff . 40729631 40729896 0 . . .; chr19 bed2gff . 55791383 55791622 0 . . .; chr5 bed2gff . 16465803 16466081 0 . . .; chr12 bed2gff . 133562809 133563081 0 . . .; chr17 bed2gff . 41561094 41561457 0 . . .; chr10 bed2gff . 96122615 96122874 0 . . .; chr19 bed2gff . 11546298 11546530 0 . . .; chr11 bed2gff . 32605227 32605476 0 . . .; chr19 bed2gff . 12780155 12780565 0 . . .; chr12 bed2gff . 76742080 76742355 0 . . .; chr22 bed2gff . 46731449 46731708 0 . . .; chr19 bed2gff . 46366437 46366707 0 . . .; chr16 bed2gff . 24740829 24741063 0 . . .; chr15 bed2gff . 76196066 76196339 0 . . .; chr1 bed2gff . 109618506 109618768 0 . . .; chr6 bed2gff . 30034819 30035107 0 . . .; chr9 bed2gff . 128469390 128469636 0 . . .; chr17 bed2gff . 45000359 45000622 0 . . .; chr18 bed2gff . 812321 812574 0 . . .; chrX bed2gff . 119077643 119077884 0 . . .; chr3 bed2gff . 50264908 50265154 0 . . .; chr5 bed2gff . 80597279 80597528 0 . . .; chr7 bed2gff . 92076587 92076879 0 . . .; chr1 bed2gff . 28415020 28415267 0 . . .; chr11 bed2gff . 2421427 2421906 0 . . .; chr19 bed2gff . 59066249 59066565 0 . . .; chr7 bed2gff . 99613058 99613302 0 . . .; chr5 bed2gff . 176778546 176778844 0 . . .; chr11 bed2gff . 61197392 61197708 0 . . .; chr6 bed2gff . 31633514 31633781 0 . . .; chr5 bed2gff . 149380009 149380350 0 . . .; chr2 bed2gff . 85839089 85839330 0 . . .; chr19 bed2gff . 13261040 13261302 0 . . .; chr3 bed2gff . 180319786 180320072 0 . . .; chr11 bed2gff . 93517282 93517513 0 . . .; chr12 bed2gff . 69864021 69864287 0 . . .; chr12 bed2gff . 56511895 56512137 0 . . .; chr16 bed2gff . 81779864 81780106 0 . . .; chr11 bed2gff . 62389489 62389776 0 . . .; chr2 bed2gff . 201753878 201754199 0 . . .; chr1 bed2gff . 149899588 149899827 0 . . .; chr1 bed2gff . 2323023 2323385 0 . . .; chr14 bed2gff . 90722761 90722997 0 . . .; chr12 bed2gff . 110888004 110888300 0 . . .; chr19 bed2gff . 633508 633760 0 . . .; chr1 bed2gff . 38019784 38020041 0 . . .; chr11 bed2gff . 18655826 18656118 0 . . .; chr1 bed2gff . 213224469 213224710 0 . . .; chr11 bed2gff . 64084933 64085218 0 . . .; chr7 bed2gff . 129598555 129598810 0 . . .; chr2 bed2gff . 118845844 118846096 0 . . .; chr15 bed2gff . 89787068 89787314 0 . . .; chr6 bed2gff . 41755235 41755483 0 . . .; chr7 bed2gff . 134331288 134331676 0 . . .; chr3 bed2gff . 150264329 150264643 0 . . .; chr10 bed2gff . 105156162 105156499 0 . . .; chr19 bed2gff . 14192018 14192371 0 . . .; chr19 bed2gff . 58071141 58071369 0 . . .; chr8 bed2gff . 146052790 146053034 0 . . .; chr10 bed2gff . 74927729 74927985 0 . . .; chr12 bed2gff . 6602405 6602657 0 . . .; chr20 bed2gff . 33999679 33999924 0 . . .; chr1 bed2gff . 36396576 36396967 0 . . .; chr1 bed2gff . 203651937 203652199 0 . . .; chr19 bed2gff . 56186357 56186687 0 . . .; chr4 bed2gff . 41937005 41937262 0 . . .; chr11 bed2gff . 3400239 3400516 0 . . .; chr9 bed2gff . 114393368 114393629 0 . . .; chr16 bed2gff . 1832684 1832978 0 . . .; chr11 bed2gff . 64863470 64863773 0 . . .; chr16 bed2gff . 2021826 2022079 0 . . .; chr10 bed2gff . 44069945 44070207 0 . . .; chr19 bed2gff . 4723675 4724048 0 . . .; chr4 bed2gff . 56719702 56719937 0 . . .; chr16 bed2gff . 734321 734575 0 . . .; chrX bed2gff . 1710313 1710591 0 . . .; chr17 bed2gff . 40306911 40307200 0 . . .; chr19 bed2gff . 56092219 56092444 0 . . .; chr17 bed2gff . 75084605 75084852 0 . . .; chr15 bed2gff . 55489050 55489303 0 . . .; chr15 bed2gff . 65903377 65903630 0 . . .; chr19 bed2gff . 46195088 46195335 0 . . .; chr1 bed2gff . 150266141 150266383 0 . . .; chr10 bed2gff . 71930160 71930411 0 . . .; chr9 bed2gff . 140118016 140118287 0 . . .; chr20 bed2gff . 60757935 60758201 0 . . .; chr16 bed2gff . 56485164 56485441 0 . . .; chr11 bed2gff . 62554709 62554962 0 . . .; chr16 bed2gff . 23652667 23652903 0 . . .; chr15 bed2gff . 75660836 75661118 0 . . .; chr1 bed2gff . 25558893 25559188 0 . . .; chr20 bed2gff . 5093634 5093891 0 . . .; chrX bed2gff . 100075214 100075473 0 . . .; chr1 bed2gff . 3566555 3566807 0 . . .; chr14 bed2gff . 74353413 74353669 0 . . .; chr17 bed2gff . 1945177 1945445 0 . . .; chr19 bed2gff . 49497016 49497239 0 . . .; chr9 bed2gff . 127703264 127703518 0 . . .; chr1 bed2gff . 1259956 1260183 0 . . .; chr2 bed2gff . 224822010 224822233 0 . . .; chr1 bed2gff . 110091048 110091317 0 . . .; chr10 bed2gff . 15902412 15902693 0 . . .; chr21 bed2gff . 37692339 37692598 0 . . .; chr8 bed2gff . 9413265 9413491 0 . . .; chr1 bed2gff . 204485371 204485648 0 . . .; chr19 bed2gff . 19626893 19627156 0 . . .; chr1 bed2gff . 224622437 224622668 0 . . .; chr19 bed2gff . 6279907 6280204 0 . . .; chr6 bed2gff . 30539107 30539364 0 . . .; chr13 bed2gff . 115000193 115000439 0 . . .; chr4 bed2gff . 119606391 119606637 0 . . .; chr3 bed2gff . 50606771 50607014 0 . . .; chr15 bed2gff . 83419150 83419393 0 . . .; chr12 bed2gff . 49412479 49412764 0 . . .; chr5 bed2gff . 140044247 140044517 0 . . .; chr9 bed2gff . 140100012 140100242 0 . . .; chr1 bed2gff . 160001665 160001925 0 . . .; chr6 bed2gff . 43655443 43655668 0 . . .; chr11 bed2gff . 62599072 62599326 0 . . .; chr11 bed2gff . 94706657 94706895 0 . . .; chr9 bed2gff . 129567159 129567399 0 . . .; chr11 bed2gff . 64885065 64885321 0 . . .; chr10 bed2gff . 102747144 102747420 0 . . .; chr8 bed2gff . 21867670 21867893 0 . . .; chr8 bed2gff . 27630030 27630288 0 . . .; chr5 bed2gff . 75012842 75013077 0 . . .; chr10 bed2gff . 12238026 12238278 0 . . .; chr12 bed2gff . 6772190 6772599 0 . . .; chr11 bed2gff . 117014829 117015123 0 . . .; chr20 bed2gff . 55043566 55043810 0 . . .; chr9 bed2gff . 140149616 140149862 0 . . .; chr3 bed2gff . 178865770 178866013 0 . . .; chr10 bed2gff . 52310124 52310439 0 . . .; chr9 bed2gff . 135282127 135282353 0 . . .; chr1 bed2gff . 150293864 150294122 0 . . .; chr11 bed2gff . 65729031 65729293 0 . . .; chr1 bed2gff . 40723527 40724002 0 . . .; chr10 bed2gff . 135207528 135207810 0 . . .; chr16 bed2gff . 30366532 30366782 0 . . .; chr9 bed2gff . 127631291 127631515 0 . . .; chr1 bed2gff . 44501663 44501935 0 . . .; chr16 bed2gff . 20817684 20817919 0 . . .; chr16 bed2gff . 31128853 31129096 0 . . .; chr16 bed2gff . 30933694 30933969 0 . . .; chr7 bed2gff . 91509917 91510189 0 . . .; chr4 bed2gff . 4249856 4250137 0 . . .; chr22 bed2gff . 20104674 20104975 0 . . .; chr12 bed2gff . 120105559 120105893 0 . . .; chr8 bed2gff . 33342570 33342802 0 . . .; chr16 bed2gff . 57496431 57496665 0 . . .; chr17 bed2gff . 48450420 48450700 0 . . .; chr8 bed2gff . 125551204 125551448 0 . . .; chr14 bed2gff . 105957214 105957456 0 . . .; chr6 bed2gff . 30923363 30923615 0 . . .; chr3 bed2gff . 121468701 121468944 0 . . .; chr11 bed2gff . 33966342 33966618 0 . . .; chr2 bed2gff . 99797501 99797719 0 . . .; chr19 bed2gff . 8070519 8070780 0 . . .; chr3 bed2gff . 47554851 47555125 0 . . .; chr9 bed2gff . 138853135 138853462 0 . . .; chr2 bed2gff . 9563634 9563872 0 . . .; chr11 bed2gff . 46958108 46958369 0 . . .; chr17 bed2gff . 44271409 44271640 0 . . .;