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comparison test-data/zika/db/PRV.gff @ 11:38b91a3190cd draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ivar/ commit a14db40361bcb2ee608bccd9222e1654aaea3324
author iuc
date Wed, 11 Jan 2023 09:53:09 +0000
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10:584beffa972b 11:38b91a3190cd
1 ##gff-version 3
2 #!gff-spec-version 1.21
3 #!processor NCBI annotwriter
4 #!genome-build ViralProj36615
5 #!genome-build-accession NCBI_Assembly:GCF_000882815.3
6 ##sequence-region NC_012532.1 1 10794
7 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=64320
8 NC_012532.1 RefSeq region 1 10794 . + . ID=NC_012532.1:1..10794;Dbxref=taxon:64320;country=Uganda;gbkey=Src;genome=genomic;mol_type=genomic RNA;nat-host=sentinel monkey;note=mosquito-borne flavivirus;strain=MR 766
9 NC_012532.1 RefSeq five_prime_UTR 1 106 . + . ID=id-NC_012532.1:1..106;gbkey=5'UTR
10 NC_012532.1 RefSeq gene 107 10366 . + . ID=gene-ZIKV_gp1;Dbxref=GeneID:7751225;Name=POLY;gbkey=Gene;gene=POLY;gene_biotype=protein_coding;locus_tag=ZIKV_gp1
11 NC_012532.1 RefSeq CDS 107 10366 . + 0 ID=cds-YP_002790881.1;Parent=gene-ZIKV_gp1;Dbxref=Genbank:YP_002790881.1,GeneID:7751225;Name=YP_002790881.1;gbkey=CDS;gene=POLY;locus_tag=ZIKV_gp1;product=polyprotein;protein_id=YP_002790881.1
12 NC_012532.1 RefSeq mature_protein_region_of_CDS 107 472 . + . ID=id-YP_002790881.1:1..122;Parent=cds-YP_002790881.1;gbkey=Prot;product=anchored capsid protein ancC;protein_id=YP_009227206.1
13 NC_012532.1 RefSeq mature_protein_region_of_CDS 107 418 . + . ID=id-YP_002790881.1:1..104;Parent=cds-YP_002790881.1;gbkey=Prot;product=capsid protein C;protein_id=YP_009227196.1
14 NC_012532.1 RefSeq mature_protein_region_of_CDS 473 976 . + . ID=id-YP_002790881.1:123..290;Parent=cds-YP_002790881.1;gbkey=Prot;product=membrane glycoprotein precursor prM;protein_id=YP_009227197.1
15 NC_012532.1 RefSeq mature_protein_region_of_CDS 473 751 . + . ID=id-YP_002790881.1:123..215;Parent=cds-YP_002790881.1;gbkey=Prot;product=protein pr;protein_id=YP_009227207.1
16 NC_012532.1 RefSeq mature_protein_region_of_CDS 752 976 . + . ID=id-YP_002790881.1:216..290;Parent=cds-YP_002790881.1;gbkey=Prot;product=membrane glycoprotein M;protein_id=YP_009227208.1
17 NC_012532.1 RefSeq mature_protein_region_of_CDS 977 2476 . + . ID=id-YP_002790881.1:291..790;Parent=cds-YP_002790881.1;gbkey=Prot;product=envelope protein E;protein_id=YP_009227198.1
18 NC_012532.1 RefSeq mature_protein_region_of_CDS 2477 3532 . + . ID=id-YP_002790881.1:791..1142;Parent=cds-YP_002790881.1;gbkey=Prot;product=nonstructural protein NS1;protein_id=YP_009227199.1
19 NC_012532.1 RefSeq mature_protein_region_of_CDS 3533 4210 . + . ID=id-YP_002790881.1:1143..1368;Parent=cds-YP_002790881.1;gbkey=Prot;product=nonstructural protein NS2A;protein_id=YP_009227200.1
20 NC_012532.1 RefSeq mature_protein_region_of_CDS 4211 4600 . + . ID=id-YP_002790881.1:1369..1498;Parent=cds-YP_002790881.1;gbkey=Prot;product=nonstructural protein NS2B;protein_id=YP_009227201.1
21 NC_012532.1 RefSeq mature_protein_region_of_CDS 4601 6451 . + . ID=id-YP_002790881.1:1499..2115;Parent=cds-YP_002790881.1;gbkey=Prot;product=nonstructural protein NS3;protein_id=YP_009227202.1
22 NC_012532.1 RefSeq mature_protein_region_of_CDS 6452 6832 . + . ID=id-YP_002790881.1:2116..2242;Parent=cds-YP_002790881.1;gbkey=Prot;product=nonstructural protein NS4A;protein_id=YP_009227203.1
23 NC_012532.1 RefSeq mature_protein_region_of_CDS 6833 6901 . + . ID=id-YP_002790881.1:2243..2265;Parent=cds-YP_002790881.1;gbkey=Prot;product=protein 2K;protein_id=YP_009227209.1
24 NC_012532.1 RefSeq mature_protein_region_of_CDS 6902 7654 . + . ID=id-YP_002790881.1:2266..2516;Parent=cds-YP_002790881.1;gbkey=Prot;product=nonstructural protein NS4B;protein_id=YP_009227204.1
25 NC_012532.1 RefSeq mature_protein_region_of_CDS 7655 10363 . + . ID=id-YP_002790881.1:2517..3419;Parent=cds-YP_002790881.1;gbkey=Prot;product=RNA-dependent RNA polymerase NS5;protein_id=YP_009227205.1
26 NC_012532.1 RefSeq three_prime_UTR 10367 10794 . + . ID=id-NC_012532.1:10367..10794;gbkey=3'UTR
27 ###