Mercurial > repos > iuc > khmer_filter_abundance

diff filter-below-abund.py @ 5:a4970dfc331c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/khmer/ commit 19ea4feff5ccf3744c549b9a67259947a1cb90ba
author iuc
date Sat, 21 Jan 2017 14:43:16 -0500
parents 1ab159863b55
children dbe616d126b1
line wrap: on
line diff
--- a/filter-below-abund.py	Mon Nov 14 17:50:39 2016 -0500
+++ b/filter-below-abund.py	Sat Jan 21 14:43:16 2017 -0500
@@ -34,18 +34,17 @@
 #
 # Contact: khmer-project@idyll.org
 from __future__ import print_function
+
+import os
 import sys
-import os
+
 import khmer
 from khmer.thread_utils import ThreadedSequenceProcessor, verbose_fasta_iter
 
 WORKER_THREADS = 8
 GROUPSIZE = 100
-
 CUTOFF = 50
 
-###
-
 
 def main():
     counting_ht = sys.argv[1]