annotate test-data/Kleborate_results_vanilla.txt @ 1:374b2e9ade86 draft

planemo upload for repository https://github.com/katholt/Kleborate commit a405d2b34f603ba0c026d76c3cfff70746ea14f9
author iuc
date Sun, 22 Jan 2023 10:52:38 +0000
parents 383036561810
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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383036561810 planemo upload for repository https://github.com/katholt/Kleborate commit 7a486326f6d0ca87c1c41e857732319d31372799
iuc
parents:
diff changeset
1 strain species species_match contig_count N50 largest_contig total_size ambiguous_bases QC_warnings ST virulence_score Yersiniabactin YbST Colibactin CbST Aerobactin AbST Salmochelin SmST RmpADC RmST rmpA2 wzi K_locus Chr_ST gapA infB mdh pgi phoE rpoB tonB ybtS ybtX ybtQ ybtP ybtA irp2 irp1 ybtU ybtT ybtE fyuA clbA clbB clbC clbD clbE clbF clbG clbH clbI clbL clbM clbN clbO clbP clbQ iucA iucB iucC iucD iutA iroB iroC iroD iroN rmpA rmpD rmpC spurious_virulence_hits
383036561810 planemo upload for repository https://github.com/katholt/Kleborate commit 7a486326f6d0ca87c1c41e857732319d31372799
iuc
parents:
diff changeset
2 KP011_S63.scfd unknown 48 50378 86784 922210 yes (425) ambiguous_bases NA 0 - 0 - 0 - 0 - 0 - 0 - wzi114 KL30 (KL2, KL8, KL111) NA - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
383036561810 planemo upload for repository https://github.com/katholt/Kleborate commit 7a486326f6d0ca87c1c41e857732319d31372799
iuc
parents:
diff changeset
3 KP012_S64.scfd unknown 54 48797 70916 961311 yes (413) ambiguous_bases NA 0 - 0 - 0 - 0 - 0 - 0 - - - NA - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -