Mercurial > repos > iuc > krakentools_beta_diversity

annotate test-data/extract_kraken_reads/kraken2.report @ 3:b33f117e9b67 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
author iuc
date Wed, 15 Mar 2023 18:18:52 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
3
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
1 4.29 24 24 U 0 unclassified
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
2 95.71 536 0 R 1 root
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
3 95.00 532 0 D 10239 Viruses
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
4 88.75 497 0 D1 2731341 Duplodnaviria
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
5 88.75 497 0 D2 2731360 Heunggongvirae
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
6 88.75 497 0 P 2731361 Peploviricota
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
7 88.75 497 0 C 2731363 Herviviricetes
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
8 88.75 497 0 O 548681 Herpesvirales
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
9 88.75 497 0 F 10292 Herpesviridae
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
10 88.75 497 0 F1 10293 Alphaherpesvirinae
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
11 88.75 497 0 G 180255 Iltovirus
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
12 88.75 497 497 S 10386 Gallid alphaherpesvirus 1
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
13 6.25 35 0 D1 2559587 Riboviria
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
14 6.25 35 0 K 2732396 Orthornavirae
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
15 6.25 35 0 P 2497569 Negarnaviricota
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
16 6.25 35 0 P1 2497570 Haploviricotina
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
17 6.25 35 0 C 2497574 Monjiviricetes
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
18 6.25 35 0 O 11157 Mononegavirales
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
19 6.25 35 0 F 11158 Paramyxoviridae
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
20 6.25 35 12 G 260963 Avulavirus
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
21 2.68 15 0 G1 336096 unclassified Avulavirus
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
22 2.68 15 15 S 204987 Goose paramyxovirus SF02
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
23 1.25 7 7 S 11176 Avian avulavirus 1
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
24 0.18 1 1 S 1305716 Avian avulavirus 12
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
25 0.71 4 0 R1 131567 cellular organisms
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
26 0.36 2 0 D 2 Bacteria
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
27 0.36 2 0 P 1224 Proteobacteria
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
28 0.36 2 0 C 1236 Gammaproteobacteria
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
29 0.36 2 0 O 72274 Pseudomonadales
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
30 0.36 2 0 F 468 Moraxellaceae
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
31 0.36 2 0 G 469 Acinetobacter
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
32 0.36 2 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
33 0.36 2 2 S 470 Acinetobacter baumannii
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
34 0.36 2 0 D 2759 Eukaryota
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
35 0.18 1 0 D1 33154 Opisthokonta
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
36 0.18 1 0 K 33208 Metazoa
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
37 0.18 1 0 K1 6072 Eumetazoa
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
38 0.18 1 0 K2 33213 Bilateria
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
39 0.18 1 0 K3 33511 Deuterostomia
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
40 0.18 1 0 P 7711 Chordata
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
41 0.18 1 0 P1 89593 Craniata
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
42 0.18 1 0 P2 7742 Vertebrata
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
43 0.18 1 0 P3 7776 Gnathostomata
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
44 0.18 1 0 P4 117570 Teleostomi
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
45 0.18 1 0 P5 117571 Euteleostomi
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
46 0.18 1 0 P6 8287 Sarcopterygii
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
47 0.18 1 0 P7 1338369 Dipnotetrapodomorpha
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
48 0.18 1 0 P8 32523 Tetrapoda
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
49 0.18 1 0 P9 32524 Amniota
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
50 0.18 1 0 C 40674 Mammalia
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
51 0.18 1 0 C1 32525 Theria
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
52 0.18 1 0 C2 9347 Eutheria
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
53 0.18 1 0 C3 1437010 Boreoeutheria
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
54 0.18 1 0 C4 314146 Euarchontoglires
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
55 0.18 1 0 O 9443 Primates
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
56 0.18 1 0 O1 376913 Haplorrhini
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
57 0.18 1 0 O2 314293 Simiiformes
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
58 0.18 1 0 O3 9526 Catarrhini
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
59 0.18 1 0 O4 314295 Hominoidea
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
60 0.18 1 0 F 9604 Hominidae
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
61 0.18 1 0 F1 207598 Homininae
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
62 0.18 1 0 G 9605 Homo
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
63 0.18 1 1 S 9606 Homo sapiens
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
64 0.18 1 0 D1 2698737 Sar
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
65 0.18 1 0 D2 33630 Alveolata
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
66 0.18 1 0 P 5794 Apicomplexa
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
67 0.18 1 0 C 422676 Aconoidasida
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
68 0.18 1 0 O 5819 Haemosporida
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
69 0.18 1 0 F 1639119 Plasmodiidae
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
70 0.18 1 0 G 5820 Plasmodium
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
71 0.18 1 0 G1 418103 Plasmodium (Plasmodium)
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
72 0.18 1 0 S 5850 Plasmodium knowlesi
b33f117e9b67 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
iuc
parents:
diff changeset
73 0.18 1 1 S1 5851 Plasmodium knowlesi strain H