annotate mageck_macros.xml @ 0:eab37e8fea75 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mageck commit 71cef018eec5ee7ff7f3853599c027e80e2637fe

<?xml version="1.0"?>
<macros>
    <token name="@VERSION@">0.5.7</token>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="@VERSION@">mageck</requirement>
            <!-- needed for pdf report outputs -->
            <requirement type="package" version="3.0.1">r-gplots</requirement>
            <requirement type="package" version="1.8_2">r-xtable</requirement>
            <yield/>
        </requirements>
    </xml>
    <xml name="version">
        <version_command>mageck -v </version_command>
    </xml>
    <xml name="citations">
        <citations>
            <citation type="doi">10.1186/s13059-014-0554-4</citation>
        </citations>
    </xml>
    <xml name="sort_criteria">
        <param name="sort_criteria" argument="--sort-criteria" type="select" label="Sorting criteria">
            <option value="neg" selected="True">Negative selection</option>
            <option value="pos">positive selection</option>
        </param>
      </xml>
</macros>