Mercurial > repos > iuc > medaka_consensus_pipeline

changeset 4:a1b70f038b4a draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/medaka commit c02f74da66f51b431b7cd8bd0d1cffde267e3332"
author iuc
date Tue, 13 Oct 2020 15:59:11 +0000
parents 35666d44fe7a
children b35de691c42c
files macros.xml medaka_consensus.xml
diffstat 2 files changed, 2 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Tue Sep 01 03:08:04 2020 -0400
+++ b/macros.xml	Tue Oct 13 15:59:11 2020 +0000
@@ -5,7 +5,7 @@
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@TOOL_VERSION@">medaka</requirement>
-            <requirement type="package" version="1.4.1">scipy</requirement>
+            <yield />
         </requirements>
     </xml>
     <xml name="version_command">
--- a/medaka_consensus.xml	Tue Sep 01 03:08:04 2020 -0400
+++ b/medaka_consensus.xml	Tue Oct 13 15:59:11 2020 +0000
@@ -1,4 +1,4 @@
-<tool id="medaka_consensus_pipeline" name="medaka: Consensus pipeline" version="@TOOL_VERSION@+galaxy2" profile="@PROFILE@">
+<tool id="medaka_consensus_pipeline" name="medaka consensus pipeline" version="@TOOL_VERSION@+galaxy2" profile="@PROFILE@">
     <description>Assembly polishing via neural networks</description>
     <macros>
         <import>macros.xml</import>
@@ -76,13 +76,11 @@
             </output>
             <output name="out_probs">
                 <assert_contents>
-                    <!-- <has_size value="192187" delta="100"/> -->
                     <has_size value="165271" delta="100"/>
                 </assert_contents>
             </output>
             <output name="out_calls">
                 <assert_contents>
-                    <!-- <has_size value="533242" delta="100"/> -->
                     <has_size value="343197" delta="100"/>
                 </assert_contents>
             </output>
@@ -104,13 +102,11 @@
             <output name="out_probs">
                 <assert_contents>
                     <has_size value="166251" delta="100"/>
-                    <!-- <has_size value="192710" delta="100"/> -->
                 </assert_contents>
             </output>
             <output name="out_calls">
                 <assert_contents>
                     <has_size value="343197" delta="100"/>
-                    <!-- <has_size value="533163" delta="100"/> -->
                 </assert_contents>
             </output>
             <output name="out_draft">