Mercurial > repos > iuc > medaka_variant_pipeline

view test-data/annotate_vcf_test.vcf @ 4:5c959a2dde5f draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/medaka commit c02f74da66f51b431b7cd8bd0d1cffde267e3332"
author iuc
date Tue, 13 Oct 2020 15:59:54 +0000
parents 148f32860445
children
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##fileformat=VCFv4.1
##medaka_version=1.0.3
##contig=<ID=NC_045512.2>
##FORMAT=<ID=GT,Number=1,Type=String,Description="Medaka genotype.">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Medaka genotype quality score">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	SAMPLE
NC_045512.2	45	.	G	C	46.359	PASS		GT:GQ	1:46
NC_045512.2	685	.	AAAGTCATTT	A	260.487	PASS		GT:GQ	1:260
NC_045512.2	1813	.	TA	T	11.034	PASS		GT:GQ	1:11