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view test-data/meme_output_test1.xml @ 20:faa378fa0c81 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 89ee0af6e955ff964b7984d77ad536e0a9154278
author iuc
date Mon, 14 Jul 2025 21:33:26 +0000
parents 19237efe98d1
children
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<alphabet_array>
<value letter_id="A">-32</value>
<value letter_id="C">-680</value>
<value letter_id="D">91</value>
<value letter_id="E">77</value>
<value letter_id="F">7</value>
<value letter_id="G">138</value>
<value letter_id="H">-20</value>
<value letter_id="I">55</value>
<value letter_id="K">64</value>
<value letter_id="L">107</value>
<value letter_id="M">11</value>
<value letter_id="N">150</value>
<value letter_id="P">142</value>
<value letter_id="Q">72</value>
<value letter_id="R">87</value>
<value letter_id="S">396</value>
<value letter_id="T">-148</value>
<value letter_id="V">221</value>
<value letter_id="W">-140</value>
<value letter_id="Y">-36</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-11</value>
<value letter_id="C">-680</value>
<value letter_id="D">89</value>
<value letter_id="E">76</value>
<value letter_id="F">7</value>
<value letter_id="G">137</value>
<value letter_id="H">-21</value>
<value letter_id="I">55</value>
<value letter_id="K">63</value>
<value letter_id="L">107</value>
<value letter_id="M">10</value>
<value letter_id="N">149</value>
<value letter_id="P">141</value>
<value letter_id="Q">71</value>
<value letter_id="R">87</value>
<value letter_id="S">396</value>
<value letter_id="T">-239</value>
<value letter_id="V">220</value>
<value letter_id="W">-140</value>
<value letter_id="Y">-36</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-79</value>
<value letter_id="C">41</value>
<value letter_id="D">4</value>
<value letter_id="E">21</value>
<value letter_id="F">-7</value>
<value letter_id="G">44</value>
<value letter_id="H">-62</value>
<value letter_id="I">42</value>
<value letter_id="K">-5</value>
<value letter_id="L">99</value>
<value letter_id="M">0</value>
<value letter_id="N">99</value>
<value letter_id="P">138</value>
<value letter_id="Q">52</value>
<value letter_id="R">42</value>
<value letter_id="S">399</value>
<value letter_id="T">-46</value>
<value letter_id="V">223</value>
<value letter_id="W">-173</value>
<value letter_id="Y">-68</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">11</value>
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<value letter_id="I">46</value>
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<value letter_id="P">138</value>
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<value letter_id="S">397</value>
<value letter_id="T">-235</value>
<value letter_id="V">220</value>
<value letter_id="W">-160</value>
<value letter_id="Y">-55</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-596</value>
<value letter_id="C">-820</value>
<value letter_id="D">12</value>
<value letter_id="E">-21</value>
<value letter_id="F">-53</value>
<value letter_id="G">-267</value>
<value letter_id="H">-74</value>
<value letter_id="I">37</value>
<value letter_id="K">16</value>
<value letter_id="L">44</value>
<value letter_id="M">-37</value>
<value letter_id="N">98</value>
<value letter_id="P">31</value>
<value letter_id="Q">9</value>
<value letter_id="R">19</value>
<value letter_id="S">319</value>
<value letter_id="T">212</value>
<value letter_id="V">127</value>
<value letter_id="W">-193</value>
<value letter_id="Y">-95</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">165</value>
<value letter_id="C">-261</value>
<value letter_id="D">70</value>
<value letter_id="E">110</value>
<value letter_id="F">77</value>
<value letter_id="G">-521</value>
<value letter_id="H">-4</value>
<value letter_id="I">147</value>
<value letter_id="K">95</value>
<value letter_id="L">201</value>
<value letter_id="M">90</value>
<value letter_id="N">121</value>
<value letter_id="P">124</value>
<value letter_id="Q">91</value>
<value letter_id="R">107</value>
<value letter_id="S">425</value>
<value letter_id="T">-527</value>
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<value letter_id="W">-95</value>
<value letter_id="Y">8</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-838</value>
<value letter_id="C">-990</value>
<value letter_id="D">-89</value>
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<value letter_id="F">-151</value>
<value letter_id="G">-841</value>
<value letter_id="H">-161</value>
<value letter_id="I">-117</value>
<value letter_id="K">-113</value>
<value letter_id="L">-66</value>
<value letter_id="M">-209</value>
<value letter_id="N">-68</value>
<value letter_id="P">-69</value>
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<value letter_id="R">-91</value>
<value letter_id="S">111</value>
<value letter_id="T">221</value>
<value letter_id="V">-55</value>
<value letter_id="W">-255</value>
<value letter_id="Y">-173</value>
</alphabet_array>
<alphabet_array>
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<value letter_id="Q">-95</value>
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<value letter_id="T">-737</value>
<value letter_id="V">52</value>
<value letter_id="W">-240</value>
<value letter_id="Y">-153</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">134</value>
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<value letter_id="D">0</value>
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<value letter_id="F">-12</value>
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<value letter_id="I">44</value>
<value letter_id="K">-8</value>
<value letter_id="L">96</value>
<value letter_id="M">-9</value>
<value letter_id="N">88</value>
<value letter_id="P">124</value>
<value letter_id="Q">41</value>
<value letter_id="R">36</value>
<value letter_id="S">384</value>
<value letter_id="T">11</value>
<value letter_id="V">216</value>
<value letter_id="W">-177</value>
<value letter_id="Y">-71</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">165</value>
<value letter_id="C">-261</value>
<value letter_id="D">70</value>
<value letter_id="E">110</value>
<value letter_id="F">77</value>
<value letter_id="G">-521</value>
<value letter_id="H">-4</value>
<value letter_id="I">147</value>
<value letter_id="K">95</value>
<value letter_id="L">201</value>
<value letter_id="M">90</value>
<value letter_id="N">121</value>
<value letter_id="P">124</value>
<value letter_id="Q">91</value>
<value letter_id="R">107</value>
<value letter_id="S">425</value>
<value letter_id="T">-527</value>
<value letter_id="V">314</value>
<value letter_id="W">-95</value>
<value letter_id="Y">8</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">147</value>
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<value letter_id="D">89</value>
<value letter_id="E">129</value>
<value letter_id="F">93</value>
<value letter_id="G">-121</value>
<value letter_id="H">12</value>
<value letter_id="I">160</value>
<value letter_id="K">113</value>
<value letter_id="L">217</value>
<value letter_id="M">108</value>
<value letter_id="N">144</value>
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<value letter_id="Q">111</value>
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<value letter_id="V">332</value>
<value letter_id="W">-81</value>
<value letter_id="Y">22</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.240000</value>
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<value letter_id="G">0.680000</value>
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<value letter_id="Y">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.280000</value>
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<value letter_id="T">0.040000</value>
<value letter_id="V">0.000000</value>
<value letter_id="W">0.000000</value>
<value letter_id="Y">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.160000</value>
<value letter_id="C">0.320000</value>
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<value letter_id="E">0.000000</value>
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<value letter_id="T">0.160000</value>
<value letter_id="V">0.000000</value>
<value letter_id="W">0.000000</value>
<value letter_id="Y">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.320000</value>
<value letter_id="C">0.000000</value>
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<value letter_id="E">0.000000</value>
<value letter_id="F">0.000000</value>
<value letter_id="G">0.640000</value>
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<value letter_id="K">0.000000</value>
<value letter_id="L">0.000000</value>
<value letter_id="M">0.000000</value>
<value letter_id="N">0.000000</value>
<value letter_id="P">0.000000</value>
<value letter_id="Q">0.000000</value>
<value letter_id="R">0.000000</value>
<value letter_id="S">0.000000</value>
<value letter_id="T">0.040000</value>
<value letter_id="V">0.000000</value>
<value letter_id="W">0.000000</value>
<value letter_id="Y">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
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<value letter_id="T">0.960000</value>
<value letter_id="V">0.000000</value>
<value letter_id="W">0.000000</value>
<value letter_id="Y">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.960000</value>
<value letter_id="C">0.040000</value>
<value letter_id="D">0.000000</value>
<value letter_id="E">0.000000</value>
<value letter_id="F">0.000000</value>
<value letter_id="G">0.000000</value>
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<value letter_id="V">0.000000</value>
<value letter_id="W">0.000000</value>
<value letter_id="Y">0.000000</value>
</alphabet_array>
<alphabet_array>
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<value letter_id="V">0.000000</value>
<value letter_id="W">0.000000</value>
<value letter_id="Y">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">1.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="D">0.000000</value>
<value letter_id="E">0.000000</value>
<value letter_id="F">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="H">0.000000</value>
<value letter_id="I">0.000000</value>
<value letter_id="K">0.000000</value>
<value letter_id="L">0.000000</value>
<value letter_id="M">0.000000</value>
<value letter_id="N">0.000000</value>
<value letter_id="P">0.000000</value>
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<value letter_id="T">0.000000</value>
<value letter_id="V">0.000000</value>
<value letter_id="W">0.000000</value>
<value letter_id="Y">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.760000</value>
<value letter_id="C">0.000000</value>
<value letter_id="D">0.000000</value>
<value letter_id="E">0.000000</value>
<value letter_id="F">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="H">0.000000</value>
<value letter_id="I">0.000000</value>
<value letter_id="K">0.000000</value>
<value letter_id="L">0.000000</value>
<value letter_id="M">0.000000</value>
<value letter_id="N">0.000000</value>
<value letter_id="P">0.000000</value>
<value letter_id="Q">0.000000</value>
<value letter_id="R">0.000000</value>
<value letter_id="S">0.000000</value>
<value letter_id="T">0.240000</value>
<value letter_id="V">0.000000</value>
<value letter_id="W">0.000000</value>
<value letter_id="Y">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.960000</value>
<value letter_id="C">0.040000</value>
<value letter_id="D">0.000000</value>
<value letter_id="E">0.000000</value>
<value letter_id="F">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="H">0.000000</value>
<value letter_id="I">0.000000</value>
<value letter_id="K">0.000000</value>
<value letter_id="L">0.000000</value>
<value letter_id="M">0.000000</value>
<value letter_id="N">0.000000</value>
<value letter_id="P">0.000000</value>
<value letter_id="Q">0.000000</value>
<value letter_id="R">0.000000</value>
<value letter_id="S">0.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="V">0.000000</value>
<value letter_id="W">0.000000</value>
<value letter_id="Y">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.840000</value>
<value letter_id="C">0.000000</value>
<value letter_id="D">0.000000</value>
<value letter_id="E">0.000000</value>
<value letter_id="F">0.000000</value>
<value letter_id="G">0.120000</value>
<value letter_id="H">0.000000</value>
<value letter_id="I">0.000000</value>
<value letter_id="K">0.000000</value>
<value letter_id="L">0.000000</value>
<value letter_id="M">0.000000</value>
<value letter_id="N">0.000000</value>
<value letter_id="P">0.000000</value>
<value letter_id="Q">0.000000</value>
<value letter_id="R">0.000000</value>
<value letter_id="S">0.000000</value>
<value letter_id="T">0.040000</value>
<value letter_id="V">0.000000</value>
<value letter_id="W">0.000000</value>
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</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[GA][GA][GC][GA]TATA[AT]AA
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_24" position="12" strand="none" pvalue="1.06e-06" >
<left_flank>AAGGCCAGGA</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GCCTGAGAGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_25" position="36" strand="none" pvalue="3.41e-06" >
<left_flank>ACAGGCCCTG</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GCC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_19" position="9" strand="none" pvalue="3.41e-06" >
<left_flank>CAGGCCCTG</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GCCCCAGCAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_9" position="13" strand="none" pvalue="3.41e-06" >
<left_flank>GATTCACTGA</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GGCCCTCTGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_21" position="7" strand="none" pvalue="4.00e-06" >
<left_flank>CCAAGGA</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GCCCCACAAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_13" position="13" strand="none" pvalue="5.01e-06" >
<left_flank>CCACCAGCTT</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AGCCCTGTAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_23" position="15" strand="none" pvalue="6.06e-06" >
<left_flank>ATACCCAGGG</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CCTCAGCAGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="21" strand="none" pvalue="8.67e-06" >
<left_flank>AATCACTGAG</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GTCCCAGGGA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_12" position="18" strand="none" pvalue="8.67e-06" >
<left_flank>CACCAGAGCT</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AGAAGGTTCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_11" position="16" strand="none" pvalue="8.67e-06" >
<left_flank>CACTATTGAA</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>TTTCATTTGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_22" position="2" strand="none" pvalue="1.21e-05" >
<left_flank>GA</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GCCAACATCC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_28" position="32" strand="none" pvalue="1.59e-05" >
<left_flank>CCGGCGGGGC</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
</site>
<right_flank>GGGGCGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_20" position="4" strand="none" pvalue="1.59e-05" >
<left_flank>CAGA</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
</site>
<right_flank>GTTCCGACCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_6" position="15" strand="none" pvalue="1.68e-05" >
<left_flank>CCCACTACTT</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>TCATTCTGAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_14" position="19" strand="none" pvalue="2.03e-05" >
<left_flank>CACCAGCAAG</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GCTCAGGAGT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_4" position="12" strand="none" pvalue="3.06e-05" >
<left_flank>CAGGTCTAAG</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CTTGGAGTCC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_0" position="39" strand="none" pvalue="3.06e-05" >
<left_flank>CCTCGGGACG</left_flank>
<site>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank></right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_18" position="37" strand="none" pvalue="3.82e-05" >
<left_flank>CGTGGTCGCG</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_5" position="0" strand="none" pvalue="3.82e-05" >
<left_flank></left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>ATGGTCCTGT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_29" position="30" strand="none" pvalue="4.02e-05" >
<left_flank>GCTGCCGGTG</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
</site>
<right_flank>GCCCTGGCG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_1" position="27" strand="none" pvalue="5.52e-05" >
<left_flank>AGTCACAAGT</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GGGTCGCACG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_3" position="14" strand="none" pvalue="5.94e-05" >
<left_flank>CCCAGGTTTC</left_flank>
<site>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>TCGCCGCACC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_16" position="22" strand="none" pvalue="6.78e-05" >
<left_flank>AGTTTCAGTT</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>attatataac</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="2" strand="none" pvalue="2.08e-04" >
<left_flank>TC</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
</site>
<right_flank>AAATGTTCCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_8" position="13" strand="none" pvalue="4.05e-04" >
<left_flank>TATAACTCAG</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>TAATTTGTAC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
</motifs>
<scanned_sites_summary p_thresh="0.0001">
<scanned_sites sequence_id="sequence_0" pvalue="1.22e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="39" pvalue="3.06e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_1" pvalue="2.21e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="27" pvalue="5.52e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_2" pvalue="7.29e-01" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_3" pvalue="2.37e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="14" pvalue="5.94e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_4" pvalue="1.22e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="12" pvalue="3.06e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_5" pvalue="1.53e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="0" pvalue="3.82e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_6" pvalue="6.70e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="15" pvalue="1.68e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_7" pvalue="1.81e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="4" pvalue="4.54e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_8" pvalue="1.61e-02" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_9" pvalue="1.36e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="13" pvalue="3.41e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_10" pvalue="1.99e-01" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_11" pvalue="3.47e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="16" pvalue="8.67e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_12" pvalue="3.47e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="18" pvalue="8.67e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_13" pvalue="2.01e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="13" pvalue="5.01e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_14" pvalue="8.11e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="19" pvalue="2.03e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_15" pvalue="3.47e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="21" pvalue="8.67e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_16" pvalue="2.71e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="22" pvalue="6.78e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_17" pvalue="8.23e-02" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_18" pvalue="1.53e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="37" pvalue="3.82e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_19" pvalue="1.36e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="9" pvalue="3.41e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_20" pvalue="6.37e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="4" pvalue="1.59e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_21" pvalue="1.60e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="7" pvalue="4.00e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_22" pvalue="4.83e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="2" pvalue="1.21e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_23" pvalue="2.43e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="15" pvalue="6.06e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_24" pvalue="4.26e-05" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="12" pvalue="1.06e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_25" pvalue="1.36e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="36" pvalue="3.41e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_26" pvalue="4.30e-02" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_27" pvalue="4.30e-02" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_28" pvalue="6.37e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="32" pvalue="1.59e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_29" pvalue="1.61e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="none" position="30" pvalue="4.02e-05"/>
</scanned_sites>
</scanned_sites_summary>
</MEME>