Mercurial > repos > iuc > migmap
diff migmap.xml @ 4:29ec7b3a458b draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/migmap commit e32ce67ab5bbb46569f220489b72ecc11b7a0fd3"
author | iuc |
---|---|
date | Fri, 20 Nov 2020 14:26:40 +0000 |
parents | 587fa797ede9 |
children | 2c9f2a24f7a4 |
line wrap: on
line diff
--- a/migmap.xml Thu Dec 05 05:58:28 2019 -0500 +++ b/migmap.xml Fri Nov 20 14:26:40 2020 +0000 @@ -1,4 +1,4 @@ -<tool id="migmap" name="MiGMAP" version="@TOOL_VERSION@"> +<tool id="migmap" name="MiGMAP" version="@TOOL_VERSION@+galaxy1"> <description>mapper for full-length T- and B-cell repertoire sequencing </description> <macros> @@ -7,7 +7,7 @@ <requirements> <requirement type="package" version="@TOOL_VERSION@">migmap</requirement> </requirements> - <command detect_errors='exit_code'><![CDATA[ + <command detect_errors='aggressive'><![CDATA[ export IGBLAST_PATH=\$(dirname \$(which igblastn)) && mkdir -p temp_db/igblast && ln -s "\${IGBLAST_PATH}/../share/igblast/bin/" ./temp_db/igblast &&