Mercurial > repos > iuc > mirnature
diff test-data/test_all_homology.txt @ 0:dd2f87ccbd2c draft default tip
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
| author | iuc |
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| date | Sun, 11 Dec 2022 22:28:10 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_all_homology.txt Sun Dec 11 22:28:10 2022 +0000 @@ -0,0 +1,57 @@ + +.__________________________________________________________________________. +| | +|________________________________________________.........---------........| + .--. . . . . ._________________________. + o | )|\ | / \ _|_ | | +.--.--. . |--' | \ | /___\ | . . .--..-. |........---------........| +| | | | | \ | \| / \ | | | | (.-' ._______. ._______. +' ' `--' `-' `' '' ``-'`--`-' `--' |.......| |.......| +Computational detection of microRNA candidates +v.1.1 Sept 21th, 2022 +Cristian A. Velandia-Huerto, Jöerg Fallmann, Peter F. Stadler +Bioinformatics Leipzig +University of Leipzig + +[2m[34m[PROCESS] Generating a carbon-copy of your Unsp genome +[0m[0m[1m[32m[RESULT] I am ready to run miRNAture +[0m[0m[2m[34m[PROCESS] The dataset_23.dat covariance list is correctly defined +[0m[0m[2m[34m[PROCESS] Processing: dataset_23.dat models on Unknown_species genome +[0m[0m[2m[34m[PROCESS] Running Mode: blast searches +[0m[0m[2m[34m[PROCESS] Generating BLAST DB for the target genome +[0m[0m[2m[34m[PROCESS] Running on strategy 8 +[0m[0m[2m[34m[PROCESS] Cleaning miRNA homologs from Unknown species +[0m[0m[2m[34m[PROCESS] Structural evaluation of strategy 8 complete +[0m[0m[2m[34m[PROCESS] Running on strategy 9 +[0m[0m[2m[34m[PROCESS] Cleaning miRNA homologs from Unknown species +[0m[0m[2m[34m[PROCESS] Structural evaluation of strategy 9 complete +[0m[0m[2m[34m[PROCESS] Running on strategy ALL +[0m[0m[2m[34m[PROCESS] Merging candidates on blast +[0m[0m[2m[34m[PROCESS] The dataset_23.dat covariance list is correctly defined +[0m[0m[2m[34m[PROCESS] Processing: dataset_23.dat models on Unknown_species genome +[0m[0m[2m[34m[PROCESS] Running hmm searches mode +[0m[0m[2m[34m[PROCESS] Merging candidates on hmm +[0m[0m[2m[34m[PROCESS] The dataset_23.dat covariance list is correctly defined +[0m[0m[2m[34m[PROCESS] Processing: dataset_23.dat models on Unknown_species genome +[0m[0m[2m[34m[PROCESS] Running rfam searches mode +[0m[0m[2m[34m[PROCESS] Merging candidates on rfam +[0m[0m[2m[34m[PROCESS] The dataset_23.dat covariance list is correctly defined +[0m[0m[2m[34m[PROCESS] Processing: dataset_23.dat models on Unknown_species genome +[0m[0m[2m[34m[PROCESS] Running Mode: mirbase searches +[0m[0m[2m[34m[PROCESS] Merging candidates on mirbase +[0m[0m[2m[34m[PROCESS] The dataset_23.dat covariance list is correctly defined +[0m[0m[2m[34m[PROCESS] Processing: dataset_23.dat models on Unknown_species genome +[0m[0m[2m[34m[PROCESS] Merging candidates on final +[0m[0m[2m[34m[PROCESS] Refining final candidates on Unsp +[0m[0m[1m[32m[RESULT] Detected homology candidates by blast mode +[0m[0m[1m[32m[RESULT] Detected homology candidates by hmm mode +[0m[0m[1m[32m[RESULT] Detected homology candidates by rfam mode +[0m[0m[1m[32m[RESULT] Detected homology candidates by mirbase mode +[0m[0m[2m[34m[PROCESS] Cleaning temporal files... +[0m[0m[1m[97m[END] +-¿Olvida usted algo?- + ¡Ojalá!. + + El emigrante. Luis Felipe Lornelí. (2005) + +[0m[0m \ No newline at end of file