Mercurial > repos > iuc > mmseqs2_easy_linclust_clustering

comparison macro.xml @ 2:b174c3405549 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mmsesq2 commit 611b90f1628037f05d85905c88629a422d0a2053
author iuc
date Mon, 14 Apr 2025 18:39:26 +0000
parents 9f6869226de1
children
comparison
equal deleted inserted replaced
1:e6c5f120f010 2:b174c3405549
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">15.6f452</token> 2 <token name="@TOOL_VERSION@">17-b804f</token>
3 <token name="@VERSION_SUFFIX@">0</token> 3 <token name="@VERSION_SUFFIX@">0</token>
4 <token name="@PROFILE@">22.05</token> 4 <token name="@PROFILE@">22.05</token>
5 <xml name="version_command"> 5 <xml name="version_command">
6 <version_command><![CDATA[mmseqs version]]></version_command> 6 <version_command><![CDATA[mmseqs version]]></version_command>
7 </xml> 7 </xml>
36 <param argument="--mask-prob" type="float" min="0" value="0.9" label="Mask sequences if probablity is above threshold" help=""/> 36 <param argument="--mask-prob" type="float" min="0" value="0.9" label="Mask sequences if probablity is above threshold" help=""/>
37 <param argument="--mask-lower-case" type="select" label="Mask lower case letters" help=""> 37 <param argument="--mask-lower-case" type="select" label="Mask lower case letters" help="">
38 <option value="0" selected="true">Include region</option> 38 <option value="0" selected="true">Include region</option>
39 <option value="1">Exclude region</option> 39 <option value="1">Exclude region</option>
40 </param> 40 </param>
41 <param argument="--mask-n-repeat" type="integer" min="0" value="0" label="Repeat letters that occur > threshold in a row" help=""/>
41 </xml> 42 </xml>
42 <xml name="search_type_aa"> 43 <xml name="search_type_aa">
43 <param argument="--search-type" type="select" label="Search type" help="" > 44 <param argument="--search-type" type="select" label="Search type" help="" >
44 <option value="0" selected="true">Auto</option> 45 <option value="0" selected="true">Auto</option>
45 <option value="1">Amino acid</option> 46 <option value="1">Amino acid</option>