Mercurial > repos > iuc > mothur_filter_seqs
changeset 9:3524ca06478e draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit dfdd4c590370ecb3a9806314d43eb5668e36a01a"
author | iuc |
---|---|
date | Fri, 22 Jan 2021 00:03:40 +0000 |
parents | 89b9efa3c1f0 |
children | |
files | test-data/chimera.count_table_wogroups test-data/chimera.vsearch.accnos test-data/chimera.vsearch.chimeras_wogroups |
diffstat | 3 files changed, 255 insertions(+), 11 deletions(-) [+] |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/chimera.count_table_wogroups Fri Jan 22 00:03:40 2021 +0000 @@ -0,0 +1,122 @@ +Representative_Sequence total +M00967_43_000000000-A3JHG_1_1101_14069_1827 1 +M00967_43_000000000-A3JHG_1_1101_17674_2779 1 +M00967_43_000000000-A3JHG_1_1101_9376_4054 1 +M00967_43_000000000-A3JHG_1_1101_16910_7379 2 +M00967_43_000000000-A3JHG_1_1101_24218_7727 1 +M00967_43_000000000-A3JHG_1_1101_26181_9437 1 +M00967_43_000000000-A3JHG_1_1101_28516_16324 1 +M00967_43_000000000-A3JHG_1_1101_17802_26911 1 +M00967_43_000000000-A3JHG_1_1102_20832_5250 113 +M00967_43_000000000-A3JHG_1_1106_24475_12056 1 +M00967_43_000000000-A3JHG_1_1106_25798_21572 170 +M00967_43_000000000-A3JHG_1_1111_22890_9747 2 +M00967_43_000000000-A3JHG_1_2103_24027_17117 1 +M00967_43_000000000-A3JHG_1_2113_21352_15666 1 +M00967_43_000000000-A3JHG_1_2113_28097_13665 1 +M00967_43_000000000-A3JHG_1_1106_14252_8640 273 +M00967_43_000000000-A3JHG_1_1106_9147_22015 173 +M00967_43_000000000-A3JHG_1_1110_27249_9297 99 +M00967_43_000000000-A3JHG_1_2101_20023_3542 1 +M00967_43_000000000-A3JHG_1_2103_19057_10430 548 +M00967_43_000000000-A3JHG_1_2108_22020_21434 341 +M00967_43_000000000-A3JHG_1_2109_20085_20830 275 +M00967_43_000000000-A3JHG_1_2109_24829_22616 287 +M00967_43_000000000-A3JHG_1_1113_29188_13629 199 +M00967_43_000000000-A3JHG_1_2113_21823_22689 369 +M00967_43_000000000-A3JHG_1_1101_19936_3208 170 +M00967_43_000000000-A3JHG_1_1101_13293_4703 89 +M00967_43_000000000-A3JHG_1_1101_9121_7358 241 +M00967_43_000000000-A3JHG_1_1101_20566_7622 317 +M00967_43_000000000-A3JHG_1_1101_18269_8162 2 +M00967_43_000000000-A3JHG_1_1101_19986_8261 3 +M00967_43_000000000-A3JHG_1_1101_22097_8638 130 +M00967_43_000000000-A3JHG_1_1101_17781_8827 1 +M00967_43_000000000-A3JHG_1_1101_10877_9025 2 +M00967_43_000000000-A3JHG_1_1101_8083_11382 1 +M00967_43_000000000-A3JHG_1_1101_22600_11606 18 +M00967_43_000000000-A3JHG_1_1101_18457_12122 141 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1 +M00967_43_000000000-A3JHG_1_1113_20871_14344 1 +M00967_43_000000000-A3JHG_1_1113_12471_18816 1 +M00967_43_000000000-A3JHG_1_1113_16327_24237 1 +M00967_43_000000000-A3JHG_1_1113_14854_24384 1 +M00967_43_000000000-A3JHG_1_1114_7252_4589 1 +M00967_43_000000000-A3JHG_1_1114_8032_8820 1 +M00967_43_000000000-A3JHG_1_1114_16548_11767 2 +M00967_43_000000000-A3JHG_1_1114_29150_14733 1 +M00967_43_000000000-A3JHG_1_1114_10899_22898 1 +M00967_43_000000000-A3JHG_1_2101_18965_1898 1 +M00967_43_000000000-A3JHG_1_2101_16550_11883 2 +M00967_43_000000000-A3JHG_1_2101_13178_13004 1 +M00967_43_000000000-A3JHG_1_2102_6993_12259 1 +M00967_43_000000000-A3JHG_1_2102_12688_15786 1 +M00967_43_000000000-A3JHG_1_2102_16641_21046 1 +M00967_43_000000000-A3JHG_1_2104_22466_3574 1 +M00967_43_000000000-A3JHG_1_2104_15266_7083 1 +M00967_43_000000000-A3JHG_1_2104_23877_11861 1 +M00967_43_000000000-A3JHG_1_2104_10795_17906 1 +M00967_43_000000000-A3JHG_1_2104_14517_21920 1 +M00967_43_000000000-A3JHG_1_2105_10923_10313 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2
--- a/test-data/chimera.vsearch.accnos Tue Dec 08 12:52:20 2020 +0000 +++ b/test-data/chimera.vsearch.accnos Fri Jan 22 00:03:40 2021 +0000 @@ -1,26 +1,31 @@ +M00967_43_000000000-A3JHG_1_1101_19986_8261 +M00967_43_000000000-A3JHG_1_1110_15840_20779 +M00967_43_000000000-A3JHG_1_2105_10923_10313 M00967_43_000000000-A3JHG_1_1101_18269_8162 -M00967_43_000000000-A3JHG_1_1101_19986_8261 +M00967_43_000000000-A3JHG_1_1104_11653_4504 +M00967_43_000000000-A3JHG_1_1107_11945_14699 +M00967_43_000000000-A3JHG_1_1107_22653_9906 +M00967_43_000000000-A3JHG_1_1107_8955_12308 +M00967_43_000000000-A3JHG_1_1114_16548_11767 +M00967_43_000000000-A3JHG_1_2101_16550_11883 +M00967_43_000000000-A3JHG_1_2107_20590_19864 +M00967_43_000000000-A3JHG_1_2114_20166_26072 M00967_43_000000000-A3JHG_1_1101_20136_15321 M00967_43_000000000-A3JHG_1_1101_2601_14288 M00967_43_000000000-A3JHG_1_1101_8083_11382 M00967_43_000000000-A3JHG_1_1102_11996_19459 M00967_43_000000000-A3JHG_1_1102_28309_11693 M00967_43_000000000-A3JHG_1_1103_18439_9570 -M00967_43_000000000-A3JHG_1_1104_11653_4504 M00967_43_000000000-A3JHG_1_1104_23658_26022 M00967_43_000000000-A3JHG_1_1105_15970_15381 M00967_43_000000000-A3JHG_1_1105_16780_22313 M00967_43_000000000-A3JHG_1_1105_6783_9901 M00967_43_000000000-A3JHG_1_1106_8935_10829 -M00967_43_000000000-A3JHG_1_1107_11945_14699 M00967_43_000000000-A3JHG_1_1107_21101_17742 -M00967_43_000000000-A3JHG_1_1107_22653_9906 M00967_43_000000000-A3JHG_1_1107_8466_14296 -M00967_43_000000000-A3JHG_1_1107_8955_12308 M00967_43_000000000-A3JHG_1_1108_13143_12552 M00967_43_000000000-A3JHG_1_1108_23614_18589 M00967_43_000000000-A3JHG_1_1109_4809_15779 -M00967_43_000000000-A3JHG_1_1110_15840_20779 M00967_43_000000000-A3JHG_1_1110_23880_14461 M00967_43_000000000-A3JHG_1_1110_24675_19216 M00967_43_000000000-A3JHG_1_1111_19100_13750 @@ -31,22 +36,18 @@ M00967_43_000000000-A3JHG_1_1113_12471_18816 M00967_43_000000000-A3JHG_1_1113_14854_24384 M00967_43_000000000-A3JHG_1_1113_20871_14344 -M00967_43_000000000-A3JHG_1_1114_16548_11767 M00967_43_000000000-A3JHG_1_1114_7252_4589 M00967_43_000000000-A3JHG_1_1114_8032_8820 M00967_43_000000000-A3JHG_1_2101_13178_13004 -M00967_43_000000000-A3JHG_1_2101_16550_11883 M00967_43_000000000-A3JHG_1_2101_18965_1898 M00967_43_000000000-A3JHG_1_2102_12688_15786 M00967_43_000000000-A3JHG_1_2102_6993_12259 M00967_43_000000000-A3JHG_1_2104_15266_7083 M00967_43_000000000-A3JHG_1_2104_22466_3574 M00967_43_000000000-A3JHG_1_2104_23877_11861 -M00967_43_000000000-A3JHG_1_2105_10923_10313 M00967_43_000000000-A3JHG_1_2105_21664_11149 M00967_43_000000000-A3JHG_1_2106_12463_10694 M00967_43_000000000-A3JHG_1_2106_7204_11261 -M00967_43_000000000-A3JHG_1_2107_20590_19864 M00967_43_000000000-A3JHG_1_2107_9082_21015 M00967_43_000000000-A3JHG_1_2108_17630_23878 M00967_43_000000000-A3JHG_1_2108_5348_13505 @@ -58,6 +59,5 @@ M00967_43_000000000-A3JHG_1_2112_19406_24178 M00967_43_000000000-A3JHG_1_2113_11985_5871 M00967_43_000000000-A3JHG_1_2113_28097_13665 -M00967_43_000000000-A3JHG_1_2114_20166_26072 M00967_43_000000000-A3JHG_1_2114_22955_20188 M00967_43_000000000-A3JHG_1_2114_23175_9025
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/chimera.vsearch.chimeras_wogroups Fri Jan 22 00:03:40 2021 +0000 @@ -0,0 +1,122 @@ +Score Query ParentA ParentB IdQM IdQA IdQB IdAB IdQT LY LN LA RY RN RA Div YN +0.0000 M00967_43_000000000-A3JHG_1_2103_19057_10430;size=548; * * * * * * * * 0 0 0 0 0 0 * N +0.0000 M00967_43_000000000-A3JHG_1_2113_21823_22689;size=369; * * * * * * * * 0 0 0 0 0 0 * N +0.0000 M00967_43_000000000-A3JHG_1_2108_22020_21434;size=341; * * * * * * * * 0 0 0 0 0 0 * N +0.0000 M00967_43_000000000-A3JHG_1_1101_20566_7622;size=317; * * * * * * * * 0 0 0 0 0 0 * N +0.0000 M00967_43_000000000-A3JHG_1_2109_24829_22616;size=287; * * * * * * * * 0 0 0 0 0 0 * N +0.0000 M00967_43_000000000-A3JHG_1_2109_20085_20830;size=275; * * * * * * * * 0 0 0 0 0 0 * N +0.0000 M00967_43_000000000-A3JHG_1_1106_14252_8640;size=273; * * * * * * * * 0 0 0 0 0 0 * N +0.0000 M00967_43_000000000-A3JHG_1_1101_9121_7358;size=241; * * * * * * * * 0 0 0 0 0 0 * N +0.0000 M00967_43_000000000-A3JHG_1_1113_29188_13629;size=199; * * * * * * * * 0 0 0 0 0 0 * N +0.0156 M00967_43_000000000-A3JHG_1_1106_9147_22015;size=173; M00967_43_000000000-A3JHG_1_2103_19057_10430;size=548; M00967_43_000000000-A3JHG_1_2108_22020_21434;size=341; M00967_43_000000000-A3JHG_1_2108_22020_21434;size=341; 87.2 86.0 86.8 96.0 86.8 4 3 28 3 0 1 0.4 N +0.0000 M00967_43_000000000-A3JHG_1_1101_19936_3208;size=170; * * * * * * * * 0 0 0 0 0 0 * N +0.0000 M00967_43_000000000-A3JHG_1_1106_25798_21572;size=170; * * * * * * * * 0 0 0 0 0 0 * N +0.0236 M00967_43_000000000-A3JHG_1_1101_18457_12122;size=141; M00967_43_000000000-A3JHG_1_2103_19057_10430;size=548; M00967_43_000000000-A3JHG_1_2108_22020_21434;size=341; M00967_43_000000000-A3JHG_1_2108_22020_21434;size=341; 94.5 92.9 93.7 96.0 93.7 3 1 6 5 1 6 0.8 N +0.0482 M00967_43_000000000-A3JHG_1_1101_22097_8638;size=130; M00967_43_000000000-A3JHG_1_2113_21823_22689;size=369; M00967_43_000000000-A3JHG_1_2108_22020_21434;size=341; M00967_43_000000000-A3JHG_1_2113_21823_22689;size=369; 86.2 83.4 80.2 77.1 83.4 26 11 12 12 5 7 2.8 N +0.0259 M00967_43_000000000-A3JHG_1_1102_20832_5250;size=113; M00967_43_000000000-A3JHG_1_2108_22020_21434;size=341; M00967_43_000000000-A3JHG_1_2113_21823_22689;size=369; M00967_43_000000000-A3JHG_1_2108_22020_21434;size=341; 86.6 86.2 77.1 77.1 86.2 36 12 18 2 1 3 0.4 N +0.0160 M00967_43_000000000-A3JHG_1_1110_27249_9297;size=99; M00967_43_000000000-A3JHG_1_2103_19057_10430;size=548; M00967_43_000000000-A3JHG_1_2108_22020_21434;size=341; M00967_43_000000000-A3JHG_1_2103_19057_10430;size=548; 78.3 77.1 76.7 96.0 77.1 5 1 52 3 0 2 1.2 N +0.0000 M00967_43_000000000-A3JHG_1_1101_13293_4703;size=89; * * * * * * * * 0 0 0 0 0 0 * N +0.0583 M00967_43_000000000-A3JHG_1_1101_22252_18361;size=45; M00967_43_000000000-A3JHG_1_1106_25798_21572;size=170; M00967_43_000000000-A3JHG_1_1101_19936_3208;size=170; M00967_43_000000000-A3JHG_1_1106_25798_21572;size=170; 84.2 82.2 78.7 81.4 82.2 16 2 10 11 6 22 2.0 N +0.0000 M00967_43_000000000-A3JHG_1_1101_22600_11606;size=18; * * * * * * * * 0 0 0 0 0 0 * N +0.9327 M00967_43_000000000-A3JHG_1_1101_19986_8261;size=3; 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