Mercurial > repos > iuc > multiqc
annotate test-data/fastp1.json.txt @ 14:b2f1f75d49c4 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit fb0d9f3e89dc31e481f4bdb3e498a713f9e60def
author | iuc |
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date | Sat, 13 Apr 2019 08:30:21 -0400 |
parents | 1c2db0054039 |
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rev | line source |
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1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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1 { |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
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2 "summary": { |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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3 "before_filtering": { |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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4 "total_reads":2, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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5 "total_bases":302, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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6 "q20_bases":262, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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7 "q30_bases":241, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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8 "q20_rate":0.86755, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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9 "q30_rate":0.798013, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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10 "read1_mean_length":151, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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11 "gc_content":0.36755 |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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12 }, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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13 "after_filtering": { |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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14 "total_reads":2, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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15 "total_bases":286, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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16 "q20_bases":246, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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17 "q30_bases":226, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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18 "q20_rate":0.86014, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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19 "q30_rate":0.79021, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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20 "read1_mean_length":143, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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21 "gc_content":0.367133 |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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22 } |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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23 }, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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24 "filtering_result": { |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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25 "passed_filter_reads": 2, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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changeset
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26 "low_quality_reads": 0, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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changeset
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27 "too_many_N_reads": 0, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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28 "too_short_reads": 0, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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changeset
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29 "too_long_reads": 0 |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
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30 }, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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31 "duplication": { |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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32 "rate": 0, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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33 "histogram": [2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0], |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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34 "mean_gc": [0.407843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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35 }, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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36 "read1_before_filtering": { |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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37 "total_reads": 2, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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38 "total_bases": 302, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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39 "q20_bases": 262, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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40 "q30_bases": 241, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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41 "total_cycles": 151, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
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42 "quality_curves": { |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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changeset
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43 "A":[26.5,32,32,32,32,36,36,36,36,36,21,25,36,23,34,32,25,36,14,34,36,26.5,21,36,36,14,14,36,36,36,21,28.5,36,34,36,36,36,36,36,36,36,25,36,25,25,36,25,34,36,36,36,36,36,25,32,25,34,36,36,25,36,36,32,36,36,36,36,34,36,36,36,36,36,28.5,36,36,36,36,32,14,36,25,34,25,28.5,36,25,28.5,14,36,28.5,36,36,36,36,36,21,36,25,36,34,34,34,25,36,32,25,36,36,36,36,36,36,25,31.5,36,36,36,34,36,36,25,34,25,36,36,27,32,36,36,36,34,36,36,36,23,36,32,31.5,36,36,20.5,34,34,36,36,14,36,36,36,25], |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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44 "T":[26.5,32,32,32,32,34,36,36,36,36,28.5,25,36,32,36,32,25,36,25,34,36,26.5,28.5,36,36,25,36,34,36,36,28.5,28.5,25,34,34,36,25,25,36,36,36,25,36,36,36,36,25,36,34,25,36,36,36,25,36,25,32,36,36,25,36,36,32,25,25,36,36,32,36,36,36,36,36,28.5,36,36,32,32,34,25,36,25,34,25,28.5,36,25,28.5,14,25,36,27,36,34,34,36,28.5,36,36,31.5,32,36,36,25,36,32,25,36,36,36,36,36,36,36,31.5,27,36,36,34,36,25,25,34,25,36,36,29.5,29.5,36,25,34,34,36,14,27,23,34,36,31.5,14,36,20.5,34,34,32,36,23,34,27,36,25], |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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45 "C":[26.5,32,32,32,32,34,36,36,36,36,28.5,36,36,23,32,32,25,36,25,34,36,26.5,28.5,36,36,25,25,34,36,36,28.5,28.5,14,32,32,36,14,14,36,36,36,14,36,25,25,36,25,32,32,14,36,36,36,25,34,25,34,36,36,25,36,36,32,25,25,36,36,34,36,36,36,36,36,28.5,36,36,34,34,34,36,36,14,32,14,28.5,36,25,21,14,25,21,31.5,36,32,32,36,28.5,36,14,27,34,34,34,25,36,32,25,36,36,36,36,36,36,14,31.5,31.5,36,36,34,36,25,25,34,25,36,36,32,27,36,25,32,34,36,25,31.5,23,32,34,31.5,25,36,20.5,34,34,34,36,23,34,31.5,36,25], |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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46 "G":[26.5,32,32,32,32,32,36,36,36,36,36,14,36,14,34,32,25,36,36,34,36,26.5,36,36,36,36,25,32,36,36,36,28.5,25,36,34,36,25,25,36,36,36,36,36,14,14,36,25,34,34,25,36,36,36,25,34,25,36,36,36,25,36,36,32,14,14,36,36,36,36,36,36,36,36,28.5,36,36,34,34,36,25,36,36,36,36,28.5,36,25,36,14,14,28.5,31.5,36,34,34,36,36,36,25,31.5,36,32,32,25,36,32,25,36,36,36,36,36,36,25,31.5,31.5,36,36,34,36,14,25,34,25,36,36,29.5,29.5,36,14,34,34,36,25,31.5,23,34,34,31.5,25,36,20.5,34,34,34,36,32,32,31.5,36,25], |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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47 "mean":[26.5,32,32,32,32,34,36,36,36,36,28.5,25,36,23,34,32,25,36,25,34,36,26.5,28.5,36,36,25,25,34,36,36,28.5,28.5,25,34,34,36,25,25,36,36,36,25,36,25,25,36,25,34,34,25,36,36,36,25,34,25,34,36,36,25,36,36,32,25,25,36,36,34,36,36,36,36,36,28.5,36,36,34,34,34,25,36,25,34,25,28.5,36,25,28.5,14,25,28.5,31.5,36,34,34,36,28.5,36,25,31.5,34,34,34,25,36,32,25,36,36,36,36,36,36,25,31.5,31.5,36,36,34,36,25,25,34,25,36,36,29.5,29.5,36,25,34,34,36,25,31.5,23,34,34,31.5,25,36,20.5,34,34,34,36,23,34,31.5,36,25] |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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48 }, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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49 "content_curves": { |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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50 "A":[0,1,0,0.5,1,0.5,0.5,0,0,0,0.5,0,1,0,0,0.5,0,0,0.5,1,0.5,1,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,0.5,0.5,0.5,0,0,0,0,0,0,0,1,0,0.5,0.5,1,0.5,0.5,0,0.5,0,0,0.5,0.5,1,0.5,0,0.5,0.5,0.5,0,0.5,0,0,0,1,1,1,0,0.5,0,0.5,0.5,0.5,0.5,0.5,0,0,0,1,0.5,0,0,0.5,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,0,0,0.5,0,0,0,1,0,1,0,0,0.5,0,0.5,1,0,0,1,0.5,0.5,0.5,1,1,0.5,0,0,0,0.5,1,0.5,0.5,0,0.5,0.5,1,1,0.5,0.5,0,0.5,0.5,0,0.5,0.5,1,0,1,0.5,0.5,0.5,0.5,0.5,0.5,0], |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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51 "T":[1,0,0,0,0,0,0,0.5,0.5,0.5,0,0,0,0.5,0.5,0,0,0.5,0,0,0.5,0,0,0.5,0,0,0.5,0,0.5,0,0,0,0,0,0,0,0,0,0.5,1,0,0,0.5,0.5,0.5,1,0,0.5,0,0,0,0,0,0,0.5,1,0.5,0.5,0,0,0,0,0,0,0,1,0,0.5,0.5,0,0,0,0,1,0.5,1,0.5,0.5,0,0,0.5,0,0,0,0,0,0,0,0.5,0,0.5,0.5,0.5,0,0,0.5,0,0,0.5,0,0.5,0.5,0.5,0,0,0,1,0.5,0.5,0,0,0,0,0.5,0,0.5,0,0,0,0,0,1,0,0,0.5,0,0,0,1,0,0,0,0,0.5,0.5,1,0,0.5,1,0.5,0.5,0,0,0,0.5,0.5,0,0,0.5,0.5,1], |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
diff
changeset
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52 "C":[0,0,0.5,0,0,0,0,0.5,0,0.5,0,0.5,0,0,0.5,0,1,0.5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5,0.5,0.5,0,0.5,0.5,0,0,1,0.5,0.5,0,0,0,0,0.5,0.5,0.5,0,0,0.5,1,0,0,0,0,0.5,0,0,0,0,0,0,0,0.5,0,0,0.5,0,0,0,0,0,0,0,0,0,0.5,0,0.5,0.5,0.5,0,0,0,0.5,0,0,0.5,0,0,0.5,0.5,0,0,0.5,0.5,0.5,0,0,0,0,1,0,0,0.5,0,0.5,0,0,0,0.5,0,0,0.5,0.5,0,0,0,0,0,0,0,0,0.5,0.5,0,0,0.5,0,0,0,0,0,0.5,0,0,0,0,0,1,0,0,0,0,0,0,0,0], |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
iuc
parents:
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53 "G":[0,0,0.5,0.5,0,0.5,0.5,0,0.5,0,0.5,0.5,0,0.5,0,0.5,0,0,0.5,0,0,0,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,1,0,0.5,0,0.5,0,0,0,0,0,0.5,0,0.5,0.5,0,0,0,0,0,0,0.5,0,0,0,0,0.5,0,0,0,0.5,1,0.5,0.5,0.5,0,0,0.5,0.5,0.5,0,0,0,0,0,0,0,0,0.5,0,0,0.5,0.5,0.5,0,0.5,1,0.5,0,0.5,0,0,0,0,0,0,0.5,0.5,0,0,0.5,0.5,0.5,0,0,0,0,0,0,0.5,0.5,0,1,0,0,0,0,0,0,0,0.5,0,1,1,0,0,0,0,0,0.5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5,0.5,0,0,0], |
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54 "N":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0], |
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55 "GC":[0,0,1,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,1,0,0.5,0.5,0.5,1,0.5,0.5,0,0,0,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,1,0.5,1,0.5,0.5,0.5,0.5,0,0,1,1,0.5,0.5,0.5,0,0,0.5,0.5,0.5,0,0.5,0.5,1,0,0,0.5,0,0.5,0,0.5,1,0.5,0.5,0.5,0,0.5,0.5,0.5,1,0,0,0,0,0,0,0,0,0.5,0.5,0,1,1,1,0,0.5,1,1,0,0.5,0.5,0,0,0.5,0.5,0,0.5,1,0.5,0.5,0.5,0.5,0.5,0,1,0,0,0.5,0,1,0.5,0,1,0.5,0,0,0.5,0.5,0,0,0.5,0,1,1,0,0,0.5,0.5,0,0.5,0.5,0,0,0,0,0,0.5,0,0,0,0,0,1,0,0,0,0.5,0.5,0,0,0] |
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56 }, |
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57 "kmer_count": { |
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58 "AAAAA":2, "AAAAT":3, "AAAAC":2, "AAAAG":1, "AAATA":3, "AAATT":2, "AAATC":1, "AAATG":2, "AAACA":2, "AAACT":1, "AAACC":2, "AAACG":0, "AAAGA":0, "AAAGT":2, "AAAGC":0, "AAAGG":4, |
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59 "AATAA":3, "AATAT":4, "AATAC":0, "AATAG":0, "AATTA":0, "AATTT":2, "AATTC":0, "AATTG":0, "AATCA":0, "AATCT":0, "AATCC":0, "AATCG":1, "AATGA":0, "AATGT":0, "AATGC":1, "AATGG":1, |
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60 "AACAA":2, "AACAT":0, "AACAC":0, "AACAG":0, "AACTA":0, "AACTT":0, "AACTC":1, "AACTG":0, "AACCA":0, "AACCT":2, "AACCC":1, "AACCG":0, "AACGA":0, "AACGT":0, "AACGC":0, "AACGG":0, |
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61 "AAGAA":0, "AAGAT":0, "AAGAC":0, "AAGAG":0, "AAGTA":1, "AAGTT":0, "AAGTC":0, "AAGTG":2, "AAGCA":0, "AAGCT":1, "AAGCC":0, "AAGCG":0, "AAGGA":3, "AAGGT":1, "AAGGC":0, "AAGGG":1, |
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62 "ATAAA":4, "ATAAT":1, "ATAAC":0, "ATAAG":1, "ATATA":1, "ATATT":2, "ATATC":0, "ATATG":0, "ATACA":0, "ATACT":0, "ATACC":0, "ATACG":0, "ATAGA":0, "ATAGT":0, "ATAGC":0, "ATAGG":0, |
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63 "ATTAA":2, "ATTAT":0, "ATTAC":0, "ATTAG":0, "ATTTA":1, "ATTTT":1, "ATTTC":2, "ATTTG":1, "ATTCA":1, "ATTCT":0, "ATTCC":0, "ATTCG":0, "ATTGA":0, "ATTGT":0, "ATTGC":0, "ATTGG":0, |
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64 "ATCAA":1, "ATCAT":0, "ATCAC":1, "ATCAG":0, "ATCTA":0, "ATCTT":0, "ATCTC":0, "ATCTG":0, "ATCCA":0, "ATCCT":0, "ATCCC":0, "ATCCG":0, "ATCGA":0, "ATCGT":0, "ATCGC":2, "ATCGG":0, |
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65 "ATGAA":0, "ATGAT":0, "ATGAC":0, "ATGAG":0, "ATGTA":0, "ATGTT":0, "ATGTC":0, "ATGTG":0, "ATGCA":1, "ATGCT":0, "ATGCC":0, "ATGCG":0, "ATGGA":1, "ATGGT":0, "ATGGC":0, "ATGGG":0, |
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66 "ACAAA":3, "ACAAT":0, "ACAAC":0, "ACAAG":1, "ACATA":0, "ACATT":3, "ACATC":2, "ACATG":0, "ACACA":0, "ACACT":0, "ACACC":0, "ACACG":0, "ACAGA":0, "ACAGT":0, "ACAGC":0, "ACAGG":0, |
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67 "ACTAA":0, "ACTAT":0, "ACTAC":0, "ACTAG":0, "ACTTA":0, "ACTTT":0, "ACTTC":0, "ACTTG":0, "ACTCA":0, "ACTCT":1, "ACTCC":0, "ACTCG":0, "ACTGA":0, "ACTGT":0, "ACTGC":0, "ACTGG":0, |
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68 "ACCAA":1, "ACCAT":0, "ACCAC":0, "ACCAG":0, "ACCTA":0, "ACCTT":2, "ACCTC":0, "ACCTG":1, "ACCCA":2, "ACCCT":0, "ACCCC":0, "ACCCG":0, "ACCGA":0, "ACCGT":0, "ACCGC":0, "ACCGG":0, |
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69 "ACGAA":0, "ACGAT":0, "ACGAC":0, "ACGAG":0, "ACGTA":0, "ACGTT":0, "ACGTC":0, "ACGTG":0, "ACGCA":0, "ACGCT":0, "ACGCC":0, "ACGCG":0, "ACGGA":0, "ACGGT":0, "ACGGC":0, "ACGGG":0, |
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70 "AGAAA":1, "AGAAT":0, "AGAAC":0, "AGAAG":0, "AGATA":0, "AGATT":0, "AGATC":0, "AGATG":0, "AGACA":1, "AGACT":0, "AGACC":0, "AGACG":0, "AGAGA":1, "AGAGT":0, "AGAGC":0, "AGAGG":0, |
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71 "AGTAA":1, "AGTAT":0, "AGTAC":1, "AGTAG":0, "AGTTA":0, "AGTTT":0, "AGTTC":0, "AGTTG":0, "AGTCA":0, "AGTCT":0, "AGTCC":0, "AGTCG":0, "AGTGA":2, "AGTGT":0, "AGTGC":0, "AGTGG":1, |
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72 "AGCAA":0, "AGCAT":1, "AGCAC":0, "AGCAG":0, "AGCTA":0, "AGCTT":1, "AGCTC":0, "AGCTG":1, "AGCCA":0, "AGCCT":0, "AGCCC":1, "AGCCG":0, "AGCGA":0, "AGCGT":0, "AGCGC":0, "AGCGG":0, |
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73 "AGGAA":1, "AGGAT":1, "AGGAC":0, "AGGAG":3, "AGGTA":1, "AGGTT":0, "AGGTC":1, "AGGTG":0, "AGGCA":1, "AGGCT":1, "AGGCC":0, "AGGCG":0, "AGGGA":0, "AGGGT":0, "AGGGC":0, "AGGGG":1, |
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74 "TAAAA":3, "TAAAT":1, "TAAAC":3, "TAAAG":2, "TAATA":2, "TAATT":0, "TAATC":0, "TAATG":0, "TAACA":0, "TAACT":0, "TAACC":0, "TAACG":0, "TAAGA":0, "TAAGT":0, "TAAGC":1, "TAAGG":0, |
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75 "TATAA":3, "TATAT":0, "TATAC":0, "TATAG":0, "TATTA":1, "TATTT":0, "TATTC":1, "TATTG":0, "TATCA":0, "TATCT":0, "TATCC":0, "TATCG":0, "TATGA":0, "TATGT":0, "TATGC":0, "TATGG":0, |
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76 "TACAA":1, "TACAT":2, "TACAC":0, "TACAG":0, "TACTA":0, "TACTT":0, "TACTC":0, "TACTG":0, "TACCA":1, "TACCT":0, "TACCC":1, "TACCG":0, "TACGA":0, "TACGT":0, "TACGC":0, "TACGG":0, |
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77 "TAGAA":0, "TAGAT":0, "TAGAC":0, "TAGAG":0, "TAGTA":0, "TAGTT":0, "TAGTC":0, "TAGTG":0, "TAGCA":0, "TAGCT":0, "TAGCC":0, "TAGCG":0, "TAGGA":1, "TAGGT":0, "TAGGC":0, "TAGGG":0, |
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78 "TTAAA":2, "TTAAT":1, "TTAAC":0, "TTAAG":0, "TTATA":1, "TTATT":0, "TTATC":0, "TTATG":0, "TTACA":1, "TTACT":0, "TTACC":0, "TTACG":0, "TTAGA":0, "TTAGT":0, "TTAGC":0, "TTAGG":0, |
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79 "TTTAA":1, "TTTAT":1, "TTTAC":1, "TTTAG":0, "TTTTA":1, "TTTTT":1, "TTTTC":0, "TTTTG":0, "TTTCA":2, "TTTCT":0, "TTTCC":0, "TTTCG":0, "TTTGA":0, "TTTGT":0, "TTTGC":0, "TTTGG":1, |
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80 "TTCAA":1, "TTCAT":1, "TTCAC":0, "TTCAG":1, "TTCTA":0, "TTCTT":0, "TTCTC":0, "TTCTG":0, "TTCCA":0, "TTCCT":2, "TTCCC":0, "TTCCG":0, "TTCGA":0, "TTCGT":0, "TTCGC":0, "TTCGG":0, |
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81 "TTGAA":1, "TTGAT":0, "TTGAC":0, "TTGAG":0, "TTGTA":0, "TTGTT":0, "TTGTC":0, "TTGTG":0, "TTGCA":0, "TTGCT":0, "TTGCC":0, "TTGCG":0, "TTGGA":2, "TTGGT":0, "TTGGC":0, "TTGGG":0, |
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82 "TCAAA":2, "TCAAT":0, "TCAAC":0, "TCAAG":0, "TCATA":0, "TCATT":1, "TCATC":0, "TCATG":0, "TCACA":1, "TCACT":0, "TCACC":0, "TCACG":0, "TCAGA":0, "TCAGT":0, "TCAGC":0, "TCAGG":1, |
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83 "TCTAA":0, "TCTAT":0, "TCTAC":0, "TCTAG":0, "TCTTA":0, "TCTTT":0, "TCTTC":0, "TCTTG":0, "TCTCA":0, "TCTCT":0, "TCTCC":0, "TCTCG":0, "TCTGA":0, "TCTGT":1, "TCTGC":0, "TCTGG":0, |
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84 "TCCAA":0, "TCCAT":0, "TCCAC":0, "TCCAG":0, "TCCTA":0, "TCCTT":0, "TCCTC":0, "TCCTG":2, "TCCCA":0, "TCCCT":0, "TCCCC":0, "TCCCG":0, "TCCGA":0, "TCCGT":0, "TCCGC":0, "TCCGG":0, |
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85 "TCGAA":0, "TCGAT":0, "TCGAC":0, "TCGAG":0, "TCGTA":0, "TCGTT":0, "TCGTC":0, "TCGTG":0, "TCGCA":0, "TCGCT":2, "TCGCC":0, "TCGCG":0, "TCGGA":0, "TCGGT":0, "TCGGC":0, "TCGGG":1, |
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86 "TGAAA":2, "TGAAT":0, "TGAAC":0, "TGAAG":0, "TGATA":0, "TGATT":0, "TGATC":0, "TGATG":0, "TGACA":1, "TGACT":0, "TGACC":0, "TGACG":0, "TGAGA":0, "TGAGT":0, "TGAGC":1, "TGAGG":0, |
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87 "TGTAA":0, "TGTAT":0, "TGTAC":1, "TGTAG":0, "TGTTA":0, "TGTTT":0, "TGTTC":0, "TGTTG":0, "TGTCA":0, "TGTCT":0, "TGTCC":0, "TGTCG":0, "TGTGA":0, "TGTGT":0, "TGTGC":0, "TGTGG":0, |
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88 "TGCAA":1, "TGCAT":0, "TGCAC":1, "TGCAG":0, "TGCTA":0, "TGCTT":0, "TGCTC":0, "TGCTG":0, "TGCCA":0, "TGCCT":0, "TGCCC":0, "TGCCG":0, "TGCGA":0, "TGCGT":0, "TGCGC":0, "TGCGG":0, |
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89 "TGGAA":1, "TGGAT":0, "TGGAC":0, "TGGAG":2, "TGGTA":2, "TGGTT":0, "TGGTC":0, "TGGTG":0, "TGGCA":1, "TGGCT":0, "TGGCC":0, "TGGCG":0, "TGGGA":1, "TGGGT":0, "TGGGC":0, "TGGGG":0, |
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90 "CAAAA":2, "CAAAT":2, "CAAAC":0, "CAAAG":2, "CAATA":1, "CAATT":0, "CAATC":0, "CAATG":0, "CAACA":0, "CAACT":0, "CAACC":0, "CAACG":0, "CAAGA":0, "CAAGT":1, "CAAGC":0, "CAAGG":0, |
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91 "CATAA":0, "CATAT":0, "CATAC":0, "CATAG":0, "CATTA":1, "CATTT":3, "CATTC":0, "CATTG":0, "CATCA":2, "CATCT":0, "CATCC":0, "CATCG":1, "CATGA":0, "CATGT":0, "CATGC":0, "CATGG":0, |
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92 "CACAA":1, "CACAT":1, "CACAC":0, "CACAG":0, "CACTA":0, "CACTT":0, "CACTC":0, "CACTG":0, "CACCA":0, "CACCT":1, "CACCC":0, "CACCG":0, "CACGA":0, "CACGT":0, "CACGC":0, "CACGG":0, |
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93 "CAGAA":0, "CAGAT":0, "CAGAC":1, "CAGAG":0, "CAGTA":0, "CAGTT":0, "CAGTC":0, "CAGTG":1, "CAGCA":0, "CAGCT":1, "CAGCC":0, "CAGCG":0, "CAGGA":1, "CAGGT":0, "CAGGC":1, "CAGGG":0, |
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94 "CTAAA":0, "CTAAT":0, "CTAAC":0, "CTAAG":0, "CTATA":0, "CTATT":0, "CTATC":0, "CTATG":0, "CTACA":0, "CTACT":0, "CTACC":0, "CTACG":0, "CTAGA":0, "CTAGT":0, "CTAGC":0, "CTAGG":0, |
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95 "CTTAA":0, "CTTAT":0, "CTTAC":0, "CTTAG":0, "CTTTA":1, "CTTTT":0, "CTTTC":0, "CTTTG":0, "CTTCA":0, "CTTCT":0, "CTTCC":2, "CTTCG":0, "CTTGA":1, "CTTGT":0, "CTTGC":0, "CTTGG":1, |
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96 "CTCAA":0, "CTCAT":0, "CTCAC":0, "CTCAG":0, "CTCTA":0, "CTCTT":0, "CTCTC":0, "CTCTG":1, "CTCCA":0, "CTCCT":0, "CTCCC":0, "CTCCG":0, "CTCGA":0, "CTCGT":0, "CTCGC":0, "CTCGG":0, |
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97 "CTGAA":1, "CTGAT":0, "CTGAC":0, "CTGAG":0, "CTGTA":1, "CTGTT":0, "CTGTC":0, "CTGTG":0, "CTGCA":1, "CTGCT":0, "CTGCC":0, "CTGCG":0, "CTGGA":0, "CTGGT":1, "CTGGC":1, "CTGGG":1, |
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98 "CCAAA":0, "CCAAT":1, "CCAAC":0, "CCAAG":0, "CCATA":0, "CCATT":0, "CCATC":0, "CCATG":0, "CCACA":0, "CCACT":0, "CCACC":1, "CCACG":0, "CCAGA":1, "CCAGT":0, "CCAGC":0, "CCAGG":1, |
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99 "CCTAA":0, "CCTAT":0, "CCTAC":0, "CCTAG":0, "CCTTA":0, "CCTTT":0, "CCTTC":1, "CCTTG":1, "CCTCA":0, "CCTCT":0, "CCTCC":0, "CCTCG":0, "CCTGA":0, "CCTGT":0, "CCTGC":1, "CCTGG":2, |
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100 "CCCAA":0, "CCCAT":0, "CCCAC":1, "CCCAG":2, "CCCTA":0, "CCCTT":0, "CCCTC":0, "CCCTG":0, "CCCCA":0, "CCCCT":0, "CCCCC":0, "CCCCG":0, "CCCGA":0, "CCCGT":0, "CCCGC":0, "CCCGG":0, |
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101 "CCGAA":0, "CCGAT":0, "CCGAC":0, "CCGAG":0, "CCGTA":0, "CCGTT":0, "CCGTC":0, "CCGTG":0, "CCGCA":0, "CCGCT":0, "CCGCC":0, "CCGCG":0, "CCGGA":0, "CCGGT":0, "CCGGC":0, "CCGGG":0, |
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102 "CGAAA":0, "CGAAT":0, "CGAAC":0, "CGAAG":0, "CGATA":0, "CGATT":0, "CGATC":0, "CGATG":0, "CGACA":0, "CGACT":0, "CGACC":0, "CGACG":0, "CGAGA":0, "CGAGT":0, "CGAGC":0, "CGAGG":0, |
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103 "CGTAA":0, "CGTAT":0, "CGTAC":0, "CGTAG":0, "CGTTA":0, "CGTTT":0, "CGTTC":0, "CGTTG":0, "CGTCA":0, "CGTCT":0, "CGTCC":0, "CGTCG":0, "CGTGA":0, "CGTGT":0, "CGTGC":0, "CGTGG":0, |
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104 "CGCAA":0, "CGCAT":0, "CGCAC":0, "CGCAG":0, "CGCTA":0, "CGCTT":1, "CGCTC":0, "CGCTG":1, "CGCCA":0, "CGCCT":0, "CGCCC":0, "CGCCG":0, "CGCGA":0, "CGCGT":0, "CGCGC":0, "CGCGG":0, |
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105 "CGGAA":0, "CGGAT":0, "CGGAC":0, "CGGAG":0, "CGGTA":0, "CGGTT":0, "CGGTC":0, "CGGTG":0, "CGGCA":0, "CGGCT":0, "CGGCC":0, "CGGCG":0, "CGGGA":1, "CGGGT":0, "CGGGC":0, "CGGGG":0, |
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106 "GAAAA":1, "GAAAT":2, "GAAAC":0, "GAAAG":1, "GAATA":1, "GAATT":0, "GAATC":0, "GAATG":0, "GAACA":0, "GAACT":0, "GAACC":1, "GAACG":0, "GAAGA":0, "GAAGT":0, "GAAGC":0, "GAAGG":1, |
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107 "GATAA":0, "GATAT":0, "GATAC":0, "GATAG":0, "GATTA":0, "GATTT":0, "GATTC":0, "GATTG":0, "GATCA":0, "GATCT":0, "GATCC":0, "GATCG":0, "GATGA":0, "GATGT":0, "GATGC":0, "GATGG":0, |
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108 "GACAA":0, "GACAT":2, "GACAC":0, "GACAG":0, "GACTA":0, "GACTT":0, "GACTC":0, "GACTG":0, "GACCA":0, "GACCT":0, "GACCC":0, "GACCG":0, "GACGA":0, "GACGT":0, "GACGC":0, "GACGG":0, |
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109 "GAGAA":1, "GAGAT":0, "GAGAC":0, "GAGAG":1, "GAGTA":1, "GAGTT":0, "GAGTC":0, "GAGTG":0, "GAGCA":1, "GAGCT":0, "GAGCC":1, "GAGCG":0, "GAGGA":0, "GAGGT":1, "GAGGC":1, "GAGGG":0, |
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110 "GTAAA":3, "GTAAT":0, "GTAAC":0, "GTAAG":0, "GTATA":1, "GTATT":0, "GTATC":0, "GTATG":0, "GTACA":1, "GTACT":0, "GTACC":2, "GTACG":0, "GTAGA":0, "GTAGT":0, "GTAGC":0, "GTAGG":0, |
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111 "GTTAA":0, "GTTAT":0, "GTTAC":0, "GTTAG":0, "GTTTA":0, "GTTTT":0, "GTTTC":0, "GTTTG":0, "GTTCA":0, "GTTCT":0, "GTTCC":0, "GTTCG":0, "GTTGA":0, "GTTGT":0, "GTTGC":0, "GTTGG":0, |
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112 "GTCAA":0, "GTCAT":0, "GTCAC":0, "GTCAG":0, "GTCTA":0, "GTCTT":0, "GTCTC":0, "GTCTG":0, "GTCCA":0, "GTCCT":0, "GTCCC":0, "GTCCG":0, "GTCGA":0, "GTCGT":0, "GTCGC":0, "GTCGG":1, |
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113 "GTGAA":0, "GTGAT":0, "GTGAC":1, "GTGAG":1, "GTGTA":0, "GTGTT":0, "GTGTC":0, "GTGTG":0, "GTGCA":0, "GTGCT":0, "GTGCC":0, "GTGCG":0, "GTGGA":0, "GTGGT":1, "GTGGC":0, "GTGGG":0, |
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114 "GCAAA":1, "GCAAT":0, "GCAAC":0, "GCAAG":0, "GCATA":0, "GCATT":0, "GCATC":1, "GCATG":0, "GCACA":1, "GCACT":0, "GCACC":0, "GCACG":0, "GCAGA":0, "GCAGT":1, "GCAGC":1, "GCAGG":0, |
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115 "GCTAA":0, "GCTAT":0, "GCTAC":0, "GCTAG":0, "GCTTA":0, "GCTTT":1, "GCTTC":1, "GCTTG":1, "GCTCA":0, "GCTCT":0, "GCTCC":0, "GCTCG":0, "GCTGA":1, "GCTGT":0, "GCTGC":0, "GCTGG":1, |
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116 "GCCAA":0, "GCCAT":0, "GCCAC":0, "GCCAG":0, "GCCTA":0, "GCCTT":0, "GCCTC":0, "GCCTG":0, "GCCCA":1, "GCCCT":0, "GCCCC":0, "GCCCG":0, "GCCGA":0, "GCCGT":0, "GCCGC":0, "GCCGG":0, |
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117 "GCGAA":0, "GCGAT":0, "GCGAC":0, "GCGAG":0, "GCGTA":0, "GCGTT":0, "GCGTC":0, "GCGTG":0, "GCGCA":0, "GCGCT":0, "GCGCC":0, "GCGCG":0, "GCGGA":0, "GCGGT":0, "GCGGC":0, "GCGGG":0, |
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118 "GGAAA":1, "GGAAT":1, "GGAAC":1, "GGAAG":1, "GGATA":0, "GGATT":1, "GGATC":0, "GGATG":0, "GGACA":0, "GGACT":0, "GGACC":0, "GGACG":0, "GGAGA":1, "GGAGT":1, "GGAGC":1, "GGAGG":2, |
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119 "GGTAA":2, "GGTAT":1, "GGTAC":1, "GGTAG":0, "GGTTA":0, "GGTTT":0, "GGTTC":0, "GGTTG":0, "GGTCA":0, "GGTCT":0, "GGTCC":0, "GGTCG":1, "GGTGA":0, "GGTGT":0, "GGTGC":0, "GGTGG":0, |
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120 "GGCAA":0, "GGCAT":0, "GGCAC":0, "GGCAG":2, "GGCTA":0, "GGCTT":1, "GGCTC":0, "GGCTG":0, "GGCCA":0, "GGCCT":0, "GGCCC":0, "GGCCG":0, "GGCGA":0, "GGCGT":0, "GGCGC":0, "GGCGG":0, |
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121 "GGGAA":2, "GGGAT":0, "GGGAC":0, "GGGAG":0, "GGGTA":1, "GGGTT":0, "GGGTC":0, "GGGTG":0, "GGGCA":0, "GGGCT":0, "GGGCC":0, "GGGCG":0, "GGGGA":0, "GGGGT":1, "GGGGC":0, "GGGGG":0 |
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122 }, |
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123 "overrepresented_sequences": { |
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124 } |
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125 }, |
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126 "read1_after_filtering": { |
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127 "total_reads": 2, |
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128 "total_bases": 286, |
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129 "q20_bases": 246, |
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130 "q30_bases": 226, |
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131 "total_cycles": 143, |
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132 "quality_curves": { |
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133 "A":[36,36,21,25,36,23,34,32,25,36,14,34,36,26.5,21,36,36,14,14,36,36,36,21,28.5,36,34,36,36,36,36,36,36,36,25,36,25,25,36,25,34,36,36,36,36,36,25,32,25,34,36,36,25,36,36,32,36,36,36,36,34,36,36,36,36,36,28.5,36,36,36,36,32,14,36,25,34,25,28.5,36,25,28.5,14,36,28.5,36,36,36,36,36,21,36,25,36,34,34,34,25,36,32,25,36,36,36,36,36,36,25,31.5,36,36,36,34,36,36,25,34,25,36,36,27,32,36,36,36,34,36,36,36,23,36,32,31.5,36,36,20.5,34,34,36,36,14,36,36,36,25], |
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134 "T":[36,36,28.5,25,36,32,36,32,25,36,25,34,36,26.5,28.5,36,36,25,36,34,36,36,28.5,28.5,25,34,34,36,25,25,36,36,36,25,36,36,36,36,25,36,34,25,36,36,36,25,36,25,32,36,36,25,36,36,32,25,25,36,36,32,36,36,36,36,36,28.5,36,36,32,32,34,25,36,25,34,25,28.5,36,25,28.5,14,25,36,27,36,34,34,36,28.5,36,36,31.5,32,36,36,25,36,32,25,36,36,36,36,36,36,36,31.5,27,36,36,34,36,25,25,34,25,36,36,29.5,29.5,36,25,34,34,36,14,27,23,34,36,31.5,14,36,20.5,34,34,32,36,23,34,27,36,25], |
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135 "C":[36,36,28.5,36,36,23,32,32,25,36,25,34,36,26.5,28.5,36,36,25,25,34,36,36,28.5,28.5,14,32,32,36,14,14,36,36,36,14,36,25,25,36,25,32,32,14,36,36,36,25,34,25,34,36,36,25,36,36,32,25,25,36,36,34,36,36,36,36,36,28.5,36,36,34,34,34,36,36,14,32,14,28.5,36,25,21,14,25,21,31.5,36,32,32,36,28.5,36,14,27,34,34,34,25,36,32,25,36,36,36,36,36,36,14,31.5,31.5,36,36,34,36,25,25,34,25,36,36,32,27,36,25,32,34,36,25,31.5,23,32,34,31.5,25,36,20.5,34,34,34,36,23,34,31.5,36,25], |
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136 "G":[36,36,36,14,36,14,34,32,25,36,36,34,36,26.5,36,36,36,36,25,32,36,36,36,28.5,25,36,34,36,25,25,36,36,36,36,36,14,14,36,25,34,34,25,36,36,36,25,34,25,36,36,36,25,36,36,32,14,14,36,36,36,36,36,36,36,36,28.5,36,36,34,34,36,25,36,36,36,36,28.5,36,25,36,14,14,28.5,31.5,36,34,34,36,36,36,25,31.5,36,32,32,25,36,32,25,36,36,36,36,36,36,25,31.5,31.5,36,36,34,36,14,25,34,25,36,36,29.5,29.5,36,14,34,34,36,25,31.5,23,34,34,31.5,25,36,20.5,34,34,34,36,32,32,31.5,36,25], |
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137 "mean":[36,36,28.5,25,36,23,34,32,25,36,25,34,36,26.5,28.5,36,36,25,25,34,36,36,28.5,28.5,25,34,34,36,25,25,36,36,36,25,36,25,25,36,25,34,34,25,36,36,36,25,34,25,34,36,36,25,36,36,32,25,25,36,36,34,36,36,36,36,36,28.5,36,36,34,34,34,25,36,25,34,25,28.5,36,25,28.5,14,25,28.5,31.5,36,34,34,36,28.5,36,25,31.5,34,34,34,25,36,32,25,36,36,36,36,36,36,25,31.5,31.5,36,36,34,36,25,25,34,25,36,36,29.5,29.5,36,25,34,34,36,25,31.5,23,34,34,31.5,25,36,20.5,34,34,34,36,23,34,31.5,36,25] |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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138 }, |
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139 "content_curves": { |
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140 "A":[0,0,0.5,0,1,0,0,0.5,0,0,0.5,1,0.5,1,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,0.5,0.5,0.5,0,0,0,0,0,0,0,1,0,0.5,0.5,1,0.5,0.5,0,0.5,0,0,0.5,0.5,1,0.5,0,0.5,0.5,0.5,0,0.5,0,0,0,1,1,1,0,0.5,0,0.5,0.5,0.5,0.5,0.5,0,0,0,1,0.5,0,0,0.5,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,0,0,0.5,0,0,0,1,0,1,0,0,0.5,0,0.5,1,0,0,1,0.5,0.5,0.5,1,1,0.5,0,0,0,0.5,1,0.5,0.5,0,0.5,0.5,1,1,0.5,0.5,0,0.5,0.5,0,0.5,0.5,1,0,1,0.5,0.5,0.5,0.5,0.5,0.5,0], |
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141 "T":[0.5,0.5,0,0,0,0.5,0.5,0,0,0.5,0,0,0.5,0,0,0.5,0,0,0.5,0,0.5,0,0,0,0,0,0,0,0,0,0.5,1,0,0,0.5,0.5,0.5,1,0,0.5,0,0,0,0,0,0,0.5,1,0.5,0.5,0,0,0,0,0,0,0,1,0,0.5,0.5,0,0,0,0,1,0.5,1,0.5,0.5,0,0,0.5,0,0,0,0,0,0,0,0.5,0,0.5,0.5,0.5,0,0,0.5,0,0,0.5,0,0.5,0.5,0.5,0,0,0,1,0.5,0.5,0,0,0,0,0.5,0,0.5,0,0,0,0,0,1,0,0,0.5,0,0,0,1,0,0,0,0,0.5,0.5,1,0,0.5,1,0.5,0.5,0,0,0,0.5,0.5,0,0,0.5,0.5,1], |
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142 "C":[0,0.5,0,0.5,0,0,0.5,0,1,0.5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5,0.5,0.5,0,0.5,0.5,0,0,1,0.5,0.5,0,0,0,0,0.5,0.5,0.5,0,0,0.5,1,0,0,0,0,0.5,0,0,0,0,0,0,0,0.5,0,0,0.5,0,0,0,0,0,0,0,0,0,0.5,0,0.5,0.5,0.5,0,0,0,0.5,0,0,0.5,0,0,0.5,0.5,0,0,0.5,0.5,0.5,0,0,0,0,1,0,0,0.5,0,0.5,0,0,0,0.5,0,0,0.5,0.5,0,0,0,0,0,0,0,0,0.5,0.5,0,0,0.5,0,0,0,0,0,0.5,0,0,0,0,0,1,0,0,0,0,0,0,0,0], |
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143 "G":[0.5,0,0.5,0.5,0,0.5,0,0.5,0,0,0.5,0,0,0,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,1,0,0.5,0,0.5,0,0,0,0,0,0.5,0,0.5,0.5,0,0,0,0,0,0,0.5,0,0,0,0,0.5,0,0,0,0.5,1,0.5,0.5,0.5,0,0,0.5,0.5,0.5,0,0,0,0,0,0,0,0,0.5,0,0,0.5,0.5,0.5,0,0.5,1,0.5,0,0.5,0,0,0,0,0,0,0.5,0.5,0,0,0.5,0.5,0.5,0,0,0,0,0,0,0.5,0.5,0,1,0,0,0,0,0,0,0,0.5,0,1,1,0,0,0,0,0,0.5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5,0.5,0,0,0], |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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144 "N":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0], |
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145 "GC":[0.5,0.5,0.5,1,0,0.5,0.5,0.5,1,0.5,0.5,0,0,0,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,1,0.5,1,0.5,0.5,0.5,0.5,0,0,1,1,0.5,0.5,0.5,0,0,0.5,0.5,0.5,0,0.5,0.5,1,0,0,0.5,0,0.5,0,0.5,1,0.5,0.5,0.5,0,0.5,0.5,0.5,1,0,0,0,0,0,0,0,0,0.5,0.5,0,1,1,1,0,0.5,1,1,0,0.5,0.5,0,0,0.5,0.5,0,0.5,1,0.5,0.5,0.5,0.5,0.5,0,1,0,0,0.5,0,1,0.5,0,1,0.5,0,0,0.5,0.5,0,0,0.5,0,1,1,0,0,0.5,0.5,0,0.5,0.5,0,0,0,0,0,0.5,0,0,0,0,0,1,0,0,0,0.5,0.5,0,0,0] |
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146 }, |
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147 "kmer_count": { |
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148 "AAAAA":2, "AAAAT":2, "AAAAC":2, "AAAAG":1, "AAATA":3, "AAATT":2, "AAATC":1, "AAATG":1, "AAACA":2, "AAACT":1, "AAACC":2, "AAACG":0, "AAAGA":0, "AAAGT":2, "AAAGC":0, "AAAGG":4, |
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149 "AATAA":3, "AATAT":4, "AATAC":0, "AATAG":0, "AATTA":0, "AATTT":2, "AATTC":0, "AATTG":0, "AATCA":0, "AATCT":0, "AATCC":0, "AATCG":1, "AATGA":0, "AATGT":0, "AATGC":0, "AATGG":1, |
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150 "AACAA":2, "AACAT":0, "AACAC":0, "AACAG":0, "AACTA":0, "AACTT":0, "AACTC":1, "AACTG":0, "AACCA":0, "AACCT":2, "AACCC":1, "AACCG":0, "AACGA":0, "AACGT":0, "AACGC":0, "AACGG":0, |
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151 "AAGAA":0, "AAGAT":0, "AAGAC":0, "AAGAG":0, "AAGTA":1, "AAGTT":0, "AAGTC":0, "AAGTG":2, "AAGCA":0, "AAGCT":1, "AAGCC":0, "AAGCG":0, "AAGGA":3, "AAGGT":1, "AAGGC":0, "AAGGG":1, |
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152 "ATAAA":4, "ATAAT":1, "ATAAC":0, "ATAAG":1, "ATATA":1, "ATATT":2, "ATATC":0, "ATATG":0, "ATACA":0, "ATACT":0, "ATACC":0, "ATACG":0, "ATAGA":0, "ATAGT":0, "ATAGC":0, "ATAGG":0, |
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153 "ATTAA":2, "ATTAT":0, "ATTAC":0, "ATTAG":0, "ATTTA":1, "ATTTT":1, "ATTTC":2, "ATTTG":1, "ATTCA":1, "ATTCT":0, "ATTCC":0, "ATTCG":0, "ATTGA":0, "ATTGT":0, "ATTGC":0, "ATTGG":0, |
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154 "ATCAA":1, "ATCAT":0, "ATCAC":1, "ATCAG":0, "ATCTA":0, "ATCTT":0, "ATCTC":0, "ATCTG":0, "ATCCA":0, "ATCCT":0, "ATCCC":0, "ATCCG":0, "ATCGA":0, "ATCGT":0, "ATCGC":2, "ATCGG":0, |
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155 "ATGAA":0, "ATGAT":0, "ATGAC":0, "ATGAG":0, "ATGTA":0, "ATGTT":0, "ATGTC":0, "ATGTG":0, "ATGCA":0, "ATGCT":0, "ATGCC":0, "ATGCG":0, "ATGGA":1, "ATGGT":0, "ATGGC":0, "ATGGG":0, |
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156 "ACAAA":2, "ACAAT":0, "ACAAC":0, "ACAAG":1, "ACATA":0, "ACATT":3, "ACATC":2, "ACATG":0, "ACACA":0, "ACACT":0, "ACACC":0, "ACACG":0, "ACAGA":0, "ACAGT":0, "ACAGC":0, "ACAGG":0, |
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157 "ACTAA":0, "ACTAT":0, "ACTAC":0, "ACTAG":0, "ACTTA":0, "ACTTT":0, "ACTTC":0, "ACTTG":0, "ACTCA":0, "ACTCT":1, "ACTCC":0, "ACTCG":0, "ACTGA":0, "ACTGT":0, "ACTGC":0, "ACTGG":0, |
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158 "ACCAA":1, "ACCAT":0, "ACCAC":0, "ACCAG":0, "ACCTA":0, "ACCTT":2, "ACCTC":0, "ACCTG":1, "ACCCA":2, "ACCCT":0, "ACCCC":0, "ACCCG":0, "ACCGA":0, "ACCGT":0, "ACCGC":0, "ACCGG":0, |
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159 "ACGAA":0, "ACGAT":0, "ACGAC":0, "ACGAG":0, "ACGTA":0, "ACGTT":0, "ACGTC":0, "ACGTG":0, "ACGCA":0, "ACGCT":0, "ACGCC":0, "ACGCG":0, "ACGGA":0, "ACGGT":0, "ACGGC":0, "ACGGG":0, |
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160 "AGAAA":1, "AGAAT":0, "AGAAC":0, "AGAAG":0, "AGATA":0, "AGATT":0, "AGATC":0, "AGATG":0, "AGACA":1, "AGACT":0, "AGACC":0, "AGACG":0, "AGAGA":1, "AGAGT":0, "AGAGC":0, "AGAGG":0, |
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161 "AGTAA":1, "AGTAT":0, "AGTAC":1, "AGTAG":0, "AGTTA":0, "AGTTT":0, "AGTTC":0, "AGTTG":0, "AGTCA":0, "AGTCT":0, "AGTCC":0, "AGTCG":0, "AGTGA":2, "AGTGT":0, "AGTGC":0, "AGTGG":1, |
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162 "AGCAA":0, "AGCAT":1, "AGCAC":0, "AGCAG":0, "AGCTA":0, "AGCTT":1, "AGCTC":0, "AGCTG":1, "AGCCA":0, "AGCCT":0, "AGCCC":1, "AGCCG":0, "AGCGA":0, "AGCGT":0, "AGCGC":0, "AGCGG":0, |
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163 "AGGAA":1, "AGGAT":1, "AGGAC":0, "AGGAG":2, "AGGTA":1, "AGGTT":0, "AGGTC":1, "AGGTG":0, "AGGCA":1, "AGGCT":0, "AGGCC":0, "AGGCG":0, "AGGGA":0, "AGGGT":0, "AGGGC":0, "AGGGG":1, |
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164 "TAAAA":3, "TAAAT":1, "TAAAC":3, "TAAAG":2, "TAATA":2, "TAATT":0, "TAATC":0, "TAATG":0, "TAACA":0, "TAACT":0, "TAACC":0, "TAACG":0, "TAAGA":0, "TAAGT":0, "TAAGC":1, "TAAGG":0, |
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165 "TATAA":3, "TATAT":0, "TATAC":0, "TATAG":0, "TATTA":1, "TATTT":0, "TATTC":1, "TATTG":0, "TATCA":0, "TATCT":0, "TATCC":0, "TATCG":0, "TATGA":0, "TATGT":0, "TATGC":0, "TATGG":0, |
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166 "TACAA":0, "TACAT":2, "TACAC":0, "TACAG":0, "TACTA":0, "TACTT":0, "TACTC":0, "TACTG":0, "TACCA":1, "TACCT":0, "TACCC":1, "TACCG":0, "TACGA":0, "TACGT":0, "TACGC":0, "TACGG":0, |
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167 "TAGAA":0, "TAGAT":0, "TAGAC":0, "TAGAG":0, "TAGTA":0, "TAGTT":0, "TAGTC":0, "TAGTG":0, "TAGCA":0, "TAGCT":0, "TAGCC":0, "TAGCG":0, "TAGGA":0, "TAGGT":0, "TAGGC":0, "TAGGG":0, |
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168 "TTAAA":2, "TTAAT":1, "TTAAC":0, "TTAAG":0, "TTATA":1, "TTATT":0, "TTATC":0, "TTATG":0, "TTACA":1, "TTACT":0, "TTACC":0, "TTACG":0, "TTAGA":0, "TTAGT":0, "TTAGC":0, "TTAGG":0, |
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169 "TTTAA":1, "TTTAT":1, "TTTAC":1, "TTTAG":0, "TTTTA":1, "TTTTT":1, "TTTTC":0, "TTTTG":0, "TTTCA":2, "TTTCT":0, "TTTCC":0, "TTTCG":0, "TTTGA":0, "TTTGT":0, "TTTGC":0, "TTTGG":1, |
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170 "TTCAA":1, "TTCAT":1, "TTCAC":0, "TTCAG":1, "TTCTA":0, "TTCTT":0, "TTCTC":0, "TTCTG":0, "TTCCA":0, "TTCCT":2, "TTCCC":0, "TTCCG":0, "TTCGA":0, "TTCGT":0, "TTCGC":0, "TTCGG":0, |
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171 "TTGAA":1, "TTGAT":0, "TTGAC":0, "TTGAG":0, "TTGTA":0, "TTGTT":0, "TTGTC":0, "TTGTG":0, "TTGCA":0, "TTGCT":0, "TTGCC":0, "TTGCG":0, "TTGGA":2, "TTGGT":0, "TTGGC":0, "TTGGG":0, |
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172 "TCAAA":2, "TCAAT":0, "TCAAC":0, "TCAAG":0, "TCATA":0, "TCATT":1, "TCATC":0, "TCATG":0, "TCACA":1, "TCACT":0, "TCACC":0, "TCACG":0, "TCAGA":0, "TCAGT":0, "TCAGC":0, "TCAGG":1, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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173 "TCTAA":0, "TCTAT":0, "TCTAC":0, "TCTAG":0, "TCTTA":0, "TCTTT":0, "TCTTC":0, "TCTTG":0, "TCTCA":0, "TCTCT":0, "TCTCC":0, "TCTCG":0, "TCTGA":0, "TCTGT":1, "TCTGC":0, "TCTGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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174 "TCCAA":0, "TCCAT":0, "TCCAC":0, "TCCAG":0, "TCCTA":0, "TCCTT":0, "TCCTC":0, "TCCTG":2, "TCCCA":0, "TCCCT":0, "TCCCC":0, "TCCCG":0, "TCCGA":0, "TCCGT":0, "TCCGC":0, "TCCGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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175 "TCGAA":0, "TCGAT":0, "TCGAC":0, "TCGAG":0, "TCGTA":0, "TCGTT":0, "TCGTC":0, "TCGTG":0, "TCGCA":0, "TCGCT":2, "TCGCC":0, "TCGCG":0, "TCGGA":0, "TCGGT":0, "TCGGC":0, "TCGGG":1, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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176 "TGAAA":2, "TGAAT":0, "TGAAC":0, "TGAAG":0, "TGATA":0, "TGATT":0, "TGATC":0, "TGATG":0, "TGACA":1, "TGACT":0, "TGACC":0, "TGACG":0, "TGAGA":0, "TGAGT":0, "TGAGC":1, "TGAGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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177 "TGTAA":0, "TGTAT":0, "TGTAC":1, "TGTAG":0, "TGTTA":0, "TGTTT":0, "TGTTC":0, "TGTTG":0, "TGTCA":0, "TGTCT":0, "TGTCC":0, "TGTCG":0, "TGTGA":0, "TGTGT":0, "TGTGC":0, "TGTGG":0, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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178 "TGCAA":1, "TGCAT":0, "TGCAC":0, "TGCAG":0, "TGCTA":0, "TGCTT":0, "TGCTC":0, "TGCTG":0, "TGCCA":0, "TGCCT":0, "TGCCC":0, "TGCCG":0, "TGCGA":0, "TGCGT":0, "TGCGC":0, "TGCGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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179 "TGGAA":1, "TGGAT":0, "TGGAC":0, "TGGAG":2, "TGGTA":2, "TGGTT":0, "TGGTC":0, "TGGTG":0, "TGGCA":1, "TGGCT":0, "TGGCC":0, "TGGCG":0, "TGGGA":1, "TGGGT":0, "TGGGC":0, "TGGGG":0, |
1c2db0054039
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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180 "CAAAA":1, "CAAAT":2, "CAAAC":0, "CAAAG":2, "CAATA":1, "CAATT":0, "CAATC":0, "CAATG":0, "CAACA":0, "CAACT":0, "CAACC":0, "CAACG":0, "CAAGA":0, "CAAGT":1, "CAAGC":0, "CAAGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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181 "CATAA":0, "CATAT":0, "CATAC":0, "CATAG":0, "CATTA":1, "CATTT":3, "CATTC":0, "CATTG":0, "CATCA":2, "CATCT":0, "CATCC":0, "CATCG":1, "CATGA":0, "CATGT":0, "CATGC":0, "CATGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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182 "CACAA":1, "CACAT":1, "CACAC":0, "CACAG":0, "CACTA":0, "CACTT":0, "CACTC":0, "CACTG":0, "CACCA":0, "CACCT":1, "CACCC":0, "CACCG":0, "CACGA":0, "CACGT":0, "CACGC":0, "CACGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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183 "CAGAA":0, "CAGAT":0, "CAGAC":1, "CAGAG":0, "CAGTA":0, "CAGTT":0, "CAGTC":0, "CAGTG":1, "CAGCA":0, "CAGCT":1, "CAGCC":0, "CAGCG":0, "CAGGA":1, "CAGGT":0, "CAGGC":1, "CAGGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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184 "CTAAA":0, "CTAAT":0, "CTAAC":0, "CTAAG":0, "CTATA":0, "CTATT":0, "CTATC":0, "CTATG":0, "CTACA":0, "CTACT":0, "CTACC":0, "CTACG":0, "CTAGA":0, "CTAGT":0, "CTAGC":0, "CTAGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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185 "CTTAA":0, "CTTAT":0, "CTTAC":0, "CTTAG":0, "CTTTA":1, "CTTTT":0, "CTTTC":0, "CTTTG":0, "CTTCA":0, "CTTCT":0, "CTTCC":2, "CTTCG":0, "CTTGA":1, "CTTGT":0, "CTTGC":0, "CTTGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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186 "CTCAA":0, "CTCAT":0, "CTCAC":0, "CTCAG":0, "CTCTA":0, "CTCTT":0, "CTCTC":0, "CTCTG":1, "CTCCA":0, "CTCCT":0, "CTCCC":0, "CTCCG":0, "CTCGA":0, "CTCGT":0, "CTCGC":0, "CTCGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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187 "CTGAA":1, "CTGAT":0, "CTGAC":0, "CTGAG":0, "CTGTA":1, "CTGTT":0, "CTGTC":0, "CTGTG":0, "CTGCA":1, "CTGCT":0, "CTGCC":0, "CTGCG":0, "CTGGA":0, "CTGGT":1, "CTGGC":1, "CTGGG":1, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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188 "CCAAA":0, "CCAAT":1, "CCAAC":0, "CCAAG":0, "CCATA":0, "CCATT":0, "CCATC":0, "CCATG":0, "CCACA":0, "CCACT":0, "CCACC":1, "CCACG":0, "CCAGA":1, "CCAGT":0, "CCAGC":0, "CCAGG":1, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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189 "CCTAA":0, "CCTAT":0, "CCTAC":0, "CCTAG":0, "CCTTA":0, "CCTTT":0, "CCTTC":1, "CCTTG":1, "CCTCA":0, "CCTCT":0, "CCTCC":0, "CCTCG":0, "CCTGA":0, "CCTGT":0, "CCTGC":1, "CCTGG":2, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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190 "CCCAA":0, "CCCAT":0, "CCCAC":1, "CCCAG":2, "CCCTA":0, "CCCTT":0, "CCCTC":0, "CCCTG":0, "CCCCA":0, "CCCCT":0, "CCCCC":0, "CCCCG":0, "CCCGA":0, "CCCGT":0, "CCCGC":0, "CCCGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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191 "CCGAA":0, "CCGAT":0, "CCGAC":0, "CCGAG":0, "CCGTA":0, "CCGTT":0, "CCGTC":0, "CCGTG":0, "CCGCA":0, "CCGCT":0, "CCGCC":0, "CCGCG":0, "CCGGA":0, "CCGGT":0, "CCGGC":0, "CCGGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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192 "CGAAA":0, "CGAAT":0, "CGAAC":0, "CGAAG":0, "CGATA":0, "CGATT":0, "CGATC":0, "CGATG":0, "CGACA":0, "CGACT":0, "CGACC":0, "CGACG":0, "CGAGA":0, "CGAGT":0, "CGAGC":0, "CGAGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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193 "CGTAA":0, "CGTAT":0, "CGTAC":0, "CGTAG":0, "CGTTA":0, "CGTTT":0, "CGTTC":0, "CGTTG":0, "CGTCA":0, "CGTCT":0, "CGTCC":0, "CGTCG":0, "CGTGA":0, "CGTGT":0, "CGTGC":0, "CGTGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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194 "CGCAA":0, "CGCAT":0, "CGCAC":0, "CGCAG":0, "CGCTA":0, "CGCTT":1, "CGCTC":0, "CGCTG":1, "CGCCA":0, "CGCCT":0, "CGCCC":0, "CGCCG":0, "CGCGA":0, "CGCGT":0, "CGCGC":0, "CGCGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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195 "CGGAA":0, "CGGAT":0, "CGGAC":0, "CGGAG":0, "CGGTA":0, "CGGTT":0, "CGGTC":0, "CGGTG":0, "CGGCA":0, "CGGCT":0, "CGGCC":0, "CGGCG":0, "CGGGA":1, "CGGGT":0, "CGGGC":0, "CGGGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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196 "GAAAA":1, "GAAAT":2, "GAAAC":0, "GAAAG":1, "GAATA":1, "GAATT":0, "GAATC":0, "GAATG":0, "GAACA":0, "GAACT":0, "GAACC":1, "GAACG":0, "GAAGA":0, "GAAGT":0, "GAAGC":0, "GAAGG":1, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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197 "GATAA":0, "GATAT":0, "GATAC":0, "GATAG":0, "GATTA":0, "GATTT":0, "GATTC":0, "GATTG":0, "GATCA":0, "GATCT":0, "GATCC":0, "GATCG":0, "GATGA":0, "GATGT":0, "GATGC":0, "GATGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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198 "GACAA":0, "GACAT":2, "GACAC":0, "GACAG":0, "GACTA":0, "GACTT":0, "GACTC":0, "GACTG":0, "GACCA":0, "GACCT":0, "GACCC":0, "GACCG":0, "GACGA":0, "GACGT":0, "GACGC":0, "GACGG":0, |
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199 "GAGAA":1, "GAGAT":0, "GAGAC":0, "GAGAG":1, "GAGTA":1, "GAGTT":0, "GAGTC":0, "GAGTG":0, "GAGCA":1, "GAGCT":0, "GAGCC":1, "GAGCG":0, "GAGGA":0, "GAGGT":1, "GAGGC":0, "GAGGG":0, |
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200 "GTAAA":3, "GTAAT":0, "GTAAC":0, "GTAAG":0, "GTATA":1, "GTATT":0, "GTATC":0, "GTATG":0, "GTACA":1, "GTACT":0, "GTACC":2, "GTACG":0, "GTAGA":0, "GTAGT":0, "GTAGC":0, "GTAGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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201 "GTTAA":0, "GTTAT":0, "GTTAC":0, "GTTAG":0, "GTTTA":0, "GTTTT":0, "GTTTC":0, "GTTTG":0, "GTTCA":0, "GTTCT":0, "GTTCC":0, "GTTCG":0, "GTTGA":0, "GTTGT":0, "GTTGC":0, "GTTGG":0, |
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202 "GTCAA":0, "GTCAT":0, "GTCAC":0, "GTCAG":0, "GTCTA":0, "GTCTT":0, "GTCTC":0, "GTCTG":0, "GTCCA":0, "GTCCT":0, "GTCCC":0, "GTCCG":0, "GTCGA":0, "GTCGT":0, "GTCGC":0, "GTCGG":1, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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203 "GTGAA":0, "GTGAT":0, "GTGAC":1, "GTGAG":1, "GTGTA":0, "GTGTT":0, "GTGTC":0, "GTGTG":0, "GTGCA":0, "GTGCT":0, "GTGCC":0, "GTGCG":0, "GTGGA":0, "GTGGT":1, "GTGGC":0, "GTGGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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204 "GCAAA":1, "GCAAT":0, "GCAAC":0, "GCAAG":0, "GCATA":0, "GCATT":0, "GCATC":1, "GCATG":0, "GCACA":1, "GCACT":0, "GCACC":0, "GCACG":0, "GCAGA":0, "GCAGT":1, "GCAGC":1, "GCAGG":0, |
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205 "GCTAA":0, "GCTAT":0, "GCTAC":0, "GCTAG":0, "GCTTA":0, "GCTTT":1, "GCTTC":1, "GCTTG":0, "GCTCA":0, "GCTCT":0, "GCTCC":0, "GCTCG":0, "GCTGA":1, "GCTGT":0, "GCTGC":0, "GCTGG":1, |
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206 "GCCAA":0, "GCCAT":0, "GCCAC":0, "GCCAG":0, "GCCTA":0, "GCCTT":0, "GCCTC":0, "GCCTG":0, "GCCCA":1, "GCCCT":0, "GCCCC":0, "GCCCG":0, "GCCGA":0, "GCCGT":0, "GCCGC":0, "GCCGG":0, |
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207 "GCGAA":0, "GCGAT":0, "GCGAC":0, "GCGAG":0, "GCGTA":0, "GCGTT":0, "GCGTC":0, "GCGTG":0, "GCGCA":0, "GCGCT":0, "GCGCC":0, "GCGCG":0, "GCGGA":0, "GCGGT":0, "GCGGC":0, "GCGGG":0, |
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208 "GGAAA":1, "GGAAT":1, "GGAAC":1, "GGAAG":1, "GGATA":0, "GGATT":1, "GGATC":0, "GGATG":0, "GGACA":0, "GGACT":0, "GGACC":0, "GGACG":0, "GGAGA":1, "GGAGT":1, "GGAGC":1, "GGAGG":1, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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209 "GGTAA":2, "GGTAT":1, "GGTAC":1, "GGTAG":0, "GGTTA":0, "GGTTT":0, "GGTTC":0, "GGTTG":0, "GGTCA":0, "GGTCT":0, "GGTCC":0, "GGTCG":1, "GGTGA":0, "GGTGT":0, "GGTGC":0, "GGTGG":0, |
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210 "GGCAA":0, "GGCAT":0, "GGCAC":0, "GGCAG":2, "GGCTA":0, "GGCTT":0, "GGCTC":0, "GGCTG":0, "GGCCA":0, "GGCCT":0, "GGCCC":0, "GGCCG":0, "GGCGA":0, "GGCGT":0, "GGCGC":0, "GGCGG":0, |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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211 "GGGAA":2, "GGGAT":0, "GGGAC":0, "GGGAG":0, "GGGTA":1, "GGGTT":0, "GGGTC":0, "GGGTG":0, "GGGCA":0, "GGGCT":0, "GGGCC":0, "GGGCG":0, "GGGGA":0, "GGGGT":1, "GGGGC":0, "GGGGG":0 |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
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212 }, |
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213 "overrepresented_sequences": { |
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214 } |
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215 }, |
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216 "command": "fastp --thread 1 --report_title fastp report for R1_fq.fastq -i R1_fq.fastq -o first.fastq -U --umi_loc read1 --umi_len 8 " |
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217 } |