Mercurial > repos > iuc > multiqc
diff test-data/hicexplorer1.log @ 6:01237d721a9f draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit d9175b08720c657b7a4521472450dd5ac6fd9361
| author | iuc |
|---|---|
| date | Sat, 23 Dec 2017 15:57:55 -0500 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/hicexplorer1.log Sat Dec 23 15:57:55 2017 -0500 @@ -0,0 +1,29 @@ + +File small_test_matrix.h5 +Pairs considered 99983 +Min rest. site distance 303 +Max rest. site distance 800 + +# count (percentage w.r.t. total sequenced reads) +Pairs mappable, unique and high quality 52726 (52.73) +Pairs used 37321 (37.33) +One mate unmapped 8777 (8.78) +One mate not unique 3603 (3.60) +One mate low quality 34877 (34.88) + +# count (percentage w.r.t. mappable, unique and high quality pairs) +dangling end 0 (0.00) +self ligation (removed) 0 (0.00) +One mate not close to rest site 0 (0.00) +same fragment (800 bp) 15393 (29.19) +self circle 0 (0.00) +duplicated pairs 12 (0.02) + +# count (percentage w.r.t. total valid pairs used) +inter chromosomal 5955 (15.96) +short range < 20kb 8853 (23.72) +long range 22513 (60.32) +inward pairs 7145 (19.14) +outward pairs 9731 (26.07) +left pairs 7156 (19.17) +right pairs 7334 (19.65)