Mercurial > repos > iuc > multiqc
diff test-data/post_aligner_soft_stats.tabular @ 6:01237d721a9f draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit d9175b08720c657b7a4521472450dd5ac6fd9361
| author | iuc |
|---|---|
| date | Sat, 23 Dec 2017 15:57:55 -0500 |
| parents | 3bad335ccea9 |
| children | e0f4a651c6b9 |
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--- a/test-data/post_aligner_soft_stats.tabular Tue Dec 05 05:24:03 2017 -0500 +++ b/test-data/post_aligner_soft_stats.tabular Sat Dec 23 15:57:55 2017 -0500 @@ -1,21 +1,21 @@ -Sample QUAST_N50 QUAST_Total_length featureCounts_percent_assigned featureCounts_Assigned Picard_PCT_PF_READS_ALIGNED Prokka_organism Prokka_contigs Prokka_bases Prokka_CDS Bcftools Stats_number_of_records Bcftools Stats_number_of_SNPs Bcftools Stats_number_of_indels Bcftools Stats_tstv Bcftools Stats_number_of_MNPs Bamtools_duplicates_pct Bamtools_mapped_reads_pct Picard_PERCENT_DUPLICATION Picard_summed_median Picard_summed_mean GATK VariantEval_known_titv GATK VariantEval_novel_titv HTSeq Count_percent_assigned HTSeq Count_assigned Picard_PCT_RIBOSOMAL_BASES Picard_PCT_MRNA_BASES Samtools Flagstat_mapped_passed Samtools Stats_error_rate Samtools Stats_non_primary_alignments Samtools Stats_reads_mapped Samtools Stats_reads_mapped_percent Samtools Stats_raw_total_sequences Samblaster_pct_dups +Sample QUAST_N50-2-1 QUAST_Total_length-2-1 featureCounts_Assigned-1 featureCounts_percent_assigned-1-1 Picard_PCT_PF_READS_ALIGNED-1 Prokka_contigs-1 Prokka_bases-1 Prokka_CDS-1 Prokka_organism-1 Bcftools Stats_number_of_SNPs-1 Bcftools Stats_tstv-1 Bcftools Stats_number_of_records-1 Bcftools Stats_number_of_MNPs-1 Bcftools Stats_number_of_indels-1 Bamtools_duplicates_pct-1-1 Bamtools_mapped_reads_pct-1-1 Picard_PERCENT_DUPLICATION-1 Picard_summed_mean-1 Picard_summed_median-1 HTSeq Count_percent_assigned-2 HTSeq Count_assigned-1 Picard_PCT_RIBOSOMAL_BASES-1 Picard_PCT_MRNA_BASES-1 Samtools Flagstat_mapped_passed-1-1 Samtools Stats_reads_mapped_percent-1 Samtools Stats_raw_total_sequences-1-1 Samtools Stats_reads_mapped-1 Samtools Stats_error_rate-1 Samtools Stats_non_primary_alignments-1 GATK VariantEval_known_titv-1 GATK VariantEval_novel_titv-1 Samblaster_pct_dups-1 14892_1#15 115136.0 18435361.0 -70: TopHat on data 1, data 4, and data 3: accepted_hits 70.82267755353567 321797 -75: TopHat on data 1, data 6, and data 5: accepted_hits 69.58585803304067 445012 -80: TopHat on data 1, data 8, and data 7: accepted_hits 71.76957768385707 394981 -85: TopHat on data 1, data 10, and data 9: accepted_hits 72.02454351337069 437485 -90: TopHat on data 1, data 12, and data 11: accepted_hits 71.33130826437625 388170 -95: TopHat on data 1, data 14, and data 13: accepted_hits 70.72517103678439 453929 +70: TopHat on data 1, data 4, and data 3: accepted_hits 321797 70.82267755353567 +75: TopHat on data 1, data 6, and data 5: accepted_hits 445012 69.58585803304067 +80: TopHat on data 1, data 8, and data 7: accepted_hits 394981 71.76957768385707 +85: TopHat on data 1, data 10, and data 9: accepted_hits 437485 72.02454351337069 +90: TopHat on data 1, data 12, and data 11: accepted_hits 388170 71.33130826437625 +95: TopHat on data 1, data 14, and data 13: accepted_hits 453929 70.72517103678439 D11_H4K16ac_Rep1_R1_fastq_gz 0.983085 -Sample1 Helicobacter pylori 30 1629978 1548 -Sample2 Escherichia coli 52 162997532523 1548 -Test1 5522770.0 4474244.0 902934.0 1.97 72330.0 +Sample1 30 1629978 1548 Helicobacter pylori +Sample2 52 162997532523 1548 Escherichia coli +Test1 4474244.0 1.97 5522770.0 72330.0 902934.0 bamtools 0.0 93.125 dataset_114 0.005582 -dataset_197 176 271.809759 -gatk_varianteval 0.0 2.2 -htseq 0.0 0 -picard_CollectRnaSeqMetrics_bam 79.62310000000001 -samtools_flagstat 20689039 -samtools_stats 0.004248509 12111.0 641821.0 100.0 641821.0 +dataset_197 271.809759 176 +htseq 0.0 0 +picard_CollectRnaSeqMetrics_bam 79.62310000000001 +samtools_flagstat 20689039 +samtools_stats 100.0 641821.0 641821.0 0.004248509 12111.0 +varianteval_1_gatk_varianteval 0.0 2.2 virtual-normal 1.28