view test-data/fastp1.json.txt @ 18:c19b16e5729c draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 263b1803fbf2622dbeb283b1d965690a5dc24ec9"
author iuc
date Thu, 19 Nov 2020 21:54:37 +0000
parents 1c2db0054039
children
line wrap: on
line source

{
	"summary": {
		"before_filtering": {
			"total_reads":2,
			"total_bases":302,
			"q20_bases":262,
			"q30_bases":241,
			"q20_rate":0.86755,
			"q30_rate":0.798013,
			"read1_mean_length":151,
			"gc_content":0.36755
		},
		"after_filtering": {
			"total_reads":2,
			"total_bases":286,
			"q20_bases":246,
			"q30_bases":226,
			"q20_rate":0.86014,
			"q30_rate":0.79021,
			"read1_mean_length":143,
			"gc_content":0.367133
		}
	},
	"filtering_result": {
		"passed_filter_reads": 2,
		"low_quality_reads": 0,
		"too_many_N_reads": 0,
		"too_short_reads": 0,
		"too_long_reads": 0
	},
	"duplication": {
		"rate": 0,
		"histogram": [2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0],
		"mean_gc": [0.407843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
	},
	"read1_before_filtering": {
		"total_reads": 2,
		"total_bases": 302,
		"q20_bases": 262,
		"q30_bases": 241,
		"total_cycles": 151,
		"quality_curves": {
			"A":[26.5,32,32,32,32,36,36,36,36,36,21,25,36,23,34,32,25,36,14,34,36,26.5,21,36,36,14,14,36,36,36,21,28.5,36,34,36,36,36,36,36,36,36,25,36,25,25,36,25,34,36,36,36,36,36,25,32,25,34,36,36,25,36,36,32,36,36,36,36,34,36,36,36,36,36,28.5,36,36,36,36,32,14,36,25,34,25,28.5,36,25,28.5,14,36,28.5,36,36,36,36,36,21,36,25,36,34,34,34,25,36,32,25,36,36,36,36,36,36,25,31.5,36,36,36,34,36,36,25,34,25,36,36,27,32,36,36,36,34,36,36,36,23,36,32,31.5,36,36,20.5,34,34,36,36,14,36,36,36,25],
			"T":[26.5,32,32,32,32,34,36,36,36,36,28.5,25,36,32,36,32,25,36,25,34,36,26.5,28.5,36,36,25,36,34,36,36,28.5,28.5,25,34,34,36,25,25,36,36,36,25,36,36,36,36,25,36,34,25,36,36,36,25,36,25,32,36,36,25,36,36,32,25,25,36,36,32,36,36,36,36,36,28.5,36,36,32,32,34,25,36,25,34,25,28.5,36,25,28.5,14,25,36,27,36,34,34,36,28.5,36,36,31.5,32,36,36,25,36,32,25,36,36,36,36,36,36,36,31.5,27,36,36,34,36,25,25,34,25,36,36,29.5,29.5,36,25,34,34,36,14,27,23,34,36,31.5,14,36,20.5,34,34,32,36,23,34,27,36,25],
			"C":[26.5,32,32,32,32,34,36,36,36,36,28.5,36,36,23,32,32,25,36,25,34,36,26.5,28.5,36,36,25,25,34,36,36,28.5,28.5,14,32,32,36,14,14,36,36,36,14,36,25,25,36,25,32,32,14,36,36,36,25,34,25,34,36,36,25,36,36,32,25,25,36,36,34,36,36,36,36,36,28.5,36,36,34,34,34,36,36,14,32,14,28.5,36,25,21,14,25,21,31.5,36,32,32,36,28.5,36,14,27,34,34,34,25,36,32,25,36,36,36,36,36,36,14,31.5,31.5,36,36,34,36,25,25,34,25,36,36,32,27,36,25,32,34,36,25,31.5,23,32,34,31.5,25,36,20.5,34,34,34,36,23,34,31.5,36,25],
			"G":[26.5,32,32,32,32,32,36,36,36,36,36,14,36,14,34,32,25,36,36,34,36,26.5,36,36,36,36,25,32,36,36,36,28.5,25,36,34,36,25,25,36,36,36,36,36,14,14,36,25,34,34,25,36,36,36,25,34,25,36,36,36,25,36,36,32,14,14,36,36,36,36,36,36,36,36,28.5,36,36,34,34,36,25,36,36,36,36,28.5,36,25,36,14,14,28.5,31.5,36,34,34,36,36,36,25,31.5,36,32,32,25,36,32,25,36,36,36,36,36,36,25,31.5,31.5,36,36,34,36,14,25,34,25,36,36,29.5,29.5,36,14,34,34,36,25,31.5,23,34,34,31.5,25,36,20.5,34,34,34,36,32,32,31.5,36,25],
			"mean":[26.5,32,32,32,32,34,36,36,36,36,28.5,25,36,23,34,32,25,36,25,34,36,26.5,28.5,36,36,25,25,34,36,36,28.5,28.5,25,34,34,36,25,25,36,36,36,25,36,25,25,36,25,34,34,25,36,36,36,25,34,25,34,36,36,25,36,36,32,25,25,36,36,34,36,36,36,36,36,28.5,36,36,34,34,34,25,36,25,34,25,28.5,36,25,28.5,14,25,28.5,31.5,36,34,34,36,28.5,36,25,31.5,34,34,34,25,36,32,25,36,36,36,36,36,36,25,31.5,31.5,36,36,34,36,25,25,34,25,36,36,29.5,29.5,36,25,34,34,36,25,31.5,23,34,34,31.5,25,36,20.5,34,34,34,36,23,34,31.5,36,25]
		},
		"content_curves": {
			"A":[0,1,0,0.5,1,0.5,0.5,0,0,0,0.5,0,1,0,0,0.5,0,0,0.5,1,0.5,1,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,0.5,0.5,0.5,0,0,0,0,0,0,0,1,0,0.5,0.5,1,0.5,0.5,0,0.5,0,0,0.5,0.5,1,0.5,0,0.5,0.5,0.5,0,0.5,0,0,0,1,1,1,0,0.5,0,0.5,0.5,0.5,0.5,0.5,0,0,0,1,0.5,0,0,0.5,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,0,0,0.5,0,0,0,1,0,1,0,0,0.5,0,0.5,1,0,0,1,0.5,0.5,0.5,1,1,0.5,0,0,0,0.5,1,0.5,0.5,0,0.5,0.5,1,1,0.5,0.5,0,0.5,0.5,0,0.5,0.5,1,0,1,0.5,0.5,0.5,0.5,0.5,0.5,0],
			"T":[1,0,0,0,0,0,0,0.5,0.5,0.5,0,0,0,0.5,0.5,0,0,0.5,0,0,0.5,0,0,0.5,0,0,0.5,0,0.5,0,0,0,0,0,0,0,0,0,0.5,1,0,0,0.5,0.5,0.5,1,0,0.5,0,0,0,0,0,0,0.5,1,0.5,0.5,0,0,0,0,0,0,0,1,0,0.5,0.5,0,0,0,0,1,0.5,1,0.5,0.5,0,0,0.5,0,0,0,0,0,0,0,0.5,0,0.5,0.5,0.5,0,0,0.5,0,0,0.5,0,0.5,0.5,0.5,0,0,0,1,0.5,0.5,0,0,0,0,0.5,0,0.5,0,0,0,0,0,1,0,0,0.5,0,0,0,1,0,0,0,0,0.5,0.5,1,0,0.5,1,0.5,0.5,0,0,0,0.5,0.5,0,0,0.5,0.5,1],
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			"N":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0],
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		},
		"kmer_count": {
			"AAAAA":2,			"AAAAT":3,			"AAAAC":2,			"AAAAG":1,			"AAATA":3,			"AAATT":2,			"AAATC":1,			"AAATG":2,			"AAACA":2,			"AAACT":1,			"AAACC":2,			"AAACG":0,			"AAAGA":0,			"AAAGT":2,			"AAAGC":0,			"AAAGG":4,
			"AATAA":3,			"AATAT":4,			"AATAC":0,			"AATAG":0,			"AATTA":0,			"AATTT":2,			"AATTC":0,			"AATTG":0,			"AATCA":0,			"AATCT":0,			"AATCC":0,			"AATCG":1,			"AATGA":0,			"AATGT":0,			"AATGC":1,			"AATGG":1,
			"AACAA":2,			"AACAT":0,			"AACAC":0,			"AACAG":0,			"AACTA":0,			"AACTT":0,			"AACTC":1,			"AACTG":0,			"AACCA":0,			"AACCT":2,			"AACCC":1,			"AACCG":0,			"AACGA":0,			"AACGT":0,			"AACGC":0,			"AACGG":0,
			"AAGAA":0,			"AAGAT":0,			"AAGAC":0,			"AAGAG":0,			"AAGTA":1,			"AAGTT":0,			"AAGTC":0,			"AAGTG":2,			"AAGCA":0,			"AAGCT":1,			"AAGCC":0,			"AAGCG":0,			"AAGGA":3,			"AAGGT":1,			"AAGGC":0,			"AAGGG":1,
			"ATAAA":4,			"ATAAT":1,			"ATAAC":0,			"ATAAG":1,			"ATATA":1,			"ATATT":2,			"ATATC":0,			"ATATG":0,			"ATACA":0,			"ATACT":0,			"ATACC":0,			"ATACG":0,			"ATAGA":0,			"ATAGT":0,			"ATAGC":0,			"ATAGG":0,
			"ATTAA":2,			"ATTAT":0,			"ATTAC":0,			"ATTAG":0,			"ATTTA":1,			"ATTTT":1,			"ATTTC":2,			"ATTTG":1,			"ATTCA":1,			"ATTCT":0,			"ATTCC":0,			"ATTCG":0,			"ATTGA":0,			"ATTGT":0,			"ATTGC":0,			"ATTGG":0,
			"ATCAA":1,			"ATCAT":0,			"ATCAC":1,			"ATCAG":0,			"ATCTA":0,			"ATCTT":0,			"ATCTC":0,			"ATCTG":0,			"ATCCA":0,			"ATCCT":0,			"ATCCC":0,			"ATCCG":0,			"ATCGA":0,			"ATCGT":0,			"ATCGC":2,			"ATCGG":0,
			"ATGAA":0,			"ATGAT":0,			"ATGAC":0,			"ATGAG":0,			"ATGTA":0,			"ATGTT":0,			"ATGTC":0,			"ATGTG":0,			"ATGCA":1,			"ATGCT":0,			"ATGCC":0,			"ATGCG":0,			"ATGGA":1,			"ATGGT":0,			"ATGGC":0,			"ATGGG":0,
			"ACAAA":3,			"ACAAT":0,			"ACAAC":0,			"ACAAG":1,			"ACATA":0,			"ACATT":3,			"ACATC":2,			"ACATG":0,			"ACACA":0,			"ACACT":0,			"ACACC":0,			"ACACG":0,			"ACAGA":0,			"ACAGT":0,			"ACAGC":0,			"ACAGG":0,
			"ACTAA":0,			"ACTAT":0,			"ACTAC":0,			"ACTAG":0,			"ACTTA":0,			"ACTTT":0,			"ACTTC":0,			"ACTTG":0,			"ACTCA":0,			"ACTCT":1,			"ACTCC":0,			"ACTCG":0,			"ACTGA":0,			"ACTGT":0,			"ACTGC":0,			"ACTGG":0,
			"ACCAA":1,			"ACCAT":0,			"ACCAC":0,			"ACCAG":0,			"ACCTA":0,			"ACCTT":2,			"ACCTC":0,			"ACCTG":1,			"ACCCA":2,			"ACCCT":0,			"ACCCC":0,			"ACCCG":0,			"ACCGA":0,			"ACCGT":0,			"ACCGC":0,			"ACCGG":0,
			"ACGAA":0,			"ACGAT":0,			"ACGAC":0,			"ACGAG":0,			"ACGTA":0,			"ACGTT":0,			"ACGTC":0,			"ACGTG":0,			"ACGCA":0,			"ACGCT":0,			"ACGCC":0,			"ACGCG":0,			"ACGGA":0,			"ACGGT":0,			"ACGGC":0,			"ACGGG":0,
			"AGAAA":1,			"AGAAT":0,			"AGAAC":0,			"AGAAG":0,			"AGATA":0,			"AGATT":0,			"AGATC":0,			"AGATG":0,			"AGACA":1,			"AGACT":0,			"AGACC":0,			"AGACG":0,			"AGAGA":1,			"AGAGT":0,			"AGAGC":0,			"AGAGG":0,
			"AGTAA":1,			"AGTAT":0,			"AGTAC":1,			"AGTAG":0,			"AGTTA":0,			"AGTTT":0,			"AGTTC":0,			"AGTTG":0,			"AGTCA":0,			"AGTCT":0,			"AGTCC":0,			"AGTCG":0,			"AGTGA":2,			"AGTGT":0,			"AGTGC":0,			"AGTGG":1,
			"AGCAA":0,			"AGCAT":1,			"AGCAC":0,			"AGCAG":0,			"AGCTA":0,			"AGCTT":1,			"AGCTC":0,			"AGCTG":1,			"AGCCA":0,			"AGCCT":0,			"AGCCC":1,			"AGCCG":0,			"AGCGA":0,			"AGCGT":0,			"AGCGC":0,			"AGCGG":0,
			"AGGAA":1,			"AGGAT":1,			"AGGAC":0,			"AGGAG":3,			"AGGTA":1,			"AGGTT":0,			"AGGTC":1,			"AGGTG":0,			"AGGCA":1,			"AGGCT":1,			"AGGCC":0,			"AGGCG":0,			"AGGGA":0,			"AGGGT":0,			"AGGGC":0,			"AGGGG":1,
			"TAAAA":3,			"TAAAT":1,			"TAAAC":3,			"TAAAG":2,			"TAATA":2,			"TAATT":0,			"TAATC":0,			"TAATG":0,			"TAACA":0,			"TAACT":0,			"TAACC":0,			"TAACG":0,			"TAAGA":0,			"TAAGT":0,			"TAAGC":1,			"TAAGG":0,
			"TATAA":3,			"TATAT":0,			"TATAC":0,			"TATAG":0,			"TATTA":1,			"TATTT":0,			"TATTC":1,			"TATTG":0,			"TATCA":0,			"TATCT":0,			"TATCC":0,			"TATCG":0,			"TATGA":0,			"TATGT":0,			"TATGC":0,			"TATGG":0,
			"TACAA":1,			"TACAT":2,			"TACAC":0,			"TACAG":0,			"TACTA":0,			"TACTT":0,			"TACTC":0,			"TACTG":0,			"TACCA":1,			"TACCT":0,			"TACCC":1,			"TACCG":0,			"TACGA":0,			"TACGT":0,			"TACGC":0,			"TACGG":0,
			"TAGAA":0,			"TAGAT":0,			"TAGAC":0,			"TAGAG":0,			"TAGTA":0,			"TAGTT":0,			"TAGTC":0,			"TAGTG":0,			"TAGCA":0,			"TAGCT":0,			"TAGCC":0,			"TAGCG":0,			"TAGGA":1,			"TAGGT":0,			"TAGGC":0,			"TAGGG":0,
			"TTAAA":2,			"TTAAT":1,			"TTAAC":0,			"TTAAG":0,			"TTATA":1,			"TTATT":0,			"TTATC":0,			"TTATG":0,			"TTACA":1,			"TTACT":0,			"TTACC":0,			"TTACG":0,			"TTAGA":0,			"TTAGT":0,			"TTAGC":0,			"TTAGG":0,
			"TTTAA":1,			"TTTAT":1,			"TTTAC":1,			"TTTAG":0,			"TTTTA":1,			"TTTTT":1,			"TTTTC":0,			"TTTTG":0,			"TTTCA":2,			"TTTCT":0,			"TTTCC":0,			"TTTCG":0,			"TTTGA":0,			"TTTGT":0,			"TTTGC":0,			"TTTGG":1,
			"TTCAA":1,			"TTCAT":1,			"TTCAC":0,			"TTCAG":1,			"TTCTA":0,			"TTCTT":0,			"TTCTC":0,			"TTCTG":0,			"TTCCA":0,			"TTCCT":2,			"TTCCC":0,			"TTCCG":0,			"TTCGA":0,			"TTCGT":0,			"TTCGC":0,			"TTCGG":0,
			"TTGAA":1,			"TTGAT":0,			"TTGAC":0,			"TTGAG":0,			"TTGTA":0,			"TTGTT":0,			"TTGTC":0,			"TTGTG":0,			"TTGCA":0,			"TTGCT":0,			"TTGCC":0,			"TTGCG":0,			"TTGGA":2,			"TTGGT":0,			"TTGGC":0,			"TTGGG":0,
			"TCAAA":2,			"TCAAT":0,			"TCAAC":0,			"TCAAG":0,			"TCATA":0,			"TCATT":1,			"TCATC":0,			"TCATG":0,			"TCACA":1,			"TCACT":0,			"TCACC":0,			"TCACG":0,			"TCAGA":0,			"TCAGT":0,			"TCAGC":0,			"TCAGG":1,
			"TCTAA":0,			"TCTAT":0,			"TCTAC":0,			"TCTAG":0,			"TCTTA":0,			"TCTTT":0,			"TCTTC":0,			"TCTTG":0,			"TCTCA":0,			"TCTCT":0,			"TCTCC":0,			"TCTCG":0,			"TCTGA":0,			"TCTGT":1,			"TCTGC":0,			"TCTGG":0,
			"TCCAA":0,			"TCCAT":0,			"TCCAC":0,			"TCCAG":0,			"TCCTA":0,			"TCCTT":0,			"TCCTC":0,			"TCCTG":2,			"TCCCA":0,			"TCCCT":0,			"TCCCC":0,			"TCCCG":0,			"TCCGA":0,			"TCCGT":0,			"TCCGC":0,			"TCCGG":0,
			"TCGAA":0,			"TCGAT":0,			"TCGAC":0,			"TCGAG":0,			"TCGTA":0,			"TCGTT":0,			"TCGTC":0,			"TCGTG":0,			"TCGCA":0,			"TCGCT":2,			"TCGCC":0,			"TCGCG":0,			"TCGGA":0,			"TCGGT":0,			"TCGGC":0,			"TCGGG":1,
			"TGAAA":2,			"TGAAT":0,			"TGAAC":0,			"TGAAG":0,			"TGATA":0,			"TGATT":0,			"TGATC":0,			"TGATG":0,			"TGACA":1,			"TGACT":0,			"TGACC":0,			"TGACG":0,			"TGAGA":0,			"TGAGT":0,			"TGAGC":1,			"TGAGG":0,
			"TGTAA":0,			"TGTAT":0,			"TGTAC":1,			"TGTAG":0,			"TGTTA":0,			"TGTTT":0,			"TGTTC":0,			"TGTTG":0,			"TGTCA":0,			"TGTCT":0,			"TGTCC":0,			"TGTCG":0,			"TGTGA":0,			"TGTGT":0,			"TGTGC":0,			"TGTGG":0,
			"TGCAA":1,			"TGCAT":0,			"TGCAC":1,			"TGCAG":0,			"TGCTA":0,			"TGCTT":0,			"TGCTC":0,			"TGCTG":0,			"TGCCA":0,			"TGCCT":0,			"TGCCC":0,			"TGCCG":0,			"TGCGA":0,			"TGCGT":0,			"TGCGC":0,			"TGCGG":0,
			"TGGAA":1,			"TGGAT":0,			"TGGAC":0,			"TGGAG":2,			"TGGTA":2,			"TGGTT":0,			"TGGTC":0,			"TGGTG":0,			"TGGCA":1,			"TGGCT":0,			"TGGCC":0,			"TGGCG":0,			"TGGGA":1,			"TGGGT":0,			"TGGGC":0,			"TGGGG":0,
			"CAAAA":2,			"CAAAT":2,			"CAAAC":0,			"CAAAG":2,			"CAATA":1,			"CAATT":0,			"CAATC":0,			"CAATG":0,			"CAACA":0,			"CAACT":0,			"CAACC":0,			"CAACG":0,			"CAAGA":0,			"CAAGT":1,			"CAAGC":0,			"CAAGG":0,
			"CATAA":0,			"CATAT":0,			"CATAC":0,			"CATAG":0,			"CATTA":1,			"CATTT":3,			"CATTC":0,			"CATTG":0,			"CATCA":2,			"CATCT":0,			"CATCC":0,			"CATCG":1,			"CATGA":0,			"CATGT":0,			"CATGC":0,			"CATGG":0,
			"CACAA":1,			"CACAT":1,			"CACAC":0,			"CACAG":0,			"CACTA":0,			"CACTT":0,			"CACTC":0,			"CACTG":0,			"CACCA":0,			"CACCT":1,			"CACCC":0,			"CACCG":0,			"CACGA":0,			"CACGT":0,			"CACGC":0,			"CACGG":0,
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			"CTAAA":0,			"CTAAT":0,			"CTAAC":0,			"CTAAG":0,			"CTATA":0,			"CTATT":0,			"CTATC":0,			"CTATG":0,			"CTACA":0,			"CTACT":0,			"CTACC":0,			"CTACG":0,			"CTAGA":0,			"CTAGT":0,			"CTAGC":0,			"CTAGG":0,
			"CTTAA":0,			"CTTAT":0,			"CTTAC":0,			"CTTAG":0,			"CTTTA":1,			"CTTTT":0,			"CTTTC":0,			"CTTTG":0,			"CTTCA":0,			"CTTCT":0,			"CTTCC":2,			"CTTCG":0,			"CTTGA":1,			"CTTGT":0,			"CTTGC":0,			"CTTGG":1,
			"CTCAA":0,			"CTCAT":0,			"CTCAC":0,			"CTCAG":0,			"CTCTA":0,			"CTCTT":0,			"CTCTC":0,			"CTCTG":1,			"CTCCA":0,			"CTCCT":0,			"CTCCC":0,			"CTCCG":0,			"CTCGA":0,			"CTCGT":0,			"CTCGC":0,			"CTCGG":0,
			"CTGAA":1,			"CTGAT":0,			"CTGAC":0,			"CTGAG":0,			"CTGTA":1,			"CTGTT":0,			"CTGTC":0,			"CTGTG":0,			"CTGCA":1,			"CTGCT":0,			"CTGCC":0,			"CTGCG":0,			"CTGGA":0,			"CTGGT":1,			"CTGGC":1,			"CTGGG":1,
			"CCAAA":0,			"CCAAT":1,			"CCAAC":0,			"CCAAG":0,			"CCATA":0,			"CCATT":0,			"CCATC":0,			"CCATG":0,			"CCACA":0,			"CCACT":0,			"CCACC":1,			"CCACG":0,			"CCAGA":1,			"CCAGT":0,			"CCAGC":0,			"CCAGG":1,
			"CCTAA":0,			"CCTAT":0,			"CCTAC":0,			"CCTAG":0,			"CCTTA":0,			"CCTTT":0,			"CCTTC":1,			"CCTTG":1,			"CCTCA":0,			"CCTCT":0,			"CCTCC":0,			"CCTCG":0,			"CCTGA":0,			"CCTGT":0,			"CCTGC":1,			"CCTGG":2,
			"CCCAA":0,			"CCCAT":0,			"CCCAC":1,			"CCCAG":2,			"CCCTA":0,			"CCCTT":0,			"CCCTC":0,			"CCCTG":0,			"CCCCA":0,			"CCCCT":0,			"CCCCC":0,			"CCCCG":0,			"CCCGA":0,			"CCCGT":0,			"CCCGC":0,			"CCCGG":0,
			"CCGAA":0,			"CCGAT":0,			"CCGAC":0,			"CCGAG":0,			"CCGTA":0,			"CCGTT":0,			"CCGTC":0,			"CCGTG":0,			"CCGCA":0,			"CCGCT":0,			"CCGCC":0,			"CCGCG":0,			"CCGGA":0,			"CCGGT":0,			"CCGGC":0,			"CCGGG":0,
			"CGAAA":0,			"CGAAT":0,			"CGAAC":0,			"CGAAG":0,			"CGATA":0,			"CGATT":0,			"CGATC":0,			"CGATG":0,			"CGACA":0,			"CGACT":0,			"CGACC":0,			"CGACG":0,			"CGAGA":0,			"CGAGT":0,			"CGAGC":0,			"CGAGG":0,
			"CGTAA":0,			"CGTAT":0,			"CGTAC":0,			"CGTAG":0,			"CGTTA":0,			"CGTTT":0,			"CGTTC":0,			"CGTTG":0,			"CGTCA":0,			"CGTCT":0,			"CGTCC":0,			"CGTCG":0,			"CGTGA":0,			"CGTGT":0,			"CGTGC":0,			"CGTGG":0,
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			"CGGAA":0,			"CGGAT":0,			"CGGAC":0,			"CGGAG":0,			"CGGTA":0,			"CGGTT":0,			"CGGTC":0,			"CGGTG":0,			"CGGCA":0,			"CGGCT":0,			"CGGCC":0,			"CGGCG":0,			"CGGGA":1,			"CGGGT":0,			"CGGGC":0,			"CGGGG":0,
			"GAAAA":1,			"GAAAT":2,			"GAAAC":0,			"GAAAG":1,			"GAATA":1,			"GAATT":0,			"GAATC":0,			"GAATG":0,			"GAACA":0,			"GAACT":0,			"GAACC":1,			"GAACG":0,			"GAAGA":0,			"GAAGT":0,			"GAAGC":0,			"GAAGG":1,
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			"GAGAA":1,			"GAGAT":0,			"GAGAC":0,			"GAGAG":1,			"GAGTA":1,			"GAGTT":0,			"GAGTC":0,			"GAGTG":0,			"GAGCA":1,			"GAGCT":0,			"GAGCC":1,			"GAGCG":0,			"GAGGA":0,			"GAGGT":1,			"GAGGC":1,			"GAGGG":0,
			"GTAAA":3,			"GTAAT":0,			"GTAAC":0,			"GTAAG":0,			"GTATA":1,			"GTATT":0,			"GTATC":0,			"GTATG":0,			"GTACA":1,			"GTACT":0,			"GTACC":2,			"GTACG":0,			"GTAGA":0,			"GTAGT":0,			"GTAGC":0,			"GTAGG":0,
			"GTTAA":0,			"GTTAT":0,			"GTTAC":0,			"GTTAG":0,			"GTTTA":0,			"GTTTT":0,			"GTTTC":0,			"GTTTG":0,			"GTTCA":0,			"GTTCT":0,			"GTTCC":0,			"GTTCG":0,			"GTTGA":0,			"GTTGT":0,			"GTTGC":0,			"GTTGG":0,
			"GTCAA":0,			"GTCAT":0,			"GTCAC":0,			"GTCAG":0,			"GTCTA":0,			"GTCTT":0,			"GTCTC":0,			"GTCTG":0,			"GTCCA":0,			"GTCCT":0,			"GTCCC":0,			"GTCCG":0,			"GTCGA":0,			"GTCGT":0,			"GTCGC":0,			"GTCGG":1,
			"GTGAA":0,			"GTGAT":0,			"GTGAC":1,			"GTGAG":1,			"GTGTA":0,			"GTGTT":0,			"GTGTC":0,			"GTGTG":0,			"GTGCA":0,			"GTGCT":0,			"GTGCC":0,			"GTGCG":0,			"GTGGA":0,			"GTGGT":1,			"GTGGC":0,			"GTGGG":0,
			"GCAAA":1,			"GCAAT":0,			"GCAAC":0,			"GCAAG":0,			"GCATA":0,			"GCATT":0,			"GCATC":1,			"GCATG":0,			"GCACA":1,			"GCACT":0,			"GCACC":0,			"GCACG":0,			"GCAGA":0,			"GCAGT":1,			"GCAGC":1,			"GCAGG":0,
			"GCTAA":0,			"GCTAT":0,			"GCTAC":0,			"GCTAG":0,			"GCTTA":0,			"GCTTT":1,			"GCTTC":1,			"GCTTG":1,			"GCTCA":0,			"GCTCT":0,			"GCTCC":0,			"GCTCG":0,			"GCTGA":1,			"GCTGT":0,			"GCTGC":0,			"GCTGG":1,
			"GCCAA":0,			"GCCAT":0,			"GCCAC":0,			"GCCAG":0,			"GCCTA":0,			"GCCTT":0,			"GCCTC":0,			"GCCTG":0,			"GCCCA":1,			"GCCCT":0,			"GCCCC":0,			"GCCCG":0,			"GCCGA":0,			"GCCGT":0,			"GCCGC":0,			"GCCGG":0,
			"GCGAA":0,			"GCGAT":0,			"GCGAC":0,			"GCGAG":0,			"GCGTA":0,			"GCGTT":0,			"GCGTC":0,			"GCGTG":0,			"GCGCA":0,			"GCGCT":0,			"GCGCC":0,			"GCGCG":0,			"GCGGA":0,			"GCGGT":0,			"GCGGC":0,			"GCGGG":0,
			"GGAAA":1,			"GGAAT":1,			"GGAAC":1,			"GGAAG":1,			"GGATA":0,			"GGATT":1,			"GGATC":0,			"GGATG":0,			"GGACA":0,			"GGACT":0,			"GGACC":0,			"GGACG":0,			"GGAGA":1,			"GGAGT":1,			"GGAGC":1,			"GGAGG":2,
			"GGTAA":2,			"GGTAT":1,			"GGTAC":1,			"GGTAG":0,			"GGTTA":0,			"GGTTT":0,			"GGTTC":0,			"GGTTG":0,			"GGTCA":0,			"GGTCT":0,			"GGTCC":0,			"GGTCG":1,			"GGTGA":0,			"GGTGT":0,			"GGTGC":0,			"GGTGG":0,
			"GGCAA":0,			"GGCAT":0,			"GGCAC":0,			"GGCAG":2,			"GGCTA":0,			"GGCTT":1,			"GGCTC":0,			"GGCTG":0,			"GGCCA":0,			"GGCCT":0,			"GGCCC":0,			"GGCCG":0,			"GGCGA":0,			"GGCGT":0,			"GGCGC":0,			"GGCGG":0,
			"GGGAA":2,			"GGGAT":0,			"GGGAC":0,			"GGGAG":0,			"GGGTA":1,			"GGGTT":0,			"GGGTC":0,			"GGGTG":0,			"GGGCA":0,			"GGGCT":0,			"GGGCC":0,			"GGGCG":0,			"GGGGA":0,			"GGGGT":1,			"GGGGC":0,			"GGGGG":0
		},
		"overrepresented_sequences": {
		}
	},
	"read1_after_filtering": {
		"total_reads": 2,
		"total_bases": 286,
		"q20_bases": 246,
		"q30_bases": 226,
		"total_cycles": 143,
		"quality_curves": {
			"A":[36,36,21,25,36,23,34,32,25,36,14,34,36,26.5,21,36,36,14,14,36,36,36,21,28.5,36,34,36,36,36,36,36,36,36,25,36,25,25,36,25,34,36,36,36,36,36,25,32,25,34,36,36,25,36,36,32,36,36,36,36,34,36,36,36,36,36,28.5,36,36,36,36,32,14,36,25,34,25,28.5,36,25,28.5,14,36,28.5,36,36,36,36,36,21,36,25,36,34,34,34,25,36,32,25,36,36,36,36,36,36,25,31.5,36,36,36,34,36,36,25,34,25,36,36,27,32,36,36,36,34,36,36,36,23,36,32,31.5,36,36,20.5,34,34,36,36,14,36,36,36,25],
			"T":[36,36,28.5,25,36,32,36,32,25,36,25,34,36,26.5,28.5,36,36,25,36,34,36,36,28.5,28.5,25,34,34,36,25,25,36,36,36,25,36,36,36,36,25,36,34,25,36,36,36,25,36,25,32,36,36,25,36,36,32,25,25,36,36,32,36,36,36,36,36,28.5,36,36,32,32,34,25,36,25,34,25,28.5,36,25,28.5,14,25,36,27,36,34,34,36,28.5,36,36,31.5,32,36,36,25,36,32,25,36,36,36,36,36,36,36,31.5,27,36,36,34,36,25,25,34,25,36,36,29.5,29.5,36,25,34,34,36,14,27,23,34,36,31.5,14,36,20.5,34,34,32,36,23,34,27,36,25],
			"C":[36,36,28.5,36,36,23,32,32,25,36,25,34,36,26.5,28.5,36,36,25,25,34,36,36,28.5,28.5,14,32,32,36,14,14,36,36,36,14,36,25,25,36,25,32,32,14,36,36,36,25,34,25,34,36,36,25,36,36,32,25,25,36,36,34,36,36,36,36,36,28.5,36,36,34,34,34,36,36,14,32,14,28.5,36,25,21,14,25,21,31.5,36,32,32,36,28.5,36,14,27,34,34,34,25,36,32,25,36,36,36,36,36,36,14,31.5,31.5,36,36,34,36,25,25,34,25,36,36,32,27,36,25,32,34,36,25,31.5,23,32,34,31.5,25,36,20.5,34,34,34,36,23,34,31.5,36,25],
			"G":[36,36,36,14,36,14,34,32,25,36,36,34,36,26.5,36,36,36,36,25,32,36,36,36,28.5,25,36,34,36,25,25,36,36,36,36,36,14,14,36,25,34,34,25,36,36,36,25,34,25,36,36,36,25,36,36,32,14,14,36,36,36,36,36,36,36,36,28.5,36,36,34,34,36,25,36,36,36,36,28.5,36,25,36,14,14,28.5,31.5,36,34,34,36,36,36,25,31.5,36,32,32,25,36,32,25,36,36,36,36,36,36,25,31.5,31.5,36,36,34,36,14,25,34,25,36,36,29.5,29.5,36,14,34,34,36,25,31.5,23,34,34,31.5,25,36,20.5,34,34,34,36,32,32,31.5,36,25],
			"mean":[36,36,28.5,25,36,23,34,32,25,36,25,34,36,26.5,28.5,36,36,25,25,34,36,36,28.5,28.5,25,34,34,36,25,25,36,36,36,25,36,25,25,36,25,34,34,25,36,36,36,25,34,25,34,36,36,25,36,36,32,25,25,36,36,34,36,36,36,36,36,28.5,36,36,34,34,34,25,36,25,34,25,28.5,36,25,28.5,14,25,28.5,31.5,36,34,34,36,28.5,36,25,31.5,34,34,34,25,36,32,25,36,36,36,36,36,36,25,31.5,31.5,36,36,34,36,25,25,34,25,36,36,29.5,29.5,36,25,34,34,36,25,31.5,23,34,34,31.5,25,36,20.5,34,34,34,36,23,34,31.5,36,25]
		},
		"content_curves": {
			"A":[0,0,0.5,0,1,0,0,0.5,0,0,0.5,1,0.5,1,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,0.5,0.5,0.5,0,0,0,0,0,0,0,1,0,0.5,0.5,1,0.5,0.5,0,0.5,0,0,0.5,0.5,1,0.5,0,0.5,0.5,0.5,0,0.5,0,0,0,1,1,1,0,0.5,0,0.5,0.5,0.5,0.5,0.5,0,0,0,1,0.5,0,0,0.5,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,0,0,0.5,0,0,0,1,0,1,0,0,0.5,0,0.5,1,0,0,1,0.5,0.5,0.5,1,1,0.5,0,0,0,0.5,1,0.5,0.5,0,0.5,0.5,1,1,0.5,0.5,0,0.5,0.5,0,0.5,0.5,1,0,1,0.5,0.5,0.5,0.5,0.5,0.5,0],
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		"kmer_count": {
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			"CTAAA":0,			"CTAAT":0,			"CTAAC":0,			"CTAAG":0,			"CTATA":0,			"CTATT":0,			"CTATC":0,			"CTATG":0,			"CTACA":0,			"CTACT":0,			"CTACC":0,			"CTACG":0,			"CTAGA":0,			"CTAGT":0,			"CTAGC":0,			"CTAGG":0,
			"CTTAA":0,			"CTTAT":0,			"CTTAC":0,			"CTTAG":0,			"CTTTA":1,			"CTTTT":0,			"CTTTC":0,			"CTTTG":0,			"CTTCA":0,			"CTTCT":0,			"CTTCC":2,			"CTTCG":0,			"CTTGA":1,			"CTTGT":0,			"CTTGC":0,			"CTTGG":0,
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			"CCAAA":0,			"CCAAT":1,			"CCAAC":0,			"CCAAG":0,			"CCATA":0,			"CCATT":0,			"CCATC":0,			"CCATG":0,			"CCACA":0,			"CCACT":0,			"CCACC":1,			"CCACG":0,			"CCAGA":1,			"CCAGT":0,			"CCAGC":0,			"CCAGG":1,
			"CCTAA":0,			"CCTAT":0,			"CCTAC":0,			"CCTAG":0,			"CCTTA":0,			"CCTTT":0,			"CCTTC":1,			"CCTTG":1,			"CCTCA":0,			"CCTCT":0,			"CCTCC":0,			"CCTCG":0,			"CCTGA":0,			"CCTGT":0,			"CCTGC":1,			"CCTGG":2,
			"CCCAA":0,			"CCCAT":0,			"CCCAC":1,			"CCCAG":2,			"CCCTA":0,			"CCCTT":0,			"CCCTC":0,			"CCCTG":0,			"CCCCA":0,			"CCCCT":0,			"CCCCC":0,			"CCCCG":0,			"CCCGA":0,			"CCCGT":0,			"CCCGC":0,			"CCCGG":0,
			"CCGAA":0,			"CCGAT":0,			"CCGAC":0,			"CCGAG":0,			"CCGTA":0,			"CCGTT":0,			"CCGTC":0,			"CCGTG":0,			"CCGCA":0,			"CCGCT":0,			"CCGCC":0,			"CCGCG":0,			"CCGGA":0,			"CCGGT":0,			"CCGGC":0,			"CCGGG":0,
			"CGAAA":0,			"CGAAT":0,			"CGAAC":0,			"CGAAG":0,			"CGATA":0,			"CGATT":0,			"CGATC":0,			"CGATG":0,			"CGACA":0,			"CGACT":0,			"CGACC":0,			"CGACG":0,			"CGAGA":0,			"CGAGT":0,			"CGAGC":0,			"CGAGG":0,
			"CGTAA":0,			"CGTAT":0,			"CGTAC":0,			"CGTAG":0,			"CGTTA":0,			"CGTTT":0,			"CGTTC":0,			"CGTTG":0,			"CGTCA":0,			"CGTCT":0,			"CGTCC":0,			"CGTCG":0,			"CGTGA":0,			"CGTGT":0,			"CGTGC":0,			"CGTGG":0,
			"CGCAA":0,			"CGCAT":0,			"CGCAC":0,			"CGCAG":0,			"CGCTA":0,			"CGCTT":1,			"CGCTC":0,			"CGCTG":1,			"CGCCA":0,			"CGCCT":0,			"CGCCC":0,			"CGCCG":0,			"CGCGA":0,			"CGCGT":0,			"CGCGC":0,			"CGCGG":0,
			"CGGAA":0,			"CGGAT":0,			"CGGAC":0,			"CGGAG":0,			"CGGTA":0,			"CGGTT":0,			"CGGTC":0,			"CGGTG":0,			"CGGCA":0,			"CGGCT":0,			"CGGCC":0,			"CGGCG":0,			"CGGGA":1,			"CGGGT":0,			"CGGGC":0,			"CGGGG":0,
			"GAAAA":1,			"GAAAT":2,			"GAAAC":0,			"GAAAG":1,			"GAATA":1,			"GAATT":0,			"GAATC":0,			"GAATG":0,			"GAACA":0,			"GAACT":0,			"GAACC":1,			"GAACG":0,			"GAAGA":0,			"GAAGT":0,			"GAAGC":0,			"GAAGG":1,
			"GATAA":0,			"GATAT":0,			"GATAC":0,			"GATAG":0,			"GATTA":0,			"GATTT":0,			"GATTC":0,			"GATTG":0,			"GATCA":0,			"GATCT":0,			"GATCC":0,			"GATCG":0,			"GATGA":0,			"GATGT":0,			"GATGC":0,			"GATGG":0,
			"GACAA":0,			"GACAT":2,			"GACAC":0,			"GACAG":0,			"GACTA":0,			"GACTT":0,			"GACTC":0,			"GACTG":0,			"GACCA":0,			"GACCT":0,			"GACCC":0,			"GACCG":0,			"GACGA":0,			"GACGT":0,			"GACGC":0,			"GACGG":0,
			"GAGAA":1,			"GAGAT":0,			"GAGAC":0,			"GAGAG":1,			"GAGTA":1,			"GAGTT":0,			"GAGTC":0,			"GAGTG":0,			"GAGCA":1,			"GAGCT":0,			"GAGCC":1,			"GAGCG":0,			"GAGGA":0,			"GAGGT":1,			"GAGGC":0,			"GAGGG":0,
			"GTAAA":3,			"GTAAT":0,			"GTAAC":0,			"GTAAG":0,			"GTATA":1,			"GTATT":0,			"GTATC":0,			"GTATG":0,			"GTACA":1,			"GTACT":0,			"GTACC":2,			"GTACG":0,			"GTAGA":0,			"GTAGT":0,			"GTAGC":0,			"GTAGG":0,
			"GTTAA":0,			"GTTAT":0,			"GTTAC":0,			"GTTAG":0,			"GTTTA":0,			"GTTTT":0,			"GTTTC":0,			"GTTTG":0,			"GTTCA":0,			"GTTCT":0,			"GTTCC":0,			"GTTCG":0,			"GTTGA":0,			"GTTGT":0,			"GTTGC":0,			"GTTGG":0,
			"GTCAA":0,			"GTCAT":0,			"GTCAC":0,			"GTCAG":0,			"GTCTA":0,			"GTCTT":0,			"GTCTC":0,			"GTCTG":0,			"GTCCA":0,			"GTCCT":0,			"GTCCC":0,			"GTCCG":0,			"GTCGA":0,			"GTCGT":0,			"GTCGC":0,			"GTCGG":1,
			"GTGAA":0,			"GTGAT":0,			"GTGAC":1,			"GTGAG":1,			"GTGTA":0,			"GTGTT":0,			"GTGTC":0,			"GTGTG":0,			"GTGCA":0,			"GTGCT":0,			"GTGCC":0,			"GTGCG":0,			"GTGGA":0,			"GTGGT":1,			"GTGGC":0,			"GTGGG":0,
			"GCAAA":1,			"GCAAT":0,			"GCAAC":0,			"GCAAG":0,			"GCATA":0,			"GCATT":0,			"GCATC":1,			"GCATG":0,			"GCACA":1,			"GCACT":0,			"GCACC":0,			"GCACG":0,			"GCAGA":0,			"GCAGT":1,			"GCAGC":1,			"GCAGG":0,
			"GCTAA":0,			"GCTAT":0,			"GCTAC":0,			"GCTAG":0,			"GCTTA":0,			"GCTTT":1,			"GCTTC":1,			"GCTTG":0,			"GCTCA":0,			"GCTCT":0,			"GCTCC":0,			"GCTCG":0,			"GCTGA":1,			"GCTGT":0,			"GCTGC":0,			"GCTGG":1,
			"GCCAA":0,			"GCCAT":0,			"GCCAC":0,			"GCCAG":0,			"GCCTA":0,			"GCCTT":0,			"GCCTC":0,			"GCCTG":0,			"GCCCA":1,			"GCCCT":0,			"GCCCC":0,			"GCCCG":0,			"GCCGA":0,			"GCCGT":0,			"GCCGC":0,			"GCCGG":0,
			"GCGAA":0,			"GCGAT":0,			"GCGAC":0,			"GCGAG":0,			"GCGTA":0,			"GCGTT":0,			"GCGTC":0,			"GCGTG":0,			"GCGCA":0,			"GCGCT":0,			"GCGCC":0,			"GCGCG":0,			"GCGGA":0,			"GCGGT":0,			"GCGGC":0,			"GCGGG":0,
			"GGAAA":1,			"GGAAT":1,			"GGAAC":1,			"GGAAG":1,			"GGATA":0,			"GGATT":1,			"GGATC":0,			"GGATG":0,			"GGACA":0,			"GGACT":0,			"GGACC":0,			"GGACG":0,			"GGAGA":1,			"GGAGT":1,			"GGAGC":1,			"GGAGG":1,
			"GGTAA":2,			"GGTAT":1,			"GGTAC":1,			"GGTAG":0,			"GGTTA":0,			"GGTTT":0,			"GGTTC":0,			"GGTTG":0,			"GGTCA":0,			"GGTCT":0,			"GGTCC":0,			"GGTCG":1,			"GGTGA":0,			"GGTGT":0,			"GGTGC":0,			"GGTGG":0,
			"GGCAA":0,			"GGCAT":0,			"GGCAC":0,			"GGCAG":2,			"GGCTA":0,			"GGCTT":0,			"GGCTC":0,			"GGCTG":0,			"GGCCA":0,			"GGCCT":0,			"GGCCC":0,			"GGCCG":0,			"GGCGA":0,			"GGCGT":0,			"GGCGC":0,			"GGCGG":0,
			"GGGAA":2,			"GGGAT":0,			"GGGAC":0,			"GGGAG":0,			"GGGTA":1,			"GGGTT":0,			"GGGTC":0,			"GGGTG":0,			"GGGCA":0,			"GGGCT":0,			"GGGCC":0,			"GGGCG":0,			"GGGGA":0,			"GGGGT":1,			"GGGGC":0,			"GGGGG":0
		},
		"overrepresented_sequences": {
		}
	},
	"command": "fastp --thread 1 --report_title fastp report for R1_fq.fastq -i R1_fq.fastq -o first.fastq -U --umi_loc read1 --umi_len 8 "
}