Mercurial > repos > iuc > multiqc
changeset 12:1c2db0054039 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 761a954744119f6317afe28eb50bd4f3fdea4984
| author | iuc |
|---|---|
| date | Wed, 08 Aug 2018 08:49:39 -0400 |
| parents | f0ec41881020 |
| children | 161f4383df15 |
| files | multiqc.xml test-data/aligner_soft_stats.tabular test-data/fastp1.json.txt test-data/fastp2.json.txt test-data/fastp_stats.tabular test-data/post_aligner_soft_stats.tabular test-data/pre_alignment_soft_stats.tabular |
| diffstat | 7 files changed, 686 insertions(+), 32 deletions(-) [+] |
line wrap: on
line diff
--- a/multiqc.xml Mon Aug 06 10:42:11 2018 -0400 +++ b/multiqc.xml Wed Aug 08 08:49:39 2018 -0400 @@ -1,7 +1,7 @@ -<tool id="multiqc" name="MultiQC" version="@WRAPPER_VERSION@.2"> +<tool id="multiqc" name="MultiQC" version="@WRAPPER_VERSION@"> <description>aggregate results from bioinformatics analyses into a single report</description> <macros> - <token name="@WRAPPER_VERSION@">1.5</token> + <token name="@WRAPPER_VERSION@">1.6</token> <token name="@ESCAPE_IDENTIFIER@"> <![CDATA[ #set identifier = re.sub('[^\s\w\-]', '_', str($file.element_identifier)) @@ -156,6 +156,14 @@ @LN_2_FILES@ #end if #end for + #elif str($repeat.software_cond.software) == "fastp" + #set $pattern = "report_title" + #for $file in $repeat.software_cond.input + @ESCAPE_IDENTIFIER@ + #set file_path = os.path.join($software_dir, str($identifier) + 'fastp.json') + ln -s '$file' '$file_path' && + grep -q "$pattern" '$file_path' || die "'$pattern' or 'report_title' not found in the file" && + #end for #elif str($repeat.software_cond.software) == "fastqc" #for $j, $repeat2 in enumerate( $repeat.software_cond.output ) @CREATE_REPEAT_DIR_1@ @@ -499,6 +507,7 @@ <option value="deeptools">deepTools</option> <!--<option value="disambiguate">Disambiguate</option>--> <!--<option value="fastq_screen">FastQ Screen</option>--> + <option value="fastp">fastp</option> <option value="fastqc">FastQC</option> <option value="featureCounts">featureCounts</option> <option value="flexbar">Flexbar</option> @@ -584,6 +593,9 @@ <param name="input" type="data" format="txt" multiple="true" label="Bismark output"/> </repeat> </when> + <when value="fastp"> + <param name="input" type="data" format="json" multiple="true" label="Output of fastp" help="It should be the json report from fastp containing 'report_title'"/> + </when> <when value="fastqc"> <repeat name="output" title="FastQC output" min="1"> <param name="type" type="select" label="Type of FastQC output?"> @@ -813,6 +825,12 @@ </repeat> <repeat name="results"> <conditional name="software_cond"> + <param name="software" value="fastp" /> + <param name="input" value="fastp1.json.txt,fastp2.json.txt" /> + </conditional> + </repeat> + <repeat name="results"> + <conditional name="software_cond"> <param name="software" value="fastqc" /> <repeat name="output"> <param name="type" value="data"/> @@ -846,6 +864,7 @@ <has_text text="Title of the report" /> <has_text text="Commment for the report" /> <has_text text="cutadapt_plot" /> + <has_text text="An ultra-fast all-in-one FASTQ preprocessor" /> <has_text text="fastqc_seq_heatmap_key_t" /> <has_text text="flexbar_plot" /> <has_text text="sortmerna-detailed-plot" /> @@ -855,6 +874,7 @@ <output name="log" file="pre_alignment_soft_log.txt" compare="sim_size"/> <output_collection name="stats" type="list"> <element name="cutadapt" file="cutadapt_stats.tabular" compare="sim_size" delta="10"/> + <element name="fastp" file="fastp_stats.tabular" compare="sim_size" delta="10"/> <element name="fastqc" file="fastqc_stats.tabular" compare="sim_size" delta="10"/> <element name="flexbar" file="flexbar_stats.tabular" compare="sim_size" delta="10"/> <element name="general_stats" file="pre_alignment_soft_stats.tabular" compare="sim_size" delta="30"/>
--- a/test-data/aligner_soft_stats.tabular Mon Aug 06 10:42:11 2018 -0400 +++ b/test-data/aligner_soft_stats.tabular Wed Aug 08 08:49:39 2018 -0400 @@ -1,4 +1,4 @@ -Sample Cutadapt_mqc-generalstats-percent_trimmed Kallisto_mqc-generalstats-fragment_length Kallisto_mqc-generalstats-percent_aligned Kallisto_mqc-generalstats-pseudoaligned_reads Bismark_mqc-generalstats-aligned_reads Bismark_mqc-generalstats-percent_aligned Bowtie 2_mqc-generalstats-overall_alignment_rate HiCExplorer_mqc-generalstats-Pairs_considered HiCExplorer_mqc-generalstats-Pairs_used HiCExplorer_mqc-generalstats-Mapped HiCExplorer_mqc-generalstats-Min_rest_site_distance HiCExplorer_mqc-generalstats-Max_rest_site_distance HISAT2_mqc-generalstats-overall_alignment_rate STAR_mqc-generalstats-uniquely_mapped_percent STAR_mqc-generalstats-uniquely_mapped Tophat_mqc-generalstats-overall_aligned_percent Tophat_mqc-generalstats-aligned_not_multimapped_discordant MACS2_mqc-generalstats-d MACS2_mqc-generalstats-treatment_redundant_rate MACS2_mqc-generalstats-control_redundant_rate +Sample Cutadapt_mqc-generalstats-cutadapt-percent_trimmed Kallisto_mqc-generalstats-kallisto-fragment_length Kallisto_mqc-generalstats-kallisto-percent_aligned Kallisto_mqc-generalstats-kallisto-pseudoaligned_reads Bismark_mqc-generalstats-bismark-aligned_reads Bismark_mqc-generalstats-bismark-percent_aligned Bowtie 2_mqc-generalstats-bowtie_2-overall_alignment_rate HiCExplorer_mqc-generalstats-hicexplorer-Pairs_considered HiCExplorer_mqc-generalstats-hicexplorer-Pairs_used HiCExplorer_mqc-generalstats-hicexplorer-Mapped HiCExplorer_mqc-generalstats-hicexplorer-Min_rest_site_distance HiCExplorer_mqc-generalstats-hicexplorer-Max_rest_site_distance HISAT2_mqc-generalstats-hisat2-overall_alignment_rate STAR_mqc-generalstats-star-uniquely_mapped_percent STAR_mqc-generalstats-star-uniquely_mapped Tophat_mqc-generalstats-tophat-overall_aligned_percent Tophat_mqc-generalstats-tophat-aligned_not_multimapped_discordant MACS2_mqc-generalstats-macs2-d MACS2_mqc-generalstats-macs2-treatment_redundant_rate MACS2_mqc-generalstats-macs2-control_redundant_rate HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1 5.880883098970165 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1_val_1 167.866 83.65114569077758 48531088.0 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R2 31.038195169381073
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/fastp1.json.txt Wed Aug 08 08:49:39 2018 -0400 @@ -0,0 +1,217 @@ +{ + "summary": { + "before_filtering": { + "total_reads":2, + "total_bases":302, + "q20_bases":262, + "q30_bases":241, + "q20_rate":0.86755, + "q30_rate":0.798013, + "read1_mean_length":151, + "gc_content":0.36755 + }, + "after_filtering": { + "total_reads":2, + "total_bases":286, + "q20_bases":246, + "q30_bases":226, + "q20_rate":0.86014, + "q30_rate":0.79021, + "read1_mean_length":143, + "gc_content":0.367133 + } + }, + "filtering_result": { + "passed_filter_reads": 2, + "low_quality_reads": 0, + "too_many_N_reads": 0, + "too_short_reads": 0, + "too_long_reads": 0 + }, + "duplication": { + "rate": 0, + "histogram": [2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0], + "mean_gc": [0.407843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] + }, + "read1_before_filtering": { + "total_reads": 2, + "total_bases": 302, + "q20_bases": 262, + "q30_bases": 241, + "total_cycles": 151, + "quality_curves": { + "A":[26.5,32,32,32,32,36,36,36,36,36,21,25,36,23,34,32,25,36,14,34,36,26.5,21,36,36,14,14,36,36,36,21,28.5,36,34,36,36,36,36,36,36,36,25,36,25,25,36,25,34,36,36,36,36,36,25,32,25,34,36,36,25,36,36,32,36,36,36,36,34,36,36,36,36,36,28.5,36,36,36,36,32,14,36,25,34,25,28.5,36,25,28.5,14,36,28.5,36,36,36,36,36,21,36,25,36,34,34,34,25,36,32,25,36,36,36,36,36,36,25,31.5,36,36,36,34,36,36,25,34,25,36,36,27,32,36,36,36,34,36,36,36,23,36,32,31.5,36,36,20.5,34,34,36,36,14,36,36,36,25], + "T":[26.5,32,32,32,32,34,36,36,36,36,28.5,25,36,32,36,32,25,36,25,34,36,26.5,28.5,36,36,25,36,34,36,36,28.5,28.5,25,34,34,36,25,25,36,36,36,25,36,36,36,36,25,36,34,25,36,36,36,25,36,25,32,36,36,25,36,36,32,25,25,36,36,32,36,36,36,36,36,28.5,36,36,32,32,34,25,36,25,34,25,28.5,36,25,28.5,14,25,36,27,36,34,34,36,28.5,36,36,31.5,32,36,36,25,36,32,25,36,36,36,36,36,36,36,31.5,27,36,36,34,36,25,25,34,25,36,36,29.5,29.5,36,25,34,34,36,14,27,23,34,36,31.5,14,36,20.5,34,34,32,36,23,34,27,36,25], + "C":[26.5,32,32,32,32,34,36,36,36,36,28.5,36,36,23,32,32,25,36,25,34,36,26.5,28.5,36,36,25,25,34,36,36,28.5,28.5,14,32,32,36,14,14,36,36,36,14,36,25,25,36,25,32,32,14,36,36,36,25,34,25,34,36,36,25,36,36,32,25,25,36,36,34,36,36,36,36,36,28.5,36,36,34,34,34,36,36,14,32,14,28.5,36,25,21,14,25,21,31.5,36,32,32,36,28.5,36,14,27,34,34,34,25,36,32,25,36,36,36,36,36,36,14,31.5,31.5,36,36,34,36,25,25,34,25,36,36,32,27,36,25,32,34,36,25,31.5,23,32,34,31.5,25,36,20.5,34,34,34,36,23,34,31.5,36,25], + "G":[26.5,32,32,32,32,32,36,36,36,36,36,14,36,14,34,32,25,36,36,34,36,26.5,36,36,36,36,25,32,36,36,36,28.5,25,36,34,36,25,25,36,36,36,36,36,14,14,36,25,34,34,25,36,36,36,25,34,25,36,36,36,25,36,36,32,14,14,36,36,36,36,36,36,36,36,28.5,36,36,34,34,36,25,36,36,36,36,28.5,36,25,36,14,14,28.5,31.5,36,34,34,36,36,36,25,31.5,36,32,32,25,36,32,25,36,36,36,36,36,36,25,31.5,31.5,36,36,34,36,14,25,34,25,36,36,29.5,29.5,36,14,34,34,36,25,31.5,23,34,34,31.5,25,36,20.5,34,34,34,36,32,32,31.5,36,25], + "mean":[26.5,32,32,32,32,34,36,36,36,36,28.5,25,36,23,34,32,25,36,25,34,36,26.5,28.5,36,36,25,25,34,36,36,28.5,28.5,25,34,34,36,25,25,36,36,36,25,36,25,25,36,25,34,34,25,36,36,36,25,34,25,34,36,36,25,36,36,32,25,25,36,36,34,36,36,36,36,36,28.5,36,36,34,34,34,25,36,25,34,25,28.5,36,25,28.5,14,25,28.5,31.5,36,34,34,36,28.5,36,25,31.5,34,34,34,25,36,32,25,36,36,36,36,36,36,25,31.5,31.5,36,36,34,36,25,25,34,25,36,36,29.5,29.5,36,25,34,34,36,25,31.5,23,34,34,31.5,25,36,20.5,34,34,34,36,23,34,31.5,36,25] + }, + "content_curves": { + "A":[0,1,0,0.5,1,0.5,0.5,0,0,0,0.5,0,1,0,0,0.5,0,0,0.5,1,0.5,1,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,0.5,0.5,0.5,0,0,0,0,0,0,0,1,0,0.5,0.5,1,0.5,0.5,0,0.5,0,0,0.5,0.5,1,0.5,0,0.5,0.5,0.5,0,0.5,0,0,0,1,1,1,0,0.5,0,0.5,0.5,0.5,0.5,0.5,0,0,0,1,0.5,0,0,0.5,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,0,0,0.5,0,0,0,1,0,1,0,0,0.5,0,0.5,1,0,0,1,0.5,0.5,0.5,1,1,0.5,0,0,0,0.5,1,0.5,0.5,0,0.5,0.5,1,1,0.5,0.5,0,0.5,0.5,0,0.5,0.5,1,0,1,0.5,0.5,0.5,0.5,0.5,0.5,0], + "T":[1,0,0,0,0,0,0,0.5,0.5,0.5,0,0,0,0.5,0.5,0,0,0.5,0,0,0.5,0,0,0.5,0,0,0.5,0,0.5,0,0,0,0,0,0,0,0,0,0.5,1,0,0,0.5,0.5,0.5,1,0,0.5,0,0,0,0,0,0,0.5,1,0.5,0.5,0,0,0,0,0,0,0,1,0,0.5,0.5,0,0,0,0,1,0.5,1,0.5,0.5,0,0,0.5,0,0,0,0,0,0,0,0.5,0,0.5,0.5,0.5,0,0,0.5,0,0,0.5,0,0.5,0.5,0.5,0,0,0,1,0.5,0.5,0,0,0,0,0.5,0,0.5,0,0,0,0,0,1,0,0,0.5,0,0,0,1,0,0,0,0,0.5,0.5,1,0,0.5,1,0.5,0.5,0,0,0,0.5,0.5,0,0,0.5,0.5,1], + "C":[0,0,0.5,0,0,0,0,0.5,0,0.5,0,0.5,0,0,0.5,0,1,0.5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5,0.5,0.5,0,0.5,0.5,0,0,1,0.5,0.5,0,0,0,0,0.5,0.5,0.5,0,0,0.5,1,0,0,0,0,0.5,0,0,0,0,0,0,0,0.5,0,0,0.5,0,0,0,0,0,0,0,0,0,0.5,0,0.5,0.5,0.5,0,0,0,0.5,0,0,0.5,0,0,0.5,0.5,0,0,0.5,0.5,0.5,0,0,0,0,1,0,0,0.5,0,0.5,0,0,0,0.5,0,0,0.5,0.5,0,0,0,0,0,0,0,0,0.5,0.5,0,0,0.5,0,0,0,0,0,0.5,0,0,0,0,0,1,0,0,0,0,0,0,0,0], + "G":[0,0,0.5,0.5,0,0.5,0.5,0,0.5,0,0.5,0.5,0,0.5,0,0.5,0,0,0.5,0,0,0,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,1,0,0.5,0,0.5,0,0,0,0,0,0.5,0,0.5,0.5,0,0,0,0,0,0,0.5,0,0,0,0,0.5,0,0,0,0.5,1,0.5,0.5,0.5,0,0,0.5,0.5,0.5,0,0,0,0,0,0,0,0,0.5,0,0,0.5,0.5,0.5,0,0.5,1,0.5,0,0.5,0,0,0,0,0,0,0.5,0.5,0,0,0.5,0.5,0.5,0,0,0,0,0,0,0.5,0.5,0,1,0,0,0,0,0,0,0,0.5,0,1,1,0,0,0,0,0,0.5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5,0.5,0,0,0], + "N":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0], + "GC":[0,0,1,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,1,0,0.5,0.5,0.5,1,0.5,0.5,0,0,0,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,1,0.5,1,0.5,0.5,0.5,0.5,0,0,1,1,0.5,0.5,0.5,0,0,0.5,0.5,0.5,0,0.5,0.5,1,0,0,0.5,0,0.5,0,0.5,1,0.5,0.5,0.5,0,0.5,0.5,0.5,1,0,0,0,0,0,0,0,0,0.5,0.5,0,1,1,1,0,0.5,1,1,0,0.5,0.5,0,0,0.5,0.5,0,0.5,1,0.5,0.5,0.5,0.5,0.5,0,1,0,0,0.5,0,1,0.5,0,1,0.5,0,0,0.5,0.5,0,0,0.5,0,1,1,0,0,0.5,0.5,0,0.5,0.5,0,0,0,0,0,0.5,0,0,0,0,0,1,0,0,0,0.5,0.5,0,0,0] + }, + "kmer_count": { + "AAAAA":2, "AAAAT":3, "AAAAC":2, "AAAAG":1, "AAATA":3, "AAATT":2, "AAATC":1, "AAATG":2, "AAACA":2, "AAACT":1, "AAACC":2, "AAACG":0, "AAAGA":0, "AAAGT":2, "AAAGC":0, "AAAGG":4, + "AATAA":3, "AATAT":4, "AATAC":0, "AATAG":0, "AATTA":0, "AATTT":2, "AATTC":0, "AATTG":0, "AATCA":0, "AATCT":0, "AATCC":0, "AATCG":1, "AATGA":0, "AATGT":0, "AATGC":1, "AATGG":1, + "AACAA":2, "AACAT":0, "AACAC":0, "AACAG":0, "AACTA":0, "AACTT":0, "AACTC":1, "AACTG":0, "AACCA":0, "AACCT":2, "AACCC":1, "AACCG":0, "AACGA":0, "AACGT":0, "AACGC":0, "AACGG":0, + "AAGAA":0, "AAGAT":0, "AAGAC":0, "AAGAG":0, "AAGTA":1, "AAGTT":0, "AAGTC":0, "AAGTG":2, "AAGCA":0, "AAGCT":1, "AAGCC":0, "AAGCG":0, "AAGGA":3, "AAGGT":1, "AAGGC":0, "AAGGG":1, + "ATAAA":4, "ATAAT":1, "ATAAC":0, "ATAAG":1, "ATATA":1, "ATATT":2, "ATATC":0, "ATATG":0, "ATACA":0, "ATACT":0, "ATACC":0, "ATACG":0, "ATAGA":0, "ATAGT":0, "ATAGC":0, "ATAGG":0, + "ATTAA":2, "ATTAT":0, "ATTAC":0, "ATTAG":0, "ATTTA":1, "ATTTT":1, "ATTTC":2, "ATTTG":1, "ATTCA":1, "ATTCT":0, "ATTCC":0, "ATTCG":0, "ATTGA":0, "ATTGT":0, "ATTGC":0, "ATTGG":0, + "ATCAA":1, "ATCAT":0, "ATCAC":1, "ATCAG":0, "ATCTA":0, "ATCTT":0, "ATCTC":0, "ATCTG":0, "ATCCA":0, "ATCCT":0, "ATCCC":0, "ATCCG":0, "ATCGA":0, "ATCGT":0, "ATCGC":2, "ATCGG":0, + "ATGAA":0, "ATGAT":0, "ATGAC":0, "ATGAG":0, "ATGTA":0, "ATGTT":0, "ATGTC":0, "ATGTG":0, "ATGCA":1, "ATGCT":0, "ATGCC":0, "ATGCG":0, "ATGGA":1, "ATGGT":0, "ATGGC":0, "ATGGG":0, + "ACAAA":3, "ACAAT":0, "ACAAC":0, "ACAAG":1, "ACATA":0, "ACATT":3, "ACATC":2, "ACATG":0, "ACACA":0, "ACACT":0, "ACACC":0, "ACACG":0, "ACAGA":0, "ACAGT":0, "ACAGC":0, "ACAGG":0, + "ACTAA":0, "ACTAT":0, "ACTAC":0, "ACTAG":0, "ACTTA":0, "ACTTT":0, "ACTTC":0, "ACTTG":0, "ACTCA":0, "ACTCT":1, "ACTCC":0, "ACTCG":0, "ACTGA":0, "ACTGT":0, "ACTGC":0, "ACTGG":0, + "ACCAA":1, "ACCAT":0, "ACCAC":0, "ACCAG":0, "ACCTA":0, "ACCTT":2, "ACCTC":0, "ACCTG":1, "ACCCA":2, "ACCCT":0, "ACCCC":0, "ACCCG":0, "ACCGA":0, "ACCGT":0, "ACCGC":0, "ACCGG":0, + "ACGAA":0, "ACGAT":0, "ACGAC":0, "ACGAG":0, "ACGTA":0, "ACGTT":0, "ACGTC":0, "ACGTG":0, "ACGCA":0, "ACGCT":0, "ACGCC":0, "ACGCG":0, "ACGGA":0, "ACGGT":0, "ACGGC":0, "ACGGG":0, + "AGAAA":1, "AGAAT":0, "AGAAC":0, "AGAAG":0, "AGATA":0, "AGATT":0, "AGATC":0, "AGATG":0, "AGACA":1, "AGACT":0, "AGACC":0, "AGACG":0, "AGAGA":1, "AGAGT":0, "AGAGC":0, "AGAGG":0, + "AGTAA":1, "AGTAT":0, "AGTAC":1, "AGTAG":0, "AGTTA":0, "AGTTT":0, "AGTTC":0, "AGTTG":0, "AGTCA":0, "AGTCT":0, "AGTCC":0, "AGTCG":0, "AGTGA":2, "AGTGT":0, "AGTGC":0, "AGTGG":1, + "AGCAA":0, "AGCAT":1, "AGCAC":0, "AGCAG":0, "AGCTA":0, "AGCTT":1, "AGCTC":0, "AGCTG":1, "AGCCA":0, "AGCCT":0, "AGCCC":1, "AGCCG":0, "AGCGA":0, "AGCGT":0, "AGCGC":0, "AGCGG":0, + "AGGAA":1, "AGGAT":1, "AGGAC":0, "AGGAG":3, "AGGTA":1, "AGGTT":0, "AGGTC":1, "AGGTG":0, "AGGCA":1, "AGGCT":1, "AGGCC":0, "AGGCG":0, "AGGGA":0, "AGGGT":0, "AGGGC":0, "AGGGG":1, + "TAAAA":3, "TAAAT":1, "TAAAC":3, "TAAAG":2, "TAATA":2, "TAATT":0, "TAATC":0, "TAATG":0, "TAACA":0, "TAACT":0, "TAACC":0, "TAACG":0, "TAAGA":0, "TAAGT":0, "TAAGC":1, "TAAGG":0, + "TATAA":3, "TATAT":0, "TATAC":0, "TATAG":0, "TATTA":1, "TATTT":0, "TATTC":1, "TATTG":0, "TATCA":0, "TATCT":0, "TATCC":0, "TATCG":0, "TATGA":0, "TATGT":0, "TATGC":0, "TATGG":0, + "TACAA":1, "TACAT":2, "TACAC":0, "TACAG":0, "TACTA":0, "TACTT":0, "TACTC":0, "TACTG":0, "TACCA":1, "TACCT":0, "TACCC":1, "TACCG":0, "TACGA":0, "TACGT":0, "TACGC":0, "TACGG":0, + "TAGAA":0, "TAGAT":0, "TAGAC":0, "TAGAG":0, "TAGTA":0, "TAGTT":0, "TAGTC":0, "TAGTG":0, "TAGCA":0, "TAGCT":0, "TAGCC":0, "TAGCG":0, "TAGGA":1, "TAGGT":0, "TAGGC":0, "TAGGG":0, + "TTAAA":2, "TTAAT":1, "TTAAC":0, "TTAAG":0, "TTATA":1, "TTATT":0, "TTATC":0, "TTATG":0, "TTACA":1, "TTACT":0, "TTACC":0, "TTACG":0, "TTAGA":0, "TTAGT":0, "TTAGC":0, "TTAGG":0, + "TTTAA":1, "TTTAT":1, "TTTAC":1, "TTTAG":0, "TTTTA":1, "TTTTT":1, "TTTTC":0, "TTTTG":0, "TTTCA":2, "TTTCT":0, "TTTCC":0, "TTTCG":0, "TTTGA":0, "TTTGT":0, "TTTGC":0, "TTTGG":1, + "TTCAA":1, "TTCAT":1, "TTCAC":0, "TTCAG":1, "TTCTA":0, "TTCTT":0, "TTCTC":0, "TTCTG":0, "TTCCA":0, "TTCCT":2, "TTCCC":0, "TTCCG":0, "TTCGA":0, "TTCGT":0, "TTCGC":0, "TTCGG":0, + "TTGAA":1, "TTGAT":0, "TTGAC":0, "TTGAG":0, "TTGTA":0, "TTGTT":0, "TTGTC":0, "TTGTG":0, "TTGCA":0, "TTGCT":0, "TTGCC":0, "TTGCG":0, "TTGGA":2, "TTGGT":0, "TTGGC":0, "TTGGG":0, + "TCAAA":2, "TCAAT":0, "TCAAC":0, "TCAAG":0, "TCATA":0, "TCATT":1, "TCATC":0, "TCATG":0, "TCACA":1, "TCACT":0, "TCACC":0, "TCACG":0, "TCAGA":0, "TCAGT":0, "TCAGC":0, "TCAGG":1, + "TCTAA":0, "TCTAT":0, "TCTAC":0, "TCTAG":0, "TCTTA":0, "TCTTT":0, "TCTTC":0, "TCTTG":0, "TCTCA":0, "TCTCT":0, "TCTCC":0, "TCTCG":0, "TCTGA":0, "TCTGT":1, "TCTGC":0, "TCTGG":0, + "TCCAA":0, "TCCAT":0, "TCCAC":0, "TCCAG":0, "TCCTA":0, "TCCTT":0, "TCCTC":0, "TCCTG":2, "TCCCA":0, "TCCCT":0, "TCCCC":0, "TCCCG":0, "TCCGA":0, "TCCGT":0, "TCCGC":0, "TCCGG":0, + "TCGAA":0, "TCGAT":0, "TCGAC":0, "TCGAG":0, "TCGTA":0, "TCGTT":0, "TCGTC":0, "TCGTG":0, "TCGCA":0, "TCGCT":2, "TCGCC":0, "TCGCG":0, "TCGGA":0, "TCGGT":0, "TCGGC":0, "TCGGG":1, + "TGAAA":2, "TGAAT":0, "TGAAC":0, "TGAAG":0, "TGATA":0, "TGATT":0, "TGATC":0, "TGATG":0, "TGACA":1, "TGACT":0, "TGACC":0, "TGACG":0, "TGAGA":0, "TGAGT":0, "TGAGC":1, "TGAGG":0, + "TGTAA":0, "TGTAT":0, "TGTAC":1, "TGTAG":0, "TGTTA":0, "TGTTT":0, "TGTTC":0, "TGTTG":0, "TGTCA":0, "TGTCT":0, "TGTCC":0, "TGTCG":0, "TGTGA":0, "TGTGT":0, "TGTGC":0, "TGTGG":0, + "TGCAA":1, "TGCAT":0, "TGCAC":1, "TGCAG":0, "TGCTA":0, "TGCTT":0, "TGCTC":0, "TGCTG":0, "TGCCA":0, "TGCCT":0, "TGCCC":0, "TGCCG":0, "TGCGA":0, "TGCGT":0, "TGCGC":0, "TGCGG":0, + "TGGAA":1, "TGGAT":0, "TGGAC":0, "TGGAG":2, "TGGTA":2, "TGGTT":0, "TGGTC":0, "TGGTG":0, "TGGCA":1, "TGGCT":0, "TGGCC":0, "TGGCG":0, "TGGGA":1, "TGGGT":0, "TGGGC":0, "TGGGG":0, + "CAAAA":2, "CAAAT":2, "CAAAC":0, "CAAAG":2, "CAATA":1, "CAATT":0, "CAATC":0, "CAATG":0, "CAACA":0, "CAACT":0, "CAACC":0, "CAACG":0, "CAAGA":0, "CAAGT":1, "CAAGC":0, "CAAGG":0, + "CATAA":0, "CATAT":0, "CATAC":0, "CATAG":0, "CATTA":1, "CATTT":3, "CATTC":0, "CATTG":0, "CATCA":2, "CATCT":0, "CATCC":0, "CATCG":1, "CATGA":0, "CATGT":0, "CATGC":0, "CATGG":0, + "CACAA":1, "CACAT":1, "CACAC":0, "CACAG":0, "CACTA":0, "CACTT":0, "CACTC":0, "CACTG":0, "CACCA":0, "CACCT":1, "CACCC":0, "CACCG":0, "CACGA":0, "CACGT":0, "CACGC":0, "CACGG":0, + "CAGAA":0, "CAGAT":0, "CAGAC":1, "CAGAG":0, "CAGTA":0, "CAGTT":0, "CAGTC":0, "CAGTG":1, "CAGCA":0, "CAGCT":1, "CAGCC":0, "CAGCG":0, "CAGGA":1, "CAGGT":0, "CAGGC":1, "CAGGG":0, + "CTAAA":0, "CTAAT":0, "CTAAC":0, "CTAAG":0, "CTATA":0, "CTATT":0, "CTATC":0, "CTATG":0, "CTACA":0, "CTACT":0, "CTACC":0, "CTACG":0, "CTAGA":0, "CTAGT":0, "CTAGC":0, "CTAGG":0, + "CTTAA":0, "CTTAT":0, "CTTAC":0, "CTTAG":0, "CTTTA":1, "CTTTT":0, "CTTTC":0, "CTTTG":0, "CTTCA":0, "CTTCT":0, "CTTCC":2, "CTTCG":0, "CTTGA":1, "CTTGT":0, "CTTGC":0, "CTTGG":1, + "CTCAA":0, "CTCAT":0, "CTCAC":0, "CTCAG":0, "CTCTA":0, "CTCTT":0, "CTCTC":0, "CTCTG":1, "CTCCA":0, "CTCCT":0, "CTCCC":0, "CTCCG":0, "CTCGA":0, "CTCGT":0, "CTCGC":0, "CTCGG":0, + "CTGAA":1, "CTGAT":0, "CTGAC":0, "CTGAG":0, "CTGTA":1, "CTGTT":0, "CTGTC":0, "CTGTG":0, "CTGCA":1, "CTGCT":0, "CTGCC":0, "CTGCG":0, "CTGGA":0, "CTGGT":1, "CTGGC":1, "CTGGG":1, + "CCAAA":0, "CCAAT":1, "CCAAC":0, "CCAAG":0, "CCATA":0, "CCATT":0, "CCATC":0, "CCATG":0, "CCACA":0, "CCACT":0, "CCACC":1, "CCACG":0, "CCAGA":1, "CCAGT":0, "CCAGC":0, "CCAGG":1, + "CCTAA":0, "CCTAT":0, "CCTAC":0, "CCTAG":0, "CCTTA":0, "CCTTT":0, "CCTTC":1, "CCTTG":1, "CCTCA":0, "CCTCT":0, "CCTCC":0, "CCTCG":0, "CCTGA":0, "CCTGT":0, "CCTGC":1, "CCTGG":2, + "CCCAA":0, "CCCAT":0, "CCCAC":1, "CCCAG":2, "CCCTA":0, "CCCTT":0, "CCCTC":0, "CCCTG":0, "CCCCA":0, "CCCCT":0, "CCCCC":0, "CCCCG":0, "CCCGA":0, "CCCGT":0, "CCCGC":0, "CCCGG":0, + "CCGAA":0, "CCGAT":0, "CCGAC":0, "CCGAG":0, "CCGTA":0, "CCGTT":0, "CCGTC":0, "CCGTG":0, "CCGCA":0, "CCGCT":0, "CCGCC":0, "CCGCG":0, "CCGGA":0, "CCGGT":0, "CCGGC":0, "CCGGG":0, + "CGAAA":0, "CGAAT":0, "CGAAC":0, "CGAAG":0, "CGATA":0, "CGATT":0, "CGATC":0, "CGATG":0, "CGACA":0, "CGACT":0, "CGACC":0, "CGACG":0, "CGAGA":0, "CGAGT":0, "CGAGC":0, "CGAGG":0, + "CGTAA":0, "CGTAT":0, "CGTAC":0, "CGTAG":0, "CGTTA":0, "CGTTT":0, "CGTTC":0, "CGTTG":0, "CGTCA":0, "CGTCT":0, "CGTCC":0, "CGTCG":0, "CGTGA":0, "CGTGT":0, "CGTGC":0, "CGTGG":0, + "CGCAA":0, "CGCAT":0, "CGCAC":0, "CGCAG":0, "CGCTA":0, "CGCTT":1, "CGCTC":0, "CGCTG":1, "CGCCA":0, "CGCCT":0, "CGCCC":0, "CGCCG":0, "CGCGA":0, "CGCGT":0, "CGCGC":0, "CGCGG":0, + "CGGAA":0, "CGGAT":0, "CGGAC":0, "CGGAG":0, "CGGTA":0, "CGGTT":0, "CGGTC":0, "CGGTG":0, "CGGCA":0, "CGGCT":0, "CGGCC":0, "CGGCG":0, "CGGGA":1, "CGGGT":0, "CGGGC":0, "CGGGG":0, + "GAAAA":1, "GAAAT":2, "GAAAC":0, "GAAAG":1, "GAATA":1, "GAATT":0, "GAATC":0, "GAATG":0, "GAACA":0, "GAACT":0, "GAACC":1, "GAACG":0, "GAAGA":0, "GAAGT":0, "GAAGC":0, "GAAGG":1, + "GATAA":0, "GATAT":0, "GATAC":0, "GATAG":0, "GATTA":0, "GATTT":0, "GATTC":0, "GATTG":0, "GATCA":0, "GATCT":0, "GATCC":0, "GATCG":0, "GATGA":0, "GATGT":0, "GATGC":0, "GATGG":0, + "GACAA":0, "GACAT":2, "GACAC":0, "GACAG":0, "GACTA":0, "GACTT":0, "GACTC":0, "GACTG":0, "GACCA":0, "GACCT":0, "GACCC":0, "GACCG":0, "GACGA":0, "GACGT":0, "GACGC":0, "GACGG":0, + "GAGAA":1, "GAGAT":0, "GAGAC":0, "GAGAG":1, "GAGTA":1, "GAGTT":0, "GAGTC":0, "GAGTG":0, "GAGCA":1, "GAGCT":0, "GAGCC":1, "GAGCG":0, "GAGGA":0, "GAGGT":1, "GAGGC":1, "GAGGG":0, + "GTAAA":3, "GTAAT":0, "GTAAC":0, "GTAAG":0, "GTATA":1, "GTATT":0, "GTATC":0, "GTATG":0, "GTACA":1, "GTACT":0, "GTACC":2, "GTACG":0, "GTAGA":0, "GTAGT":0, "GTAGC":0, "GTAGG":0, + "GTTAA":0, "GTTAT":0, "GTTAC":0, "GTTAG":0, "GTTTA":0, "GTTTT":0, "GTTTC":0, "GTTTG":0, "GTTCA":0, "GTTCT":0, "GTTCC":0, "GTTCG":0, "GTTGA":0, "GTTGT":0, "GTTGC":0, "GTTGG":0, + "GTCAA":0, "GTCAT":0, "GTCAC":0, "GTCAG":0, "GTCTA":0, "GTCTT":0, "GTCTC":0, "GTCTG":0, "GTCCA":0, "GTCCT":0, "GTCCC":0, "GTCCG":0, "GTCGA":0, "GTCGT":0, "GTCGC":0, "GTCGG":1, + "GTGAA":0, "GTGAT":0, "GTGAC":1, "GTGAG":1, "GTGTA":0, "GTGTT":0, "GTGTC":0, "GTGTG":0, "GTGCA":0, "GTGCT":0, "GTGCC":0, "GTGCG":0, "GTGGA":0, "GTGGT":1, "GTGGC":0, "GTGGG":0, + "GCAAA":1, "GCAAT":0, "GCAAC":0, "GCAAG":0, "GCATA":0, "GCATT":0, "GCATC":1, "GCATG":0, "GCACA":1, "GCACT":0, "GCACC":0, "GCACG":0, "GCAGA":0, "GCAGT":1, "GCAGC":1, "GCAGG":0, + "GCTAA":0, "GCTAT":0, "GCTAC":0, "GCTAG":0, "GCTTA":0, "GCTTT":1, "GCTTC":1, "GCTTG":1, "GCTCA":0, "GCTCT":0, "GCTCC":0, "GCTCG":0, "GCTGA":1, "GCTGT":0, "GCTGC":0, "GCTGG":1, + "GCCAA":0, "GCCAT":0, "GCCAC":0, "GCCAG":0, "GCCTA":0, "GCCTT":0, "GCCTC":0, "GCCTG":0, "GCCCA":1, "GCCCT":0, "GCCCC":0, "GCCCG":0, "GCCGA":0, "GCCGT":0, "GCCGC":0, "GCCGG":0, + "GCGAA":0, "GCGAT":0, "GCGAC":0, "GCGAG":0, "GCGTA":0, "GCGTT":0, "GCGTC":0, "GCGTG":0, "GCGCA":0, "GCGCT":0, "GCGCC":0, "GCGCG":0, "GCGGA":0, "GCGGT":0, "GCGGC":0, "GCGGG":0, + "GGAAA":1, "GGAAT":1, "GGAAC":1, "GGAAG":1, "GGATA":0, "GGATT":1, "GGATC":0, "GGATG":0, "GGACA":0, "GGACT":0, "GGACC":0, "GGACG":0, "GGAGA":1, "GGAGT":1, "GGAGC":1, "GGAGG":2, + "GGTAA":2, "GGTAT":1, "GGTAC":1, "GGTAG":0, "GGTTA":0, "GGTTT":0, "GGTTC":0, "GGTTG":0, "GGTCA":0, "GGTCT":0, "GGTCC":0, "GGTCG":1, "GGTGA":0, "GGTGT":0, "GGTGC":0, "GGTGG":0, + "GGCAA":0, "GGCAT":0, "GGCAC":0, "GGCAG":2, "GGCTA":0, "GGCTT":1, "GGCTC":0, "GGCTG":0, "GGCCA":0, "GGCCT":0, "GGCCC":0, "GGCCG":0, "GGCGA":0, "GGCGT":0, "GGCGC":0, "GGCGG":0, + "GGGAA":2, "GGGAT":0, "GGGAC":0, "GGGAG":0, "GGGTA":1, "GGGTT":0, "GGGTC":0, "GGGTG":0, "GGGCA":0, "GGGCT":0, "GGGCC":0, "GGGCG":0, "GGGGA":0, "GGGGT":1, "GGGGC":0, "GGGGG":0 + }, + "overrepresented_sequences": { + } + }, + "read1_after_filtering": { + "total_reads": 2, + "total_bases": 286, + "q20_bases": 246, + "q30_bases": 226, + "total_cycles": 143, + "quality_curves": { + "A":[36,36,21,25,36,23,34,32,25,36,14,34,36,26.5,21,36,36,14,14,36,36,36,21,28.5,36,34,36,36,36,36,36,36,36,25,36,25,25,36,25,34,36,36,36,36,36,25,32,25,34,36,36,25,36,36,32,36,36,36,36,34,36,36,36,36,36,28.5,36,36,36,36,32,14,36,25,34,25,28.5,36,25,28.5,14,36,28.5,36,36,36,36,36,21,36,25,36,34,34,34,25,36,32,25,36,36,36,36,36,36,25,31.5,36,36,36,34,36,36,25,34,25,36,36,27,32,36,36,36,34,36,36,36,23,36,32,31.5,36,36,20.5,34,34,36,36,14,36,36,36,25], + "T":[36,36,28.5,25,36,32,36,32,25,36,25,34,36,26.5,28.5,36,36,25,36,34,36,36,28.5,28.5,25,34,34,36,25,25,36,36,36,25,36,36,36,36,25,36,34,25,36,36,36,25,36,25,32,36,36,25,36,36,32,25,25,36,36,32,36,36,36,36,36,28.5,36,36,32,32,34,25,36,25,34,25,28.5,36,25,28.5,14,25,36,27,36,34,34,36,28.5,36,36,31.5,32,36,36,25,36,32,25,36,36,36,36,36,36,36,31.5,27,36,36,34,36,25,25,34,25,36,36,29.5,29.5,36,25,34,34,36,14,27,23,34,36,31.5,14,36,20.5,34,34,32,36,23,34,27,36,25], + "C":[36,36,28.5,36,36,23,32,32,25,36,25,34,36,26.5,28.5,36,36,25,25,34,36,36,28.5,28.5,14,32,32,36,14,14,36,36,36,14,36,25,25,36,25,32,32,14,36,36,36,25,34,25,34,36,36,25,36,36,32,25,25,36,36,34,36,36,36,36,36,28.5,36,36,34,34,34,36,36,14,32,14,28.5,36,25,21,14,25,21,31.5,36,32,32,36,28.5,36,14,27,34,34,34,25,36,32,25,36,36,36,36,36,36,14,31.5,31.5,36,36,34,36,25,25,34,25,36,36,32,27,36,25,32,34,36,25,31.5,23,32,34,31.5,25,36,20.5,34,34,34,36,23,34,31.5,36,25], + "G":[36,36,36,14,36,14,34,32,25,36,36,34,36,26.5,36,36,36,36,25,32,36,36,36,28.5,25,36,34,36,25,25,36,36,36,36,36,14,14,36,25,34,34,25,36,36,36,25,34,25,36,36,36,25,36,36,32,14,14,36,36,36,36,36,36,36,36,28.5,36,36,34,34,36,25,36,36,36,36,28.5,36,25,36,14,14,28.5,31.5,36,34,34,36,36,36,25,31.5,36,32,32,25,36,32,25,36,36,36,36,36,36,25,31.5,31.5,36,36,34,36,14,25,34,25,36,36,29.5,29.5,36,14,34,34,36,25,31.5,23,34,34,31.5,25,36,20.5,34,34,34,36,32,32,31.5,36,25], + "mean":[36,36,28.5,25,36,23,34,32,25,36,25,34,36,26.5,28.5,36,36,25,25,34,36,36,28.5,28.5,25,34,34,36,25,25,36,36,36,25,36,25,25,36,25,34,34,25,36,36,36,25,34,25,34,36,36,25,36,36,32,25,25,36,36,34,36,36,36,36,36,28.5,36,36,34,34,34,25,36,25,34,25,28.5,36,25,28.5,14,25,28.5,31.5,36,34,34,36,28.5,36,25,31.5,34,34,34,25,36,32,25,36,36,36,36,36,36,25,31.5,31.5,36,36,34,36,25,25,34,25,36,36,29.5,29.5,36,25,34,34,36,25,31.5,23,34,34,31.5,25,36,20.5,34,34,34,36,23,34,31.5,36,25] + }, + "content_curves": { + "A":[0,0,0.5,0,1,0,0,0.5,0,0,0.5,1,0.5,1,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,0.5,0.5,0.5,0,0,0,0,0,0,0,1,0,0.5,0.5,1,0.5,0.5,0,0.5,0,0,0.5,0.5,1,0.5,0,0.5,0.5,0.5,0,0.5,0,0,0,1,1,1,0,0.5,0,0.5,0.5,0.5,0.5,0.5,0,0,0,1,0.5,0,0,0.5,0.5,0,0.5,0.5,0.5,0.5,0.5,0.5,0,0,0.5,0,0,0,1,0,1,0,0,0.5,0,0.5,1,0,0,1,0.5,0.5,0.5,1,1,0.5,0,0,0,0.5,1,0.5,0.5,0,0.5,0.5,1,1,0.5,0.5,0,0.5,0.5,0,0.5,0.5,1,0,1,0.5,0.5,0.5,0.5,0.5,0.5,0], + "T":[0.5,0.5,0,0,0,0.5,0.5,0,0,0.5,0,0,0.5,0,0,0.5,0,0,0.5,0,0.5,0,0,0,0,0,0,0,0,0,0.5,1,0,0,0.5,0.5,0.5,1,0,0.5,0,0,0,0,0,0,0.5,1,0.5,0.5,0,0,0,0,0,0,0,1,0,0.5,0.5,0,0,0,0,1,0.5,1,0.5,0.5,0,0,0.5,0,0,0,0,0,0,0,0.5,0,0.5,0.5,0.5,0,0,0.5,0,0,0.5,0,0.5,0.5,0.5,0,0,0,1,0.5,0.5,0,0,0,0,0.5,0,0.5,0,0,0,0,0,1,0,0,0.5,0,0,0,1,0,0,0,0,0.5,0.5,1,0,0.5,1,0.5,0.5,0,0,0,0.5,0.5,0,0,0.5,0.5,1], + "C":[0,0.5,0,0.5,0,0,0.5,0,1,0.5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5,0.5,0.5,0,0.5,0.5,0,0,1,0.5,0.5,0,0,0,0,0.5,0.5,0.5,0,0,0.5,1,0,0,0,0,0.5,0,0,0,0,0,0,0,0.5,0,0,0.5,0,0,0,0,0,0,0,0,0,0.5,0,0.5,0.5,0.5,0,0,0,0.5,0,0,0.5,0,0,0.5,0.5,0,0,0.5,0.5,0.5,0,0,0,0,1,0,0,0.5,0,0.5,0,0,0,0.5,0,0,0.5,0.5,0,0,0,0,0,0,0,0,0.5,0.5,0,0,0.5,0,0,0,0,0,0.5,0,0,0,0,0,1,0,0,0,0,0,0,0,0], + "G":[0.5,0,0.5,0.5,0,0.5,0,0.5,0,0,0.5,0,0,0,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,1,0,0.5,0,0.5,0,0,0,0,0,0.5,0,0.5,0.5,0,0,0,0,0,0,0.5,0,0,0,0,0.5,0,0,0,0.5,1,0.5,0.5,0.5,0,0,0.5,0.5,0.5,0,0,0,0,0,0,0,0,0.5,0,0,0.5,0.5,0.5,0,0.5,1,0.5,0,0.5,0,0,0,0,0,0,0.5,0.5,0,0,0.5,0.5,0.5,0,0,0,0,0,0,0.5,0.5,0,1,0,0,0,0,0,0,0,0.5,0,1,1,0,0,0,0,0,0.5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5,0.5,0,0,0], + "N":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0], + "GC":[0.5,0.5,0.5,1,0,0.5,0.5,0.5,1,0.5,0.5,0,0,0,0.5,0.5,0.5,0.5,0,0.5,0,0.5,0.5,1,0.5,1,0.5,0.5,0.5,0.5,0,0,1,1,0.5,0.5,0.5,0,0,0.5,0.5,0.5,0,0.5,0.5,1,0,0,0.5,0,0.5,0,0.5,1,0.5,0.5,0.5,0,0.5,0.5,0.5,1,0,0,0,0,0,0,0,0,0.5,0.5,0,1,1,1,0,0.5,1,1,0,0.5,0.5,0,0,0.5,0.5,0,0.5,1,0.5,0.5,0.5,0.5,0.5,0,1,0,0,0.5,0,1,0.5,0,1,0.5,0,0,0.5,0.5,0,0,0.5,0,1,1,0,0,0.5,0.5,0,0.5,0.5,0,0,0,0,0,0.5,0,0,0,0,0,1,0,0,0,0.5,0.5,0,0,0] + }, + "kmer_count": { + "AAAAA":2, "AAAAT":2, "AAAAC":2, "AAAAG":1, "AAATA":3, "AAATT":2, "AAATC":1, "AAATG":1, "AAACA":2, "AAACT":1, "AAACC":2, "AAACG":0, "AAAGA":0, "AAAGT":2, "AAAGC":0, "AAAGG":4, + "AATAA":3, "AATAT":4, "AATAC":0, "AATAG":0, "AATTA":0, "AATTT":2, "AATTC":0, "AATTG":0, "AATCA":0, "AATCT":0, "AATCC":0, "AATCG":1, "AATGA":0, "AATGT":0, "AATGC":0, "AATGG":1, + "AACAA":2, "AACAT":0, "AACAC":0, "AACAG":0, "AACTA":0, "AACTT":0, "AACTC":1, "AACTG":0, "AACCA":0, "AACCT":2, "AACCC":1, "AACCG":0, "AACGA":0, "AACGT":0, "AACGC":0, "AACGG":0, + "AAGAA":0, "AAGAT":0, "AAGAC":0, "AAGAG":0, "AAGTA":1, "AAGTT":0, "AAGTC":0, "AAGTG":2, "AAGCA":0, "AAGCT":1, "AAGCC":0, "AAGCG":0, "AAGGA":3, "AAGGT":1, "AAGGC":0, "AAGGG":1, + "ATAAA":4, "ATAAT":1, "ATAAC":0, "ATAAG":1, "ATATA":1, "ATATT":2, "ATATC":0, "ATATG":0, "ATACA":0, "ATACT":0, "ATACC":0, "ATACG":0, "ATAGA":0, "ATAGT":0, "ATAGC":0, "ATAGG":0, + "ATTAA":2, "ATTAT":0, "ATTAC":0, "ATTAG":0, "ATTTA":1, "ATTTT":1, "ATTTC":2, "ATTTG":1, "ATTCA":1, "ATTCT":0, "ATTCC":0, "ATTCG":0, "ATTGA":0, "ATTGT":0, "ATTGC":0, "ATTGG":0, + "ATCAA":1, "ATCAT":0, "ATCAC":1, "ATCAG":0, "ATCTA":0, "ATCTT":0, "ATCTC":0, "ATCTG":0, "ATCCA":0, "ATCCT":0, "ATCCC":0, "ATCCG":0, "ATCGA":0, "ATCGT":0, "ATCGC":2, "ATCGG":0, + "ATGAA":0, "ATGAT":0, "ATGAC":0, "ATGAG":0, "ATGTA":0, "ATGTT":0, "ATGTC":0, "ATGTG":0, "ATGCA":0, "ATGCT":0, "ATGCC":0, "ATGCG":0, "ATGGA":1, "ATGGT":0, "ATGGC":0, "ATGGG":0, + "ACAAA":2, "ACAAT":0, "ACAAC":0, "ACAAG":1, "ACATA":0, "ACATT":3, "ACATC":2, "ACATG":0, "ACACA":0, "ACACT":0, "ACACC":0, "ACACG":0, "ACAGA":0, "ACAGT":0, "ACAGC":0, "ACAGG":0, + "ACTAA":0, "ACTAT":0, "ACTAC":0, "ACTAG":0, "ACTTA":0, "ACTTT":0, "ACTTC":0, "ACTTG":0, "ACTCA":0, "ACTCT":1, "ACTCC":0, "ACTCG":0, "ACTGA":0, "ACTGT":0, "ACTGC":0, "ACTGG":0, + "ACCAA":1, "ACCAT":0, "ACCAC":0, "ACCAG":0, "ACCTA":0, "ACCTT":2, "ACCTC":0, "ACCTG":1, "ACCCA":2, "ACCCT":0, "ACCCC":0, "ACCCG":0, "ACCGA":0, "ACCGT":0, "ACCGC":0, "ACCGG":0, + "ACGAA":0, "ACGAT":0, "ACGAC":0, "ACGAG":0, "ACGTA":0, "ACGTT":0, "ACGTC":0, "ACGTG":0, "ACGCA":0, "ACGCT":0, "ACGCC":0, "ACGCG":0, "ACGGA":0, "ACGGT":0, "ACGGC":0, "ACGGG":0, + "AGAAA":1, "AGAAT":0, "AGAAC":0, "AGAAG":0, "AGATA":0, "AGATT":0, "AGATC":0, "AGATG":0, "AGACA":1, "AGACT":0, "AGACC":0, "AGACG":0, "AGAGA":1, "AGAGT":0, "AGAGC":0, "AGAGG":0, + "AGTAA":1, "AGTAT":0, "AGTAC":1, "AGTAG":0, "AGTTA":0, "AGTTT":0, "AGTTC":0, "AGTTG":0, "AGTCA":0, "AGTCT":0, "AGTCC":0, "AGTCG":0, "AGTGA":2, "AGTGT":0, "AGTGC":0, "AGTGG":1, + "AGCAA":0, "AGCAT":1, "AGCAC":0, "AGCAG":0, "AGCTA":0, "AGCTT":1, "AGCTC":0, "AGCTG":1, "AGCCA":0, "AGCCT":0, "AGCCC":1, "AGCCG":0, "AGCGA":0, "AGCGT":0, "AGCGC":0, "AGCGG":0, + "AGGAA":1, "AGGAT":1, "AGGAC":0, "AGGAG":2, "AGGTA":1, "AGGTT":0, "AGGTC":1, "AGGTG":0, "AGGCA":1, "AGGCT":0, "AGGCC":0, "AGGCG":0, "AGGGA":0, "AGGGT":0, "AGGGC":0, "AGGGG":1, + "TAAAA":3, "TAAAT":1, "TAAAC":3, "TAAAG":2, "TAATA":2, "TAATT":0, "TAATC":0, "TAATG":0, "TAACA":0, "TAACT":0, "TAACC":0, "TAACG":0, "TAAGA":0, "TAAGT":0, "TAAGC":1, "TAAGG":0, + "TATAA":3, "TATAT":0, "TATAC":0, "TATAG":0, "TATTA":1, "TATTT":0, "TATTC":1, "TATTG":0, "TATCA":0, "TATCT":0, "TATCC":0, "TATCG":0, "TATGA":0, "TATGT":0, "TATGC":0, "TATGG":0, + "TACAA":0, "TACAT":2, "TACAC":0, "TACAG":0, "TACTA":0, "TACTT":0, "TACTC":0, "TACTG":0, "TACCA":1, "TACCT":0, "TACCC":1, "TACCG":0, "TACGA":0, "TACGT":0, "TACGC":0, "TACGG":0, + "TAGAA":0, "TAGAT":0, "TAGAC":0, "TAGAG":0, "TAGTA":0, "TAGTT":0, "TAGTC":0, "TAGTG":0, "TAGCA":0, "TAGCT":0, "TAGCC":0, "TAGCG":0, "TAGGA":0, "TAGGT":0, "TAGGC":0, "TAGGG":0, + "TTAAA":2, "TTAAT":1, "TTAAC":0, "TTAAG":0, "TTATA":1, "TTATT":0, "TTATC":0, "TTATG":0, "TTACA":1, "TTACT":0, "TTACC":0, "TTACG":0, "TTAGA":0, "TTAGT":0, "TTAGC":0, "TTAGG":0, + "TTTAA":1, "TTTAT":1, "TTTAC":1, "TTTAG":0, "TTTTA":1, "TTTTT":1, "TTTTC":0, "TTTTG":0, "TTTCA":2, "TTTCT":0, "TTTCC":0, "TTTCG":0, "TTTGA":0, "TTTGT":0, "TTTGC":0, "TTTGG":1, + "TTCAA":1, "TTCAT":1, "TTCAC":0, "TTCAG":1, "TTCTA":0, "TTCTT":0, "TTCTC":0, "TTCTG":0, "TTCCA":0, "TTCCT":2, "TTCCC":0, "TTCCG":0, "TTCGA":0, "TTCGT":0, "TTCGC":0, "TTCGG":0, + "TTGAA":1, "TTGAT":0, "TTGAC":0, "TTGAG":0, "TTGTA":0, "TTGTT":0, "TTGTC":0, "TTGTG":0, "TTGCA":0, "TTGCT":0, "TTGCC":0, "TTGCG":0, "TTGGA":2, "TTGGT":0, "TTGGC":0, "TTGGG":0, + "TCAAA":2, "TCAAT":0, "TCAAC":0, "TCAAG":0, "TCATA":0, "TCATT":1, "TCATC":0, "TCATG":0, "TCACA":1, "TCACT":0, "TCACC":0, "TCACG":0, "TCAGA":0, "TCAGT":0, "TCAGC":0, "TCAGG":1, + "TCTAA":0, "TCTAT":0, "TCTAC":0, "TCTAG":0, "TCTTA":0, "TCTTT":0, "TCTTC":0, "TCTTG":0, "TCTCA":0, "TCTCT":0, "TCTCC":0, "TCTCG":0, "TCTGA":0, "TCTGT":1, "TCTGC":0, "TCTGG":0, + "TCCAA":0, "TCCAT":0, "TCCAC":0, "TCCAG":0, "TCCTA":0, "TCCTT":0, "TCCTC":0, "TCCTG":2, "TCCCA":0, "TCCCT":0, "TCCCC":0, "TCCCG":0, "TCCGA":0, "TCCGT":0, "TCCGC":0, "TCCGG":0, + "TCGAA":0, "TCGAT":0, "TCGAC":0, "TCGAG":0, "TCGTA":0, "TCGTT":0, "TCGTC":0, "TCGTG":0, "TCGCA":0, "TCGCT":2, "TCGCC":0, "TCGCG":0, "TCGGA":0, "TCGGT":0, "TCGGC":0, "TCGGG":1, + "TGAAA":2, "TGAAT":0, "TGAAC":0, "TGAAG":0, "TGATA":0, "TGATT":0, "TGATC":0, "TGATG":0, "TGACA":1, "TGACT":0, "TGACC":0, "TGACG":0, "TGAGA":0, "TGAGT":0, "TGAGC":1, "TGAGG":0, + "TGTAA":0, "TGTAT":0, "TGTAC":1, "TGTAG":0, "TGTTA":0, "TGTTT":0, "TGTTC":0, "TGTTG":0, "TGTCA":0, "TGTCT":0, "TGTCC":0, "TGTCG":0, "TGTGA":0, "TGTGT":0, "TGTGC":0, "TGTGG":0, + "TGCAA":1, "TGCAT":0, "TGCAC":0, "TGCAG":0, "TGCTA":0, "TGCTT":0, "TGCTC":0, "TGCTG":0, "TGCCA":0, "TGCCT":0, "TGCCC":0, "TGCCG":0, "TGCGA":0, "TGCGT":0, "TGCGC":0, "TGCGG":0, + "TGGAA":1, "TGGAT":0, "TGGAC":0, "TGGAG":2, "TGGTA":2, "TGGTT":0, "TGGTC":0, "TGGTG":0, "TGGCA":1, "TGGCT":0, "TGGCC":0, "TGGCG":0, "TGGGA":1, "TGGGT":0, "TGGGC":0, "TGGGG":0, + "CAAAA":1, "CAAAT":2, "CAAAC":0, "CAAAG":2, "CAATA":1, "CAATT":0, "CAATC":0, "CAATG":0, "CAACA":0, "CAACT":0, "CAACC":0, "CAACG":0, "CAAGA":0, "CAAGT":1, "CAAGC":0, "CAAGG":0, + "CATAA":0, "CATAT":0, "CATAC":0, "CATAG":0, "CATTA":1, "CATTT":3, "CATTC":0, "CATTG":0, "CATCA":2, "CATCT":0, "CATCC":0, "CATCG":1, "CATGA":0, "CATGT":0, "CATGC":0, "CATGG":0, + "CACAA":1, "CACAT":1, "CACAC":0, "CACAG":0, "CACTA":0, "CACTT":0, "CACTC":0, "CACTG":0, "CACCA":0, "CACCT":1, "CACCC":0, "CACCG":0, "CACGA":0, "CACGT":0, "CACGC":0, "CACGG":0, + "CAGAA":0, "CAGAT":0, "CAGAC":1, "CAGAG":0, "CAGTA":0, "CAGTT":0, "CAGTC":0, "CAGTG":1, "CAGCA":0, "CAGCT":1, "CAGCC":0, "CAGCG":0, "CAGGA":1, "CAGGT":0, "CAGGC":1, "CAGGG":0, + "CTAAA":0, "CTAAT":0, "CTAAC":0, "CTAAG":0, "CTATA":0, "CTATT":0, "CTATC":0, "CTATG":0, "CTACA":0, "CTACT":0, "CTACC":0, "CTACG":0, "CTAGA":0, "CTAGT":0, "CTAGC":0, "CTAGG":0, + "CTTAA":0, "CTTAT":0, "CTTAC":0, "CTTAG":0, "CTTTA":1, "CTTTT":0, "CTTTC":0, "CTTTG":0, "CTTCA":0, "CTTCT":0, "CTTCC":2, "CTTCG":0, "CTTGA":1, "CTTGT":0, "CTTGC":0, "CTTGG":0, + "CTCAA":0, "CTCAT":0, "CTCAC":0, "CTCAG":0, "CTCTA":0, "CTCTT":0, "CTCTC":0, "CTCTG":1, "CTCCA":0, "CTCCT":0, "CTCCC":0, "CTCCG":0, "CTCGA":0, "CTCGT":0, "CTCGC":0, "CTCGG":0, + "CTGAA":1, "CTGAT":0, "CTGAC":0, "CTGAG":0, "CTGTA":1, "CTGTT":0, "CTGTC":0, "CTGTG":0, "CTGCA":1, "CTGCT":0, "CTGCC":0, "CTGCG":0, "CTGGA":0, "CTGGT":1, "CTGGC":1, "CTGGG":1, + "CCAAA":0, "CCAAT":1, "CCAAC":0, "CCAAG":0, "CCATA":0, "CCATT":0, "CCATC":0, "CCATG":0, "CCACA":0, "CCACT":0, "CCACC":1, "CCACG":0, "CCAGA":1, "CCAGT":0, "CCAGC":0, "CCAGG":1, + "CCTAA":0, "CCTAT":0, "CCTAC":0, "CCTAG":0, "CCTTA":0, "CCTTT":0, "CCTTC":1, "CCTTG":1, "CCTCA":0, "CCTCT":0, "CCTCC":0, "CCTCG":0, "CCTGA":0, "CCTGT":0, "CCTGC":1, "CCTGG":2, + "CCCAA":0, "CCCAT":0, "CCCAC":1, "CCCAG":2, "CCCTA":0, "CCCTT":0, "CCCTC":0, "CCCTG":0, "CCCCA":0, "CCCCT":0, "CCCCC":0, "CCCCG":0, "CCCGA":0, "CCCGT":0, "CCCGC":0, "CCCGG":0, + "CCGAA":0, "CCGAT":0, "CCGAC":0, "CCGAG":0, "CCGTA":0, "CCGTT":0, "CCGTC":0, "CCGTG":0, "CCGCA":0, "CCGCT":0, "CCGCC":0, "CCGCG":0, "CCGGA":0, "CCGGT":0, "CCGGC":0, "CCGGG":0, + "CGAAA":0, "CGAAT":0, "CGAAC":0, "CGAAG":0, "CGATA":0, "CGATT":0, "CGATC":0, "CGATG":0, "CGACA":0, "CGACT":0, "CGACC":0, "CGACG":0, "CGAGA":0, "CGAGT":0, "CGAGC":0, "CGAGG":0, + "CGTAA":0, "CGTAT":0, "CGTAC":0, "CGTAG":0, "CGTTA":0, "CGTTT":0, "CGTTC":0, "CGTTG":0, "CGTCA":0, "CGTCT":0, "CGTCC":0, "CGTCG":0, "CGTGA":0, "CGTGT":0, "CGTGC":0, "CGTGG":0, + "CGCAA":0, "CGCAT":0, "CGCAC":0, "CGCAG":0, "CGCTA":0, "CGCTT":1, "CGCTC":0, "CGCTG":1, "CGCCA":0, "CGCCT":0, "CGCCC":0, "CGCCG":0, "CGCGA":0, "CGCGT":0, "CGCGC":0, "CGCGG":0, + "CGGAA":0, "CGGAT":0, "CGGAC":0, "CGGAG":0, "CGGTA":0, "CGGTT":0, "CGGTC":0, "CGGTG":0, "CGGCA":0, "CGGCT":0, "CGGCC":0, "CGGCG":0, "CGGGA":1, "CGGGT":0, "CGGGC":0, "CGGGG":0, + "GAAAA":1, "GAAAT":2, "GAAAC":0, "GAAAG":1, "GAATA":1, "GAATT":0, "GAATC":0, "GAATG":0, "GAACA":0, "GAACT":0, "GAACC":1, "GAACG":0, "GAAGA":0, "GAAGT":0, "GAAGC":0, "GAAGG":1, + "GATAA":0, "GATAT":0, "GATAC":0, "GATAG":0, "GATTA":0, "GATTT":0, "GATTC":0, "GATTG":0, "GATCA":0, "GATCT":0, "GATCC":0, "GATCG":0, "GATGA":0, "GATGT":0, "GATGC":0, "GATGG":0, + "GACAA":0, "GACAT":2, "GACAC":0, "GACAG":0, "GACTA":0, "GACTT":0, "GACTC":0, "GACTG":0, "GACCA":0, "GACCT":0, "GACCC":0, "GACCG":0, "GACGA":0, "GACGT":0, "GACGC":0, "GACGG":0, + "GAGAA":1, "GAGAT":0, "GAGAC":0, "GAGAG":1, "GAGTA":1, "GAGTT":0, "GAGTC":0, "GAGTG":0, "GAGCA":1, "GAGCT":0, "GAGCC":1, "GAGCG":0, "GAGGA":0, "GAGGT":1, "GAGGC":0, "GAGGG":0, + "GTAAA":3, "GTAAT":0, "GTAAC":0, "GTAAG":0, "GTATA":1, "GTATT":0, "GTATC":0, "GTATG":0, "GTACA":1, "GTACT":0, "GTACC":2, "GTACG":0, "GTAGA":0, "GTAGT":0, "GTAGC":0, "GTAGG":0, + "GTTAA":0, "GTTAT":0, "GTTAC":0, "GTTAG":0, "GTTTA":0, "GTTTT":0, "GTTTC":0, "GTTTG":0, "GTTCA":0, "GTTCT":0, "GTTCC":0, "GTTCG":0, "GTTGA":0, "GTTGT":0, "GTTGC":0, "GTTGG":0, + "GTCAA":0, "GTCAT":0, "GTCAC":0, "GTCAG":0, "GTCTA":0, "GTCTT":0, "GTCTC":0, "GTCTG":0, "GTCCA":0, "GTCCT":0, "GTCCC":0, "GTCCG":0, "GTCGA":0, "GTCGT":0, "GTCGC":0, "GTCGG":1, + "GTGAA":0, "GTGAT":0, "GTGAC":1, "GTGAG":1, "GTGTA":0, "GTGTT":0, "GTGTC":0, "GTGTG":0, "GTGCA":0, "GTGCT":0, "GTGCC":0, "GTGCG":0, "GTGGA":0, "GTGGT":1, "GTGGC":0, "GTGGG":0, + "GCAAA":1, "GCAAT":0, "GCAAC":0, "GCAAG":0, "GCATA":0, "GCATT":0, "GCATC":1, "GCATG":0, "GCACA":1, "GCACT":0, "GCACC":0, "GCACG":0, "GCAGA":0, "GCAGT":1, "GCAGC":1, "GCAGG":0, + "GCTAA":0, "GCTAT":0, "GCTAC":0, "GCTAG":0, "GCTTA":0, "GCTTT":1, "GCTTC":1, "GCTTG":0, "GCTCA":0, "GCTCT":0, "GCTCC":0, "GCTCG":0, "GCTGA":1, "GCTGT":0, "GCTGC":0, "GCTGG":1, + "GCCAA":0, "GCCAT":0, "GCCAC":0, "GCCAG":0, "GCCTA":0, "GCCTT":0, "GCCTC":0, "GCCTG":0, "GCCCA":1, "GCCCT":0, "GCCCC":0, "GCCCG":0, "GCCGA":0, "GCCGT":0, "GCCGC":0, "GCCGG":0, + "GCGAA":0, "GCGAT":0, "GCGAC":0, "GCGAG":0, "GCGTA":0, "GCGTT":0, "GCGTC":0, "GCGTG":0, "GCGCA":0, "GCGCT":0, "GCGCC":0, "GCGCG":0, "GCGGA":0, "GCGGT":0, "GCGGC":0, "GCGGG":0, + "GGAAA":1, "GGAAT":1, "GGAAC":1, "GGAAG":1, "GGATA":0, "GGATT":1, "GGATC":0, "GGATG":0, "GGACA":0, "GGACT":0, "GGACC":0, "GGACG":0, "GGAGA":1, "GGAGT":1, "GGAGC":1, "GGAGG":1, + "GGTAA":2, "GGTAT":1, "GGTAC":1, "GGTAG":0, "GGTTA":0, "GGTTT":0, "GGTTC":0, "GGTTG":0, "GGTCA":0, "GGTCT":0, "GGTCC":0, "GGTCG":1, "GGTGA":0, "GGTGT":0, "GGTGC":0, "GGTGG":0, + "GGCAA":0, "GGCAT":0, "GGCAC":0, "GGCAG":2, "GGCTA":0, "GGCTT":0, "GGCTC":0, "GGCTG":0, "GGCCA":0, "GGCCT":0, "GGCCC":0, "GGCCG":0, "GGCGA":0, "GGCGT":0, "GGCGC":0, "GGCGG":0, + "GGGAA":2, "GGGAT":0, "GGGAC":0, "GGGAG":0, "GGGTA":1, "GGGTT":0, "GGGTC":0, "GGGTG":0, "GGGCA":0, "GGGCT":0, "GGGCC":0, "GGGCG":0, "GGGGA":0, "GGGGT":1, "GGGGC":0, "GGGGG":0 + }, + "overrepresented_sequences": { + } + }, + "command": "fastp --thread 1 --report_title fastp report for R1_fq.fastq -i R1_fq.fastq -o first.fastq -U --umi_loc read1 --umi_len 8 " +} \ No newline at end of file
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/fastp2.json.txt Wed Aug 08 08:49:39 2018 -0400 @@ -0,0 +1,412 @@ +{ + "summary": { + "before_filtering": { + "total_reads":198, + "total_bases":49698, + "q20_bases":45944, + "q30_bases":43923, + "q20_rate":0.924464, + "q30_rate":0.883798, + "read1_mean_length":251, + "read2_mean_length":251, + "gc_content":0.480422 + }, + "after_filtering": { + "total_reads":194, + "total_bases":45884, + "q20_bases":43215, + "q30_bases":41653, + "q20_rate":0.941832, + "q30_rate":0.907789, + "read1_mean_length":236, + "read2_mean_length":236, + "gc_content":0.479928 + } + }, + "filtering_result": { + "passed_filter_reads": 194, + "low_quality_reads": 2, + "too_many_N_reads": 2, + "too_short_reads": 0, + "too_long_reads": 0 + }, + "duplication": { + "rate": 0, + "histogram": [69,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0], + "mean_gc": [0.396022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] + }, + "insert_size": { + "peak": 308, + "unknown": 4, + "histogram": [0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,1,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,1,0,1,1,1,1,0,0,0,1,0,2,1,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,1,0,0,0,0,0,2,0,0,0,1,0,2,0,1,0,1,3,1,0,0,0,0,0,0,1,0,1,0,2,0,0,1,1,0,1,0,0,1,0,1,1,1,1,0,1,1,0,2,1,1,0,1,0,1,1,0,1,0,0,0,2,0,0,0,2,1,1,2,1,0,0,1,1,2,0,0,2,1,0,0,2,0,1,0,0,1,2,0,4,2,0,0,0,1,0,1,1,0,0,0,0,0,0,0,0,1,1,0,0,1,0,1,0,2,1,1,1,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] + }, + "adapter_cutting": { + "adapter_trimmed_reads": 66, + "adapter_trimmed_bases": 2810, + "read1_adapter_sequence": "unspecified", + "read2_adapter_sequence": "unspecified", + "read1_adapter_counts": {"CTG":2, "CTGTC":1, "CTGTCTCTTATACA":1, "CTGTCTCTTATACAC":3, "CTGTCTCTTATACACA":1, "CTGTCTATTATACACATC":1, "CTGTCTCTTATACACATCTC":1, "CTGTCTCTTATACACCTCTC":1, "CTGTCTCTTATACACATCTCCG":1, "CTGTCTCTTATACACATCTCCGAGCC":2, "CTGTCTCTTATACACATCTCCGAGCCCACGAG":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGA":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAA":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATTTCGT":1, "CTGTCTCTTATACACATATCCACGCCCACGAGACTAAGGCGAAGTTCATT":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTT":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATG":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATATCGTATGCCGT":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCAGTT":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGGATGCCGTCT":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTT":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTTCT":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATATCGTATGCCGTCTTCTGCTTGA":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTTCTGCTTGAA":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTTCTGCTTGCAAAAAAAAAATAG":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTTCTGCTTGCAACAAACACACATCCAGA":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAACAACAGAC":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGACTTCTGCTTGAAAAAAAAAAACTACAACCCACGGACGCA":1, "CTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTTCTGCTTGACAAAAAAAAACACACAACAACCAACACCCAGTAGACTAGTGCGTC":1}, + "read2_adapter_counts": {"CTG":1, "CTT":1, "CTGTC":1, "CTGTCTCTTATACA":1, "CTGTCTCTTATACAC":3, "CTGTCTCTTATACACA":1, "CTGTCTCTTATACACATT":1, "CTGTCTCTTATACACATCTG":2, "CTGTCTCTTATACACATCTGAC":1, "CTGTCTCTTATACACATCTGAGCTTC":1, "CTGTCTCTTATACACATTTGTCGCTC":1, "CTGTCTCTTATACACATCTGACGCTGCCGAGA":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGG":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGG":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGTAGAT":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGCTAGTTGAGATC":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGGAGATT":1, "CTGTCTCTTATACACATCTGACGCTGCCGCCGAGGGCTCTAGTTGTGGTCTG":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGTCGATCTCTGTG":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGGTCCAGTGTAGAGTTATGGGG":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGACCGATCTAGTATAGATCTTGGGTGG":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCAAGTGTAGTGCTCGGGGGGG":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGGAGATCTTGGGGGGTGG":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGACCTAGTGGTGATATAGGGGTGTCCCGCGTT":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGGAGATCTCTGGGGTCGGCGGATTT":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGTAGAGCTCGGGGGTCGCCGTGTATTTTTACAAAAAA":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGGAGAGTTCTGTGGGGCCGGGGATCCTTATAAAAAAAATAGA":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGTAGGTCTTGGTGGTCGTCCTCGTATTTGAACACATAATCGTG":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAGTTGAGAACTCGGGGGTTGCCCTGTCATTCACAAACAAACACATAGCACTCAAG":1, "CTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGTAGATCTCGGGGGGTGCCGGCTCATTAAAAAAAGAAGATGTCGAGATGTCAGTGCGTGAGTGGAAGTG":1} + }, + "read1_before_filtering": { + "total_reads": 99, + "total_bases": 24849, + "q20_bases": 23268, + "q30_bases": 22391, + "total_cycles": 251, + "quality_curves": { + "A":[31.4516,33,31.8889,32.1364,32.4091,36.4524,35.6667,36.0851,35.9167,35.0882,35.913,36.0645,37.5172,36.8421,37.7143,37.1,37.7826,37.5667,37.6786,36.4667,36.3235,36.2571,38.2368,37.6486,38.3784,38.2326,37.875,38.3548,38.2273,38.12,38.6216,38.5294,38.5,38.0278,38.5429,37.5789,37.9167,38.087,37.8636,38.3077,37.0286,38.1389,37.2105,38.2692,37.2895,38.2,38.2368,38.1667,38.0606,37.8571,38.5758,38.3421,37.64,36.75,38.2143,36.7105,38.5455,38.1818,38.2581,38.1875,38.32,36.92,38.325,37.7037,38.4444,38.069,36.9706,37.6923,38,38.275,37.5333,38.2593,37.08,36.4615,37.3556,38.08,37.3793,37.6667,38.4643,37.6,35.85,37.027,35.6296,37.2647,35.7568,37.4,37.697,38.375,38.4615,37.1905,36.3333,37.2609,37.7,38.65,37.1111,38.3,38.25,37.3333,38.25,36.92,37.1786,37.5185,36.3333,38.037,38,37.6429,38.6667,38.3103,37.3043,36.0435,37.1667,37.3158,36.76,36.8889,37.4667,36.5926,37.5333,37.4074,36.619,36.8214,35.9655,37.381,37.4545,37.3333,34.2143,35.5417,36.5556,35.5862,37.2414,35.8065,37.7,37.2174,35.1667,37.8,35.95,35.9032,37.2727,36.2857,35.3158,37.037,34.375,35.6364,35.6923,35.6957,35.1364,35.7083,37.6,37.1176,36.5238,37.8333,33.5,34.5333,34.2727,36.625,35.9444,35.5,37.2692,37.4615,36.1053,37.6842,34.2857,32.5909,38,36.5862,35.8235,36.4737,34.7826,37.7333,32.4667,35.1765,34.1429,35.5,34.2,30.7368,33.3824,32.3571,36.5833,36.4,35.2,33.087,36.24,34.5,35.2778,32.5556,36.1579,34.6667,33.1923,33.3214,34.75,27.5294,34.1562,33.3871,31.6,36.0526,33.5238,33.1852,33.625,33.1667,31.45,31.55,31.6087,33.087,30,34.7222,35.0588,33.7143,31.5217,31.35,30.6667,30.35,30.4,29.8824,32.7917,34.625,28.4,31.75,31.381,30.8696,30.913,34.0968,30.8929,28.8889,30.76,32.7895,29.9444,30.8696,29.3636,29.25,29.28,31.6667,29.3,29.56,29.7857,26.4,31,30.5385,31.4815,27.6,22.7222,29.1333,27.0476,28.4444,23.1818,29.7273,27.2188,28.125,29.9524,27.5,30.4286,27.0526,16.8571], + "T":[33.1111,31.7273,32.2143,32.5455,31.6154,35.5333,36.9231,36.7895,35.381,36.2414,35.0303,36.6087,37.8684,37.5625,36.8571,37.8125,37.697,36.85,36.3333,37.6154,37.5,37.4615,37.3438,37.871,38.5833,37.4444,37.5909,36.9643,36.8519,37.2333,37.56,38.64,37.8387,38.4091,36.8947,37.2273,37.4091,38.2273,37.16,37.6129,37.8214,36.2083,37.0625,37.6129,36.2857,37.2222,37.5789,37.56,37.92,38.4762,38.4167,37.5217,38.2,38.5517,38.1176,38.625,36.2414,37.5,37.9375,37.0588,37.5909,38.3871,37.7059,36.6522,37.6538,38.3684,36.7143,38.7059,37.5455,38.3889,38.2143,38.3043,38.3,36.1818,36.9,37.4348,38.4348,37.24,37.375,38.3125,36.8,38.7273,36.7838,34.7333,37.1111,37.4783,37.4,37.7143,36.7647,37.1935,36.35,37.95,37.3448,37.6562,38.6111,37.5909,37.375,38.1579,38.3846,34.4667,36.8947,37.5,36.1538,38.0667,37.5333,37.6,35.4348,35.9474,37.7059,37.3333,37.5263,37.8,38.5,36.5652,34.4211,36.5882,37.069,37.95,37.1667,38,36.7857,38.6154,35.25,37.5714,35.5556,36.8519,37.8571,36.6111,36.8333,37.1154,36.84,37.9231,35.2381,37.44,36.6765,36.8696,37.2258,36.08,34.8571,38,37.8462,34.8947,37.7917,35.9545,36.3125,37.0909,36.1739,35.8621,36.0435,35.6129,36,32,34.4643,33.5312,36.9474,36.9643,35.2963,36.1923,37.8333,36.1429,34.2941,33.9,34.1538,34.75,35.1429,34.75,33.5333,35.9677,35.4857,33.9667,36.5,33.7857,35.5429,35.871,37.1111,33.6071,35.9333,33.871,35.5135,35.3913,30.4,34.8571,35.5,35.9375,34.0741,30.9091,36.3913,33.1562,32.8,34.5385,30.8125,34,32.1613,35.6296,32,32.963,34.2564,31.5,33.3226,30.72,34.5926,34.1154,34.1379,33.6364,33.8276,33.087,33.4412,34.0435,33.2581,34.32,30.8485,31.4643,34,33.75,31.4,34.0769,32.3103,33.8889,32.2895,30.5217,30.4,33.0909,32.4615,31.5,30.5185,29.1786,31.2424,31.0417,31.675,31.8286,34.2069,33.6,30.8077,33.1429,33.2143,29.5926,33.9,30.3421,29.9804,30.56,32.8,30.6471,29.6207,30.4722,29.25,26.25,28.8378,30.3171,31.3448,29.125,20.4138], + "C":[28.9,31.1333,31.625,31.2,32.6316,34.8,37,35,35.7812,35.7059,34,36.4,37.5,37.1739,36.68,37.8182,36.9091,37.0741,37.9167,35.2727,37.875,37.0625,37.375,37.0556,38.5,38.8125,38.3684,38.3636,38.2222,37.8571,38.1667,38.4348,38.3333,38.15,38.0769,38.2174,37,38.4333,37.2222,37.4737,36.8421,37.8235,37.1429,36.8421,38,37.7826,38.1923,36.9032,37.4815,37.5,37.3704,38.4,37.9643,37.1,38.3,38.0526,38.1304,37.1212,38.0833,38.2222,36.6552,35.8696,38.1429,37.6429,38.1304,37.4615,37.9231,37.68,36.7,37.6,38.2222,37.4062,38.037,37.7647,38.3077,38.2188,38.125,38.24,37.2609,37.1154,37.76,36.6111,37.1429,36.8276,38.2083,37.3636,38.2609,37.4062,38.0417,36.9474,38,38,37.5833,37.15,37.8108,37.84,38.64,37.5,38.0286,37.2381,35.7742,36.4211,37.4348,36.9355,36.5333,38.3636,38.3947,37.8148,38.0312,37.6129,38.2286,37.2759,38.3784,36.3704,37.625,35.05,37.6818,36.625,37.0556,37.44,36.0938,36.7241,37.1463,38.0882,37.9643,36.2414,37.125,37.4643,36.28,36.8421,37.6757,35.8485,36.9688,35.5938,37.1154,36.5926,38,36.4483,35.8333,35,36.6667,36.2069,35.7895,36.6129,37.9615,37.1053,35.2857,35.2857,37,36.0333,35.08,36.9474,35.2,36.8235,35.2941,36.9565,37.037,37.2308,37.5294,37,36.6667,35.8929,36.6316,35.5909,36.7059,35.8788,36.2857,36.7917,35.88,36.5217,35.5833,36.6,36.0952,33.25,35.8421,36.875,33.8125,35.4348,37.4706,35.4737,35.6364,34.8235,35.4091,34.625,34.2581,33.8929,32.3636,33.9333,36.2222,33.2593,34.3846,32.9655,34.04,33.697,35.8889,32.7308,31.25,34.6667,33.4091,33.04,32.6667,31.6667,35.25,34.5926,34.2143,31.2381,32.1818,33.4138,34.8276,27.2083,31.1333,33.7419,32.7895,31.7368,36.4545,27.3889,32.68,29.15,32.2,32.5238,30.9333,31.2,30.6667,30.2692,29.92,31.4444,31.087,28.08,30.8824,32.1034,31.7143,32.8,30.1053,31.087,29.08,33.4615,30.8182,28.4,30,28.76,28.2593,29.6087,30.9565,28.16,29.35,30.7429,27.9524,30.3,26.95,30.8261,20.3478], + "G":[30.3667,32,31.9091,32.6154,31,35.2727,34.3448,35.2727,32.4545,35.6842,36.2222,35.55,37.9444,37.76,37.68,36.6154,36.0952,36.8182,37,37,37.2857,36.6842,38.1538,37.7692,37.6111,38.4615,38.0769,37.7586,38.2188,38.3043,38.3846,37.5294,38.4615,38.3333,38.1562,36.75,38.2,37.625,37.8125,37.1304,38.2353,36.5,37.6667,37.4348,38.5238,37.2632,37.8125,37.4,38.4286,38.5882,37.2667,37.2778,36.6774,37.0667,36,36.3889,37.6,36.7222,35.5625,38.087,38.1739,37.15,37.619,38.1429,37.7143,36.56,36.8889,37.8889,37.5625,37.3333,36.9474,37.5882,36.8889,36.3529,36.9048,37.6316,36.6522,36.5625,37.6667,36.2222,37.1176,37.9394,38.1429,37.7619,36.8,37.9167,35.1304,36.5862,36.4375,34.5714,37.5,37.4571,36.4375,36.3333,36.5294,37.4545,37.8333,36.75,37.913,37.9565,36.381,36.4074,36.1739,37.5,37.5,35.4583,36.15,37.0833,36.4815,36.0417,37.7143,37.5294,36.4348,36.3548,35.6538,35.8857,37.5556,36.0278,35.125,36.0526,36.6667,36.3043,37.8,36.2759,34.48,36,35.6296,34.9583,37.4815,35.8696,36.5185,35.1176,37.1071,36.6667,34.2105,34.6667,36.3077,35.6667,35.6897,35.7917,37.1852,36,36.5333,35.7826,35.3158,36.4118,36.1515,36.08,33.4194,34.8,36.4242,35.4286,34.2647,35.2692,34.3846,35.4643,35.1579,35.5238,33.9394,34.8636,35.3617,36.069,34.5882,35.8,35.3243,36.4194,36.68,33.7586,36,34.6207,35.5294,33.6,31.7826,33.3939,33.1786,33.44,34.5862,33.72,34.55,34.9412,34.1562,32.7826,34.2759,34.7576,31.4545,33.2581,33,33.4167,34.1707,34.4828,33.68,32.375,31.913,30.4,33.9583,30.5789,35.4,33.1389,32.2692,31.7586,32.9677,32.6923,32.8462,32.7188,30.52,33.5556,33.15,32.2593,31.0667,32.3667,32.2258,32.4783,35.037,32.75,32.9545,34.1111,30.4167,35.9,35.4444,31.375,33,31.3214,31.4333,32.8077,32.4138,30.3667,30.9048,32.9545,31.4706,33.3636,32.9545,31.8333,32.6154,30.381,32.7727,33.85,32.5,34.0476,31.8667,29.8421,30.4375,27.3333,30.56,27.5,27.3333,27.75,30.2,30,27.9091,27.3529,22.5], + "mean":[30.9091,32.0606,31.9192,32.1919,32.101,35.7172,35.7576,35.9192,34.9899,35.6465,35.3939,36.1717,37.7273,37.3838,37.2626,37.2828,37.202,37.1212,37.2727,36.8889,37.1111,36.7576,37.798,37.6263,38.3131,38.1414,37.9596,37.7879,37.8485,37.8384,38.2121,38.3636,38.2424,38.202,38.0404,37.5152,37.6667,38.1111,37.4444,37.6566,37.4242,37.2525,37.2828,37.596,37.4747,37.6566,38.0303,37.4242,37.9192,38.0202,38.0101,37.9697,37.5152,37.4444,37.8182,37.3737,37.5354,37.3838,37.7071,37.9798,37.6364,37.1818,38.0303,37.5354,38.0606,37.5859,37.1515,37.899,37.4949,37.9596,37.7677,37.8788,37.5354,36.8283,37.2929,37.8889,37.6364,37.5253,37.7273,37.2121,36.9596,37.4444,36.6667,36.8586,36.8081,37.4646,37.1717,37.4444,37.4141,36.404,37.1111,37.6263,37.3636,37.3939,37.5455,37.8384,38.1515,37.404,38.1111,36.4848,36.5152,37,36.5051,37.5556,37.3838,37.2626,37.303,37.4242,37.3838,36.8081,37.7273,37.4141,37.5354,36.5051,36.4444,36.0303,37.4343,36.8889,36.5152,37.1515,36.2929,37.2626,37.0404,37.3333,35.5859,36.1919,36.7172,36.1515,36.9899,36.3636,37.1515,36.5859,36.3131,36.6869,36.1717,36.0909,37.1515,36.1313,35.4848,36.3232,36.7475,35.7677,36.4747,36.0606,36.2929,36.5253,36.1313,35.9697,35.5556,35.9798,35.3535,34.303,34.4646,35.303,35.8081,36.2424,36.2626,36.6566,36.1515,36.4141,35.303,34.8081,35.5556,35.6869,35.596,35.9798,35.202,35.7879,35.2525,34.9596,35.4444,34.7576,34.5152,33.6364,34.4747,34.4444,35.3535,34.7071,35.5758,34.7172,34.2525,34.2323,35.0808,34.5051,33.9495,33.1717,33.7677,33.3838,34.3838,32.9697,33.5556,33.2424,32.4646,34.0101,33.5051,32.5051,33.8485,32.9798,32.6869,31.7778,33.0404,32.9091,32.8081,33.798,33.3131,33,32.6566,32.8283,32.7576,31.202,31.2323,32.1414,33.7576,33.1818,32.2626,32.2121,31.7475,32.6364,32.5253,32.2727,31.2525,31.4444,31.3939,31.7677,30.8182,30.3434,30.7172,30.2121,30.899,32.0404,32.2323,32.0303,30.8586,30.7172,31.5354,31.7172,32.2727,30.1818,28.9495,29.5354,29.9596,29.303,28.7374,29.2424,28.3232,28.4444,29.1616,29.6364,29.4343,28.8182,20.1919] + }, + "content_curves": { + "A":[0.313131,0.313131,0.363636,0.222222,0.444444,0.424242,0.333333,0.474747,0.242424,0.343434,0.232323,0.313131,0.292929,0.191919,0.282828,0.30303,0.232323,0.30303,0.282828,0.30303,0.343434,0.353535,0.383838,0.373737,0.373737,0.434343,0.323232,0.313131,0.222222,0.252525,0.373737,0.343434,0.282828,0.363636,0.353535,0.383838,0.363636,0.232323,0.222222,0.262626,0.353535,0.363636,0.383838,0.262626,0.383838,0.30303,0.383838,0.181818,0.333333,0.353535,0.333333,0.383838,0.252525,0.20202,0.282828,0.383838,0.222222,0.222222,0.313131,0.323232,0.252525,0.252525,0.40404,0.272727,0.363636,0.292929,0.343434,0.393939,0.252525,0.40404,0.30303,0.272727,0.252525,0.262626,0.454545,0.252525,0.292929,0.333333,0.282828,0.30303,0.20202,0.373737,0.272727,0.343434,0.373737,0.20202,0.333333,0.242424,0.262626,0.212121,0.272727,0.232323,0.30303,0.20202,0.272727,0.30303,0.363636,0.242424,0.282828,0.252525,0.282828,0.272727,0.272727,0.272727,0.343434,0.282828,0.181818,0.292929,0.232323,0.232323,0.242424,0.383838,0.252525,0.181818,0.30303,0.272727,0.30303,0.272727,0.212121,0.282828,0.292929,0.212121,0.222222,0.151515,0.282828,0.242424,0.272727,0.292929,0.292929,0.313131,0.10101,0.232323,0.181818,0.151515,0.20202,0.313131,0.222222,0.212121,0.191919,0.272727,0.161616,0.222222,0.262626,0.232323,0.222222,0.242424,0.151515,0.171717,0.212121,0.181818,0.222222,0.151515,0.222222,0.242424,0.181818,0.20202,0.262626,0.262626,0.191919,0.191919,0.141414,0.222222,0.20202,0.292929,0.171717,0.191919,0.232323,0.151515,0.151515,0.171717,0.212121,0.262626,0.20202,0.191919,0.343434,0.141414,0.242424,0.20202,0.252525,0.232323,0.252525,0.383838,0.181818,0.181818,0.191919,0.181818,0.262626,0.282828,0.20202,0.171717,0.323232,0.313131,0.20202,0.191919,0.212121,0.272727,0.242424,0.242424,0.20202,0.20202,0.232323,0.232323,0.282828,0.181818,0.171717,0.282828,0.232323,0.20202,0.242424,0.20202,0.20202,0.171717,0.242424,0.161616,0.20202,0.282828,0.212121,0.232323,0.232323,0.313131,0.282828,0.181818,0.252525,0.191919,0.181818,0.232323,0.222222,0.282828,0.252525,0.242424,0.20202,0.252525,0.282828,0.20202,0.242424,0.262626,0.272727,0.20202,0.181818,0.30303,0.212121,0.272727,0.222222,0.222222,0.323232,0.161616,0.212121,0.222222,0.282828,0.191919,0.212121], + "T":[0.181818,0.444444,0.282828,0.444444,0.262626,0.151515,0.262626,0.191919,0.212121,0.292929,0.333333,0.232323,0.383838,0.323232,0.212121,0.323232,0.333333,0.20202,0.212121,0.393939,0.282828,0.131313,0.323232,0.313131,0.242424,0.272727,0.222222,0.282828,0.272727,0.30303,0.252525,0.252525,0.313131,0.222222,0.191919,0.222222,0.222222,0.222222,0.252525,0.313131,0.282828,0.242424,0.161616,0.313131,0.212121,0.272727,0.191919,0.252525,0.252525,0.212121,0.242424,0.232323,0.151515,0.292929,0.343434,0.242424,0.292929,0.262626,0.161616,0.171717,0.222222,0.313131,0.171717,0.232323,0.262626,0.191919,0.212121,0.171717,0.222222,0.181818,0.141414,0.232323,0.20202,0.222222,0.20202,0.232323,0.232323,0.252525,0.242424,0.161616,0.20202,0.111111,0.373737,0.151515,0.181818,0.232323,0.20202,0.141414,0.171717,0.313131,0.20202,0.20202,0.292929,0.323232,0.181818,0.222222,0.0808081,0.191919,0.131313,0.30303,0.191919,0.262626,0.262626,0.151515,0.151515,0.252525,0.232323,0.191919,0.171717,0.212121,0.191919,0.151515,0.141414,0.232323,0.191919,0.171717,0.292929,0.20202,0.181818,0.272727,0.141414,0.262626,0.161616,0.212121,0.181818,0.272727,0.212121,0.181818,0.181818,0.262626,0.252525,0.262626,0.212121,0.252525,0.343434,0.232323,0.313131,0.252525,0.212121,0.191919,0.262626,0.191919,0.242424,0.222222,0.323232,0.222222,0.232323,0.292929,0.232323,0.313131,0.191919,0.373737,0.282828,0.323232,0.383838,0.282828,0.272727,0.262626,0.30303,0.282828,0.171717,0.20202,0.262626,0.282828,0.282828,0.161616,0.30303,0.313131,0.353535,0.30303,0.20202,0.282828,0.353535,0.313131,0.181818,0.282828,0.30303,0.313131,0.373737,0.232323,0.20202,0.212121,0.30303,0.161616,0.272727,0.222222,0.232323,0.323232,0.20202,0.262626,0.161616,0.232323,0.313131,0.272727,0.363636,0.272727,0.393939,0.242424,0.313131,0.252525,0.272727,0.262626,0.292929,0.222222,0.292929,0.232323,0.343434,0.232323,0.313131,0.252525,0.333333,0.282828,0.292929,0.323232,0.353535,0.262626,0.292929,0.363636,0.383838,0.232323,0.20202,0.333333,0.262626,0.282828,0.272727,0.282828,0.333333,0.242424,0.40404,0.353535,0.292929,0.353535,0.262626,0.353535,0.282828,0.272727,0.30303,0.383838,0.515152,0.252525,0.353535,0.343434,0.292929,0.363636,0.323232,0.282828,0.373737,0.414141,0.292929,0.40404,0.292929], + "C":[0.20202,0.151515,0.242424,0.20202,0.191919,0.20202,0.111111,0.111111,0.323232,0.171717,0.161616,0.252525,0.141414,0.232323,0.252525,0.111111,0.222222,0.272727,0.242424,0.111111,0.161616,0.323232,0.161616,0.181818,0.20202,0.161616,0.191919,0.111111,0.181818,0.212121,0.242424,0.232323,0.272727,0.20202,0.131313,0.232323,0.212121,0.30303,0.363636,0.191919,0.191919,0.171717,0.212121,0.191919,0.191919,0.232323,0.262626,0.313131,0.272727,0.262626,0.272727,0.20202,0.282828,0.20202,0.20202,0.191919,0.232323,0.333333,0.363636,0.272727,0.292929,0.232323,0.212121,0.282828,0.232323,0.262626,0.262626,0.252525,0.20202,0.20202,0.363636,0.323232,0.272727,0.343434,0.131313,0.323232,0.242424,0.252525,0.232323,0.262626,0.252525,0.181818,0.282828,0.292929,0.242424,0.444444,0.232323,0.323232,0.242424,0.191919,0.323232,0.212121,0.242424,0.20202,0.373737,0.252525,0.252525,0.323232,0.353535,0.212121,0.313131,0.191919,0.232323,0.313131,0.30303,0.222222,0.383838,0.272727,0.323232,0.313131,0.353535,0.292929,0.373737,0.272727,0.242424,0.20202,0.222222,0.161616,0.363636,0.252525,0.323232,0.292929,0.414141,0.343434,0.282828,0.292929,0.242424,0.282828,0.252525,0.191919,0.373737,0.333333,0.323232,0.323232,0.262626,0.272727,0.20202,0.292929,0.30303,0.292929,0.30303,0.292929,0.191919,0.313131,0.262626,0.191919,0.282828,0.282828,0.242424,0.30303,0.252525,0.191919,0.151515,0.171717,0.171717,0.232323,0.272727,0.262626,0.171717,0.30303,0.212121,0.282828,0.191919,0.222222,0.171717,0.333333,0.212121,0.242424,0.252525,0.232323,0.242424,0.20202,0.212121,0.161616,0.191919,0.323232,0.161616,0.232323,0.171717,0.191919,0.222222,0.171717,0.222222,0.323232,0.313131,0.282828,0.111111,0.151515,0.181818,0.272727,0.262626,0.292929,0.252525,0.333333,0.181818,0.262626,0.161616,0.151515,0.222222,0.252525,0.181818,0.242424,0.161616,0.272727,0.282828,0.212121,0.222222,0.292929,0.292929,0.242424,0.151515,0.313131,0.191919,0.191919,0.222222,0.181818,0.252525,0.20202,0.20202,0.212121,0.30303,0.20202,0.181818,0.262626,0.252525,0.181818,0.232323,0.252525,0.171717,0.292929,0.282828,0.151515,0.191919,0.232323,0.252525,0.262626,0.222222,0.20202,0.151515,0.252525,0.272727,0.232323,0.232323,0.252525,0.20202,0.353535,0.212121,0.20202,0.20202,0.232323,0.232323], + "G":[0.30303,0.0909091,0.111111,0.131313,0.10101,0.222222,0.292929,0.222222,0.222222,0.191919,0.272727,0.20202,0.181818,0.252525,0.252525,0.262626,0.212121,0.222222,0.262626,0.191919,0.212121,0.191919,0.131313,0.131313,0.181818,0.131313,0.262626,0.292929,0.323232,0.232323,0.131313,0.171717,0.131313,0.212121,0.323232,0.161616,0.20202,0.242424,0.161616,0.232323,0.171717,0.222222,0.242424,0.232323,0.212121,0.191919,0.161616,0.252525,0.141414,0.171717,0.151515,0.181818,0.313131,0.30303,0.171717,0.181818,0.252525,0.181818,0.161616,0.232323,0.232323,0.20202,0.212121,0.212121,0.141414,0.252525,0.181818,0.181818,0.323232,0.212121,0.191919,0.171717,0.272727,0.171717,0.212121,0.191919,0.232323,0.161616,0.242424,0.272727,0.343434,0.333333,0.0707071,0.212121,0.20202,0.121212,0.232323,0.292929,0.323232,0.282828,0.20202,0.353535,0.161616,0.272727,0.171717,0.222222,0.30303,0.242424,0.232323,0.232323,0.212121,0.272727,0.232323,0.262626,0.20202,0.242424,0.20202,0.242424,0.272727,0.242424,0.212121,0.171717,0.232323,0.313131,0.262626,0.353535,0.181818,0.363636,0.242424,0.191919,0.242424,0.232323,0.20202,0.292929,0.252525,0.191919,0.272727,0.242424,0.272727,0.232323,0.272727,0.171717,0.282828,0.272727,0.191919,0.181818,0.262626,0.242424,0.292929,0.242424,0.272727,0.292929,0.30303,0.232323,0.191919,0.343434,0.333333,0.252525,0.313131,0.20202,0.333333,0.282828,0.343434,0.262626,0.262626,0.282828,0.191919,0.212121,0.333333,0.222222,0.474747,0.292929,0.343434,0.20202,0.373737,0.313131,0.252525,0.292929,0.242424,0.292929,0.343434,0.252525,0.232323,0.333333,0.282828,0.252525,0.292929,0.252525,0.20202,0.343434,0.323232,0.232323,0.292929,0.333333,0.222222,0.313131,0.393939,0.242424,0.414141,0.292929,0.252525,0.161616,0.232323,0.20202,0.242424,0.191919,0.20202,0.363636,0.262626,0.292929,0.313131,0.262626,0.262626,0.323232,0.252525,0.272727,0.20202,0.272727,0.151515,0.30303,0.313131,0.232323,0.272727,0.323232,0.222222,0.272727,0.242424,0.20202,0.181818,0.242424,0.212121,0.282828,0.30303,0.262626,0.292929,0.30303,0.212121,0.222222,0.171717,0.111111,0.222222,0.242424,0.262626,0.212121,0.222222,0.20202,0.20202,0.212121,0.151515,0.191919,0.161616,0.151515,0.252525,0.161616,0.151515,0.20202,0.20202,0.161616,0.222222,0.171717,0.262626], + "N":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0], + "GC":[0.505051,0.242424,0.353535,0.333333,0.292929,0.424242,0.40404,0.333333,0.545455,0.363636,0.434343,0.454545,0.323232,0.484848,0.505051,0.373737,0.434343,0.494949,0.505051,0.30303,0.373737,0.515152,0.292929,0.313131,0.383838,0.292929,0.454545,0.40404,0.505051,0.444444,0.373737,0.40404,0.40404,0.414141,0.454545,0.393939,0.414141,0.545455,0.525253,0.424242,0.363636,0.393939,0.454545,0.424242,0.40404,0.424242,0.424242,0.565657,0.414141,0.434343,0.424242,0.383838,0.59596,0.505051,0.373737,0.373737,0.484848,0.515152,0.525253,0.505051,0.525253,0.434343,0.424242,0.494949,0.373737,0.515152,0.444444,0.434343,0.525253,0.414141,0.555556,0.494949,0.545455,0.515152,0.343434,0.515152,0.474747,0.414141,0.474747,0.535354,0.59596,0.515152,0.353535,0.505051,0.444444,0.565657,0.464646,0.616162,0.565657,0.474747,0.525253,0.565657,0.40404,0.474747,0.545455,0.474747,0.555556,0.565657,0.585859,0.444444,0.525253,0.464646,0.464646,0.575758,0.505051,0.464646,0.585859,0.515152,0.59596,0.555556,0.565657,0.464646,0.606061,0.585859,0.505051,0.555556,0.40404,0.525253,0.606061,0.444444,0.565657,0.525253,0.616162,0.636364,0.535354,0.484848,0.515152,0.525253,0.525253,0.424242,0.646465,0.505051,0.606061,0.59596,0.454545,0.454545,0.464646,0.535354,0.59596,0.535354,0.575758,0.585859,0.494949,0.545455,0.454545,0.535354,0.616162,0.535354,0.555556,0.505051,0.585859,0.474747,0.494949,0.434343,0.434343,0.515152,0.464646,0.474747,0.505051,0.525253,0.686869,0.575758,0.535354,0.424242,0.545455,0.646465,0.464646,0.535354,0.494949,0.525253,0.585859,0.454545,0.444444,0.494949,0.474747,0.575758,0.454545,0.484848,0.373737,0.535354,0.545455,0.40404,0.515152,0.656566,0.535354,0.59596,0.505051,0.393939,0.59596,0.565657,0.515152,0.454545,0.484848,0.535354,0.424242,0.454545,0.363636,0.515152,0.484848,0.545455,0.494949,0.505051,0.424242,0.59596,0.535354,0.484848,0.424242,0.565657,0.444444,0.545455,0.464646,0.545455,0.464646,0.515152,0.444444,0.454545,0.494949,0.40404,0.383838,0.454545,0.515152,0.484848,0.484848,0.525253,0.545455,0.484848,0.444444,0.474747,0.343434,0.40404,0.505051,0.393939,0.454545,0.444444,0.474747,0.464646,0.424242,0.414141,0.30303,0.444444,0.434343,0.383838,0.484848,0.414141,0.353535,0.555556,0.414141,0.363636,0.424242,0.40404,0.494949] + }, + "kmer_count": { + "AAAAA":26, "AAAAT":54, "AAAAC":36, "AAAAG":0, "AAATA":174, "AAATT":1, "AAATC":0, "AAATG":52, "AAACA":3, "AAACT":1, "AAACC":33, "AAACG":0, "AAAGA":50, "AAAGT":22, "AAAGC":1, "AAAGG":0, + "AATAA":85, "AATAT":48, "AATAC":53, "AATAG":134, "AATTA":32, "AATTT":1, "AATTC":2, "AATTG":3, "AATCA":47, "AATCT":12, "AATCC":0, "AATCG":1, "AATGA":0, "AATGT":0, "AATGC":105, "AATGG":1, + "AACAA":3, "AACAT":8, "AACAC":28, "AACAG":1, "AACTA":1, "AACTT":0, "AACTC":0, "AACTG":22, "AACCA":58, "AACCT":35, "AACCC":2, "AACCG":0, "AACGA":0, "AACGT":72, "AACGC":0, "AACGG":2, + "AAGAA":0, "AAGAT":0, "AAGAC":94, "AAGAG":0, "AAGTA":41, "AAGTT":1, "AAGTC":0, "AAGTG":23, "AAGCA":13, "AAGCT":1, "AAGCC":0, "AAGCG":2, "AAGGA":0, "AAGGT":0, "AAGGC":17, "AAGGG":38, + "ATAAA":74, "ATAAT":43, "ATAAC":6, "ATAAG":44, "ATATA":0, "ATATT":49, "ATATC":3, "ATATG":1, "ATACA":32, "ATACT":59, "ATACC":56, "ATACG":0, "ATAGA":52, "ATAGT":0, "ATAGC":82, "ATAGG":150, + "ATTAA":92, "ATTAT":38, "ATTAC":15, "ATTAG":0, "ATTTA":94, "ATTTT":46, "ATTTC":1, "ATTTG":46, "ATTCA":3, "ATTCT":2, "ATTCC":35, "ATTCG":0, "ATTGA":37, "ATTGT":3, "ATTGC":47, "ATTGG":0, + "ATCAA":50, "ATCAT":0, "ATCAC":134, "ATCAG":0, "ATCTA":0, "ATCTT":0, "ATCTC":34, "ATCTG":76, "ATCCA":52, "ATCCT":28, "ATCCC":0, "ATCCG":28, "ATCGA":0, "ATCGT":50, "ATCGC":74, "ATCGG":2, + "ATGAA":0, "ATGAT":1, "ATGAC":23, "ATGAG":44, "ATGTA":0, "ATGTT":26, "ATGTC":102, "ATGTG":1, "ATGCA":99, "ATGCT":57, "ATGCC":12, "ATGCG":0, "ATGGA":97, "ATGGT":0, "ATGGC":1, "ATGGG":1, + "ACAAA":2, "ACAAT":0, "ACAAC":4, "ACAAG":13, "ACATA":61, "ACATT":0, "ACATC":95, "ACATG":0, "ACACA":46, "ACACT":25, "ACACC":55, "ACACG":38, "ACAGA":53, "ACAGT":3, "ACAGC":2, "ACAGG":56, + "ACTAA":23, "ACTAT":1, "ACTAC":1, "ACTAG":1, "ACTTA":7, "ACTTT":20, "ACTTC":33, "ACTTG":11, "ACTCA":46, "ACTCT":0, "ACTCC":0, "ACTCG":0, "ACTGA":0, "ACTGT":23, "ACTGC":53, "ACTGG":1, + "ACCAA":54, "ACCAT":0, "ACCAC":46, "ACCAG":11, "ACCTA":54, "ACCTT":1, "ACCTC":2, "ACCTG":59, "ACCCA":2, "ACCCT":113, "ACCCC":53, "ACCCG":0, "ACCGA":0, "ACCGT":0, "ACCGC":0, "ACCGG":0, + "ACGAA":53, "ACGAT":44, "ACGAC":0, "ACGAG":19, "ACGTA":38, "ACGTT":52, "ACGTC":1, "ACGTG":35, "ACGCA":2, "ACGCT":46, "ACGCC":1, "ACGCG":45, "ACGGA":1, "ACGGT":1, "ACGGC":0, "ACGGG":46, + "AGAAA":0, "AGAAT":0, "AGAAC":0, "AGAAG":0, "AGATA":53, "AGATT":0, "AGATC":0, "AGATG":11, "AGACA":94, "AGACT":18, "AGACC":52, "AGACG":98, "AGAGA":0, "AGAGT":1, "AGAGC":52, "AGAGG":0, + "AGTAA":24, "AGTAT":67, "AGTAC":0, "AGTAG":18, "AGTTA":0, "AGTTT":0, "AGTTC":4, "AGTTG":0, "AGTCA":0, "AGTCT":0, "AGTCC":1, "AGTCG":0, "AGTGA":18, "AGTGT":5, "AGTGC":1, "AGTGG":52, + "AGCAA":0, "AGCAT":61, "AGCAC":44, "AGCAG":0, "AGCTA":18, "AGCTT":0, "AGCTC":98, "AGCTG":5, "AGCCA":0, "AGCCT":0, "AGCCC":54, "AGCCG":45, "AGCGA":1, "AGCGT":53, "AGCGC":0, "AGCGG":0, + "AGGAA":60, "AGGAT":44, "AGGAC":1, "AGGAG":0, "AGGTA":1, "AGGTT":32, "AGGTC":46, "AGGTG":39, "AGGCA":45, "AGGCT":2, "AGGCC":1, "AGGCG":25, "AGGGA":1, "AGGGT":134, "AGGGC":2, "AGGGG":39, + "TAAAA":33, "TAAAT":118, "TAAAC":0, "TAAAG":21, "TAATA":128, "TAATT":32, "TAATC":1, "TAATG":1, "TAACA":24, "TAACT":1, "TAACC":46, "TAACG":1, "TAAGA":43, "TAAGT":24, "TAAGC":0, "TAAGG":56, + "TATAA":0, "TATAT":1, "TATAC":30, "TATAG":0, "TATTA":99, "TATTT":140, "TATTC":1, "TATTG":36, "TATCA":45, "TATCT":42, "TATCC":29, "TATCG":75, "TATGA":25, "TATGT":79, "TATGC":15, "TATGG":0, + "TACAA":14, "TACAT":0, "TACAC":29, "TACAG":15, "TACTA":6, "TACTT":38, "TACTC":0, "TACTG":54, "TACCA":53, "TACCT":5, "TACCC":0, "TACCG":0, "TACGA":0, "TACGT":15, "TACGC":0, "TACGG":0, + "TAGAA":0, "TAGAT":0, "TAGAC":53, "TAGAG":0, "TAGTA":24, "TAGTT":0, "TAGTC":0, "TAGTG":1, "TAGCA":46, "TAGCT":19, "TAGCC":36, "TAGCG":0, "TAGGA":61, "TAGGT":71, "TAGGC":2, "TAGGG":105, + "TTAAA":41, "TTAAT":86, "TTAAC":62, "TTAAG":39, "TTATA":30, "TTATT":75, "TTATC":20, "TTATG":38, "TTACA":12, "TTACT":8, "TTACC":1, "TTACG":0, "TTAGA":0, "TTAGT":22, "TTAGC":2, "TTAGG":33, + "TTTAA":39, "TTTAT":49, "TTTAC":0, "TTTAG":56, "TTTTA":28, "TTTTT":2, "TTTTC":46, "TTTTG":0, "TTTCA":0, "TTTCT":0, "TTTCC":0, "TTTCG":47, "TTTGA":40, "TTTGT":0, "TTTGC":0, "TTTGG":46, + "TTCAA":15, "TTCAT":2, "TTCAC":3, "TTCAG":32, "TTCTA":0, "TTCTT":0, "TTCTC":0, "TTCTG":12, "TTCCA":0, "TTCCT":66, "TTCCC":40, "TTCCG":1, "TTCGA":0, "TTCGT":47, "TTCGC":26, "TTCGG":0, + "TTGAA":41, "TTGAT":38, "TTGAC":1, "TTGAG":1, "TTGTA":1, "TTGTT":3, "TTGTC":0, "TTGTG":2, "TTGCA":2, "TTGCT":1, "TTGCC":0, "TTGCG":46, "TTGGA":0, "TTGGT":45, "TTGGC":1, "TTGGG":11, + "TCAAA":50, "TCAAT":15, "TCAAC":0, "TCAAG":1, "TCATA":32, "TCATT":1, "TCATC":29, "TCATG":0, "TCACA":46, "TCACT":4, "TCACC":46, "TCACG":88, "TCAGA":0, "TCAGT":0, "TCAGC":0, "TCAGG":32, + "TCTAA":0, "TCTAT":46, "TCTAC":0, "TCTAG":0, "TCTTA":68, "TCTTT":39, "TCTTC":8, "TCTTG":0, "TCTCA":0, "TCTCT":30, "TCTCC":67, "TCTCG":66, "TCTGA":2, "TCTGT":49, "TCTGC":8, "TCTGG":77, + "TCCAA":2, "TCCAT":96, "TCCAC":3, "TCCAG":53, "TCCTA":70, "TCCTT":0, "TCCTC":0, "TCCTG":37, "TCCCA":0, "TCCCT":0, "TCCCC":39, "TCCCG":52, "TCCGA":48, "TCCGT":0, "TCCGC":0, "TCCGG":55, + "TCGAA":0, "TCGAT":0, "TCGAC":0, "TCGAG":0, "TCGTA":12, "TCGTT":1, "TCGTC":46, "TCGTG":49, "TCGCA":118, "TCGCT":0, "TCGCC":27, "TCGCG":53, "TCGGA":7, "TCGGT":0, "TCGGC":1, "TCGGG":2, + "TGAAA":2, "TGAAT":0, "TGAAC":55, "TGAAG":18, "TGATA":50, "TGATT":37, "TGATC":55, "TGATG":45, "TGACA":1, "TGACT":1, "TGACC":23, "TGACG":0, "TGAGA":0, "TGAGT":52, "TGAGC":1, "TGAGG":46, + "TGTAA":31, "TGTAT":20, "TGTAC":0, "TGTAG":1, "TGTTA":7, "TGTTT":0, "TGTTC":27, "TGTTG":0, "TGTCA":1, "TGTCT":112, "TGTCC":10, "TGTCG":51, "TGTGA":53, "TGTGT":4, "TGTGC":44, "TGTGG":33, + "TGCAA":2, "TGCAT":99, "TGCAC":98, "TGCAG":1, "TGCTA":53, "TGCTT":8, "TGCTC":53, "TGCTG":3, "TGCCA":0, "TGCCT":33, "TGCCC":0, "TGCCG":12, "TGCGA":136, "TGCGT":1, "TGCGC":2, "TGCGG":0, + "TGGAA":0, "TGGAT":44, "TGGAC":0, "TGGAG":99, "TGGTA":45, "TGGTT":83, "TGGTC":0, "TGGTG":0, "TGGCA":1, "TGGCT":2, "TGGCC":0, "TGGCG":1, "TGGGA":1, "TGGGT":1, "TGGGC":34, "TGGGG":57, + "CAAAA":2, "CAAAT":52, "CAAAC":1, "CAAAG":50, "CAATA":15, "CAATT":2, "CAATC":0, "CAATG":53, "CAACA":5, "CAACT":1, "CAACC":2, "CAACG":0, "CAAGA":0, "CAAGT":1, "CAAGC":14, "CAAGG":0, + "CATAA":39, "CATAT":1, "CATAC":7, "CATAG":53, "CATTA":13, "CATTT":47, "CATTC":1, "CATTG":46, "CATCA":43, "CATCT":53, "CATCC":29, "CATCG":50, "CATGA":0, "CATGT":0, "CATGC":46, "CATGG":53, + "CACAA":1, "CACAT":25, "CACAC":109, "CACAG":46, "CACTA":1, "CACTT":30, "CACTC":46, "CACTG":1, "CACCA":0, "CACCT":22, "CACCC":145, "CACCG":0, "CACGA":63, "CACGT":38, "CACGC":47, "CACGG":46, + "CAGAA":0, "CAGAT":63, "CAGAC":54, "CAGAG":0, "CAGTA":44, "CAGTT":3, "CAGTC":1, "CAGTG":0, "CAGCA":2, "CAGCT":2, "CAGCC":0, "CAGCG":52, "CAGGA":45, "CAGGT":46, "CAGGC":10, "CAGGG":32, + "CTAAA":56, "CTAAT":0, "CTAAC":2, "CTAAG":16, "CTATA":0, "CTATT":109, "CTATC":98, "CTATG":45, "CTACA":15, "CTACT":31, "CTACC":1, "CTACG":20, "CTAGA":0, "CTAGT":1, "CTAGC":0, "CTAGG":0, + "CTTAA":40, "CTTAT":70, "CTTAC":6, "CTTAG":0, "CTTTA":23, "CTTTT":0, "CTTTC":0, "CTTTG":40, "CTTCA":32, "CTTCT":9, "CTTCC":1, "CTTCG":0, "CTTGA":7, "CTTGT":1, "CTTGC":2, "CTTGG":11, + "CTCAA":1, "CTCAT":28, "CTCAC":46, "CTCAG":0, "CTCTA":0, "CTCTT":30, "CTCTC":48, "CTCTG":1, "CTCCA":99, "CTCCT":0, "CTCCC":51, "CTCCG":75, "CTCGA":0, "CTCGT":12, "CTCGC":54, "CTCGG":1, + "CTGAA":18, "CTGAT":1, "CTGAC":1, "CTGAG":1, "CTGTA":51, "CTGTT":0, "CTGTC":74, "CTGTG":53, "CTGCA":1, "CTGCT":7, "CTGCC":33, "CTGCG":52, "CTGGA":46, "CTGGT":30, "CTGGC":2, "CTGGG":45, + "CCAAA":52, "CCAAT":1, "CCAAC":3, "CCAAG":1, "CCATA":7, "CCATT":0, "CCATC":50, "CCATG":46, "CCACA":37, "CCACT":47, "CCACC":0, "CCACG":22, "CCAGA":65, "CCAGT":1, "CCAGC":52, "CCAGG":0, + "CCTAA":35, "CCTAT":119, "CCTAC":63, "CCTAG":0, "CCTTA":40, "CCTTT":1, "CCTTC":0, "CCTTG":1, "CCTCA":28, "CCTCT":2, "CCTCC":1, "CCTCG":0, "CCTGA":21, "CCTGT":93, "CCTGC":32, "CCTGG":0, + "CCCAA":0, "CCCAT":5, "CCCAC":57, "CCCAG":54, "CCCTA":91, "CCCTT":39, "CCCTC":0, "CCCTG":22, "CCCCA":53, "CCCCT":39, "CCCCC":106, "CCCCG":0, "CCCGA":0, "CCCGT":52, "CCCGC":0, "CCCGG":0, + "CCGAA":0, "CCGAT":0, "CCGAC":29, "CCGAG":20, "CCGTA":0, "CCGTT":0, "CCGTC":9, "CCGTG":52, "CCGCA":1, "CCGCT":0, "CCGCC":0, "CCGCG":0, "CCGGA":44, "CCGGT":1, "CCGGC":54, "CCGGG":2, + "CGAAA":53, "CGAAT":15, "CGAAC":9, "CGAAG":1, "CGATA":84, "CGATT":0, "CGATC":0, "CGATG":44, "CGACA":80, "CGACT":1, "CGACC":0, "CGACG":1, "CGAGA":63, "CGAGT":0, "CGAGC":20, "CGAGG":0, + "CGTAA":0, "CGTAT":12, "CGTAC":0, "CGTAG":38, "CGTTA":0, "CGTTT":0, "CGTTC":53, "CGTTG":0, "CGTCA":0, "CGTCT":108, "CGTCC":1, "CGTCG":0, "CGTGA":101, "CGTGT":33, "CGTGC":53, "CGTGG":2, + "CGCAA":54, "CGCAT":0, "CGCAC":23, "CGCAG":45, "CGCTA":0, "CGCTT":1, "CGCTC":1, "CGCTG":45, "CGCCA":0, "CGCCT":28, "CGCCC":1, "CGCCG":1, "CGCGA":46, "CGCGT":53, "CGCGC":0, "CGCGG":0, + "CGGAA":0, "CGGAT":7, "CGGAC":1, "CGGAG":44, "CGGTA":0, "CGGTT":1, "CGGTC":0, "CGGTG":2, "CGGCA":0, "CGGCT":54, "CGGCC":0, "CGGCG":1, "CGGGA":45, "CGGGT":2, "CGGGC":3, "CGGGG":0, + "GAAAA":55, "GAAAT":0, "GAAAC":0, "GAAAG":0, "GAATA":2, "GAATT":1, "GAATC":58, "GAATG":0, "GAACA":8, "GAACT":19, "GAACC":15, "GAACG":73, "GAAGA":0, "GAAGT":18, "GAAGC":1, "GAAGG":0, + "GATAA":40, "GATAT":0, "GATAC":57, "GATAG":98, "GATTA":1, "GATTT":0, "GATTC":36, "GATTG":0, "GATCA":46, "GATCT":2, "GATCC":52, "GATCG":0, "GATGA":44, "GATGT":50, "GATGC":3, "GATGG":45, + "GACAA":1, "GACAT":124, "GACAC":0, "GACAG":52, "GACTA":18, "GACTT":2, "GACTC":0, "GACTG":0, "GACCA":0, "GACCT":54, "GACCC":21, "GACCG":0, "GACGA":53, "GACGT":0, "GACGC":47, "GACGG":0, + "GAGAA":0, "GAGAT":1, "GAGAC":62, "GAGAG":53, "GAGTA":0, "GAGTT":1, "GAGTC":0, "GAGTG":52, "GAGCA":44, "GAGCT":98, "GAGCC":65, "GAGCG":0, "GAGGA":0, "GAGGT":1, "GAGGC":44, "GAGGG":2, + "GTAAA":0, "GTAAT":32, "GTAAC":0, "GTAAG":24, "GTATA":1, "GTATT":45, "GTATC":70, "GTATG":38, "GTACA":0, "GTACT":0, "GTACC":0, "GTACG":0, "GTAGA":1, "GTAGT":0, "GTAGC":15, "GTAGG":55, + "GTTAA":57, "GTTAT":6, "GTTAC":0, "GTTAG":0, "GTTTA":0, "GTTTT":30, "GTTTC":0, "GTTTG":0, "GTTCA":17, "GTTCT":2, "GTTCC":71, "GTTCG":26, "GTTGA":0, "GTTGT":2, "GTTGC":0, "GTTGG":0, + "GTCAA":0, "GTCAT":32, "GTCAC":1, "GTCAG":0, "GTCTA":46, "GTCTT":86, "GTCTC":84, "GTCTG":48, "GTCCA":3, "GTCCT":11, "GTCCC":0, "GTCCG":0, "GTCGA":0, "GTCGT":0, "GTCGC":44, "GTCGG":7, + "GTGAA":18, "GTGAT":151, "GTGAC":0, "GTGAG":53, "GTGTA":0, "GTGTT":5, "GTGTC":1, "GTGTG":79, "GTGCA":98, "GTGCT":52, "GTGCC":0, "GTGCG":41, "GTGGA":0, "GTGGT":53, "GTGGC":0, "GTGGG":36, + "GCAAA":1, "GCAAT":54, "GCAAC":1, "GCAAG":0, "GCATA":0, "GCATT":106, "GCATC":2, "GCATG":53, "GCACA":53, "GCACT":0, "GCACC":67, "GCACG":45, "GCAGA":0, "GCAGT":44, "GCAGC":2, "GCAGG":45, + "GCTAA":17, "GCTAT":87, "GCTAC":2, "GCTAG":0, "GCTTA":1, "GCTTT":2, "GCTTC":0, "GCTTG":9, "GCTCA":1, "GCTCT":47, "GCTCC":156, "GCTCG":1, "GCTGA":0, "GCTGT":11, "GCTGC":0, "GCTGG":45, + "GCCAA":1, "GCCAT":1, "GCCAC":0, "GCCAG":0, "GCCTA":0, "GCCTT":1, "GCCTC":30, "GCCTG":30, "GCCCA":61, "GCCCT":0, "GCCCC":0, "GCCCG":0, "GCCGA":1, "GCCGT":10, "GCCGC":1, "GCCGG":46, + "GCGAA":25, "GCGAT":84, "GCGAC":53, "GCGAG":45, "GCGTA":0, "GCGTT":0, "GCGTC":54, "GCGTG":53, "GCGCA":2, "GCGCT":0, "GCGCC":1, "GCGCG":1, "GCGGA":0, "GCGGT":1, "GCGGC":0, "GCGGG":0, + "GGAAA":0, "GGAAT":46, "GGAAC":51, "GGAAG":0, "GGATA":9, "GGATT":0, "GGATC":44, "GGATG":45, "GGACA":1, "GGACT":0, "GGACC":0, "GGACG":1, "GGAGA":54, "GGAGT":0, "GGAGC":134, "GGAGG":1, + "GGTAA":0, "GGTAT":45, "GGTAC":0, "GGTAG":13, "GGTTA":53, "GGTTT":30, "GGTTC":32, "GGTTG":2, "GGTCA":32, "GGTCT":46, "GGTCC":0, "GGTCG":0, "GGTGA":50, "GGTGT":45, "GGTGC":93, "GGTGG":2, + "GGCAA":0, "GGCAT":1, "GGCAC":0, "GGCAG":45, "GGCTA":35, "GGCTT":3, "GGCTC":53, "GGCTG":3, "GGCCA":1, "GGCCT":2, "GGCCC":4, "GGCCG":0, "GGCGA":24, "GGCGT":0, "GGCGC":2, "GGCGG":1, + "GGGAA":36, "GGGAT":3, "GGGAC":0, "GGGAG":46, "GGGTA":12, "GGGTT":1, "GGGTC":32, "GGGTG":149, "GGGCA":0, "GGGCT":36, "GGGCC":4, "GGGCG":1, "GGGGA":38, "GGGGT":56, "GGGGC":2, "GGGGG":102 + }, + "overrepresented_sequences": { + } + }, + "read1_after_filtering": { + "total_reads": 97, + "total_bases": 22942, + "q20_bases": 21680, + "q30_bases": 20981, + "total_cycles": 251, + "quality_curves": { + "A":[31.4,33,31.9714,32.1429,32.4091,36.439,35.6667,36.0851,35.9167,35.0303,36.0455,36.0333,37.5172,36.8421,37.7037,37.1,37.7727,37.5667,37.6786,36.4667,36.3235,36.4412,38.2432,37.8056,38.4857,38.2439,37.8387,38.3793,38.1905,38.12,38.6111,38.5152,38.4815,37.9706,38.5429,37.5405,38.0571,38.087,37.8636,38.3077,37.0303,38.1389,37.1892,38.36,37.2703,38.2,38.2368,38.1176,38.0312,37.8235,38.5758,38.3784,37.64,36.5556,38.1852,37.1667,38.5455,38.2,38.2333,38.1875,38.3333,36.92,38.3077,37.7692,38.4444,38.1852,36.9706,37.6579,38,38.275,37.5333,38.2593,37,36.4615,37.3556,38.0833,37.3793,37.625,38.4643,37.6,35.85,37.027,35.6296,37.1875,35.7568,37.4,37.6562,38.375,38.4615,37.1905,36.3333,37.1818,37.7,38.6842,37,38.3793,38.25,37.3333,38.2963,36.8333,37.1786,37.5185,36.2308,38.037,38,37.6429,38.6667,38.3929,37.2273,36.0435,37.087,37.3158,36.76,36.8889,37.4667,36.7308,37.5333,37.3846,36.619,36.8846,35.9655,37.381,37.619,37.7857,34.3704,36.4783,36.5385,35.6071,37.2414,35.8065,37.5556,37.1364,34.9412,37.8,35.95,35.9032,37.2857,36.2857,35.3158,37.037,34.0667,35.6364,35.64,35.6957,35.1364,35.7083,37.6,37.0625,36.5,37.8333,33.3333,34.5333,35.3684,36.625,35.8125,35.5,37.2692,37.48,36.1053,37.7222,35.7692,32.381,37.9474,36.7143,35.8235,36.3529,34.6818,37.6429,32.5,35.6667,34.15,35.3333,35.1111,30.7368,33.0938,33.5,36.4783,36.3684,35.2273,32.7143,36.2727,34.2857,35.1176,31.9375,36.1111,34.6667,33.7826,33.1481,34.9412,27.1875,34.1562,33.2667,31.0588,35.8,33.3,33,34.85,32.9048,30.0625,30.8889,32.0952,33.5882,30.5,34.3571,35,33.3636,30.8824,30.5,29.7895,30.3333,29.3571,29.6923,33.3333,36.6667,28.1538,31.6522,30.8824,32.1579,31.0526,35.4074,31.1667,28.8667,31.8333,33.7143,33.5833,33,29.0625,30.1304,30.9412,33.2,28.4,31.6875,28.381,25.4615,31.7333,31.2632,32.8333,30.0769,22,29.9565,27.3,28.7619,24.7,33.3125,29.619,26.7778,31.5833,27.2857,30.75,32.2727,14.7692], + "T":[33.1111,32,32.2143,32.5116,31.68,35.5333,36.9167,36.7647,35.381,36.2414,34.9688,36.6087,37.8684,37.6667,36.8,37.8125,37.697,36.7895,36.3333,37.6154,37.5,37.4615,37.3226,37.8333,38.5833,37.4444,37.5714,36.9643,36.8519,37.2414,37.5,38.64,37.8387,38.4091,36.9412,37.2273,37.4091,38.2273,37.16,37.6129,37.8214,36.2083,37.0625,37.6129,36.2857,37.08,37.5,37.56,37.92,38.4762,38.4167,37.4545,38.1429,38.5517,38.1176,38.625,36.2963,37.5,37.9375,36.9375,37.5909,38.3871,37.7059,36.5455,37.6538,38.3684,36.65,38.7059,37.5455,38.3529,38.2143,38.2727,38.3,36.0476,36.8421,37.4348,38.4348,37.24,37.375,38.3125,37.1667,38.7273,36.7222,34.7333,37,37.4783,37.4,37.8462,36.7647,37.1667,36.2105,37.95,37.2857,37.6452,38.6111,37.5714,37.375,38.1579,38.3333,34.4667,36.7059,37.5,36.1538,38.0667,37.5333,37.5833,35.4348,35.9474,37.7059,37.3333,37.5,37.8,38.4615,36.5652,34.4211,36.5882,37.0357,37.95,37.1667,38,36.6154,38.6,35,37.5714,35.5556,36.7692,37.9,36.4706,36.7059,37.04,36.7917,37.9231,35.2381,37.3478,36.6765,36.7727,37.2258,36.0417,34.8571,38,37.88,34.8947,37.9545,35.9545,36.3667,37,36.1364,35.8214,36.0435,35.5667,36.1111,32,34.4643,33.5806,36.9189,36.963,35.2963,36.1304,37.8571,36.1923,34.2941,34.2222,34.1538,35.037,35.1481,34.75,33.9259,36.0667,35.4118,34.0741,36.3684,33.6667,35.3125,35.6786,37.2667,33.4231,35.8571,33.7667,35.4722,35.2727,30,34.5789,35.5,35.7333,34,30.3,36.3182,33.7778,32.5789,34.0455,31.3077,33.65,32.5862,35.5833,32.4062,33.1818,34.6389,30.2222,33.963,28.3529,35.2,33.5714,33.2381,32.8824,33.1739,33.6316,32.8276,33.7619,32.44,34.0556,30.9643,30.9565,34.04,33.8276,31.6562,33.6957,32.96,33.3667,32.1389,30.4,30.3333,35.1071,32.3182,32.24,31.1818,29.5417,32.5833,31,32.9032,31.7857,33.6522,34.1562,29.9474,33,33.05,28.7895,33.2857,31.3333,29.0732,28.4118,33.5714,30.1739,31.381,29.32,30.4583,27.5556,29.1333,32,32.3333,30.1923,21.35], + "C":[28.9,31.1333,31.5217,31.2,32.6316,34.8,37,35,35.7419,35.625,34,36.375,37.4615,37.1739,36.68,37.8,36.9091,37.0741,37.9167,35,37.8667,37.0323,37.375,37.0556,38.5,38.8125,38.3684,38.3636,38.1765,37.85,38.1667,38.4348,38.3333,38.15,38.0769,38.2174,37,38.4138,37.1714,37.5882,36.8421,37.8125,37.1429,36.7778,38,37.7826,38.16,36.8333,37.4231,37.48,37.3077,38.4,37.963,37.1,38.3,38.0526,38.1304,37.1212,38.1143,38.2222,36.6552,35.6667,38.1429,37.6429,38.0952,37.4615,37.88,37.68,36.7,37.6,38.2222,37.4062,38.037,37.7879,38.25,38.1935,38.0455,38.24,37.2609,37.08,37.76,36.5,37.1481,36.8276,38.2083,37.2857,38.2609,37.3548,38,36.8333,37.9677,38,37.5652,37.15,37.8108,37.84,38.625,37.5,38.0286,37.25,35.7742,36.1176,37.4348,36.931,36.5333,38.3636,38.3947,37.8077,38.0312,37.6207,38.2286,37.2222,38.3889,36.24,37.6818,35.0526,37.6667,36.625,37,37.44,36.0645,36.7241,37.1463,38.0882,37.9643,36.2414,37.125,37.4643,36.3333,36.7778,37.6757,35.75,36.9688,35.5938,37.08,36.6154,38,36.4483,35.8333,34.9286,36.6667,36.2069,35.7895,36.6,37.92,37.1111,35.1154,35.2222,37,36.0333,34.9583,37.6111,35.2,36.8125,35.2941,36.9565,37.1667,37.2308,37.5625,37,37.15,35.8519,36.7222,35.5238,36.6875,35.7419,36.7895,36.7826,35.913,36.5,35.5909,36.3889,36.6842,34.5,35.8824,36.8276,33.8667,35.1905,37.5333,35.2778,35.4737,35,34.8889,35.037,33.7778,33.4783,31.9,33.7143,36.875,32.9167,34.15,33.72,34.0952,33.9,35.6667,32.7143,29.4167,35.75,32.25,32.85,31.8667,30.4737,34.7273,34.25,33.6522,31.3125,32.3889,33.4348,34.7826,26.7647,30.2222,32.96,32.2308,31.3571,36.25,29.4545,33.5556,26.7143,31.75,34.0714,30.6818,29.6154,32.7692,31.0556,32.1429,30.7,33.7059,31.0625,32.5385,32.7273,33,33,30.7692,31.2857,29.4706,33.4706,33.75,31.1111,30.8889,30,27.4706,31.4,29.7857,33.7692,29.1538,33.4167,34,32.6,28.375,30.8667,19.7273], + "G":[30.7931,32,31.9091,32.6154,30.6667,35.1905,34.3448,35.2727,32.3333,35.6842,36.2222,35.55,37.9412,37.76,37.68,37.32,36.1,36.7619,36.9583,36.9444,37.65,36.6842,38.1538,37.7692,37.6111,38.4615,38.0769,37.7586,38.2188,38.3043,38.3846,37.75,38.5833,38.3333,38.1562,36.6,38.1579,37.6957,38.0667,37.1304,38.2353,36.4762,37.8261,37.4348,38.55,37.2632,37.8125,37.4,38.4286,38.5882,37.2857,37.2778,36.6774,37.0667,35.9375,36.3889,37.6,36.7222,35.5625,38.0455,38.1364,37.15,37.6,38.1429,37.7143,36.56,36.8889,37.8824,37.5161,37.3,36.9412,37.5625,36.8462,36.3529,36.9048,37.6316,36.6522,36.6,37.5909,36.1154,37.1176,37.9394,38.1429,37.7619,36.6842,37.9167,35.3636,36.5862,36.4375,34.5714,37.5,37.4118,36.4375,36.3333,36.5294,37.4545,37.7931,36.75,37.913,37.9565,36.381,36.4074,36.1818,37.5,37.4444,35.3478,36.1667,37.0833,36.4615,36.0417,37.7143,37.5294,36.4348,36.3548,35.6538,35.8857,37.5556,35.9429,35.2609,36.0526,36.6667,36.4091,37.8,36.1786,34.3333,36,35.6296,34.9583,37.4815,35.8696,36.5185,35.1176,37.0741,36.6667,33.9444,34.6667,36.24,35.5652,35.6296,35.6818,37.1923,36.8077,36.5333,36,35.3158,36.3636,36.1515,36.08,33.4194,34.6111,36.4242,35.3462,34.2647,35.6,34.3846,35.3077,35.1111,35.5238,33.9062,34.8636,35.2889,36.069,34.4375,35.6316,35.3143,36.4,36.68,33.6154,35.9091,34.6207,35.5625,34.7391,31.7826,33.129,33.1786,33.44,34.2692,33.3182,34.3158,34.871,34.1562,32.7826,34.2759,34.7576,31.4545,33.1379,32.9143,33.9091,34.1579,34.5357,33.5417,32.7143,31.381,29.6111,33.4737,30.7059,35.3529,33.2353,32.2692,31.7586,32.75,32.52,33.5217,32.8846,29.35,33.1667,33.8824,31.96,30.6429,32.4286,32.9,32.3,34.88,31.7692,32.4737,34.7826,30.3,35.9412,35.9375,30.8636,33.6471,31,32.48,33.2381,33.087,31.3333,32.7895,33.3333,31.1333,33,34.8571,31.7059,33.3,29.8,32.35,33.875,34.4706,34.3333,32.5556,31.0909,32.0833,30.125,31.5,28.6154,32.3333,30,32.9231,31.6429,31.0833,28.5833,24.15], + "mean":[31.0206,32.1856,31.9278,32.1753,32.1031,35.6907,35.732,35.8969,34.9691,35.6186,35.4021,36.1546,37.7216,37.4124,37.2474,37.4639,37.2062,37.1031,37.268,36.866,37.1753,36.8144,37.7938,37.6701,38.3505,38.1443,37.9485,37.7835,37.8247,37.8454,38.1959,38.4021,38.2474,38.1856,38.0722,37.4845,37.701,38.1237,37.4639,37.6804,37.433,37.2474,37.3093,37.6082,37.4639,37.6289,38.0103,37.3918,37.8969,38.0103,38.0103,37.9691,37.4948,37.4227,37.8144,37.5567,37.5773,37.3711,37.701,37.9588,37.6186,37.1649,38.0206,37.5361,38.0515,37.6082,37.1237,37.8866,37.4742,37.9485,37.7835,37.866,37.5155,36.8041,37.268,37.8763,37.6082,37.5258,37.7113,37.1856,37.0309,37.4433,36.6392,36.8247,36.7629,37.433,37.2268,37.4433,37.3918,36.3608,37.0722,37.5979,37.3402,37.3814,37.5258,37.8557,38.134,37.4021,38.1134,36.4536,36.4742,36.9588,36.4845,37.567,37.3711,37.2474,37.3299,37.433,37.3711,36.7938,37.7113,37.4021,37.5155,36.4742,36.433,36.0722,37.4227,36.8557,36.5361,37.1753,36.2577,37.2784,37.0515,37.3814,35.6186,36.3918,36.7113,36.134,36.9897,36.3196,37.1237,36.5361,36.268,36.6495,36.1237,36.0619,37.1443,36.1031,35.4639,36.3021,36.7188,35.9792,36.4792,36.1042,36.2812,36.4792,36.0938,35.9271,35.5104,35.9583,35.3229,34.3542,34.6875,35.4062,35.7604,36.2083,36.2737,36.6526,36.1263,36.4211,35.5684,34.8421,35.4947,35.7579,35.5895,35.8936,35.4301,35.7957,35.2151,35.0753,35.4301,34.9022,34.6739,33.6196,34.3152,34.5109,35.2391,34.5217,35.5109,34.5543,34.0761,34.087,34.9239,34.5055,33.7333,32.9,33.8556,33.6111,34.4556,32.6778,33.573,33.3933,32.3636,33.8046,33.4186,32.5176,34.0941,32.8706,32.3882,31.1429,33.0119,32.5366,32.642,33.5432,32.7037,32.963,32.5432,32.6296,32.1728,31.1358,31.321,31.7037,33.8519,33.1605,32.2,32.8375,31.9875,32.4625,32.6076,32.9231,31.4103,31.8333,32.3333,32.5,32.3718,31.0132,32.1447,31.3026,32.0526,32.5067,32.6267,32.9178,30.5616,30.6389,31.7361,31.7183,33.5441,31.7313,28.9403,29.7612,30.8209,30,30.0896,31,30.194,30.1343,31.1364,31.0152,31.1094,30.4062,20.6094] + }, + "content_curves": { + "A":[0.309278,0.319588,0.360825,0.216495,0.453608,0.42268,0.340206,0.484536,0.247423,0.340206,0.226804,0.309278,0.298969,0.195876,0.278351,0.309278,0.226804,0.309278,0.28866,0.309278,0.350515,0.350515,0.381443,0.371134,0.360825,0.42268,0.319588,0.298969,0.216495,0.257732,0.371134,0.340206,0.278351,0.350515,0.360825,0.381443,0.360825,0.237113,0.226804,0.268041,0.340206,0.371134,0.381443,0.257732,0.381443,0.309278,0.391753,0.175258,0.329897,0.350515,0.340206,0.381443,0.257732,0.185567,0.278351,0.371134,0.226804,0.206186,0.309278,0.329897,0.247423,0.257732,0.402062,0.268041,0.371134,0.278351,0.350515,0.391753,0.247423,0.412371,0.309278,0.278351,0.247423,0.268041,0.463918,0.247423,0.298969,0.329897,0.28866,0.309278,0.206186,0.381443,0.278351,0.329897,0.381443,0.206186,0.329897,0.247423,0.268041,0.216495,0.278351,0.226804,0.309278,0.195876,0.257732,0.298969,0.371134,0.247423,0.278351,0.247423,0.28866,0.278351,0.268041,0.278351,0.350515,0.28866,0.185567,0.28866,0.226804,0.237113,0.237113,0.391753,0.257732,0.185567,0.309278,0.268041,0.309278,0.268041,0.216495,0.268041,0.298969,0.216495,0.216495,0.14433,0.278351,0.237113,0.268041,0.28866,0.298969,0.319588,0.0927835,0.226804,0.175258,0.154639,0.206186,0.319588,0.216495,0.216495,0.195876,0.28125,0.15625,0.229167,0.260417,0.239583,0.229167,0.25,0.15625,0.166667,0.208333,0.1875,0.21875,0.15625,0.197917,0.25,0.166667,0.208333,0.273684,0.263158,0.2,0.189474,0.136842,0.221053,0.2,0.294737,0.178947,0.180851,0.236559,0.150538,0.150538,0.16129,0.215054,0.26087,0.195652,0.206522,0.347826,0.130435,0.25,0.206522,0.23913,0.228261,0.23913,0.380435,0.184783,0.175824,0.2,0.2,0.255556,0.3,0.188889,0.177778,0.359551,0.337079,0.193182,0.172414,0.232558,0.294118,0.235294,0.247059,0.188235,0.214286,0.25,0.207317,0.320988,0.17284,0.185185,0.271605,0.209877,0.148148,0.234568,0.222222,0.17284,0.160494,0.222222,0.148148,0.1625,0.2875,0.2125,0.2375,0.240506,0.346154,0.307692,0.192308,0.230769,0.179487,0.153846,0.197368,0.210526,0.302632,0.223684,0.2,0.2,0.219178,0.287671,0.180556,0.208333,0.267606,0.264706,0.19403,0.119403,0.343284,0.149254,0.313433,0.149254,0.238806,0.313433,0.134328,0.181818,0.212121,0.3125,0.171875,0.203125], + "T":[0.185567,0.43299,0.28866,0.443299,0.257732,0.154639,0.247423,0.175258,0.216495,0.298969,0.329897,0.237113,0.391753,0.309278,0.206186,0.329897,0.340206,0.195876,0.216495,0.402062,0.28866,0.134021,0.319588,0.309278,0.247423,0.278351,0.216495,0.28866,0.278351,0.298969,0.247423,0.257732,0.319588,0.226804,0.175258,0.226804,0.226804,0.226804,0.257732,0.319588,0.28866,0.247423,0.164948,0.319588,0.216495,0.257732,0.185567,0.257732,0.257732,0.216495,0.247423,0.226804,0.14433,0.298969,0.350515,0.247423,0.278351,0.268041,0.164948,0.164948,0.226804,0.319588,0.175258,0.226804,0.268041,0.195876,0.206186,0.175258,0.226804,0.175258,0.14433,0.226804,0.206186,0.216495,0.195876,0.237113,0.237113,0.257732,0.247423,0.164948,0.185567,0.113402,0.371134,0.154639,0.175258,0.237113,0.206186,0.134021,0.175258,0.309278,0.195876,0.206186,0.28866,0.319588,0.185567,0.216495,0.0824742,0.195876,0.123711,0.309278,0.175258,0.268041,0.268041,0.154639,0.154639,0.247423,0.237113,0.195876,0.175258,0.216495,0.185567,0.154639,0.134021,0.237113,0.195876,0.175258,0.28866,0.206186,0.185567,0.278351,0.134021,0.257732,0.154639,0.216495,0.185567,0.268041,0.206186,0.175258,0.175258,0.257732,0.247423,0.268041,0.216495,0.237113,0.350515,0.226804,0.319588,0.247423,0.216495,0.197917,0.260417,0.197917,0.229167,0.229167,0.3125,0.21875,0.229167,0.291667,0.239583,0.3125,0.1875,0.385417,0.291667,0.322917,0.385417,0.28125,0.284211,0.242105,0.294737,0.273684,0.178947,0.189474,0.273684,0.284211,0.284211,0.170213,0.290323,0.322581,0.365591,0.290323,0.204301,0.293478,0.347826,0.304348,0.163043,0.282609,0.304348,0.326087,0.391304,0.23913,0.206522,0.206522,0.304348,0.164835,0.255556,0.222222,0.244444,0.3,0.211111,0.244444,0.146067,0.224719,0.329545,0.275862,0.372093,0.258824,0.423529,0.211765,0.317647,0.202381,0.238095,0.256098,0.259259,0.209877,0.283951,0.234568,0.358025,0.259259,0.308642,0.222222,0.345679,0.283951,0.308642,0.358025,0.4,0.2875,0.3125,0.375,0.455696,0.192308,0.192308,0.358974,0.282051,0.320513,0.282051,0.315789,0.315789,0.25,0.407895,0.373333,0.306667,0.438356,0.260274,0.416667,0.277778,0.267606,0.308824,0.447761,0.61194,0.253731,0.41791,0.343284,0.313433,0.373134,0.358209,0.268657,0.454545,0.424242,0.375,0.40625,0.3125], + "C":[0.206186,0.154639,0.237113,0.206186,0.195876,0.206186,0.113402,0.113402,0.319588,0.164948,0.164948,0.247423,0.134021,0.237113,0.257732,0.103093,0.226804,0.278351,0.247423,0.103093,0.154639,0.319588,0.164948,0.185567,0.206186,0.164948,0.195876,0.113402,0.175258,0.206186,0.247423,0.237113,0.278351,0.206186,0.134021,0.237113,0.216495,0.298969,0.360825,0.175258,0.195876,0.164948,0.216495,0.185567,0.195876,0.237113,0.257732,0.309278,0.268041,0.257732,0.268041,0.206186,0.278351,0.206186,0.206186,0.195876,0.237113,0.340206,0.360825,0.278351,0.298969,0.216495,0.216495,0.28866,0.216495,0.268041,0.257732,0.257732,0.206186,0.206186,0.371134,0.329897,0.278351,0.340206,0.123711,0.319588,0.226804,0.257732,0.237113,0.257732,0.257732,0.164948,0.278351,0.298969,0.247423,0.43299,0.237113,0.319588,0.226804,0.185567,0.319588,0.216495,0.237113,0.206186,0.381443,0.257732,0.247423,0.309278,0.360825,0.206186,0.319588,0.175258,0.237113,0.298969,0.309278,0.226804,0.391753,0.268041,0.329897,0.298969,0.360825,0.278351,0.371134,0.257732,0.226804,0.195876,0.216495,0.164948,0.360825,0.257732,0.319588,0.298969,0.42268,0.350515,0.28866,0.298969,0.247423,0.28866,0.247423,0.185567,0.381443,0.329897,0.329897,0.329897,0.257732,0.268041,0.206186,0.298969,0.309278,0.291667,0.3125,0.302083,0.197917,0.3125,0.260417,0.1875,0.270833,0.28125,0.229167,0.3125,0.25,0.1875,0.15625,0.166667,0.177083,0.239583,0.252632,0.273684,0.168421,0.305263,0.210526,0.284211,0.189474,0.221053,0.168421,0.329787,0.204301,0.247312,0.247312,0.236559,0.236559,0.195652,0.206522,0.152174,0.184783,0.315217,0.163043,0.228261,0.163043,0.195652,0.206522,0.163043,0.195652,0.296703,0.3,0.255556,0.111111,0.155556,0.177778,0.266667,0.224719,0.280899,0.238636,0.344828,0.174419,0.247059,0.141176,0.141176,0.188235,0.238095,0.178571,0.231707,0.135802,0.296296,0.283951,0.197531,0.222222,0.283951,0.283951,0.209877,0.111111,0.308642,0.160494,0.17284,0.2,0.1375,0.225,0.175,0.101266,0.179487,0.282051,0.166667,0.166667,0.230769,0.269231,0.131579,0.223684,0.210526,0.171053,0.293333,0.306667,0.109589,0.178082,0.194444,0.236111,0.239437,0.176471,0.134328,0.134328,0.238806,0.253731,0.223881,0.208955,0.19403,0.19403,0.358209,0.166667,0.151515,0.125,0.234375,0.171875], + "G":[0.298969,0.0927835,0.113402,0.134021,0.0927835,0.216495,0.298969,0.226804,0.216495,0.195876,0.278351,0.206186,0.175258,0.257732,0.257732,0.257732,0.206186,0.216495,0.247423,0.185567,0.206186,0.195876,0.134021,0.134021,0.185567,0.134021,0.268041,0.298969,0.329897,0.237113,0.134021,0.164948,0.123711,0.216495,0.329897,0.154639,0.195876,0.237113,0.154639,0.237113,0.175258,0.216495,0.237113,0.237113,0.206186,0.195876,0.164948,0.257732,0.14433,0.175258,0.14433,0.185567,0.319588,0.309278,0.164948,0.185567,0.257732,0.185567,0.164948,0.226804,0.226804,0.206186,0.206186,0.216495,0.14433,0.257732,0.185567,0.175258,0.319588,0.206186,0.175258,0.164948,0.268041,0.175258,0.216495,0.195876,0.237113,0.154639,0.226804,0.268041,0.350515,0.340206,0.0721649,0.216495,0.195876,0.123711,0.226804,0.298969,0.329897,0.28866,0.206186,0.350515,0.164948,0.278351,0.175258,0.226804,0.298969,0.247423,0.237113,0.237113,0.216495,0.278351,0.226804,0.268041,0.185567,0.237113,0.185567,0.247423,0.268041,0.247423,0.216495,0.175258,0.237113,0.319588,0.268041,0.360825,0.185567,0.360825,0.237113,0.195876,0.247423,0.226804,0.206186,0.28866,0.247423,0.195876,0.278351,0.247423,0.278351,0.237113,0.278351,0.175258,0.278351,0.278351,0.185567,0.185567,0.257732,0.237113,0.278351,0.229167,0.270833,0.270833,0.3125,0.21875,0.197917,0.34375,0.34375,0.260417,0.322917,0.1875,0.34375,0.270833,0.354167,0.260417,0.270833,0.270833,0.189474,0.221053,0.336842,0.231579,0.473684,0.305263,0.336842,0.2,0.368421,0.319149,0.268817,0.27957,0.236559,0.311828,0.344086,0.25,0.25,0.336957,0.304348,0.271739,0.282609,0.23913,0.206522,0.336957,0.347826,0.25,0.315217,0.362637,0.244444,0.322222,0.388889,0.244444,0.422222,0.311111,0.269663,0.157303,0.238636,0.206897,0.22093,0.2,0.2,0.4,0.305882,0.345238,0.333333,0.304878,0.283951,0.320988,0.246914,0.296296,0.209877,0.308642,0.17284,0.345679,0.37037,0.246914,0.308642,0.320988,0.2375,0.2875,0.25,0.2125,0.202532,0.282051,0.217949,0.282051,0.320513,0.269231,0.294872,0.355263,0.25,0.236842,0.197368,0.133333,0.186667,0.232877,0.273973,0.208333,0.277778,0.225352,0.25,0.223881,0.134328,0.164179,0.179104,0.119403,0.328358,0.19403,0.134328,0.238806,0.19697,0.212121,0.1875,0.1875,0.3125], + "N":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0], + "GC":[0.505155,0.247423,0.350515,0.340206,0.28866,0.42268,0.412371,0.340206,0.536082,0.360825,0.443299,0.453608,0.309278,0.494845,0.515464,0.360825,0.43299,0.494845,0.494845,0.28866,0.360825,0.515464,0.298969,0.319588,0.391753,0.298969,0.463918,0.412371,0.505155,0.443299,0.381443,0.402062,0.402062,0.42268,0.463918,0.391753,0.412371,0.536082,0.515464,0.412371,0.371134,0.381443,0.453608,0.42268,0.402062,0.43299,0.42268,0.56701,0.412371,0.43299,0.412371,0.391753,0.597938,0.515464,0.371134,0.381443,0.494845,0.525773,0.525773,0.505155,0.525773,0.42268,0.42268,0.505155,0.360825,0.525773,0.443299,0.43299,0.525773,0.412371,0.546392,0.494845,0.546392,0.515464,0.340206,0.515464,0.463918,0.412371,0.463918,0.525773,0.608247,0.505155,0.350515,0.515464,0.443299,0.556701,0.463918,0.618557,0.556701,0.474227,0.525773,0.56701,0.402062,0.484536,0.556701,0.484536,0.546392,0.556701,0.597938,0.443299,0.536082,0.453608,0.463918,0.56701,0.494845,0.463918,0.57732,0.515464,0.597938,0.546392,0.57732,0.453608,0.608247,0.57732,0.494845,0.556701,0.402062,0.525773,0.597938,0.453608,0.56701,0.525773,0.628866,0.639175,0.536082,0.494845,0.525773,0.536082,0.525773,0.42268,0.659794,0.505155,0.608247,0.608247,0.443299,0.453608,0.463918,0.536082,0.587629,0.520833,0.583333,0.572917,0.510417,0.53125,0.458333,0.53125,0.614583,0.541667,0.552083,0.5,0.59375,0.458333,0.510417,0.427083,0.447917,0.510417,0.442105,0.494737,0.505263,0.536842,0.684211,0.589474,0.526316,0.421053,0.536842,0.648936,0.473118,0.526882,0.483871,0.548387,0.580645,0.445652,0.456522,0.48913,0.48913,0.586957,0.445652,0.467391,0.369565,0.532609,0.554348,0.413043,0.51087,0.659341,0.544444,0.577778,0.5,0.4,0.6,0.577778,0.494382,0.438202,0.477273,0.551724,0.395349,0.447059,0.341176,0.541176,0.494118,0.583333,0.511905,0.536585,0.419753,0.617284,0.530864,0.493827,0.432099,0.592593,0.45679,0.555556,0.481481,0.555556,0.469136,0.493827,0.4375,0.425,0.475,0.3875,0.303797,0.461538,0.5,0.448718,0.487179,0.5,0.564103,0.486842,0.473684,0.447368,0.368421,0.426667,0.493333,0.342466,0.452055,0.402778,0.513889,0.464789,0.426471,0.358209,0.268657,0.402985,0.432836,0.343284,0.537313,0.38806,0.328358,0.597015,0.363636,0.363636,0.3125,0.421875,0.484375] + }, + "kmer_count": { + "AAAAA":0, "AAAAT":52, "AAAAC":32, "AAAAG":0, "AAATA":169, "AAATT":1, "AAATC":0, "AAATG":51, "AAACA":0, "AAACT":0, "AAACC":32, "AAACG":0, "AAAGA":49, "AAAGT":22, "AAAGC":1, "AAAGG":0, + "AATAA":83, "AATAT":44, "AATAC":52, "AATAG":130, "AATTA":32, "AATTT":0, "AATTC":0, "AATTG":3, "AATCA":46, "AATCT":0, "AATCC":0, "AATCG":1, "AATGA":0, "AATGT":0, "AATGC":103, "AATGG":1, + "AACAA":0, "AACAT":8, "AACAC":25, "AACAG":0, "AACTA":0, "AACTT":0, "AACTC":0, "AACTG":21, "AACCA":56, "AACCT":33, "AACCC":0, "AACCG":0, "AACGA":0, "AACGT":70, "AACGC":0, "AACGG":2, + "AAGAA":0, "AAGAT":0, "AAGAC":92, "AAGAG":0, "AAGTA":40, "AAGTT":0, "AAGTC":0, "AAGTG":23, "AAGCA":13, "AAGCT":0, "AAGCC":0, "AAGCG":2, "AAGGA":0, "AAGGT":0, "AAGGC":1, "AAGGG":37, + "ATAAA":72, "ATAAT":42, "ATAAC":6, "ATAAG":43, "ATATA":0, "ATATT":47, "ATATC":0, "ATATG":1, "ATACA":2, "ATACT":58, "ATACC":52, "ATACG":0, "ATAGA":51, "ATAGT":0, "ATAGC":80, "ATAGG":147, + "ATTAA":91, "ATTAT":36, "ATTAC":13, "ATTAG":0, "ATTTA":91, "ATTTT":45, "ATTTC":0, "ATTTG":45, "ATTCA":3, "ATTCT":0, "ATTCC":33, "ATTCG":0, "ATTGA":36, "ATTGT":3, "ATTGC":46, "ATTGG":0, + "ATCAA":49, "ATCAT":0, "ATCAC":131, "ATCAG":0, "ATCTA":0, "ATCTT":0, "ATCTC":0, "ATCTG":71, "ATCCA":49, "ATCCT":26, "ATCCC":0, "ATCCG":28, "ATCGA":0, "ATCGT":47, "ATCGC":72, "ATCGG":2, + "ATGAA":0, "ATGAT":1, "ATGAC":22, "ATGAG":43, "ATGTA":0, "ATGTT":26, "ATGTC":99, "ATGTG":1, "ATGCA":96, "ATGCT":53, "ATGCC":1, "ATGCG":0, "ATGGA":95, "ATGGT":0, "ATGGC":1, "ATGGG":1, + "ACAAA":0, "ACAAT":0, "ACAAC":0, "ACAAG":13, "ACATA":59, "ACATT":0, "ACATC":70, "ACATG":0, "ACACA":17, "ACACT":25, "ACACC":52, "ACACG":37, "ACAGA":51, "ACAGT":3, "ACAGC":0, "ACAGG":55, + "ACTAA":6, "ACTAT":1, "ACTAC":0, "ACTAG":0, "ACTTA":7, "ACTTT":20, "ACTTC":30, "ACTTG":11, "ACTCA":45, "ACTCT":0, "ACTCC":0, "ACTCG":0, "ACTGA":0, "ACTGT":20, "ACTGC":52, "ACTGG":1, + "ACCAA":52, "ACCAT":0, "ACCAC":45, "ACCAG":11, "ACCTA":52, "ACCTT":1, "ACCTC":1, "ACCTG":51, "ACCCA":0, "ACCCT":109, "ACCCC":52, "ACCCG":0, "ACCGA":0, "ACCGT":0, "ACCGC":0, "ACCGG":0, + "ACGAA":52, "ACGAT":43, "ACGAC":0, "ACGAG":0, "ACGTA":37, "ACGTT":50, "ACGTC":1, "ACGTG":34, "ACGCA":1, "ACGCT":45, "ACGCC":0, "ACGCG":44, "ACGGA":0, "ACGGT":1, "ACGGC":0, "ACGGG":45, + "AGAAA":0, "AGAAT":0, "AGAAC":0, "AGAAG":0, "AGATA":52, "AGATT":0, "AGATC":0, "AGATG":11, "AGACA":92, "AGACT":0, "AGACC":51, "AGACG":96, "AGAGA":0, "AGAGT":1, "AGAGC":51, "AGAGG":0, + "AGTAA":24, "AGTAT":66, "AGTAC":0, "AGTAG":16, "AGTTA":0, "AGTTT":0, "AGTTC":3, "AGTTG":0, "AGTCA":0, "AGTCT":0, "AGTCC":1, "AGTCG":0, "AGTGA":18, "AGTGT":5, "AGTGC":0, "AGTGG":51, + "AGCAA":0, "AGCAT":60, "AGCAC":43, "AGCAG":0, "AGCTA":18, "AGCTT":0, "AGCTC":96, "AGCTG":0, "AGCCA":0, "AGCCT":0, "AGCCC":35, "AGCCG":44, "AGCGA":1, "AGCGT":52, "AGCGC":0, "AGCGG":0, + "AGGAA":59, "AGGAT":43, "AGGAC":1, "AGGAG":0, "AGGTA":1, "AGGTT":31, "AGGTC":45, "AGGTG":38, "AGGCA":44, "AGGCT":1, "AGGCC":1, "AGGCG":9, "AGGGA":1, "AGGGT":132, "AGGGC":1, "AGGGG":38, + "TAAAA":32, "TAAAT":115, "TAAAC":0, "TAAAG":21, "TAATA":125, "TAATT":32, "TAATC":1, "TAATG":1, "TAACA":24, "TAACT":0, "TAACC":45, "TAACG":1, "TAAGA":42, "TAAGT":24, "TAAGC":0, "TAAGG":39, + "TATAA":0, "TATAT":1, "TATAC":0, "TATAG":0, "TATTA":96, "TATTT":136, "TATTC":1, "TATTG":35, "TATCA":44, "TATCT":41, "TATCC":28, "TATCG":71, "TATGA":24, "TATGT":78, "TATGC":3, "TATGG":0, + "TACAA":13, "TACAT":0, "TACAC":0, "TACAG":15, "TACTA":6, "TACTT":37, "TACTC":0, "TACTG":51, "TACCA":52, "TACCT":1, "TACCC":0, "TACCG":0, "TACGA":0, "TACGT":14, "TACGC":0, "TACGG":0, + "TAGAA":0, "TAGAT":0, "TAGAC":51, "TAGAG":0, "TAGTA":24, "TAGTT":0, "TAGTC":0, "TAGTG":0, "TAGCA":45, "TAGCT":17, "TAGCC":35, "TAGCG":0, "TAGGA":60, "TAGGT":69, "TAGGC":2, "TAGGG":103, + "TTAAA":40, "TTAAT":85, "TTAAC":61, "TTAAG":38, "TTATA":0, "TTATT":73, "TTATC":19, "TTATG":37, "TTACA":12, "TTACT":6, "TTACC":0, "TTACG":0, "TTAGA":0, "TTAGT":22, "TTAGC":2, "TTAGG":32, + "TTTAA":38, "TTTAT":47, "TTTAC":0, "TTTAG":55, "TTTTA":27, "TTTTT":2, "TTTTC":45, "TTTTG":0, "TTTCA":0, "TTTCT":0, "TTTCC":0, "TTTCG":45, "TTTGA":39, "TTTGT":0, "TTTGC":0, "TTTGG":45, + "TTCAA":14, "TTCAT":1, "TTCAC":3, "TTCAG":31, "TTCTA":0, "TTCTT":0, "TTCTC":0, "TTCTG":0, "TTCCA":0, "TTCCT":63, "TTCCC":39, "TTCCG":1, "TTCGA":0, "TTCGT":45, "TTCGC":26, "TTCGG":0, + "TTGAA":37, "TTGAT":37, "TTGAC":0, "TTGAG":1, "TTGTA":1, "TTGTT":3, "TTGTC":0, "TTGTG":2, "TTGCA":0, "TTGCT":1, "TTGCC":0, "TTGCG":45, "TTGGA":0, "TTGGT":44, "TTGGC":1, "TTGGG":11, + "TCAAA":49, "TCAAT":14, "TCAAC":0, "TCAAG":1, "TCATA":32, "TCATT":0, "TCATC":28, "TCATG":0, "TCACA":45, "TCACT":4, "TCACC":45, "TCACG":86, "TCAGA":0, "TCAGT":0, "TCAGC":0, "TCAGG":31, + "TCTAA":0, "TCTAT":44, "TCTAC":0, "TCTAG":0, "TCTTA":38, "TCTTT":38, "TCTTC":1, "TCTTG":0, "TCTCA":0, "TCTCT":1, "TCTCC":45, "TCTCG":53, "TCTGA":2, "TCTGT":40, "TCTGC":1, "TCTGG":75, + "TCCAA":2, "TCCAT":94, "TCCAC":2, "TCCAG":51, "TCCTA":68, "TCCTT":0, "TCCTC":0, "TCCTG":33, "TCCCA":0, "TCCCT":0, "TCCCC":38, "TCCCG":51, "TCCGA":28, "TCCGT":0, "TCCGC":0, "TCCGG":54, + "TCGAA":0, "TCGAT":0, "TCGAC":0, "TCGAG":0, "TCGTA":0, "TCGTT":0, "TCGTC":45, "TCGTG":48, "TCGCA":115, "TCGCT":0, "TCGCC":27, "TCGCG":52, "TCGGA":6, "TCGGT":0, "TCGGC":1, "TCGGG":2, + "TGAAA":0, "TGAAT":0, "TGAAC":54, "TGAAG":17, "TGATA":49, "TGATT":36, "TGATC":52, "TGATG":44, "TGACA":0, "TGACT":1, "TGACC":21, "TGACG":0, "TGAGA":0, "TGAGT":51, "TGAGC":1, "TGAGG":45, + "TGTAA":31, "TGTAT":20, "TGTAC":0, "TGTAG":1, "TGTTA":7, "TGTTT":0, "TGTTC":27, "TGTTG":0, "TGTCA":1, "TGTCT":78, "TGTCC":9, "TGTCG":50, "TGTGA":52, "TGTGT":4, "TGTGC":43, "TGTGG":32, + "TGCAA":0, "TGCAT":97, "TGCAC":96, "TGCAG":0, "TGCTA":52, "TGCTT":1, "TGCTC":52, "TGCTG":0, "TGCCA":0, "TGCCT":32, "TGCCC":0, "TGCCG":1, "TGCGA":133, "TGCGT":0, "TGCGC":2, "TGCGG":0, + "TGGAA":0, "TGGAT":43, "TGGAC":0, "TGGAG":97, "TGGTA":44, "TGGTT":81, "TGGTC":0, "TGGTG":0, "TGGCA":1, "TGGCT":2, "TGGCC":0, "TGGCG":1, "TGGGA":1, "TGGGT":1, "TGGGC":33, "TGGGG":56, + "CAAAA":0, "CAAAT":51, "CAAAC":0, "CAAAG":49, "CAATA":14, "CAATT":2, "CAATC":0, "CAATG":52, "CAACA":1, "CAACT":1, "CAACC":0, "CAACG":0, "CAAGA":0, "CAAGT":1, "CAAGC":14, "CAAGG":0, + "CATAA":38, "CATAT":0, "CATAC":7, "CATAG":52, "CATTA":13, "CATTT":46, "CATTC":1, "CATTG":45, "CATCA":42, "CATCT":30, "CATCC":27, "CATCG":49, "CATGA":0, "CATGT":0, "CATGC":45, "CATGG":52, + "CACAA":0, "CACAT":0, "CACAC":105, "CACAG":45, "CACTA":1, "CACTT":30, "CACTC":45, "CACTG":1, "CACCA":0, "CACCT":19, "CACCC":141, "CACCG":0, "CACGA":43, "CACGT":37, "CACGC":45, "CACGG":44, + "CAGAA":0, "CAGAT":62, "CAGAC":52, "CAGAG":0, "CAGTA":42, "CAGTT":2, "CAGTC":1, "CAGTG":0, "CAGCA":2, "CAGCT":0, "CAGCC":0, "CAGCG":51, "CAGGA":44, "CAGGT":45, "CAGGC":9, "CAGGG":31, + "CTAAA":55, "CTAAT":0, "CTAAC":1, "CTAAG":0, "CTATA":0, "CTATT":105, "CTATC":96, "CTATG":44, "CTACA":14, "CTACT":30, "CTACC":1, "CTACG":19, "CTAGA":0, "CTAGT":0, "CTAGC":0, "CTAGG":0, + "CTTAA":39, "CTTAT":40, "CTTAC":6, "CTTAG":0, "CTTTA":23, "CTTTT":0, "CTTTC":0, "CTTTG":39, "CTTCA":31, "CTTCT":0, "CTTCC":1, "CTTCG":0, "CTTGA":2, "CTTGT":1, "CTTGC":0, "CTTGG":11, + "CTCAA":1, "CTCAT":27, "CTCAC":45, "CTCAG":0, "CTCTA":0, "CTCTT":1, "CTCTC":46, "CTCTG":1, "CTCCA":97, "CTCCT":0, "CTCCC":50, "CTCCG":53, "CTCGA":0, "CTCGT":1, "CTCGC":53, "CTCGG":0, + "CTGAA":17, "CTGAT":1, "CTGAC":1, "CTGAG":1, "CTGTA":51, "CTGTT":0, "CTGTC":41, "CTGTG":52, "CTGCA":1, "CTGCT":0, "CTGCC":32, "CTGCG":51, "CTGGA":45, "CTGGT":29, "CTGGC":2, "CTGGG":44, + "CCAAA":51, "CCAAT":1, "CCAAC":2, "CCAAG":1, "CCATA":6, "CCATT":0, "CCATC":48, "CCATG":45, "CCACA":36, "CCACT":46, "CCACC":0, "CCACG":1, "CCAGA":63, "CCAGT":0, "CCAGC":51, "CCAGG":0, + "CCTAA":34, "CCTAT":116, "CCTAC":61, "CCTAG":0, "CCTTA":39, "CCTTT":1, "CCTTC":0, "CCTTG":1, "CCTCA":27, "CCTCT":1, "CCTCC":1, "CCTCG":0, "CCTGA":20, "CCTGT":81, "CCTGC":31, "CCTGG":0, + "CCCAA":0, "CCCAT":5, "CCCAC":36, "CCCAG":52, "CCCTA":89, "CCCTT":38, "CCCTC":0, "CCCTG":20, "CCCCA":52, "CCCCT":38, "CCCCC":104, "CCCCG":0, "CCCGA":0, "CCCGT":51, "CCCGC":0, "CCCGG":0, + "CCGAA":0, "CCGAT":0, "CCGAC":28, "CCGAG":0, "CCGTA":0, "CCGTT":0, "CCGTC":0, "CCGTG":51, "CCGCA":1, "CCGCT":0, "CCGCC":0, "CCGCG":0, "CCGGA":43, "CCGGT":1, "CCGGC":53, "CCGGG":2, + "CGAAA":52, "CGAAT":0, "CGAAC":9, "CGAAG":0, "CGATA":82, "CGATT":0, "CGATC":0, "CGATG":43, "CGACA":79, "CGACT":0, "CGACC":0, "CGACG":1, "CGAGA":44, "CGAGT":0, "CGAGC":0, "CGAGG":0, + "CGTAA":0, "CGTAT":0, "CGTAC":0, "CGTAG":37, "CGTTA":0, "CGTTT":0, "CGTTC":51, "CGTTG":0, "CGTCA":0, "CGTCT":97, "CGTCC":1, "CGTCG":0, "CGTGA":99, "CGTGT":32, "CGTGC":52, "CGTGG":2, + "CGCAA":53, "CGCAT":0, "CGCAC":22, "CGCAG":44, "CGCTA":0, "CGCTT":1, "CGCTC":1, "CGCTG":44, "CGCCA":0, "CGCCT":28, "CGCCC":0, "CGCCG":1, "CGCGA":45, "CGCGT":52, "CGCGC":0, "CGCGG":0, + "CGGAA":0, "CGGAT":6, "CGGAC":0, "CGGAG":43, "CGGTA":0, "CGGTT":1, "CGGTC":0, "CGGTG":2, "CGGCA":0, "CGGCT":53, "CGGCC":0, "CGGCG":1, "CGGGA":44, "CGGGT":2, "CGGGC":3, "CGGGG":0, + "GAAAA":52, "GAAAT":0, "GAAAC":0, "GAAAG":0, "GAATA":0, "GAATT":0, "GAATC":45, "GAATG":0, "GAACA":8, "GAACT":19, "GAACC":14, "GAACG":71, "GAAGA":0, "GAAGT":16, "GAAGC":0, "GAAGG":0, + "GATAA":39, "GATAT":0, "GATAC":56, "GATAG":96, "GATTA":1, "GATTT":0, "GATTC":35, "GATTG":0, "GATCA":45, "GATCT":0, "GATCC":50, "GATCG":0, "GATGA":43, "GATGT":49, "GATGC":0, "GATGG":44, + "GACAA":0, "GACAT":122, "GACAC":0, "GACAG":51, "GACTA":0, "GACTT":1, "GACTC":0, "GACTG":0, "GACCA":0, "GACCT":52, "GACCC":20, "GACCG":0, "GACGA":52, "GACGT":0, "GACGC":45, "GACGG":0, + "GAGAA":0, "GAGAT":1, "GAGAC":44, "GAGAG":52, "GAGTA":0, "GAGTT":1, "GAGTC":0, "GAGTG":51, "GAGCA":43, "GAGCT":96, "GAGCC":44, "GAGCG":0, "GAGGA":0, "GAGGT":1, "GAGGC":43, "GAGGG":2, + "GTAAA":0, "GTAAT":31, "GTAAC":0, "GTAAG":24, "GTATA":1, "GTATT":44, "GTATC":69, "GTATG":26, "GTACA":0, "GTACT":0, "GTACC":0, "GTACG":0, "GTAGA":0, "GTAGT":0, "GTAGC":13, "GTAGG":54, + "GTTAA":56, "GTTAT":6, "GTTAC":0, "GTTAG":0, "GTTTA":0, "GTTTT":29, "GTTTC":0, "GTTTG":0, "GTTCA":15, "GTTCT":0, "GTTCC":69, "GTTCG":26, "GTTGA":0, "GTTGT":2, "GTTGC":0, "GTTGG":0, + "GTCAA":0, "GTCAT":32, "GTCAC":1, "GTCAG":0, "GTCTA":44, "GTCTT":76, "GTCTC":53, "GTCTG":46, "GTCCA":3, "GTCCT":10, "GTCCC":0, "GTCCG":0, "GTCGA":0, "GTCGT":0, "GTCGC":43, "GTCGG":7, + "GTGAA":18, "GTGAT":148, "GTGAC":0, "GTGAG":52, "GTGTA":0, "GTGTT":5, "GTGTC":1, "GTGTG":77, "GTGCA":96, "GTGCT":51, "GTGCC":0, "GTGCG":39, "GTGGA":0, "GTGGT":52, "GTGGC":0, "GTGGG":35, + "GCAAA":0, "GCAAT":53, "GCAAC":0, "GCAAG":0, "GCATA":0, "GCATT":104, "GCATC":2, "GCATG":52, "GCACA":52, "GCACT":0, "GCACC":64, "GCACG":44, "GCAGA":0, "GCAGT":42, "GCAGC":2, "GCAGG":44, + "GCTAA":17, "GCTAT":85, "GCTAC":2, "GCTAG":0, "GCTTA":1, "GCTTT":2, "GCTTC":0, "GCTTG":2, "GCTCA":1, "GCTCT":46, "GCTCC":153, "GCTCG":1, "GCTGA":0, "GCTGT":1, "GCTGC":0, "GCTGG":44, + "GCCAA":1, "GCCAT":0, "GCCAC":0, "GCCAG":0, "GCCTA":0, "GCCTT":1, "GCCTC":29, "GCCTG":29, "GCCCA":41, "GCCCT":0, "GCCCC":0, "GCCCG":0, "GCCGA":0, "GCCGT":0, "GCCGC":1, "GCCGG":45, + "GCGAA":9, "GCGAT":82, "GCGAC":52, "GCGAG":44, "GCGTA":0, "GCGTT":0, "GCGTC":52, "GCGTG":52, "GCGCA":2, "GCGCT":0, "GCGCC":1, "GCGCG":1, "GCGGA":0, "GCGGT":1, "GCGGC":0, "GCGGG":0, + "GGAAA":0, "GGAAT":45, "GGAAC":50, "GGAAG":0, "GGATA":9, "GGATT":0, "GGATC":43, "GGATG":43, "GGACA":1, "GGACT":0, "GGACC":0, "GGACG":0, "GGAGA":53, "GGAGT":0, "GGAGC":131, "GGAGG":1, + "GGTAA":0, "GGTAT":44, "GGTAC":0, "GGTAG":13, "GGTTA":52, "GGTTT":29, "GGTTC":29, "GGTTG":2, "GGTCA":32, "GGTCT":45, "GGTCC":0, "GGTCG":0, "GGTGA":49, "GGTGT":44, "GGTGC":91, "GGTGG":2, + "GGCAA":0, "GGCAT":1, "GGCAC":0, "GGCAG":44, "GGCTA":34, "GGCTT":3, "GGCTC":52, "GGCTG":1, "GGCCA":0, "GGCCT":1, "GGCCC":4, "GGCCG":0, "GGCGA":8, "GGCGT":0, "GGCGC":2, "GGCGG":1, + "GGGAA":35, "GGGAT":3, "GGGAC":0, "GGGAG":45, "GGGTA":12, "GGGTT":1, "GGGTC":32, "GGGTG":146, "GGGCA":0, "GGGCT":34, "GGGCC":2, "GGGCG":1, "GGGGA":37, "GGGGT":55, "GGGGC":1, "GGGGG":100 + }, + "overrepresented_sequences": { + } + }, + "read2_before_filtering": { + "total_reads": 99, + "total_bases": 24849, + "q20_bases": 22676, + "q30_bases": 21532, + "total_cycles": 251, + "quality_curves": { + "A":[32.8571,33.24,33.0606,33,32.9189,36.1136,36.6667,35.9583,36.5263,35.9429,36.7222,36.3929,37.7857,37.0476,37.8696,37.8286,37.7931,37.4667,37.8333,37.9545,37.8889,37.3333,38.7333,38.4167,38.5789,38.8889,38.125,38.6667,38.4667,38.4412,37.5312,38.7368,38.4074,38.3023,38.5429,38.675,38.3947,38.5652,37.3636,38.5517,37.5517,38.6071,38.3421,36.1,38.1081,38.5,38.4872,38.4,38.8077,38.6735,38.5,38.5952,38.0556,38.44,37.8387,38.2778,38.5714,38.3478,38.8485,37.7241,38.5217,38.4118,38.5385,38.3,38.0789,37.7576,37.9429,38.4103,36.6053,37.5,38.2759,38.5152,36.7667,35.5333,38.2222,35.6087,37.4412,35.7143,37.125,37.0513,36.5556,38.4138,37.1389,38.1818,37.5366,38.5833,37.7778,37.16,37.1154,38.0417,37.6897,37.9524,38.1379,38.1,37.5333,38.1176,37.9032,38.5714,36.6667,37.6552,37.7037,36.55,37.7742,38.3333,37.6286,37.1429,36.9474,36.4074,36.3158,37.35,37.5,37.8205,37.0476,35.5556,36.8387,36.7,36.6129,36.1667,36.9048,35.0526,37.8333,37.2941,37.44,35.4,36.5556,35.6667,37.8,36.4375,37.8333,35.52,38.4118,35.7,35.6,37.9545,35.6875,35.96,36.381,34.3333,34.3333,36.7895,35.5238,35.7647,33.2609,30.8,32.3,33.84,34.6522,34.6667,36.2593,37.25,36.4091,34.625,34,35.36,35.4286,35.5,36.9565,34.5238,34.2632,34.8333,33.1538,34.4545,34.4348,35.303,34.3077,35.55,37.125,36.25,31.381,33.1364,34.6957,29.2609,33.25,31.6,32.4412,31.2941,32,31.6842,33.4167,33.6818,34.4762,35.8286,32.1852,32.6471,29.0667,30.8571,30.5833,32.8966,27.8421,25.0417,33.1429,31.7222,29.8889,32.6667,29.375,30.3478,31.2222,31.7143,30.087,32.16,30.6,24.0435,28.619,31.2308,27.25,30.1852,30.7273,29.1667,25.9444,27.9444,30.4286,27.6522,28.1429,27.25,25.7857,27.7059,29.2222,27.1667,30.7895,27.8214,29.3,27.4091,27.7368,24.8421,27.1429,29.45,25.6875,27.4706,28.1818,27.5652,29.25,28,29.2727,25.9286,26.7059,28.2759,30.5,21.1905,23.1111,25.8889,22.619,24.1923,24.48,25.8,27.5417,22.8889,22.8333,26.5455,24.12,25.64,15.9167], + "T":[32.0769,33.2128,33.4688,33.4222,33.2143,33,36.1111,37,36.4,36.6207,36.0263,36.88,37.2857,37.7931,37.7812,37.2333,37.9375,37.1429,37.9565,37.5556,37.9615,38,38.7222,38.8,38.5,38.5517,38.963,38.7188,38.7368,38.4839,38.5833,37.6364,38.7647,38.8421,38.6,38.6111,38.2308,38.7692,38.3889,37.7879,38.25,38.4231,35.5882,37.8667,38.5789,37.5,38.2143,37.4242,37.0968,37.5,38.7931,38.5385,38.7037,37.3871,38.7241,37.6071,38.4,38.7143,35.35,37.72,38.8621,37.6154,38.3,38.2174,38.3913,38.6154,38.2174,34.8333,35.8182,36.84,36.3,33.9167,38.7778,37.875,37.1739,37.087,37.3846,38.2667,38.2917,35.9231,36.5333,37.7647,36.1667,36.8125,37.8235,37.24,37.2857,37.2632,37.1053,38.4286,38.5882,38,36.4706,38.069,36.75,38.5417,35.875,38.3478,38.2,35.7241,35.7857,37.931,38.1154,38.5789,36.5455,38.381,36.5714,38.1667,37.9286,37.8421,35.2632,38.2667,37.4545,35.6667,36.65,36.625,36.4444,37,38.375,37.6897,37.3684,37.4706,35.5294,37.2917,36.4074,37.4194,35.7778,34.5263,36.1739,37.2812,36,37.6071,38.2222,36.5357,35.6897,36.6667,37.2963,36.8462,36.5185,37.037,35.5172,33.3333,37.2692,35.3913,37.5172,30.5263,37,35.5455,34.92,35.5588,37.2667,35.3243,33.0476,34.36,35.0303,35.6,35.2609,34.52,35.1818,33.3913,34.5789,34.5556,37.55,35.5556,35.2059,35.3571,32.7333,35.3793,32.1714,31.8889,35,33.9167,36.12,35.1364,34.1538,33.0909,32.1852,33,33.6286,33,34.625,31.7083,34.3667,32.7083,31.6842,30,31.6818,29.4545,30.8333,31.7391,31.1364,31.68,34.1935,32.7143,32.6,33.5556,30.7632,31.1852,31.8182,31.24,32.3333,31.8182,33.2857,31.5238,28.641,32.3077,30.5833,30.5417,31.9783,30.2727,29.4,33,30.8438,30.0588,33.125,29.1538,32.7308,31.0882,31.2895,32.6,31.0571,34.2105,30.52,28.8485,32.3684,28.4516,32.6,29.25,29.3235,28.7241,31.0909,29.25,23.5385,29.2778,27,26.4231,27.2857,29.625,27.8929,25.1212,26.75,26.7778,26.8,27.2889,25.6061,28.8929,26.0952,26.2286,24.6,24.5588,21.5667], + "C":[33.2188,33.2941,33.56,33.25,32.7917,36.5,36.5385,35.25,34.7353,34.4615,35.8667,36,36.8824,37.9167,36.7895,38,37.1538,37.4,37.12,36.9048,36.6667,37.9667,37.5238,38.8571,37.8696,37.1429,38.7778,38.5833,37.8889,37.4286,38.5862,38.2632,37.8261,37.7647,38.5455,37.88,37.3333,37.7692,38.2927,36.5,38.8462,37.7778,38.5,38.3462,37.32,38.2857,38.3214,38.2381,37.7188,37.95,38.1379,37.4545,37.4444,38.3889,38.3182,38.6,38.5217,38.1053,37.95,38.4615,38.4091,38.4737,38.2917,38.1,38.1176,37.8462,37.5,38.5185,38.2941,38.3333,37.8537,37.6154,38.1667,37.625,37.9,37.8571,36.7,38.3667,37.64,38.2778,38.2,36.92,37.52,37.5,37.95,37.587,37.9333,38.2083,38.08,37.9091,38,38.2308,38.2,38.0667,37.7143,38.6538,38.7037,37.3871,37.5135,35.4667,37.4242,36.7857,38.1538,38.1429,38.0588,38.1875,36.4688,38.25,37.3571,36.0323,37.7273,35.1786,37,36.9355,37.1739,34.8571,37.05,36.9286,36,36.6667,37.8286,38.04,37.234,38.0645,36.9583,38.1053,37.9375,37.4,36.6538,36.6316,37.4615,37.9259,35.6667,33.6111,37.3214,36.3636,37.6818,36.1379,36.5312,35.9583,37.6667,35.9688,35.2174,36.2424,36.1538,37.4,36.2174,36.3125,35.375,36.7188,36.9286,36.1429,36.5,35.619,34.2857,36.6957,35.8235,36.7273,35.7333,35.3548,36.6071,35.3158,35.3846,35.7895,36.4375,36.1143,35.8214,35.087,32.9565,34.3043,33.5333,33.0455,36.7647,34.75,34.5789,34.2778,31.9167,35.4231,33.65,32.4,34.5,36.7619,34.9333,36.1667,35.25,32.7619,34.3846,34,31.2609,32.5,31.7143,31.64,32.3846,32.3636,31.7037,33.2609,34.15,33.4211,30.0588,31.4615,32.3684,32.7727,30.2778,32.4286,31.6957,27.48,31.4091,31.7188,29.8,34.7143,31.7857,30.3077,31.5,27.8333,29.7273,30.2353,29.1,31.6957,33.2222,32.087,33,26.85,26.2273,29.6,30.5625,29.45,24.8182,30.35,26.7037,27.3125,29.5769,27.6522,26.08,27.6538,26,23.45,29.8889,27.48,27.875,28.52,26,23.9259,25.6667,27.7917,26.5217,25.9167,24.2308,23.4375,29.8182,25.8,18.7647], + "G":[32.0645,31.1,31,33.4444,32.4,36.375,35.1562,35.6111,35.75,36.2727,35.1786,36.0455,38,37.6667,37.76,37.95,37.6667,38,37.8095,37.95,37.7368,38,38.1818,37.4737,36.8125,38.4615,37.8182,37.24,38.5652,38.0769,38.6429,38.4,37.2,38.55,37.5,38.1875,38.4118,37.25,38.5556,37.8696,36.05,38,37.5,37.8261,38.1667,36.7273,37.3333,38.25,37.9,38.3,36.3077,37.2273,37.2593,38.56,38.0588,36.6,38,38.0588,38.2692,36.5789,37.08,37.7,37.2759,36.2692,36.9048,36.0714,37.7619,35.5333,38.6818,38.1364,38.1053,37.1429,37.6667,37.9231,35.2857,37.04,37.6842,37.0769,37.3077,37.931,37.8077,37.1071,37.8571,37.087,36.4286,36.5625,35.3889,37.7419,37.931,36.68,35.8261,37.3125,38.3846,37.24,38.0588,34,36.68,35.6522,36.5,37.6154,37.36,37.2778,37.6875,36.8182,36.6842,36.56,38.0769,36.5238,36.9167,36.1071,37.3636,36,37.6452,37.5714,37.16,37.2857,37.619,37.8,36.2917,37.6296,36,36.0435,37,36.8824,36.8095,36.92,38.0909,37.1379,37.3462,37.1304,37.4583,36.125,37.0606,36.7419,36.1923,36.4286,35.1034,36.4483,35.3636,36.2414,36.48,36.4286,36.1852,36.913,35.2083,35.525,37.3333,37.4545,36.4348,34.4762,34.7647,33.92,35.7353,35.3929,37.1176,35.0286,36.3158,34.35,35.3488,36.8571,34.3846,36.25,32.5,34.45,35.5,35.6333,35.08,32.6129,29.35,32.8519,34.7333,35.6667,33.3636,34.3333,34.1515,33.7917,36.24,35.1333,33.1,33.8667,33.5263,32.1579,35.3704,34.9286,35.7576,34.9722,33.425,32.3,33.2727,33.2917,28.4286,29.0769,31.875,32.0833,33.5714,33.8846,34.4783,31.0256,32.3462,31.3043,30.32,29.381,29.5312,30.4167,31.8095,31.8571,29.5789,32.6774,28.5333,30.9111,30.6667,30.9091,27,27.76,26.96,32.3462,29,29.7917,29.6667,30.1304,30.6,26.8421,28.8485,29.4444,27.7059,25.6071,26.7692,25.56,30.125,24.0667,25,29.5455,29.7308,24.7391,27.4375,24.1667,22.1304,27.3103,25.1176,24.9286,24.2941,25.5,27.0417,23.2667,25.8947,24.3793,22.0714,20.5385,20.2727,23.05,18.575], + "mean":[32,33.0202,33.1313,33.3131,32.9192,35.8485,36.0101,35.9596,35.7475,36.0202,35.8889,36.3434,37.4949,37.2727,37.6061,37.697,37.6566,37.4747,37.6768,37.5859,37.6566,37.7273,38.0404,38.4141,38.1111,38.3636,38.404,38.3131,38.3838,38.1919,38.2525,38.3333,38.2121,38.3636,38.3232,38.3838,38.1616,38.0909,38.1515,37.8485,37.7576,38.2222,37.7778,37.6263,38.0101,37.7576,38.1919,38.0101,37.8283,38.2525,38.1919,38.0303,37.8485,38.1313,38.2424,37.899,38.3838,38.2828,37.8081,37.697,38.2323,38.0707,38.0606,37.7071,37.9091,37.7677,37.8788,37.3535,37.1818,37.5758,37.8687,37.3333,37.7879,37.0909,37.3232,36.9495,37.3232,37.2626,37.5859,37.3838,37.2929,37.5556,37.101,37.4444,37.4343,37.4545,37.2626,37.6162,37.596,37.7778,37.5051,37.798,37.9091,37.8687,37.202,37.7374,37.4848,37.101,37.1818,36.7475,37.2525,37.2525,37.9495,37.9899,37.4747,37.596,36.6566,37,37.2121,36.3232,36.7576,36.4848,36.9596,36.7172,36.9596,36.3737,36.8687,37.0707,36.8384,36.9192,37.0101,37.2525,36.9697,37.202,36.6667,37,37.1515,36.6162,37.0101,36.6768,37.3434,36.9495,36.5859,36.3838,36.2828,36.3535,36.5455,36.1414,35.8687,36.4949,36.2828,35.697,35.5657,35.101,35.5455,34.4242,36.3737,36.3232,35.7475,35.9091,36.1212,35.0303,34.899,35.1717,35.2626,35.6364,36.0505,35.2222,35.1616,35.0909,34.8889,35.0101,34.7273,35.2929,35.3939,35.7475,34.9091,34.5859,31.6162,32.9899,34.404,33.1717,34.6162,34.0606,33.6465,33.3838,33.101,34.0303,33.4747,33.2626,34.1515,34.3232,34.1313,34.3737,33.798,32.5758,32.4747,32.1515,31.1717,30.7071,31.0606,31.3434,32.3737,32.4343,32.0404,32.8283,32.3939,31.6263,31.2525,31.5455,31.3939,29.7071,30.5354,31.4343,29.798,30.4141,30.6061,31.4242,29.9192,30.7677,30.3737,30.5859,29.0303,28.4848,28.7374,29.9293,30.0707,30.202,31.1515,30.5556,31.0808,29.798,28.4747,28.3939,29.4444,28.0505,28.2222,27.9293,28.4848,27.2929,28.4141,28.596,27.0808,27.3232,26.9899,25.8182,27.0808,26.6162,26.5455,26.1616,25.2929,25.1919,26.101,26.5758,26.3434,25.7576,24.2929,24.3535,24.6768,24.7778,19.1919] + }, + "content_curves": { + "A":[0.212121,0.252525,0.333333,0.131313,0.373737,0.444444,0.272727,0.484848,0.191919,0.353535,0.181818,0.282828,0.282828,0.212121,0.232323,0.353535,0.292929,0.30303,0.30303,0.222222,0.363636,0.393939,0.30303,0.363636,0.383838,0.363636,0.323232,0.30303,0.30303,0.343434,0.323232,0.383838,0.272727,0.434343,0.353535,0.40404,0.383838,0.232323,0.222222,0.292929,0.292929,0.282828,0.383838,0.20202,0.373737,0.262626,0.393939,0.252525,0.262626,0.494949,0.282828,0.424242,0.181818,0.252525,0.313131,0.363636,0.282828,0.232323,0.333333,0.292929,0.232323,0.343434,0.262626,0.30303,0.383838,0.333333,0.353535,0.393939,0.383838,0.40404,0.292929,0.333333,0.30303,0.30303,0.454545,0.232323,0.343434,0.282828,0.242424,0.393939,0.181818,0.292929,0.363636,0.222222,0.414141,0.121212,0.454545,0.252525,0.262626,0.242424,0.292929,0.212121,0.292929,0.30303,0.30303,0.343434,0.313131,0.212121,0.272727,0.292929,0.272727,0.20202,0.313131,0.30303,0.353535,0.212121,0.191919,0.272727,0.191919,0.20202,0.242424,0.393939,0.212121,0.181818,0.313131,0.20202,0.313131,0.242424,0.212121,0.191919,0.242424,0.171717,0.252525,0.10101,0.272727,0.242424,0.252525,0.161616,0.242424,0.252525,0.171717,0.20202,0.151515,0.222222,0.161616,0.252525,0.212121,0.151515,0.181818,0.191919,0.212121,0.171717,0.232323,0.20202,0.20202,0.252525,0.232323,0.121212,0.272727,0.121212,0.222222,0.161616,0.242424,0.252525,0.212121,0.161616,0.232323,0.212121,0.191919,0.242424,0.131313,0.333333,0.232323,0.333333,0.131313,0.20202,0.161616,0.161616,0.212121,0.222222,0.232323,0.232323,0.242424,0.20202,0.343434,0.171717,0.232323,0.191919,0.242424,0.222222,0.212121,0.353535,0.272727,0.171717,0.151515,0.212121,0.242424,0.292929,0.191919,0.242424,0.282828,0.363636,0.181818,0.212121,0.161616,0.232323,0.181818,0.141414,0.232323,0.252525,0.252525,0.232323,0.212121,0.262626,0.161616,0.272727,0.222222,0.121212,0.181818,0.181818,0.282828,0.232323,0.212121,0.161616,0.282828,0.171717,0.272727,0.181818,0.191919,0.282828,0.20202,0.222222,0.191919,0.191919,0.141414,0.20202,0.161616,0.343434,0.222222,0.232323,0.20202,0.252525,0.222222,0.141414,0.171717,0.292929,0.161616,0.212121,0.181818,0.272727,0.212121,0.262626,0.252525,0.151515,0.242424,0.181818,0.30303,0.222222,0.252525,0.252525,0.121212], + "T":[0.131313,0.474747,0.323232,0.454545,0.282828,0.131313,0.272727,0.171717,0.30303,0.292929,0.383838,0.252525,0.353535,0.292929,0.323232,0.30303,0.323232,0.212121,0.232323,0.363636,0.262626,0.171717,0.363636,0.30303,0.222222,0.292929,0.272727,0.323232,0.191919,0.313131,0.242424,0.222222,0.343434,0.191919,0.20202,0.181818,0.262626,0.262626,0.181818,0.333333,0.242424,0.262626,0.171717,0.30303,0.191919,0.30303,0.141414,0.333333,0.313131,0.20202,0.292929,0.131313,0.272727,0.313131,0.292929,0.282828,0.252525,0.212121,0.20202,0.252525,0.292929,0.262626,0.20202,0.232323,0.232323,0.262626,0.232323,0.181818,0.222222,0.252525,0.10101,0.121212,0.272727,0.242424,0.232323,0.232323,0.262626,0.151515,0.242424,0.131313,0.30303,0.171717,0.242424,0.161616,0.171717,0.252525,0.212121,0.191919,0.191919,0.282828,0.171717,0.333333,0.171717,0.292929,0.161616,0.242424,0.161616,0.232323,0.151515,0.292929,0.141414,0.292929,0.262626,0.191919,0.111111,0.212121,0.212121,0.181818,0.282828,0.191919,0.191919,0.151515,0.222222,0.151515,0.20202,0.161616,0.272727,0.262626,0.242424,0.292929,0.191919,0.343434,0.171717,0.242424,0.272727,0.313131,0.363636,0.191919,0.232323,0.323232,0.191919,0.282828,0.181818,0.282828,0.292929,0.272727,0.272727,0.262626,0.272727,0.272727,0.292929,0.151515,0.262626,0.232323,0.292929,0.191919,0.232323,0.222222,0.252525,0.343434,0.151515,0.373737,0.212121,0.252525,0.333333,0.252525,0.232323,0.252525,0.222222,0.232323,0.191919,0.272727,0.20202,0.272727,0.343434,0.141414,0.30303,0.292929,0.353535,0.272727,0.161616,0.242424,0.252525,0.222222,0.131313,0.222222,0.272727,0.242424,0.353535,0.222222,0.242424,0.242424,0.30303,0.242424,0.191919,0.212121,0.222222,0.222222,0.242424,0.232323,0.222222,0.252525,0.313131,0.212121,0.353535,0.272727,0.383838,0.272727,0.333333,0.252525,0.30303,0.333333,0.282828,0.212121,0.393939,0.262626,0.363636,0.242424,0.464646,0.222222,0.30303,0.282828,0.323232,0.343434,0.242424,0.393939,0.262626,0.343434,0.383838,0.252525,0.353535,0.383838,0.252525,0.333333,0.191919,0.313131,0.353535,0.20202,0.343434,0.292929,0.222222,0.40404,0.262626,0.363636,0.40404,0.262626,0.424242,0.242424,0.565657,0.333333,0.40404,0.363636,0.353535,0.454545,0.333333,0.282828,0.424242,0.353535,0.30303,0.343434,0.30303], + "C":[0.323232,0.171717,0.252525,0.323232,0.242424,0.262626,0.131313,0.161616,0.343434,0.131313,0.151515,0.242424,0.171717,0.242424,0.191919,0.141414,0.262626,0.30303,0.252525,0.212121,0.181818,0.30303,0.212121,0.141414,0.232323,0.212121,0.181818,0.121212,0.272727,0.212121,0.292929,0.191919,0.232323,0.171717,0.222222,0.252525,0.181818,0.262626,0.414141,0.141414,0.262626,0.272727,0.282828,0.262626,0.252525,0.212121,0.282828,0.212121,0.323232,0.20202,0.292929,0.222222,0.272727,0.181818,0.222222,0.20202,0.232323,0.383838,0.20202,0.262626,0.222222,0.191919,0.242424,0.20202,0.171717,0.262626,0.20202,0.272727,0.171717,0.121212,0.414141,0.262626,0.181818,0.323232,0.10101,0.282828,0.20202,0.30303,0.252525,0.181818,0.252525,0.252525,0.252525,0.383838,0.20202,0.464646,0.151515,0.242424,0.252525,0.222222,0.30303,0.131313,0.40404,0.151515,0.353535,0.262626,0.272727,0.313131,0.373737,0.151515,0.333333,0.141414,0.262626,0.282828,0.343434,0.323232,0.323232,0.323232,0.282828,0.313131,0.333333,0.282828,0.242424,0.313131,0.232323,0.282828,0.20202,0.141414,0.30303,0.242424,0.353535,0.252525,0.474747,0.313131,0.242424,0.191919,0.161616,0.353535,0.262626,0.191919,0.393939,0.272727,0.333333,0.181818,0.282828,0.333333,0.222222,0.292929,0.323232,0.242424,0.242424,0.323232,0.232323,0.333333,0.262626,0.151515,0.232323,0.323232,0.242424,0.323232,0.282828,0.212121,0.20202,0.212121,0.282828,0.232323,0.343434,0.333333,0.151515,0.313131,0.282828,0.191919,0.262626,0.191919,0.161616,0.353535,0.282828,0.232323,0.232323,0.232323,0.30303,0.222222,0.171717,0.242424,0.191919,0.363636,0.242424,0.262626,0.20202,0.252525,0.161616,0.212121,0.151515,0.30303,0.323232,0.212121,0.131313,0.181818,0.232323,0.282828,0.212121,0.252525,0.262626,0.333333,0.272727,0.232323,0.20202,0.191919,0.171717,0.262626,0.191919,0.222222,0.181818,0.282828,0.232323,0.252525,0.222222,0.323232,0.20202,0.141414,0.141414,0.262626,0.121212,0.242424,0.222222,0.171717,0.30303,0.232323,0.181818,0.232323,0.242424,0.20202,0.222222,0.20202,0.323232,0.20202,0.222222,0.20202,0.272727,0.323232,0.262626,0.232323,0.252525,0.262626,0.10101,0.20202,0.181818,0.252525,0.0808081,0.252525,0.212121,0.272727,0.151515,0.242424,0.232323,0.242424,0.131313,0.161616,0.222222,0.20202,0.171717], + "G":[0.313131,0.10101,0.0909091,0.0909091,0.10101,0.161616,0.323232,0.181818,0.161616,0.222222,0.282828,0.222222,0.191919,0.242424,0.252525,0.20202,0.121212,0.181818,0.212121,0.20202,0.191919,0.131313,0.111111,0.191919,0.161616,0.131313,0.222222,0.252525,0.232323,0.131313,0.141414,0.20202,0.151515,0.20202,0.222222,0.161616,0.171717,0.242424,0.181818,0.232323,0.20202,0.181818,0.161616,0.232323,0.181818,0.222222,0.181818,0.20202,0.10101,0.10101,0.131313,0.222222,0.272727,0.252525,0.171717,0.151515,0.232323,0.171717,0.262626,0.191919,0.252525,0.20202,0.292929,0.262626,0.212121,0.141414,0.212121,0.151515,0.222222,0.222222,0.191919,0.282828,0.242424,0.131313,0.212121,0.252525,0.191919,0.262626,0.262626,0.292929,0.262626,0.282828,0.141414,0.232323,0.212121,0.161616,0.181818,0.313131,0.292929,0.252525,0.232323,0.323232,0.131313,0.252525,0.171717,0.151515,0.252525,0.232323,0.20202,0.262626,0.252525,0.363636,0.161616,0.222222,0.191919,0.252525,0.262626,0.212121,0.242424,0.282828,0.222222,0.161616,0.313131,0.353535,0.252525,0.353535,0.212121,0.353535,0.242424,0.272727,0.20202,0.232323,0.10101,0.343434,0.212121,0.252525,0.222222,0.292929,0.262626,0.232323,0.242424,0.242424,0.333333,0.313131,0.262626,0.141414,0.292929,0.292929,0.222222,0.292929,0.252525,0.353535,0.272727,0.232323,0.242424,0.40404,0.30303,0.333333,0.232323,0.212121,0.343434,0.252525,0.343434,0.282828,0.171717,0.353535,0.191919,0.20202,0.434343,0.212121,0.393939,0.20202,0.30303,0.20202,0.363636,0.30303,0.252525,0.313131,0.20202,0.272727,0.30303,0.30303,0.333333,0.333333,0.333333,0.242424,0.252525,0.30303,0.20202,0.30303,0.383838,0.191919,0.272727,0.282828,0.333333,0.363636,0.40404,0.30303,0.333333,0.242424,0.282828,0.131313,0.242424,0.242424,0.212121,0.262626,0.232323,0.393939,0.262626,0.232323,0.252525,0.212121,0.323232,0.242424,0.212121,0.212121,0.191919,0.313131,0.151515,0.454545,0.272727,0.222222,0.343434,0.252525,0.252525,0.262626,0.161616,0.242424,0.242424,0.232323,0.20202,0.191919,0.333333,0.272727,0.343434,0.282828,0.262626,0.252525,0.161616,0.151515,0.313131,0.111111,0.262626,0.232323,0.323232,0.242424,0.232323,0.292929,0.171717,0.141414,0.171717,0.10101,0.242424,0.151515,0.191919,0.292929,0.141414,0.262626,0.222222,0.20202,0.40404], + "N":[0.020202,0,0,0,0,0,0,0,0,0,0,0,0,0.010101,0,0,0,0,0,0,0,0,0.010101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.010101,0,0,0.010101,0,0,0,0,0,0,0,0,0.010101,0.010101,0,0.010101,0.010101,0.010101,0.010101,0,0,0,0,0,0,0,0.010101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0], + "GC":[0.636364,0.272727,0.343434,0.414141,0.343434,0.424242,0.454545,0.343434,0.505051,0.353535,0.434343,0.464646,0.363636,0.484848,0.444444,0.343434,0.383838,0.484848,0.464646,0.414141,0.373737,0.434343,0.323232,0.333333,0.393939,0.343434,0.40404,0.373737,0.505051,0.343434,0.434343,0.393939,0.383838,0.373737,0.444444,0.414141,0.353535,0.505051,0.59596,0.373737,0.464646,0.454545,0.444444,0.494949,0.434343,0.434343,0.464646,0.414141,0.424242,0.30303,0.424242,0.444444,0.545455,0.434343,0.393939,0.353535,0.464646,0.555556,0.464646,0.454545,0.474747,0.393939,0.535354,0.464646,0.383838,0.40404,0.414141,0.424242,0.393939,0.343434,0.606061,0.545455,0.424242,0.454545,0.313131,0.535354,0.393939,0.565657,0.515152,0.474747,0.515152,0.535354,0.393939,0.616162,0.414141,0.626263,0.333333,0.555556,0.545455,0.474747,0.535354,0.454545,0.535354,0.40404,0.525253,0.414141,0.525253,0.545455,0.575758,0.414141,0.585859,0.505051,0.424242,0.505051,0.535354,0.575758,0.585859,0.535354,0.525253,0.59596,0.555556,0.444444,0.555556,0.666667,0.484848,0.636364,0.414141,0.494949,0.545455,0.515152,0.555556,0.484848,0.575758,0.656566,0.454545,0.444444,0.383838,0.646465,0.525253,0.424242,0.636364,0.515152,0.666667,0.494949,0.545455,0.474747,0.515152,0.585859,0.545455,0.535354,0.494949,0.676768,0.505051,0.565657,0.505051,0.555556,0.535354,0.656566,0.474747,0.535354,0.626263,0.464646,0.545455,0.494949,0.454545,0.585859,0.535354,0.535354,0.585859,0.525253,0.676768,0.393939,0.565657,0.393939,0.525253,0.656566,0.535354,0.545455,0.434343,0.505051,0.606061,0.525253,0.505051,0.575758,0.525253,0.606061,0.494949,0.565657,0.40404,0.555556,0.545455,0.40404,0.424242,0.585859,0.656566,0.575758,0.535354,0.484848,0.565657,0.525253,0.494949,0.383838,0.505051,0.575758,0.484848,0.494949,0.434343,0.585859,0.434343,0.494949,0.444444,0.434343,0.505051,0.525253,0.444444,0.464646,0.414141,0.636364,0.353535,0.59596,0.414141,0.484848,0.464646,0.494949,0.474747,0.434343,0.464646,0.474747,0.424242,0.464646,0.444444,0.393939,0.555556,0.474747,0.666667,0.484848,0.484848,0.454545,0.434343,0.474747,0.575758,0.343434,0.515152,0.494949,0.424242,0.444444,0.414141,0.545455,0.252525,0.393939,0.383838,0.373737,0.393939,0.393939,0.424242,0.535354,0.272727,0.424242,0.444444,0.40404,0.575758] + }, + "kmer_count": { + "AAAAA":11, "AAAAT":46, "AAAAC":41, "AAAAG":1, "AAATA":170, "AAATT":0, "AAATC":0, "AAATG":45, "AAACA":4, "AAACT":0, "AAACC":40, "AAACG":0, "AAAGA":42, "AAAGT":23, "AAAGC":2, "AAAGG":0, + "AATAA":85, "AATAT":49, "AATAC":45, "AATAG":127, "AATTA":44, "AATTT":0, "AATTC":1, "AATTG":3, "AATCA":40, "AATCT":1, "AATCC":0, "AATCG":1, "AATGA":1, "AATGT":0, "AATGC":94, "AATGG":1, + "AACAA":2, "AACAT":6, "AACAC":30, "AACAG":0, "AACTA":1, "AACTT":0, "AACTC":1, "AACTG":17, "AACCA":61, "AACCT":44, "AACCC":1, "AACCG":0, "AACGA":1, "AACGT":54, "AACGC":1, "AACGG":4, + "AAGAA":1, "AAGAT":1, "AAGAC":89, "AAGAG":0, "AAGTA":36, "AAGTT":2, "AAGTC":0, "AAGTG":25, "AAGCA":15, "AAGCT":1, "AAGCC":1, "AAGCG":0, "AAGGA":0, "AAGGT":0, "AAGGC":1, "AAGGG":28, + "ATAAA":76, "ATAAT":40, "ATAAC":8, "ATAAG":47, "ATATA":2, "ATATT":47, "ATATC":2, "ATATG":1, "ATACA":33, "ATACT":51, "ATACC":48, "ATACG":0, "ATAGA":44, "ATAGT":0, "ATAGC":97, "ATAGG":128, + "ATTAA":113, "ATTAT":46, "ATTAC":15, "ATTAG":1, "ATTTA":75, "ATTTT":53, "ATTTC":3, "ATTTG":55, "ATTCA":4, "ATTCT":4, "ATTCC":39, "ATTCG":0, "ATTGA":36, "ATTGT":3, "ATTGC":54, "ATTGG":1, + "ATCAA":42, "ATCAT":1, "ATCAC":157, "ATCAG":2, "ATCTA":11, "ATCTT":3, "ATCTC":3, "ATCTG":108, "ATCCA":39, "ATCCT":38, "ATCCC":1, "ATCCG":26, "ATCGA":1, "ATCGT":39, "ATCGC":71, "ATCGG":1, + "ATGAA":3, "ATGAT":0, "ATGAC":10, "ATGAG":39, "ATGTA":0, "ATGTT":28, "ATGTC":103, "ATGTG":2, "ATGCA":97, "ATGCT":50, "ATGCC":0, "ATGCG":0, "ATGGA":97, "ATGGT":1, "ATGGC":1, "ATGGG":4, + "ACAAA":4, "ACAAT":1, "ACAAC":0, "ACAAG":15, "ACATA":53, "ACATT":2, "ACATC":99, "ACATG":0, "ACACA":47, "ACACT":26, "ACACC":45, "ACACG":45, "ACAGA":45, "ACAGT":3, "ACAGC":0, "ACAGG":64, + "ACTAA":8, "ACTAT":1, "ACTAC":0, "ACTAG":1, "ACTTA":7, "ACTTT":22, "ACTTC":37, "ACTTG":11, "ACTCA":54, "ACTCT":0, "ACTCC":0, "ACTCG":1, "ACTGA":0, "ACTGT":21, "ACTGC":43, "ACTGG":0, + "ACCAA":45, "ACCAT":1, "ACCAC":53, "ACCAG":8, "ACCTA":69, "ACCTT":0, "ACCTC":1, "ACCTG":50, "ACCCA":3, "ACCCT":114, "ACCCC":46, "ACCCG":0, "ACCGA":2, "ACCGT":0, "ACCGC":1, "ACCGG":0, + "ACGAA":44, "ACGAT":51, "ACGAC":2, "ACGAG":15, "ACGTA":36, "ACGTT":65, "ACGTC":0, "ACGTG":19, "ACGCA":0, "ACGCT":74, "ACGCC":0, "ACGCG":53, "ACGGA":0, "ACGGT":1, "ACGGC":1, "ACGGG":53, + "AGAAA":1, "AGAAT":0, "AGAAC":2, "AGAAG":1, "AGATA":43, "AGATT":1, "AGATC":5, "AGATG":11, "AGACA":90, "AGACT":0, "AGACC":43, "AGACG":97, "AGAGA":2, "AGAGT":2, "AGAGC":45, "AGAGG":1, + "AGTAA":28, "AGTAT":77, "AGTAC":0, "AGTAG":10, "AGTTA":3, "AGTTT":1, "AGTTC":5, "AGTTG":4, "AGTCA":0, "AGTCT":0, "AGTCC":0, "AGTCG":1, "AGTGA":14, "AGTGT":18, "AGTGC":2, "AGTGG":49, + "AGCAA":1, "AGCAT":68, "AGCAC":51, "AGCAG":0, "AGCTA":14, "AGCTT":1, "AGCTC":99, "AGCTG":0, "AGCCA":0, "AGCCT":2, "AGCCC":43, "AGCCG":55, "AGCGA":12, "AGCGT":45, "AGCGC":0, "AGCGG":2, + "AGGAA":49, "AGGAT":38, "AGGAC":3, "AGGAG":1, "AGGTA":1, "AGGTT":20, "AGGTC":55, "AGGTG":36, "AGGCA":39, "AGGCT":2, "AGGCC":0, "AGGCG":9, "AGGGA":0, "AGGGT":118, "AGGGC":1, "AGGGG":40, + "TAAAA":42, "TAAAT":124, "TAAAC":0, "TAAAG":22, "TAATA":119, "TAATT":42, "TAATC":1, "TAATG":5, "TAACA":26, "TAACT":1, "TAACC":54, "TAACG":0, "TAAGA":47, "TAAGT":29, "TAAGC":0, "TAAGG":30, + "TATAA":1, "TATAT":2, "TATAC":30, "TATAG":2, "TATTA":113, "TATTT":134, "TATTC":1, "TATTG":37, "TATCA":54, "TATCT":54, "TATCC":24, "TATCG":71, "TATGA":11, "TATGT":86, "TATGC":0, "TATGG":3, + "TACAA":16, "TACAT":0, "TACAC":29, "TACAG":16, "TACTA":9, "TACTT":44, "TACTC":1, "TACTG":45, "TACCA":45, "TACCT":5, "TACCC":0, "TACCG":1, "TACGA":0, "TACGT":20, "TACGC":0, "TACGG":0, + "TAGAA":1, "TAGAT":3, "TAGAC":42, "TAGAG":2, "TAGTA":28, "TAGTT":6, "TAGTC":1, "TAGTG":12, "TAGCA":54, "TAGCT":12, "TAGCC":44, "TAGCG":0, "TAGGA":50, "TAGGT":58, "TAGGC":0, "TAGGG":92, + "TTAAA":48, "TTAAT":90, "TTAAC":72, "TTAAG":30, "TTATA":32, "TTATT":76, "TTATC":31, "TTATG":21, "TTACA":14, "TTACT":8, "TTACC":2, "TTACG":0, "TTAGA":1, "TTAGT":30, "TTAGC":1, "TTAGG":21, + "TTTAA":30, "TTTAT":42, "TTTAC":1, "TTTAG":45, "TTTTA":14, "TTTTT":9, "TTTTC":52, "TTTTG":5, "TTTCA":0, "TTTCT":4, "TTTCC":0, "TTTCG":52, "TTTGA":48, "TTTGT":6, "TTTGC":0, "TTTGG":54, + "TTCAA":20, "TTCAT":0, "TTCAC":4, "TTCAG":38, "TTCTA":0, "TTCTT":1, "TTCTC":0, "TTCTG":8, "TTCCA":0, "TTCCT":72, "TTCCC":45, "TTCCG":0, "TTCGA":0, "TTCGT":52, "TTCGC":29, "TTCGG":1, + "TTGAA":36, "TTGAT":45, "TTGAC":2, "TTGAG":6, "TTGTA":5, "TTGTT":5, "TTGTC":1, "TTGTG":4, "TTGCA":0, "TTGCT":0, "TTGCC":1, "TTGCG":54, "TTGGA":1, "TTGGT":54, "TTGGC":0, "TTGGG":16, + "TCAAA":41, "TCAAT":18, "TCAAC":0, "TCAAG":2, "TCATA":39, "TCATT":2, "TCATC":35, "TCATG":1, "TCACA":55, "TCACT":2, "TCACC":54, "TCACG":102, "TCAGA":1, "TCAGT":1, "TCAGC":1, "TCAGG":39, + "TCTAA":0, "TCTAT":53, "TCTAC":0, "TCTAG":12, "TCTTA":65, "TCTTT":48, "TCTTC":1, "TCTTG":4, "TCTCA":0, "TCTCT":32, "TCTCC":53, "TCTCG":46, "TCTGA":21, "TCTGT":66, "TCTGC":0, "TCTGG":83, + "TCCAA":0, "TCCAT":91, "TCCAC":0, "TCCAG":46, "TCCTA":80, "TCCTT":2, "TCCTC":1, "TCCTG":42, "TCCCA":1, "TCCCT":0, "TCCCC":45, "TCCCG":46, "TCCGA":26, "TCCGT":0, "TCCGC":0, "TCCGG":48, + "TCGAA":0, "TCGAT":1, "TCGAC":1, "TCGAG":1, "TCGTA":1, "TCGTT":1, "TCGTC":54, "TCGTG":39, "TCGCA":122, "TCGCT":2, "TCGCC":31, "TCGCG":45, "TCGGA":7, "TCGGT":2, "TCGGC":2, "TCGGG":5, + "TGAAA":0, "TGAAT":3, "TGAAC":51, "TGAAG":10, "TGATA":34, "TGATT":41, "TGATC":48, "TGATG":35, "TGACA":1, "TGACT":1, "TGACC":10, "TGACG":20, "TGAGA":4, "TGAGT":43, "TGAGC":2, "TGAGG":42, + "TGTAA":32, "TGTAT":19, "TGTAC":1, "TGTAG":10, "TGTTA":10, "TGTTT":3, "TGTTC":29, "TGTTG":0, "TGTCA":2, "TGTCT":114, "TGTCC":13, "TGTCG":61, "TGTGA":45, "TGTGT":8, "TGTGC":52, "TGTGG":25, + "TGCAA":0, "TGCAT":97, "TGCAC":95, "TGCAG":0, "TGCTA":45, "TGCTT":4, "TGCTC":46, "TGCTG":2, "TGCCA":0, "TGCCT":35, "TGCCC":3, "TGCCG":20, "TGCGA":133, "TGCGT":2, "TGCGC":1, "TGCGG":0, + "TGGAA":2, "TGGAT":54, "TGGAC":2, "TGGAG":100, "TGGTA":53, "TGGTT":72, "TGGTC":2, "TGGTG":4, "TGGCA":1, "TGGCT":1, "TGGCC":0, "TGGCG":0, "TGGGA":1, "TGGGT":5, "TGGGC":21, "TGGGG":72, + "CAAAA":2, "CAAAT":45, "CAAAC":2, "CAAAG":41, "CAATA":15, "CAATT":3, "CAATC":1, "CAATG":45, "CAACA":0, "CAACT":0, "CAACC":1, "CAACG":0, "CAAGA":0, "CAAGT":1, "CAAGC":15, "CAAGG":0, + "CATAA":49, "CATAT":0, "CATAC":7, "CATAG":45, "CATTA":17, "CATTT":53, "CATTC":3, "CATTG":53, "CATCA":52, "CATCT":52, "CATCC":35, "CATCG":39, "CATGA":0, "CATGT":1, "CATGC":52, "CATGG":45, + "CACAA":2, "CACAT":27, "CACAC":106, "CACAG":54, "CACTA":0, "CACTT":31, "CACTC":53, "CACTG":0, "CACCA":0, "CACCT":26, "CACCC":152, "CACCG":0, "CACGA":51, "CACGT":46, "CACGC":53, "CACGG":52, + "CAGAA":0, "CAGAT":52, "CAGAC":45, "CAGAG":1, "CAGTA":50, "CAGTT":3, "CAGTC":0, "CAGTG":2, "CAGCA":0, "CAGCT":0, "CAGCC":2, "CAGCG":45, "CAGGA":41, "CAGGT":53, "CAGGC":10, "CAGGG":39, + "CTAAA":63, "CTAAT":0, "CTAAC":0, "CTAAG":1, "CTATA":0, "CTATT":107, "CTATC":97, "CTATG":52, "CTACA":15, "CTACT":38, "CTACC":1, "CTACG":25, "CTAGA":0, "CTAGT":15, "CTAGC":0, "CTAGG":2, + "CTTAA":47, "CTTAT":65, "CTTAC":8, "CTTAG":2, "CTTTA":28, "CTTTT":0, "CTTTC":1, "CTTTG":45, "CTTCA":38, "CTTCT":1, "CTTCC":0, "CTTCG":0, "CTTGA":1, "CTTGT":5, "CTTGC":0, "CTTGG":15, + "CTCAA":1, "CTCAT":36, "CTCAC":52, "CTCAG":1, "CTCTA":1, "CTCTT":32, "CTCTC":53, "CTCTG":2, "CTCCA":97, "CTCCT":0, "CTCCC":45, "CTCCG":48, "CTCGA":0, "CTCGT":1, "CTCGC":46, "CTCGG":4, + "CTGAA":10, "CTGAT":0, "CTGAC":20, "CTGAG":1, "CTGTA":48, "CTGTT":0, "CTGTC":83, "CTGTG":47, "CTGCA":0, "CTGCT":1, "CTGCC":56, "CTGCG":44, "CTGGA":52, "CTGGT":30, "CTGGC":0, "CTGGG":54, + "CCAAA":45, "CCAAT":0, "CCAAC":0, "CCAAG":0, "CCATA":7, "CCATT":0, "CCATC":40, "CCATG":52, "CCACA":45, "CCACT":52, "CCACC":1, "CCACG":3, "CCAGA":52, "CCAGT":1, "CCAGC":46, "CCAGG":0, + "CCTAA":42, "CCTAT":139, "CCTAC":73, "CCTAG":2, "CCTTA":49, "CCTTT":0, "CCTTC":0, "CCTTG":1, "CCTCA":36, "CCTCT":0, "CCTCC":0, "CCTCG":2, "CCTGA":10, "CCTGT":86, "CCTGC":38, "CCTGG":0, + "CCCAA":0, "CCCAT":6, "CCCAC":48, "CCCAG":45, "CCCTA":105, "CCCTT":47, "CCCTC":0, "CCCTG":11, "CCCCA":45, "CCCCT":47, "CCCCC":90, "CCCCG":0, "CCCGA":0, "CCCGT":43, "CCCGC":2, "CCCGG":1, + "CCGAA":1, "CCGAT":2, "CCGAC":43, "CCGAG":3, "CCGTA":0, "CCGTT":0, "CCGTC":0, "CCGTG":44, "CCGCA":0, "CCGCT":1, "CCGCC":1, "CCGCG":2, "CCGGA":52, "CCGGT":1, "CCGGC":46, "CCGGG":5, + "CGAAA":45, "CGAAT":0, "CGAAC":6, "CGAAG":0, "CGATA":89, "CGATT":0, "CGATC":13, "CGATG":52, "CGACA":72, "CGACT":0, "CGACC":5, "CGACG":17, "CGAGA":55, "CGAGT":1, "CGAGC":15, "CGAGG":1, + "CGTAA":0, "CGTAT":1, "CGTAC":0, "CGTAG":36, "CGTTA":1, "CGTTT":1, "CGTTC":62, "CGTTG":0, "CGTCA":0, "CGTCT":98, "CGTCC":1, "CGTCG":0, "CGTGA":81, "CGTGT":19, "CGTGC":44, "CGTGG":2, + "CGCAA":45, "CGCAT":0, "CGCAC":28, "CGCAG":50, "CGCTA":1, "CGCTT":1, "CGCTC":2, "CGCTG":73, "CGCCA":0, "CGCCT":30, "CGCCC":0, "CGCCG":2, "CGCGA":54, "CGCGT":44, "CGCGC":0, "CGCGG":2, + "CGGAA":1, "CGGAT":8, "CGGAC":0, "CGGAG":51, "CGGTA":1, "CGGTT":2, "CGGTC":1, "CGGTG":2, "CGGCA":0, "CGGCT":47, "CGGCC":1, "CGGCG":2, "CGGGA":53, "CGGGT":2, "CGGGC":4, "CGGGG":5, + "GAAAA":45, "GAAAT":0, "GAAAC":1, "GAAAG":2, "GAATA":1, "GAATT":1, "GAATC":40, "GAATG":1, "GAACA":8, "GAACT":17, "GAACC":9, "GAACG":59, "GAAGA":1, "GAAGT":10, "GAAGC":0, "GAAGG":0, + "GATAA":36, "GATAT":2, "GATAC":50, "GATAG":95, "GATTA":0, "GATTT":1, "GATTC":41, "GATTG":0, "GATCA":54, "GATCT":19, "GATCC":44, "GATCG":1, "GATGA":40, "GATGT":44, "GATGC":1, "GATGG":53, + "GACAA":0, "GACAT":120, "GACAC":1, "GACAG":45, "GACTA":0, "GACTT":1, "GACTC":0, "GACTG":2, "GACCA":1, "GACCT":46, "GACCC":10, "GACCG":2, "GACGA":60, "GACGT":0, "GACGC":73, "GACGG":1, + "GAGAA":2, "GAGAT":5, "GAGAC":54, "GAGAG":47, "GAGTA":1, "GAGTT":2, "GAGTC":0, "GAGTG":45, "GAGCA":51, "GAGCT":99, "GAGCC":53, "GAGCG":14, "GAGGA":0, "GAGGT":1, "GAGGC":39, "GAGGG":4, + "GTAAA":0, "GTAAT":36, "GTAAC":1, "GTAAG":28, "GTATA":1, "GTATT":57, "GTATC":73, "GTATG":28, "GTACA":0, "GTACT":1, "GTACC":0, "GTACG":0, "GTAGA":4, "GTAGT":2, "GTAGC":12, "GTAGG":49, + "GTTAA":51, "GTTAT":4, "GTTAC":0, "GTTAG":2, "GTTTA":2, "GTTTT":22, "GTTTC":0, "GTTTG":3, "GTTCA":20, "GTTCT":1, "GTTCC":79, "GTTCG":30, "GTTGA":4, "GTTGT":2, "GTTGC":1, "GTTGG":1, + "GTCAA":0, "GTCAT":40, "GTCAC":0, "GTCAG":1, "GTCTA":53, "GTCTT":83, "GTCTC":76, "GTCTG":55, "GTCCA":1, "GTCCT":14, "GTCCC":1, "GTCCG":0, "GTCGA":2, "GTCGT":2, "GTCGC":53, "GTCGG":10, + "GTGAA":15, "GTGAT":114, "GTGAC":1, "GTGAG":45, "GTGTA":9, "GTGTT":9, "GTGTC":4, "GTGTG":79, "GTGCA":95, "GTGCT":46, "GTGCC":1, "GTGCG":38, "GTGGA":8, "GTGGT":45, "GTGGC":1, "GTGGG":25, + "GCAAA":0, "GCAAT":45, "GCAAC":1, "GCAAG":0, "GCATA":0, "GCATT":121, "GCATC":0, "GCATG":45, "GCACA":43, "GCACT":1, "GCACC":79, "GCACG":52, "GCAGA":0, "GCAGT":50, "GCAGC":0, "GCAGG":40, + "GCTAA":14, "GCTAT":63, "GCTAC":1, "GCTAG":2, "GCTTA":1, "GCTTT":0, "GCTTC":1, "GCTTG":5, "GCTCA":1, "GCTCT":56, "GCTCC":138, "GCTCG":2, "GCTGA":1, "GCTGT":4, "GCTGC":20, "GCTGG":53, + "GCCAA":0, "GCCAT":1, "GCCAC":0, "GCCAG":0, "GCCTA":1, "GCCTT":1, "GCCTC":35, "GCCTG":31, "GCCCA":51, "GCCCT":1, "GCCCC":0, "GCCCG":0, "GCCGA":21, "GCCGT":1, "GCCGC":1, "GCCGG":55, + "GCGAA":6, "GCGAT":100, "GCGAC":46, "GCGAG":54, "GCGTA":0, "GCGTT":1, "GCGTC":45, "GCGTG":45, "GCGCA":1, "GCGCT":0, "GCGCC":0, "GCGCG":0, "GCGGA":1, "GCGGT":2, "GCGGC":1, "GCGGG":1, + "GGAAA":2, "GGAAT":39, "GGAAC":34, "GGAAG":1, "GGATA":17, "GGATT":1, "GGATC":54, "GGATG":41, "GGACA":2, "GGACT":2, "GGACC":1, "GGACG":0, "GGAGA":48, "GGAGT":2, "GGAGC":155, "GGAGG":1, + "GGTAA":3, "GGTAT":55, "GGTAC":0, "GGTAG":12, "GGTTA":43, "GGTTT":23, "GGTTC":33, "GGTTG":4, "GGTCA":38, "GGTCT":56, "GGTCC":1, "GGTCG":5, "GGTGA":35, "GGTGT":56, "GGTGC":81, "GGTGG":7, + "GGCAA":0, "GGCAT":0, "GGCAC":1, "GGCAG":40, "GGCTA":19, "GGCTT":1, "GGCTC":50, "GGCTG":3, "GGCCA":1, "GGCCT":1, "GGCCC":4, "GGCCG":1, "GGCGA":7, "GGCGT":0, "GGCGC":0, "GGCGG":2, + "GGGAA":24, "GGGAT":14, "GGGAC":0, "GGGAG":54, "GGGTA":15, "GGGTT":5, "GGGTC":43, "GGGTG":137, "GGGCA":1, "GGGCT":23, "GGGCC":5, "GGGCG":0, "GGGGA":38, "GGGGT":75, "GGGGC":3, "GGGGG":145 + }, + "overrepresented_sequences": { + } + }, + "read2_after_filtering": { + "total_reads": 97, + "total_bases": 22942, + "q20_bases": 21535, + "q30_bases": 20672, + "total_cycles": 251, + "quality_curves": { + "A":[32.8571,33.24,33.1875,33,32.9189,36.1136,36.6667,36.0435,36.5263,35.9429,36.7222,36.3929,37.7857,37.3,37.8696,38,37.8214,37.6786,37.8276,37.9545,37.8889,37.9211,38.7333,38.5714,38.7568,38.8889,38.1613,38.6667,38.4667,38.4412,38.2903,38.7297,38.4074,38.8537,38.5429,38.675,38.3947,38.5652,38.4762,38.5517,37.8571,38.6071,38.3421,37.1053,38.2857,38.48,38.4737,38.4,38.8,38.6667,38.5,38.5854,38.0556,38.4167,38.6333,38.2778,38.5556,38.3478,38.8485,37.7143,38.5217,38.4118,38.5385,38.2759,38.0789,37.7576,38.7273,38.4103,37.25,37.8462,38.2759,38.5152,37.5517,36.2759,38.25,35.6087,37.8485,36.4074,37.125,37.0513,36.5556,38.4138,37.0857,38.1818,37.5366,38.5455,37.75,37.16,38.12,38,37.6897,37.9524,38.1379,38.069,37.5333,38.1176,37.9032,38.5714,36.9231,37.6552,37.7037,36.55,38.2333,38.3333,38.3824,37.1429,38.3333,37.2692,37.5556,37.35,38.087,37.8205,37.6,36.9412,37.6667,38,37.4333,37.2273,36.9048,36.3333,38.4348,37.2941,37.44,35.4,36.5556,36.6087,37.8,37.2667,37.8333,36.4167,38.4118,35.7,35.6,37.9545,35.6875,36.875,36.381,34.3333,34.1176,36.7895,35.5238,35.7647,33.2609,30.7895,32.3,33.7083,35.5909,34.6667,36.12,37.25,36.2857,34.625,33.7826,35.36,35.6316,35.5,37.2273,34.5238,34.2632,34.6522,33.1538,34.4545,34.4348,35.25,34.3077,35.4737,37.125,36.2,32.35,34,34.6957,28.9048,33.3043,31.6,32.9375,31.0667,31.5238,31.4706,33.2609,34.65,34.2105,35.7353,32,32.6471,31,31.7222,30.7143,32.75,27.6111,25.0417,33.1429,31.5714,30.5625,33,30.0714,31.9,30.75,33,31.1579,32.3043,31.375,24,28.0526,32.2,26.8333,29.6522,31.5,30.1111,25.4667,29.2857,30.9524,28.7895,28.3333,29.2727,24.9091,28.2308,29.0435,29.0667,32.1765,27.12,29.7778,26.3889,27.8125,25.8,28.2727,30.2353,28.5,27.9333,29.3889,27.0526,31.9231,31.4118,29.9474,31.5714,28.1,29.0417,30.9167,24.1667,23.5455,27.9048,25.4167,25.5,26.125,28,30.5333,22.2,23.9474,27.6429,27.0625,28.8333,14], + "T":[33.4167,33.3043,33.4688,33.4222,33.2593,34.6364,36.8846,37,36.4,36.6207,36.0263,36.875,37.9118,37.7931,37.9677,37.9655,37.9375,37.1429,37.9565,37.5556,37.9615,38,38.7222,38.8,38.5,38.6071,38.963,38.7188,38.7368,38.4839,38.5833,38.7143,38.7647,38.8421,38.6,38.6111,38.2,38.8,38.3889,38.0625,38.25,38.4231,36.8,37.8276,38.5789,37.5,38.7692,38.0323,37.7667,37.5,38.7931,38.5385,38.7037,38.1667,38.7143,38.4074,38.4,38.7143,36.3158,37.72,38.9286,37.6154,38.3,38.2174,38.3636,38.6154,38.2174,36.1765,35.8182,36.84,38.7778,34,38.7778,37.913,38.2273,38.2381,37.3846,38.2667,38.2917,37.75,37.3103,37.8125,37.2174,36.8,37.75,37.24,37.2857,37.2632,37.1053,38.4286,38.5882,37.9688,38,38.5,38.4,38.5417,37.4667,38.3478,38.2,36.5714,37.6154,37.9643,38.1154,38.5556,36.5455,38.381,36.5714,38.1667,37.9286,37.8421,35.2632,38.2667,37.4545,36.0714,36.65,36.625,36.6923,37,38.3478,37.6786,37.3684,38.4375,35.5294,38.3043,37.28,37.4194,36.3529,34.5263,37.1818,37.2812,37.2222,37.6071,38.2222,36.7037,36.4643,36.8462,37.2963,37.76,36.5185,37.037,35.7778,34.8571,37.6667,35.9091,37.7037,31.5556,36.9545,36.45,35.7917,35.4062,37.2857,35.6389,33.5,35.2917,35.3125,36.4783,36.3182,34.3043,36.2857,33.619,35.7647,34.8,37.55,36.375,35.875,37.1538,32.4286,36.2593,32.1471,33.44,36.3571,34.7273,37.1429,34.9,33.1,32.9048,34,33,34.4516,32.8095,34.5909,31.0952,35.0357,33.7619,32.5,29.85,31.35,29.8333,31.0476,32,30.8947,31.4545,34.4286,33.0588,33.7097,34.1429,30.3429,32.1818,32.8276,31,32.087,31.2667,33.05,31.625,28.2727,32.2174,31.2333,31.4444,31.8684,32.75,29.4167,32.5,31.2333,30.6897,33.9091,30.4688,33.8182,30.931,32.0882,33.2353,31.2414,35.1212,30.25,31.0714,32.9375,29.28,32.931,29.7222,30.2414,30.0435,32.7059,31.1143,25.4667,30.8,28.0357,27.5,29.4516,29.75,29.9767,27.381,27.9655,27.0952,29.0385,29.9667,26.7917,29.5909,26.5294,28.1923,26.88,25.5294,22.9167], + "C":[33.2188,33.5625,33.56,33.8667,33.5217,36.5,36.5,35.25,35.303,36,35.8667,36.8696,36.8125,37.9167,37.9444,38,38,37.4,38,38,37.9375,37.9667,38.65,38.8571,37.8696,38.25,38.7778,38.5833,38.84,38.5789,38.5714,38.2632,38.8571,37.7647,38.5714,38.7917,38.6471,37.7692,38.275,36.3077,38.84,38.68,38.5,38.3462,37.32,38.2857,38.3214,38.2381,37.7188,37.95,38.1379,37.4545,37.3846,38.3889,38.3182,38.5789,38.5217,38.0811,37.95,38.4615,38.4091,38.4737,38.2917,38.1,38.1176,38.04,37.5,38.5,38.2941,38.3333,37.8537,37.6154,38.1765,37.625,37.9,37.8571,36.6316,38.3667,37.625,38.2353,38.1667,36.92,37.52,37.5,37.95,37.587,37.9333,38.2174,38.0417,37.9091,38,38.2308,38.2308,38.0667,37.7143,38.6538,38.7037,37.3871,37.5135,35.4667,37.4375,36.7857,38.16,38.1429,38.0303,38.1613,36.4688,38.25,37.3571,36.7667,37.7273,36.037,37,36.9355,37.1739,34.8571,37.05,36.9286,36.8276,36.6667,37.8286,38.04,37.9111,38.0645,36.9583,38.1111,37.9375,37.4,36.6538,36.6316,37.4615,37.9259,35.6667,33.6111,37.3214,36.3636,37.6818,36.0714,36.9355,35.8636,37.6667,36.0968,35.2174,36.1875,36.1538,37.2857,36.2174,36.2903,35.375,36.7188,36.9286,36,36.4737,35.45,34.2857,36.6957,35.6875,36.7188,35.7333,35.5333,36.5,35.3158,35.2083,35.7895,36.4375,36,35.64,35.087,32.9545,34.8095,33.3929,33.7368,36.9375,34.6667,34.5,34.1176,31.9167,36.2273,33.4211,32.8182,34.3333,36.75,34.7692,36.24,35.1935,32.55,34.7273,35,30.8421,32.875,32.4118,31.4167,31.5455,32.0333,31.2609,33.15,36.2,33.6875,29.6154,32.2857,32.8667,33.1875,30.4,33.32,31.7895,29.25,31.0588,32.48,31.1176,34.7,30.9091,30.2857,32.7,27.4444,29.9412,31.7692,29.7391,33.8889,34.3,32.3333,33.8333,27.5625,26.6923,30.9333,32.0385,31.8333,27.9333,32.4667,28.1111,28.25,29.9583,29.5,30.8235,26.95,31.2857,24.5,31.5,30.4375,30,30.5,25.1429,23.6316,23.6667,31.0625,27,27.5294,22.375,23.5,32.5,26.4444,22.5], + "G":[32.0645,31.1,32.875,33.4444,32.4,36.375,35.1562,35.6111,35.6667,36.2381,35.8462,36.0455,38,37.6667,37.76,37.95,37.6667,38,37.8095,37.95,37.7368,38,38.1818,38.7222,38.2667,38.4615,38.9048,38.4783,38.5652,38.0769,38.6429,38.4,37.2,38.55,38.5238,38.2,38.4118,38.2609,38.5556,37.8696,36.05,38,37.5,37.8261,38.1667,37.7143,37.3333,38.25,37.9,38.8889,38.1818,38.3333,38.1538,38.56,38.0588,36.6,38.3182,38.625,38.36,37.7222,38.0417,38.1667,37.5556,37.16,38.15,37.9231,37.7619,35.5333,38.6818,38.0952,38.0556,37.5556,37.6667,37.9231,35.2857,37.04,37.6842,38,38.24,37.931,37.8077,38.037,37.8571,37.5909,37.65,37.2667,36.7647,38.1333,37.931,37.7083,36.9091,38.129,38.3846,37.24,38.0588,37.2308,36.8333,36.7273,37.7895,37.92,37.36,38,37.6875,37.9048,36.6842,37.5,38.0769,36.5238,37.2174,36.1071,37.3636,36,37.6452,37.5714,37.4583,37.5,37.619,37.8,36.2917,37.6296,36,36.0435,37,36.9697,36.8095,36.92,38.0909,37.1071,37.4,37.1364,37.8261,37.2273,37.7742,37.5667,36.12,36.4286,35.8519,36.4483,35.3636,37.1071,36.4167,36.3529,36.3462,36.913,36.2174,35.525,37.3448,37.4545,36.4348,35.5,35.3939,33.7917,35.7353,35.4815,37.1176,35.1471,36.3158,34.8947,35.2,36.8571,34.3846,36.1111,33.4643,34.45,35.3824,35.6333,35.9583,32.3214,29.7647,32.8519,35,35.6667,33.25,34.9677,34.0312,34.6364,36.24,35.8621,32.8947,34.5517,34.3889,33.0588,35.68,34.9286,35.7419,35.6562,33.9474,32.2143,33.3125,33.2174,28.48,32,32,32.75,33.5556,34.6667,35.7895,31.1714,32.9167,32.2,31.4545,31.5294,31.3333,30.3,33.7647,32.6316,30.0625,33.2414,30.2727,31.4878,32.12,33.1765,28.9231,28.2174,29.1053,33.0909,32.9167,30.6111,29.7778,32.3889,32.6923,27.1818,29.7241,30.2,30.92,26.7273,28.9,32.8462,34.4545,29.2222,28.0952,30.8889,29.7273,28.1333,29.3704,25.8947,25.2308,29.3913,26,24.5556,25.75,29.4286,31.5625,23.3333,31.9167,29.1111,26.8,22,24.1538,25,20.88], + "mean":[32.4742,33.1031,33.3505,33.5052,33.1031,36.0928,36.2062,36,35.9381,36.2165,36.0825,36.5464,37.7113,37.6907,37.8866,37.9794,37.8866,37.5361,37.8969,37.8144,37.8866,37.9588,38.6495,38.7113,38.4124,38.6186,38.6598,38.6289,38.6392,38.433,38.4948,38.567,38.4433,38.5979,38.5567,38.6186,38.3918,38.3402,38.3918,37.9278,37.8351,38.4639,38.0103,37.8247,38.0722,37.9691,38.2577,38.2165,38.0309,38.299,38.4433,38.268,38.0825,38.3711,38.4845,38.1134,38.4536,38.3711,38.0412,37.9175,38.4948,38.1649,38.1546,37.9381,38.1649,38.0825,38.1443,37.5979,37.433,37.701,38.1031,37.4948,38.0309,37.3299,37.567,37.1959,37.4536,37.7113,37.8247,37.6082,37.5155,37.8247,37.3402,37.567,37.6804,37.5567,37.5052,37.732,37.8454,38.0309,37.7629,38.0515,38.1856,37.9794,37.8247,38.2474,37.7938,37.7216,37.5155,37.0722,37.5155,37.5155,38.0928,38.2268,37.7216,37.8247,37.268,37.5979,37.5258,36.9072,37.2474,37.0928,37.433,37.0412,37.2887,36.6907,37.1959,37.3299,37.0722,37.1649,37.5052,37.567,37.2784,37.4742,36.8969,37.2268,37.3814,36.732,37.2577,36.9072,37.6701,37.2165,36.8041,36.6804,36.4948,36.6289,36.7835,36.3505,35.9691,36.7396,36.3542,35.9479,35.6667,35.2292,35.8021,34.5833,36.5833,36.5208,35.9271,36.0938,36.3125,35.0833,34.9479,35.3958,35.3958,35.8958,36.3158,35.2842,35.3368,35.1895,35.0421,35.0316,35,35.4737,35.5789,35.9362,35.0108,34.7742,31.9462,33.6989,34.6452,33.5,34.7935,34.1522,33.6413,33.4674,33.5,34.3913,33.6196,33.7609,34.3913,34.4022,34.3152,34.5934,34.3444,32.8889,32.7111,32.4,31.1222,30.6889,31.2135,31.5393,32.3977,32.6207,32.4302,33.5294,32.6706,32.1647,31.9882,31.9643,31.8571,30.0122,30.8148,31.963,30.037,31,31.0247,32.2593,30.3086,31.7531,30.8519,31.1975,30.1358,29.0741,29.45,31.0375,31.1375,31.175,31.8608,30.8718,31.7436,30.4359,28.9615,29.8077,31.3333,29.1579,30.1842,30.0921,30.1447,28.6133,30.4,30.8904,29.1644,29.25,28.8611,27.169,29.2647,28.791,28.5672,27.9104,26.5224,25.8806,28.2239,28.9851,28.597,27.8358,25.303,25.8636,27.25,26.625,21.0938] + }, + "content_curves": { + "A":[0.216495,0.257732,0.329897,0.134021,0.381443,0.453608,0.278351,0.474227,0.195876,0.360825,0.185567,0.28866,0.28866,0.206186,0.237113,0.350515,0.28866,0.28866,0.298969,0.226804,0.371134,0.391753,0.309278,0.360825,0.381443,0.371134,0.319588,0.309278,0.309278,0.350515,0.319588,0.381443,0.278351,0.42268,0.360825,0.412371,0.391753,0.237113,0.216495,0.298969,0.28866,0.28866,0.391753,0.195876,0.360825,0.257732,0.391753,0.257732,0.257732,0.494845,0.28866,0.42268,0.185567,0.247423,0.309278,0.371134,0.278351,0.237113,0.340206,0.28866,0.237113,0.350515,0.268041,0.298969,0.391753,0.340206,0.340206,0.402062,0.371134,0.402062,0.298969,0.340206,0.298969,0.298969,0.453608,0.237113,0.340206,0.278351,0.247423,0.402062,0.185567,0.298969,0.360825,0.226804,0.42268,0.113402,0.453608,0.257732,0.257732,0.237113,0.298969,0.216495,0.298969,0.298969,0.309278,0.350515,0.319588,0.216495,0.268041,0.298969,0.278351,0.206186,0.309278,0.309278,0.350515,0.216495,0.185567,0.268041,0.185567,0.206186,0.237113,0.402062,0.206186,0.175258,0.309278,0.195876,0.309278,0.226804,0.216495,0.185567,0.237113,0.175258,0.257732,0.103093,0.278351,0.237113,0.257732,0.154639,0.247423,0.247423,0.175258,0.206186,0.154639,0.226804,0.164948,0.247423,0.216495,0.154639,0.175258,0.197917,0.21875,0.177083,0.239583,0.197917,0.208333,0.25,0.229167,0.125,0.260417,0.125,0.21875,0.166667,0.239583,0.260417,0.197917,0.166667,0.231579,0.221053,0.2,0.242105,0.136842,0.347368,0.242105,0.336842,0.136842,0.202128,0.172043,0.16129,0.215054,0.215054,0.247312,0.228261,0.25,0.217391,0.347826,0.163043,0.228261,0.184783,0.25,0.217391,0.206522,0.369565,0.282609,0.186813,0.133333,0.2,0.233333,0.311111,0.2,0.266667,0.314607,0.393258,0.181818,0.229885,0.162791,0.235294,0.188235,0.141176,0.223529,0.27381,0.285714,0.231707,0.234568,0.246914,0.148148,0.283951,0.222222,0.111111,0.185185,0.17284,0.259259,0.234568,0.185185,0.135802,0.275,0.1625,0.2875,0.1875,0.21519,0.320513,0.230769,0.230769,0.205128,0.192308,0.141026,0.223684,0.157895,0.394737,0.236842,0.253333,0.173333,0.232877,0.260274,0.0972222,0.138889,0.338028,0.176471,0.179104,0.164179,0.313433,0.179104,0.298507,0.238806,0.179104,0.223881,0.149254,0.287879,0.212121,0.25,0.28125,0.109375], + "T":[0.123711,0.474227,0.329897,0.463918,0.278351,0.113402,0.268041,0.175258,0.309278,0.298969,0.391753,0.247423,0.350515,0.298969,0.319588,0.298969,0.329897,0.216495,0.237113,0.371134,0.268041,0.164948,0.371134,0.309278,0.226804,0.28866,0.278351,0.329897,0.195876,0.319588,0.247423,0.216495,0.350515,0.195876,0.206186,0.185567,0.257732,0.257732,0.185567,0.329897,0.247423,0.268041,0.154639,0.298969,0.195876,0.309278,0.134021,0.319588,0.309278,0.206186,0.298969,0.134021,0.278351,0.309278,0.28866,0.278351,0.257732,0.216495,0.195876,0.257732,0.28866,0.268041,0.206186,0.237113,0.226804,0.268041,0.237113,0.175258,0.226804,0.257732,0.0927835,0.113402,0.278351,0.237113,0.226804,0.216495,0.268041,0.154639,0.247423,0.123711,0.298969,0.164948,0.237113,0.154639,0.164948,0.257732,0.216495,0.195876,0.195876,0.28866,0.175258,0.329897,0.164948,0.28866,0.154639,0.247423,0.154639,0.237113,0.154639,0.28866,0.134021,0.28866,0.268041,0.185567,0.113402,0.216495,0.216495,0.185567,0.28866,0.195876,0.195876,0.154639,0.226804,0.14433,0.206186,0.164948,0.268041,0.268041,0.237113,0.28866,0.195876,0.329897,0.175258,0.237113,0.257732,0.319588,0.350515,0.195876,0.226804,0.329897,0.185567,0.28866,0.185567,0.278351,0.28866,0.268041,0.278351,0.257732,0.278351,0.28125,0.28125,0.145833,0.25,0.229167,0.28125,0.1875,0.229167,0.208333,0.25,0.333333,0.145833,0.375,0.208333,0.25,0.333333,0.239583,0.231579,0.242105,0.221053,0.221053,0.178947,0.263158,0.210526,0.252632,0.336842,0.138298,0.301075,0.290323,0.365591,0.268817,0.150538,0.23913,0.228261,0.217391,0.108696,0.228261,0.23913,0.26087,0.336957,0.228261,0.23913,0.228261,0.304348,0.230769,0.177778,0.222222,0.222222,0.2,0.233333,0.211111,0.213483,0.247191,0.318182,0.195402,0.360465,0.247059,0.411765,0.258824,0.341176,0.238095,0.27381,0.365854,0.246914,0.197531,0.407407,0.283951,0.37037,0.222222,0.469136,0.197531,0.296296,0.296296,0.37037,0.358025,0.275,0.4,0.275,0.3625,0.43038,0.217949,0.371795,0.423077,0.25641,0.358974,0.205128,0.328947,0.381579,0.236842,0.381579,0.306667,0.226667,0.479452,0.205479,0.416667,0.388889,0.253521,0.455882,0.238806,0.641791,0.313433,0.432836,0.313433,0.38806,0.447761,0.358209,0.328358,0.515152,0.393939,0.390625,0.265625,0.375], + "C":[0.329897,0.164948,0.257732,0.309278,0.237113,0.268041,0.123711,0.164948,0.340206,0.123711,0.154639,0.237113,0.164948,0.247423,0.185567,0.14433,0.257732,0.309278,0.247423,0.195876,0.164948,0.309278,0.206186,0.14433,0.237113,0.206186,0.185567,0.123711,0.257732,0.195876,0.28866,0.195876,0.216495,0.175258,0.216495,0.247423,0.175258,0.268041,0.412371,0.134021,0.257732,0.257732,0.28866,0.268041,0.257732,0.216495,0.28866,0.216495,0.329897,0.206186,0.298969,0.226804,0.268041,0.185567,0.226804,0.195876,0.237113,0.381443,0.206186,0.268041,0.226804,0.195876,0.247423,0.206186,0.175258,0.257732,0.206186,0.268041,0.175258,0.123711,0.42268,0.268041,0.175258,0.329897,0.103093,0.28866,0.195876,0.309278,0.247423,0.175258,0.247423,0.257732,0.257732,0.391753,0.206186,0.474227,0.154639,0.237113,0.247423,0.226804,0.298969,0.134021,0.402062,0.154639,0.360825,0.268041,0.278351,0.319588,0.381443,0.154639,0.329897,0.14433,0.257732,0.28866,0.340206,0.319588,0.329897,0.329897,0.28866,0.309278,0.340206,0.278351,0.247423,0.319588,0.237113,0.28866,0.206186,0.14433,0.298969,0.247423,0.360825,0.257732,0.463918,0.319588,0.247423,0.185567,0.164948,0.360825,0.268041,0.195876,0.402062,0.278351,0.340206,0.185567,0.28866,0.340206,0.226804,0.28866,0.319588,0.229167,0.25,0.322917,0.239583,0.333333,0.270833,0.145833,0.239583,0.322917,0.25,0.333333,0.291667,0.208333,0.197917,0.208333,0.291667,0.239583,0.336842,0.336842,0.157895,0.315789,0.273684,0.2,0.252632,0.2,0.168421,0.340426,0.268817,0.247312,0.236559,0.225806,0.301075,0.206522,0.173913,0.228261,0.195652,0.369565,0.26087,0.23913,0.206522,0.23913,0.163043,0.217391,0.141304,0.274725,0.344444,0.222222,0.122222,0.177778,0.211111,0.266667,0.191011,0.269663,0.25,0.344828,0.267442,0.235294,0.176471,0.188235,0.152941,0.25,0.178571,0.195122,0.185185,0.308642,0.234568,0.197531,0.209877,0.308642,0.209877,0.123457,0.135802,0.259259,0.123457,0.222222,0.2125,0.1625,0.2875,0.225,0.126582,0.230769,0.230769,0.205128,0.166667,0.192308,0.333333,0.157895,0.197368,0.197368,0.236842,0.32,0.32,0.164384,0.232877,0.277778,0.0972222,0.140845,0.176471,0.238806,0.104478,0.238806,0.208955,0.283582,0.134328,0.238806,0.238806,0.253731,0.121212,0.151515,0.15625,0.28125,0.125], + "G":[0.319588,0.103093,0.0824742,0.0927835,0.103093,0.164948,0.329897,0.185567,0.154639,0.216495,0.268041,0.226804,0.195876,0.247423,0.257732,0.206186,0.123711,0.185567,0.216495,0.206186,0.195876,0.134021,0.113402,0.185567,0.154639,0.134021,0.216495,0.237113,0.237113,0.134021,0.14433,0.206186,0.154639,0.206186,0.216495,0.154639,0.175258,0.237113,0.185567,0.237113,0.206186,0.185567,0.164948,0.237113,0.185567,0.216495,0.185567,0.206186,0.103093,0.0927835,0.113402,0.216495,0.268041,0.257732,0.175258,0.154639,0.226804,0.164948,0.257732,0.185567,0.247423,0.185567,0.278351,0.257732,0.206186,0.134021,0.216495,0.154639,0.226804,0.216495,0.185567,0.278351,0.247423,0.134021,0.216495,0.257732,0.195876,0.257732,0.257732,0.298969,0.268041,0.278351,0.14433,0.226804,0.206186,0.154639,0.175258,0.309278,0.298969,0.247423,0.226804,0.319588,0.134021,0.257732,0.175258,0.134021,0.247423,0.226804,0.195876,0.257732,0.257732,0.360825,0.164948,0.216495,0.195876,0.247423,0.268041,0.216495,0.237113,0.28866,0.226804,0.164948,0.319588,0.360825,0.247423,0.350515,0.216495,0.360825,0.247423,0.278351,0.206186,0.237113,0.103093,0.340206,0.216495,0.257732,0.226804,0.28866,0.257732,0.226804,0.237113,0.226804,0.319588,0.309278,0.257732,0.14433,0.278351,0.298969,0.226804,0.291667,0.25,0.354167,0.270833,0.239583,0.239583,0.416667,0.302083,0.34375,0.239583,0.208333,0.34375,0.25,0.354167,0.28125,0.177083,0.354167,0.2,0.2,0.421053,0.221053,0.410526,0.189474,0.294737,0.210526,0.357895,0.319149,0.258065,0.301075,0.182796,0.290323,0.301075,0.326087,0.347826,0.336957,0.347826,0.23913,0.271739,0.315217,0.206522,0.315217,0.391304,0.184783,0.271739,0.307692,0.344444,0.355556,0.422222,0.311111,0.355556,0.255556,0.280899,0.0898876,0.25,0.229885,0.209302,0.282353,0.223529,0.411765,0.282353,0.238095,0.261905,0.207317,0.333333,0.246914,0.209877,0.234568,0.197531,0.358025,0.135802,0.506173,0.308642,0.209877,0.320988,0.283951,0.2375,0.275,0.15,0.225,0.227848,0.230769,0.166667,0.141026,0.371795,0.25641,0.320513,0.289474,0.263158,0.171053,0.144737,0.12,0.28,0.123288,0.30137,0.208333,0.375,0.267606,0.191176,0.343284,0.0895522,0.134328,0.179104,0.104478,0.238806,0.134328,0.179104,0.268657,0.0757576,0.242424,0.203125,0.171875,0.390625], + "N":[0.0103093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0], + "GC":[0.649485,0.268041,0.340206,0.402062,0.340206,0.43299,0.453608,0.350515,0.494845,0.340206,0.42268,0.463918,0.360825,0.494845,0.443299,0.350515,0.381443,0.494845,0.463918,0.402062,0.360825,0.443299,0.319588,0.329897,0.391753,0.340206,0.402062,0.360825,0.494845,0.329897,0.43299,0.402062,0.371134,0.381443,0.43299,0.402062,0.350515,0.505155,0.597938,0.371134,0.463918,0.443299,0.453608,0.505155,0.443299,0.43299,0.474227,0.42268,0.43299,0.298969,0.412371,0.443299,0.536082,0.443299,0.402062,0.350515,0.463918,0.546392,0.463918,0.453608,0.474227,0.381443,0.525773,0.463918,0.381443,0.391753,0.42268,0.42268,0.402062,0.340206,0.608247,0.546392,0.42268,0.463918,0.319588,0.546392,0.391753,0.56701,0.505155,0.474227,0.515464,0.536082,0.402062,0.618557,0.412371,0.628866,0.329897,0.546392,0.546392,0.474227,0.525773,0.453608,0.536082,0.412371,0.536082,0.402062,0.525773,0.546392,0.57732,0.412371,0.587629,0.505155,0.42268,0.505155,0.536082,0.56701,0.597938,0.546392,0.525773,0.597938,0.56701,0.443299,0.56701,0.680412,0.484536,0.639175,0.42268,0.505155,0.546392,0.525773,0.56701,0.494845,0.56701,0.659794,0.463918,0.443299,0.391753,0.649485,0.525773,0.42268,0.639175,0.505155,0.659794,0.494845,0.546392,0.484536,0.505155,0.587629,0.546392,0.520833,0.5,0.677083,0.510417,0.572917,0.510417,0.5625,0.541667,0.666667,0.489583,0.541667,0.635417,0.458333,0.552083,0.489583,0.46875,0.59375,0.536842,0.536842,0.578947,0.536842,0.684211,0.389474,0.547368,0.410526,0.526316,0.659574,0.526882,0.548387,0.419355,0.516129,0.602151,0.532609,0.521739,0.565217,0.543478,0.608696,0.532609,0.554348,0.413043,0.554348,0.554348,0.402174,0.413043,0.582418,0.688889,0.577778,0.544444,0.488889,0.566667,0.522222,0.47191,0.359551,0.5,0.574713,0.476744,0.517647,0.4,0.6,0.435294,0.488095,0.440476,0.402439,0.518519,0.555556,0.444444,0.432099,0.407407,0.666667,0.345679,0.62963,0.444444,0.469136,0.444444,0.506173,0.45,0.4375,0.4375,0.45,0.35443,0.461538,0.397436,0.346154,0.538462,0.448718,0.653846,0.447368,0.460526,0.368421,0.381579,0.44,0.6,0.287671,0.534247,0.486111,0.472222,0.408451,0.367647,0.58209,0.19403,0.373134,0.38806,0.38806,0.373134,0.373134,0.41791,0.522388,0.19697,0.393939,0.359375,0.453125,0.515625] + }, + "kmer_count": { + "AAAAA":0, "AAAAT":45, "AAAAC":39, "AAAAG":0, "AAATA":168, "AAATT":0, "AAATC":0, "AAATG":45, "AAACA":0, "AAACT":0, "AAACC":39, "AAACG":0, "AAAGA":41, "AAAGT":23, "AAAGC":2, "AAAGG":0, + "AATAA":84, "AATAT":48, "AATAC":45, "AATAG":125, "AATTA":43, "AATTT":0, "AATTC":0, "AATTG":3, "AATCA":40, "AATCT":0, "AATCC":0, "AATCG":0, "AATGA":0, "AATGT":0, "AATGC":94, "AATGG":1, + "AACAA":0, "AACAT":6, "AACAC":27, "AACAG":0, "AACTA":1, "AACTT":0, "AACTC":0, "AACTG":17, "AACCA":60, "AACCT":43, "AACCC":1, "AACCG":0, "AACGA":1, "AACGT":54, "AACGC":0, "AACGG":4, + "AAGAA":0, "AAGAT":0, "AAGAC":88, "AAGAG":0, "AAGTA":36, "AAGTT":1, "AAGTC":0, "AAGTG":23, "AAGCA":15, "AAGCT":1, "AAGCC":1, "AAGCG":0, "AAGGA":0, "AAGGT":0, "AAGGC":0, "AAGGG":28, + "ATAAA":75, "ATAAT":38, "ATAAC":8, "ATAAG":46, "ATATA":0, "ATATT":46, "ATATC":1, "ATATG":0, "ATACA":3, "ATACT":50, "ATACC":45, "ATACG":0, "ATAGA":42, "ATAGT":0, "ATAGC":94, "ATAGG":127, + "ATTAA":111, "ATTAT":45, "ATTAC":13, "ATTAG":0, "ATTTA":74, "ATTTT":52, "ATTTC":0, "ATTTG":53, "ATTCA":3, "ATTCT":1, "ATTCC":38, "ATTCG":0, "ATTGA":35, "ATTGT":3, "ATTGC":53, "ATTGG":0, + "ATCAA":41, "ATCAT":1, "ATCAC":154, "ATCAG":1, "ATCTA":0, "ATCTT":0, "ATCTC":0, "ATCTG":78, "ATCCA":39, "ATCCT":34, "ATCCC":1, "ATCCG":26, "ATCGA":1, "ATCGT":38, "ATCGC":70, "ATCGG":1, + "ATGAA":2, "ATGAT":0, "ATGAC":10, "ATGAG":39, "ATGTA":0, "ATGTT":28, "ATGTC":100, "ATGTG":2, "ATGCA":97, "ATGCT":50, "ATGCC":0, "ATGCG":0, "ATGGA":96, "ATGGT":0, "ATGGC":1, "ATGGG":1, + "ACAAA":0, "ACAAT":0, "ACAAC":0, "ACAAG":15, "ACATA":51, "ACATT":0, "ACATC":75, "ACATG":0, "ACACA":18, "ACACT":26, "ACACC":45, "ACACG":44, "ACAGA":45, "ACAGT":3, "ACAGC":0, "ACAGG":63, + "ACTAA":7, "ACTAT":1, "ACTAC":0, "ACTAG":0, "ACTTA":7, "ACTTT":22, "ACTTC":36, "ACTTG":11, "ACTCA":51, "ACTCT":0, "ACTCC":0, "ACTCG":0, "ACTGA":0, "ACTGT":18, "ACTGC":43, "ACTGG":0, + "ACCAA":45, "ACCAT":1, "ACCAC":52, "ACCAG":8, "ACCTA":67, "ACCTT":0, "ACCTC":1, "ACCTG":45, "ACCCA":2, "ACCCT":112, "ACCCC":45, "ACCCG":0, "ACCGA":0, "ACCGT":0, "ACCGC":0, "ACCGG":0, + "ACGAA":44, "ACGAT":50, "ACGAC":0, "ACGAG":1, "ACGTA":36, "ACGTT":63, "ACGTC":0, "ACGTG":19, "ACGCA":0, "ACGCT":53, "ACGCC":0, "ACGCG":52, "ACGGA":0, "ACGGT":1, "ACGGC":0, "ACGGG":53, + "AGAAA":0, "AGAAT":0, "AGAAC":1, "AGAAG":0, "AGATA":43, "AGATT":0, "AGATC":0, "AGATG":9, "AGACA":89, "AGACT":0, "AGACC":43, "AGACG":96, "AGAGA":1, "AGAGT":0, "AGAGC":44, "AGAGG":1, + "AGTAA":28, "AGTAT":75, "AGTAC":0, "AGTAG":10, "AGTTA":2, "AGTTT":0, "AGTTC":3, "AGTTG":1, "AGTCA":0, "AGTCT":0, "AGTCC":0, "AGTCG":0, "AGTGA":14, "AGTGT":8, "AGTGC":0, "AGTGG":43, + "AGCAA":1, "AGCAT":67, "AGCAC":49, "AGCAG":0, "AGCTA":13, "AGCTT":0, "AGCTC":97, "AGCTG":0, "AGCCA":0, "AGCCT":1, "AGCCC":42, "AGCCG":53, "AGCGA":0, "AGCGT":45, "AGCGC":0, "AGCGG":0, + "AGGAA":49, "AGGAT":38, "AGGAC":2, "AGGAG":1, "AGGTA":1, "AGGTT":19, "AGGTC":53, "AGGTG":36, "AGGCA":39, "AGGCT":0, "AGGCC":0, "AGGCG":9, "AGGGA":0, "AGGGT":116, "AGGGC":0, "AGGGG":37, + "TAAAA":39, "TAAAT":123, "TAAAC":0, "TAAAG":22, "TAATA":119, "TAATT":42, "TAATC":0, "TAATG":4, "TAACA":26, "TAACT":1, "TAACC":53, "TAACG":0, "TAAGA":46, "TAAGT":28, "TAAGC":0, "TAAGG":30, + "TATAA":0, "TATAT":0, "TATAC":0, "TATAG":0, "TATTA":110, "TATTT":131, "TATTC":0, "TATTG":35, "TATCA":53, "TATCT":50, "TATCC":24, "TATCG":70, "TATGA":11, "TATGT":85, "TATGC":0, "TATGG":0, + "TACAA":15, "TACAT":0, "TACAC":0, "TACAG":16, "TACTA":7, "TACTT":43, "TACTC":0, "TACTG":43, "TACCA":45, "TACCT":1, "TACCC":0, "TACCG":0, "TACGA":0, "TACGT":19, "TACGC":0, "TACGG":0, + "TAGAA":1, "TAGAT":0, "TAGAC":42, "TAGAG":0, "TAGTA":27, "TAGTT":2, "TAGTC":0, "TAGTG":0, "TAGCA":52, "TAGCT":12, "TAGCC":42, "TAGCG":0, "TAGGA":50, "TAGGT":56, "TAGGC":0, "TAGGG":90, + "TTAAA":46, "TTAAT":90, "TTAAC":71, "TTAAG":30, "TTATA":0, "TTATT":75, "TTATC":28, "TTATG":20, "TTACA":13, "TTACT":7, "TTACC":0, "TTACG":0, "TTAGA":1, "TTAGT":28, "TTAGC":1, "TTAGG":20, + "TTTAA":30, "TTTAT":41, "TTTAC":0, "TTTAG":44, "TTTTA":13, "TTTTT":6, "TTTTC":52, "TTTTG":1, "TTTCA":0, "TTTCT":0, "TTTCC":0, "TTTCG":52, "TTTGA":45, "TTTGT":0, "TTTGC":0, "TTTGG":53, + "TTCAA":19, "TTCAT":0, "TTCAC":3, "TTCAG":37, "TTCTA":0, "TTCTT":0, "TTCTC":0, "TTCTG":0, "TTCCA":0, "TTCCT":71, "TTCCC":44, "TTCCG":0, "TTCGA":0, "TTCGT":52, "TTCGC":29, "TTCGG":0, + "TTGAA":35, "TTGAT":44, "TTGAC":2, "TTGAG":1, "TTGTA":4, "TTGTT":3, "TTGTC":0, "TTGTG":0, "TTGCA":0, "TTGCT":0, "TTGCC":0, "TTGCG":53, "TTGGA":1, "TTGGT":52, "TTGGC":0, "TTGGG":13, + "TCAAA":41, "TCAAT":17, "TCAAC":0, "TCAAG":0, "TCATA":39, "TCATT":0, "TCATC":34, "TCATG":1, "TCACA":53, "TCACT":2, "TCACC":52, "TCACG":101, "TCAGA":1, "TCAGT":0, "TCAGC":0, "TCAGG":38, + "TCTAA":0, "TCTAT":52, "TCTAC":0, "TCTAG":0, "TCTTA":33, "TCTTT":47, "TCTTC":0, "TCTTG":1, "TCTCA":0, "TCTCT":0, "TCTCC":52, "TCTCG":45, "TCTGA":0, "TCTGT":49, "TCTGC":0, "TCTGG":81, + "TCCAA":0, "TCCAT":91, "TCCAC":0, "TCCAG":45, "TCCTA":79, "TCCTT":1, "TCCTC":0, "TCCTG":37, "TCCCA":1, "TCCCT":0, "TCCCC":44, "TCCCG":45, "TCCGA":26, "TCCGT":0, "TCCGC":0, "TCCGG":48, + "TCGAA":0, "TCGAT":0, "TCGAC":1, "TCGAG":0, "TCGTA":0, "TCGTT":0, "TCGTC":52, "TCGTG":38, "TCGCA":120, "TCGCT":1, "TCGCC":29, "TCGCG":45, "TCGGA":7, "TCGGT":0, "TCGGC":0, "TCGGG":1, + "TGAAA":0, "TGAAT":2, "TGAAC":50, "TGAAG":10, "TGATA":33, "TGATT":40, "TGATC":45, "TGATG":35, "TGACA":1, "TGACT":1, "TGACC":10, "TGACG":1, "TGAGA":1, "TGAGT":40, "TGAGC":1, "TGAGG":41, + "TGTAA":32, "TGTAT":16, "TGTAC":0, "TGTAG":4, "TGTTA":10, "TGTTT":0, "TGTTC":29, "TGTTG":0, "TGTCA":0, "TGTCT":81, "TGTCC":10, "TGTCG":56, "TGTGA":45, "TGTGT":7, "TGTGC":51, "TGTGG":20, + "TGCAA":0, "TGCAT":97, "TGCAC":94, "TGCAG":0, "TGCTA":45, "TGCTT":4, "TGCTC":45, "TGCTG":1, "TGCCA":0, "TGCCT":34, "TGCCC":2, "TGCCG":0, "TGCGA":132, "TGCGT":1, "TGCGC":1, "TGCGG":0, + "TGGAA":1, "TGGAT":52, "TGGAC":2, "TGGAG":95, "TGGTA":52, "TGGTT":70, "TGGTC":0, "TGGTG":0, "TGGCA":1, "TGGCT":1, "TGGCC":0, "TGGCG":0, "TGGGA":1, "TGGGT":3, "TGGGC":21, "TGGGG":63, + "CAAAA":0, "CAAAT":45, "CAAAC":0, "CAAAG":41, "CAATA":14, "CAATT":3, "CAATC":0, "CAATG":45, "CAACA":0, "CAACT":0, "CAACC":1, "CAACG":0, "CAAGA":0, "CAAGT":0, "CAAGC":15, "CAAGG":0, + "CATAA":48, "CATAT":0, "CATAC":7, "CATAG":44, "CATTA":16, "CATTT":52, "CATTC":2, "CATTG":52, "CATCA":50, "CATCT":29, "CATCC":34, "CATCG":39, "CATGA":0, "CATGT":1, "CATGC":52, "CATGG":45, + "CACAA":0, "CACAT":0, "CACAC":105, "CACAG":53, "CACTA":0, "CACTT":31, "CACTC":51, "CACTG":0, "CACCA":0, "CACCT":25, "CACCC":149, "CACCG":0, "CACGA":50, "CACGT":45, "CACGC":52, "CACGG":51, + "CAGAA":0, "CAGAT":52, "CAGAC":45, "CAGAG":1, "CAGTA":49, "CAGTT":3, "CAGTC":0, "CAGTG":0, "CAGCA":0, "CAGCT":0, "CAGCC":1, "CAGCG":45, "CAGGA":41, "CAGGT":52, "CAGGC":9, "CAGGG":38, + "CTAAA":63, "CTAAT":0, "CTAAC":0, "CTAAG":0, "CTATA":0, "CTATT":105, "CTATC":96, "CTATG":51, "CTACA":15, "CTACT":36, "CTACC":1, "CTACG":24, "CTAGA":0, "CTAGT":1, "CTAGC":0, "CTAGG":1, + "CTTAA":46, "CTTAT":33, "CTTAC":7, "CTTAG":1, "CTTTA":28, "CTTTT":0, "CTTTC":0, "CTTTG":44, "CTTCA":37, "CTTCT":0, "CTTCC":0, "CTTCG":0, "CTTGA":1, "CTTGT":5, "CTTGC":0, "CTTGG":12, + "CTCAA":0, "CTCAT":34, "CTCAC":51, "CTCAG":1, "CTCTA":0, "CTCTT":2, "CTCTC":52, "CTCTG":0, "CTCCA":97, "CTCCT":0, "CTCCC":45, "CTCCG":48, "CTCGA":0, "CTCGT":0, "CTCGC":46, "CTCGG":0, + "CTGAA":10, "CTGAT":0, "CTGAC":0, "CTGAG":0, "CTGTA":48, "CTGTT":0, "CTGTC":49, "CTGTG":45, "CTGCA":0, "CTGCT":1, "CTGCC":36, "CTGCG":44, "CTGGA":51, "CTGGT":29, "CTGGC":0, "CTGGG":52, + "CCAAA":45, "CCAAT":0, "CCAAC":0, "CCAAG":0, "CCATA":7, "CCATT":0, "CCATC":39, "CCATG":52, "CCACA":44, "CCACT":51, "CCACC":1, "CCACG":2, "CCAGA":52, "CCAGT":0, "CCAGC":46, "CCAGG":0, + "CCTAA":42, "CCTAT":136, "CCTAC":71, "CCTAG":1, "CCTTA":46, "CCTTT":0, "CCTTC":0, "CCTTG":1, "CCTCA":35, "CCTCT":0, "CCTCC":0, "CCTCG":1, "CCTGA":10, "CCTGT":74, "CCTGC":37, "CCTGG":0, + "CCCAA":0, "CCCAT":6, "CCCAC":46, "CCCAG":45, "CCCTA":103, "CCCTT":46, "CCCTC":0, "CCCTG":9, "CCCCA":45, "CCCCT":45, "CCCCC":90, "CCCCG":0, "CCCGA":0, "CCCGT":43, "CCCGC":1, "CCCGG":1, + "CCGAA":1, "CCGAT":0, "CCGAC":26, "CCGAG":0, "CCGTA":0, "CCGTT":0, "CCGTC":0, "CCGTG":43, "CCGCA":0, "CCGCT":0, "CCGCC":0, "CCGCG":1, "CCGGA":51, "CCGGT":1, "CCGGC":45, "CCGGG":4, + "CGAAA":45, "CGAAT":0, "CGAAC":6, "CGAAG":0, "CGATA":87, "CGATT":0, "CGATC":0, "CGATG":51, "CGACA":72, "CGACT":0, "CGACC":2, "CGACG":0, "CGAGA":52, "CGAGT":1, "CGAGC":0, "CGAGG":0, + "CGTAA":0, "CGTAT":0, "CGTAC":0, "CGTAG":36, "CGTTA":1, "CGTTT":0, "CGTTC":60, "CGTTG":0, "CGTCA":0, "CGTCT":97, "CGTCC":0, "CGTCG":0, "CGTGA":80, "CGTGT":18, "CGTGC":43, "CGTGG":2, + "CGCAA":45, "CGCAT":0, "CGCAC":27, "CGCAG":49, "CGCTA":0, "CGCTT":1, "CGCTC":1, "CGCTG":52, "CGCCA":0, "CGCCT":29, "CGCCC":0, "CGCCG":0, "CGCGA":53, "CGCGT":43, "CGCGC":0, "CGCGG":2, + "CGGAA":1, "CGGAT":7, "CGGAC":0, "CGGAG":50, "CGGTA":1, "CGGTT":1, "CGGTC":0, "CGGTG":1, "CGGCA":0, "CGGCT":45, "CGGCC":0, "CGGCG":0, "CGGGA":53, "CGGGT":2, "CGGGC":4, "CGGGG":0, + "GAAAA":45, "GAAAT":0, "GAAAC":0, "GAAAG":2, "GAATA":1, "GAATT":0, "GAATC":40, "GAATG":1, "GAACA":7, "GAACT":16, "GAACC":9, "GAACG":59, "GAAGA":0, "GAAGT":9, "GAAGC":0, "GAAGG":0, + "GATAA":35, "GATAT":1, "GATAC":49, "GATAG":94, "GATTA":0, "GATTT":0, "GATTC":39, "GATTG":0, "GATCA":52, "GATCT":0, "GATCC":41, "GATCG":1, "GATGA":40, "GATGT":42, "GATGC":1, "GATGG":51, + "GACAA":0, "GACAT":119, "GACAC":1, "GACAG":45, "GACTA":0, "GACTT":1, "GACTC":0, "GACTG":1, "GACCA":1, "GACCT":44, "GACCC":10, "GACCG":0, "GACGA":44, "GACGT":0, "GACGC":53, "GACGG":0, + "GAGAA":0, "GAGAT":0, "GAGAC":53, "GAGAG":45, "GAGTA":1, "GAGTT":0, "GAGTC":0, "GAGTG":42, "GAGCA":50, "GAGCT":96, "GAGCC":52, "GAGCG":0, "GAGGA":0, "GAGGT":1, "GAGGC":39, "GAGGG":1, + "GTAAA":0, "GTAAT":36, "GTAAC":1, "GTAAG":28, "GTATA":0, "GTATT":52, "GTATC":72, "GTATG":27, "GTACA":0, "GTACT":0, "GTACC":0, "GTACG":0, "GTAGA":0, "GTAGT":0, "GTAGC":12, "GTAGG":48, + "GTTAA":51, "GTTAT":3, "GTTAC":0, "GTTAG":2, "GTTTA":1, "GTTTT":18, "GTTTC":0, "GTTTG":0, "GTTCA":19, "GTTCT":0, "GTTCC":78, "GTTCG":29, "GTTGA":1, "GTTGT":0, "GTTGC":0, "GTTGG":1, + "GTCAA":0, "GTCAT":39, "GTCAC":0, "GTCAG":0, "GTCTA":52, "GTCTT":80, "GTCTC":45, "GTCTG":52, "GTCCA":0, "GTCCT":11, "GTCCC":0, "GTCCG":0, "GTCGA":0, "GTCGT":0, "GTCGC":50, "GTCGG":7, + "GTGAA":15, "GTGAT":113, "GTGAC":1, "GTGAG":43, "GTGTA":0, "GTGTT":8, "GTGTC":0, "GTGTG":77, "GTGCA":94, "GTGCT":44, "GTGCC":0, "GTGCG":37, "GTGGA":2, "GTGGT":41, "GTGGC":1, "GTGGG":22, + "GCAAA":0, "GCAAT":45, "GCAAC":1, "GCAAG":0, "GCATA":0, "GCATT":120, "GCATC":0, "GCATG":45, "GCACA":43, "GCACT":0, "GCACC":77, "GCACG":51, "GCAGA":0, "GCAGT":49, "GCAGC":0, "GCAGG":40, + "GCTAA":14, "GCTAT":63, "GCTAC":0, "GCTAG":1, "GCTTA":1, "GCTTT":0, "GCTTC":0, "GCTTG":5, "GCTCA":0, "GCTCT":54, "GCTCC":138, "GCTCG":0, "GCTGA":1, "GCTGT":0, "GCTGC":1, "GCTGG":51, + "GCCAA":0, "GCCAT":0, "GCCAC":0, "GCCAG":0, "GCCTA":1, "GCCTT":0, "GCCTC":34, "GCCTG":29, "GCCCA":50, "GCCCT":0, "GCCCC":0, "GCCCG":0, "GCCGA":1, "GCCGT":0, "GCCGC":0, "GCCGG":52, + "GCGAA":6, "GCGAT":88, "GCGAC":45, "GCGAG":53, "GCGTA":0, "GCGTT":0, "GCGTC":45, "GCGTG":44, "GCGCA":1, "GCGCT":0, "GCGCC":0, "GCGCG":0, "GCGGA":0, "GCGGT":1, "GCGGC":0, "GCGGG":1, + "GGAAA":2, "GGAAT":39, "GGAAC":34, "GGAAG":0, "GGATA":16, "GGATT":0, "GGATC":52, "GGATG":40, "GGACA":2, "GGACT":1, "GGACC":0, "GGACG":0, "GGAGA":44, "GGAGT":2, "GGAGC":153, "GGAGG":0, + "GGTAA":3, "GGTAT":53, "GGTAC":0, "GGTAG":11, "GGTTA":43, "GGTTT":20, "GGTTC":33, "GGTTG":1, "GGTCA":38, "GGTCT":52, "GGTCC":0, "GGTCG":1, "GGTGA":33, "GGTGT":53, "GGTGC":80, "GGTGG":2, + "GGCAA":0, "GGCAT":0, "GGCAC":1, "GGCAG":40, "GGCTA":19, "GGCTT":1, "GGCTC":48, "GGCTG":0, "GGCCA":0, "GGCCT":0, "GGCCC":4, "GGCCG":0, "GGCGA":7, "GGCGT":0, "GGCGC":0, "GGCGG":0, + "GGGAA":24, "GGGAT":12, "GGGAC":0, "GGGAG":53, "GGGTA":13, "GGGTT":3, "GGGTC":38, "GGGTG":131, "GGGCA":1, "GGGCT":22, "GGGCC":3, "GGGCG":0, "GGGGA":35, "GGGGT":64, "GGGGC":2, "GGGGG":126 + }, + "overrepresented_sequences": { + } + }, + "command": "fastp --thread 1 --report_title fastp report for bwa-mem-fastq1_fq.fastq -i bwa-mem-fastq1_fq.fastq -o first.fastq -I bwa-mem-fastq2_fq.fastq -O second.fastq " +} \ No newline at end of file
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/fastp_stats.tabular Wed Aug 08 08:49:39 2018 -0400 @@ -0,0 +1,3 @@ +Sample command +R1_fq fastp --thread 1 --report_title fastp report for R1_fq.fastq -i R1_fq.fastq -o first.fastq -U --umi_loc read1 --umi_len 8 +bwa-mem-fastq1_fq fastp --thread 1 --report_title fastp report for bwa-mem-fastq1_fq.fastq -i bwa-mem-fastq1_fq.fastq -o first.fastq -I bwa-mem-fastq2_fq.fastq -O second.fastq
--- a/test-data/post_aligner_soft_stats.tabular Mon Aug 06 10:42:11 2018 -0400 +++ b/test-data/post_aligner_soft_stats.tabular Wed Aug 08 08:49:39 2018 -0400 @@ -1,22 +1,22 @@ -Sample QUAST_mqc-generalstats-N50 QUAST_mqc-generalstats-Total_length featureCounts_mqc-generalstats-percent_assigned featureCounts_mqc-generalstats-Assigned Picard_mqc-generalstats-PCT_PF_READS_ALIGNED Prokka_mqc-generalstats-contigs Prokka_mqc-generalstats-organism Prokka_mqc-generalstats-bases Prokka_mqc-generalstats-CDS Bcftools Stats_mqc-generalstats-tstv Bcftools Stats_mqc-generalstats-number_of_MNPs Bcftools Stats_mqc-generalstats-number_of_indels Bcftools Stats_mqc-generalstats-number_of_SNPs Bcftools Stats_mqc-generalstats-number_of_records Bamtools_mqc-generalstats-duplicates_pct Bamtools_mqc-generalstats-mapped_reads_pct Picard_mqc-generalstats-PERCENT_DUPLICATION Picard_mqc-generalstats-summed_median Picard_mqc-generalstats-summed_mean GATK VariantEval_mqc-generalstats-known_titv GATK VariantEval_mqc-generalstats-novel_titv HTSeq Count_mqc-generalstats-percent_assigned HTSeq Count_mqc-generalstats-assigned Picard_mqc-generalstats-PCT_MRNA_BASES Picard_mqc-generalstats-PCT_RIBOSOMAL_BASES Samtools Flagstat_mqc-generalstats-mapped_passed Samtools Stats_mqc-generalstats-raw_total_sequences Samtools Stats_mqc-generalstats-non_primary_alignments Samtools Stats_mqc-generalstats-reads_mapped Samtools Stats_mqc-generalstats-error_rate Samtools Stats_mqc-generalstats-reads_mapped_percent SnpEff_mqc-generalstats-Ts_Tv_ratio SnpEff_mqc-generalstats-Number_of_variants_before_filter SnpEff_mqc-generalstats-Change_rate Samblaster_mqc-generalstats-pct_dups -14892_1#15 115136.0 18435361.0 -70: TopHat on data 1, data 4, and data 3: accepted_hits 70.82267755353567 321797 -75: TopHat on data 1, data 6, and data 5: accepted_hits 69.58585803304067 445012 -80: TopHat on data 1, data 8, and data 7: accepted_hits 71.76957768385707 394981 -85: TopHat on data 1, data 10, and data 9: accepted_hits 72.02454351337069 437485 -90: TopHat on data 1, data 12, and data 11: accepted_hits 71.33130826437625 388170 -95: TopHat on data 1, data 14, and data 13: accepted_hits 70.72517103678439 453929 -D11_H4K16ac_Rep1_R1_fastq_gz 0.983085 -Sample1 30 Helicobacter pylori 1629978 1548 -Sample2 52 Escherichia coli 162997532523 1548 -Test1 1.97 72330.0 902934.0 4474244.0 5522770.0 -bamtools 0.0 93.125 -dataset_114 0.005582 -dataset_197 176 271.809759 -gatk_varianteval 0.0 2.2 -htseq 0.0 0 -picard_CollectRnaSeqMetrics_bam 79.62310000000001 -samtools_flagstat 20689039 -samtools_stats 641821.0 12111.0 641821.0 0.004248509 100.0 -snpeff 0.0 972155.0 3190.0 -virtual-normal 1.28 +Sample QUAST_mqc-generalstats-quast-N50 QUAST_mqc-generalstats-quast-Total_length featureCounts_mqc-generalstats-featurecounts-percent_assigned featureCounts_mqc-generalstats-featurecounts-Assigned Picard_mqc-generalstats-picard-PCT_PF_READS_ALIGNED Prokka_mqc-generalstats-prokka-organism Prokka_mqc-generalstats-prokka-contigs Prokka_mqc-generalstats-prokka-bases Prokka_mqc-generalstats-prokka-CDS Bcftools Stats_mqc-generalstats-bcftools_stats-number_of_records Bcftools Stats_mqc-generalstats-bcftools_stats-number_of_SNPs Bcftools Stats_mqc-generalstats-bcftools_stats-number_of_indels Bcftools Stats_mqc-generalstats-bcftools_stats-tstv Bcftools Stats_mqc-generalstats-bcftools_stats-number_of_MNPs Bamtools_mqc-generalstats-bamtools-duplicates_pct Bamtools_mqc-generalstats-bamtools-mapped_reads_pct Picard_mqc-generalstats-picard-PERCENT_DUPLICATION Picard_mqc-generalstats-picard-summed_median Picard_mqc-generalstats-picard-summed_mean GATK VariantEval_mqc-generalstats-gatk_varianteval-known_titv GATK VariantEval_mqc-generalstats-gatk_varianteval-novel_titv HTSeq Count_mqc-generalstats-htseq_count-percent_assigned HTSeq Count_mqc-generalstats-htseq_count-assigned Picard_mqc-generalstats-picard-PCT_RIBOSOMAL_BASES Picard_mqc-generalstats-picard-PCT_MRNA_BASES Samtools Flagstat_mqc-generalstats-samtools_flagstat-mapped_passed Samtools Stats_mqc-generalstats-samtools_stats-error_rate Samtools Stats_mqc-generalstats-samtools_stats-non_primary_alignments Samtools Stats_mqc-generalstats-samtools_stats-reads_mapped Samtools Stats_mqc-generalstats-samtools_stats-reads_mapped_percent Samtools Stats_mqc-generalstats-samtools_stats-reads_properly_paired_percent Samtools Stats_mqc-generalstats-samtools_stats-reads_MQ0_percent Samtools Stats_mqc-generalstats-samtools_stats-raw_total_sequences SnpEff_mqc-generalstats-snpeff-Change_rate SnpEff_mqc-generalstats-snpeff-Ts_Tv_ratio SnpEff_mqc-generalstats-snpeff-Number_of_variants_before_filter Samblaster_mqc-generalstats-samblaster-pct_dups +14892_1#15 115136.0 18435361.0 +70: TopHat on data 1, data 4, and data 3: accepted_hits 70.82267755353567 321797 +75: TopHat on data 1, data 6, and data 5: accepted_hits 69.58585803304067 445012 +80: TopHat on data 1, data 8, and data 7: accepted_hits 71.76957768385707 394981 +85: TopHat on data 1, data 10, and data 9: accepted_hits 72.02454351337069 437485 +90: TopHat on data 1, data 12, and data 11: accepted_hits 71.33130826437625 388170 +95: TopHat on data 1, data 14, and data 13: accepted_hits 70.72517103678439 453929 +D11_H4K16ac_Rep1_R1_fastq_gz 0.983085 +Sample1 Helicobacter pylori 30 1629978 1548 +Sample2 Escherichia coli 52 162997532523 1548 +Test1 5522770.0 4474244.0 902934.0 1.97 72330.0 +bamtools_txt 0.0 93.125 +dataset_114 0.005582 +dataset_197 176 271.809759 +gatk_varianteval_txt 0.0 2.2 +htseq_txt 0.0 0 +picard_CollectRnaSeqMetrics_bam 79.62310000000001 +samtools_flagstat_txt 20689039 +samtools_stats_txt 0.004248509 12111.0 641821.0 100.0 99.03477760933345 0.010906467691147531 641821.0 +snpeff_csv 3190.0 0.0 972155.0 +virtual-normal 1.28
--- a/test-data/pre_alignment_soft_stats.tabular Mon Aug 06 10:42:11 2018 -0400 +++ b/test-data/pre_alignment_soft_stats.tabular Wed Aug 08 08:49:39 2018 -0400 @@ -1,7 +1,9 @@ -Sample SortMeRNA_mqc-generalstats-rRNA_pct Trimmomatic_mqc-generalstats-dropped_pct Cutadapt_mqc-generalstats-percent_trimmed FastQC_mqc-generalstats-avg_sequence_length FastQC_mqc-generalstats-percent_fails FastQC_mqc-generalstats-percent_duplicates FastQC_mqc-generalstats-percent_gc FastQC_mqc-generalstats-total_sequences Flexbar_mqc-generalstats-removed_bases_pct -25839_merged 1.099299750020029 -C2 17.98 -dataset_33 10.776820436239396 -poulet5_1 101.0 8.333333333333332 36.30591159931017 48.0 267849.0 -poulet5_2 101.0 8.333333333333332 36.173388748054116 48.0 267849.0 -result_right 45.26066350710901 +Sample SortMeRNA_mqc-generalstats-sortmerna-rRNA_pct Trimmomatic_mqc-generalstats-trimmomatic-dropped_pct fastp_mqc-generalstats-fastp-pct_duplication fastp_mqc-generalstats-fastp-after_filtering_q30_rate fastp_mqc-generalstats-fastp-after_filtering_q30_bases fastp_mqc-generalstats-fastp-after_filtering_gc_content fastp_mqc-generalstats-fastp-pct_surviving fastp_mqc-generalstats-fastp-pct_adapter Cutadapt_mqc-generalstats-cutadapt-percent_trimmed FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences Flexbar_mqc-generalstats-flexbar-removed_bases_pct +25839_merged 1.099299750020029 +C2 17.98 +R1_fq 0.0 0.79021 226.0 0.367133 100.0 +bwa-mem-fastq1_fq 0.0 0.907789 41653.0 0.479928 97.97979797979798 33.33333333333333 +dataset_33 10.776820436239396 +poulet5_1 36.30591159931017 48.0 101.0 8.333333333333332 267849.0 +poulet5_2 36.173388748054116 48.0 101.0 8.333333333333332 267849.0 +result_right 45.26066350710901