Mercurial > repos > iuc > nanoplot

annotate test-data/NanoStats.txt @ 7:7b379e98b9a9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 15a00502ecd67b4908f392660c12988f972b6eab
author iuc
date Thu, 07 Mar 2024 08:46:06 +0000
parents a3c4fe6f49ab
children a38bdcec9e4c
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a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
1 Metrics dataset
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
2 number_of_reads 371
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
3 number_of_bases 8611871.0
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
4 median_read_length 9390.0
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
5 mean_read_length 23212.6
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
6 read_length_stdev 42729.8
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
7 n50 60395.0
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
8 active_channels 169
7
7b379e98b9a9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 15a00502ecd67b4908f392660c12988f972b6eab
iuc
parents: 5
diff changeset
9 mean_qual 9.3
5
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
10 median_qual 10.3
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
11 longest_read_(with_Q):1 393431 (10.6)
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
12 longest_read_(with_Q):2 341725 (11.8)
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
13 longest_read_(with_Q):3 320662 (8.0)
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
14 longest_read_(with_Q):4 226843 (9.1)
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
15 longest_read_(with_Q):5 221901 (10.0)
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
16 highest_Q_read_(with_length):1 13.3 (6333)
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
17 highest_Q_read_(with_length):2 13.1 (5448)
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
18 highest_Q_read_(with_length):3 12.9 (27834)
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
19 highest_Q_read_(with_length):4 12.8 (20351)
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
20 highest_Q_read_(with_length):5 12.8 (97730)
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
21 Reads >Q5: 371 (100.0%) 8.6Mb
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
22 Reads >Q7: 371 (100.0%) 8.6Mb
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
23 Reads >Q10: 207 (55.8%) 4.7Mb
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
24 Reads >Q12: 49 (13.2%) 0.9Mb
a3c4fe6f49ab planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents: 2
diff changeset
25 Reads >Q15: 0 (0.0%) 0.0Mb