Mercurial > repos > iuc > nanoplot
annotate test-data/NanoStats.txt @ 8:a02b8b3f5a0c draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit af418b2445709e63d3ed744f93fe74559e4fbaff
author | iuc |
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date | Wed, 10 Apr 2024 14:30:37 +0000 |
parents | 7b379e98b9a9 |
children | a38bdcec9e4c |
rev | line source |
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5
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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1 Metrics dataset |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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2 number_of_reads 371 |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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3 number_of_bases 8611871.0 |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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4 median_read_length 9390.0 |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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5 mean_read_length 23212.6 |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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6 read_length_stdev 42729.8 |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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7 n50 60395.0 |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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8 active_channels 169 |
7
7b379e98b9a9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 15a00502ecd67b4908f392660c12988f972b6eab
iuc
parents:
5
diff
changeset
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9 mean_qual 9.3 |
5
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
|
10 median_qual 10.3 |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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11 longest_read_(with_Q):1 393431 (10.6) |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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12 longest_read_(with_Q):2 341725 (11.8) |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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13 longest_read_(with_Q):3 320662 (8.0) |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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14 longest_read_(with_Q):4 226843 (9.1) |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
|
15 longest_read_(with_Q):5 221901 (10.0) |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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16 highest_Q_read_(with_length):1 13.3 (6333) |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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17 highest_Q_read_(with_length):2 13.1 (5448) |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
|
18 highest_Q_read_(with_length):3 12.9 (27834) |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
|
19 highest_Q_read_(with_length):4 12.8 (20351) |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
|
20 highest_Q_read_(with_length):5 12.8 (97730) |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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21 Reads >Q5: 371 (100.0%) 8.6Mb |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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22 Reads >Q7: 371 (100.0%) 8.6Mb |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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23 Reads >Q10: 207 (55.8%) 4.7Mb |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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24 Reads >Q12: 49 (13.2%) 0.9Mb |
a3c4fe6f49ab
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 52e462654477b6acf9a087063d3ddb19f66f8b38
iuc
parents:
2
diff
changeset
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25 Reads >Q15: 0 (0.0%) 0.0Mb |