Mercurial > repos > iuc > ncbi_eutils_epost
diff epost.xml @ 0:18e6b25259ff draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit 15bcc5104c577b4b9c761f2854fc686c07ffa9db
author | iuc |
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date | Thu, 07 Jul 2016 02:40:33 -0400 |
parents | |
children | 7d868844e952 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/epost.xml Thu Jul 07 02:40:33 2016 -0400 @@ -0,0 +1,45 @@ +<?xml version="1.0"?> +<tool id="ncbi_eutils_epost" name="NCBI EPost" version="@WRAPPER_VERSION@"> + <description>post UIDs to NCBI History Server</description> + <macros> + <import>macros.xml</import> + </macros> + <expand macro="requirements"/> + <version_command>python epost.py --version</version_command> + <command detect_errors="aggressive" interpreter="python"><![CDATA[epost.py +$db_select + +@EMAIL_ARGUMENTS@ + +@LIST_OR_HIST@ + +> $history +]]></command> + <inputs> + <expand macro="dbselect"/> + <expand macro="list_or_hist"/> + </inputs> + <outputs> + <expand macro="history_out"/> + </outputs> + <tests> + <test> + <param name="db_select" value="nuccore"/> + <param name="qss" value="id_list"/> + <param name="id_list" value="126697566"/> + <output name="history" file="example.history.json" compare="sim_size" delta="10" ftype="json"/> + </test> + </tests> + <help><![CDATA[ +NCBI Entrez EPost +================= + +Accepts a list of UIDs from a given database, stores the set on the History +Server, and responds with an NCBI History reference. + +@REFERENCES@ + +@DISCLAIMER@ + ]]></help> + <expand macro="citations"/> +</tool>