Mercurial > repos > iuc > orthofinder_onlygroups
comparison test-data/results_fromblast/Statistics_PerSpecies.tsv @ 5:974d8c28e586 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/orthofinder commit 8fb4e5b2821a83fda89ac616b32726714962717c"
| author | iuc |
|---|---|
| date | Mon, 17 Aug 2020 12:59:19 -0400 |
| parents | |
| children |
comparison
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| 4:999060f051ac | 5:974d8c28e586 |
|---|---|
| 1 Mycoplasma_agalactiae Mycoplasma_gallisepticum Mycoplasma_genitalium Mycoplasma_hyopneumoniae | |
| 2 Number of genes 820 763 476 674 | |
| 3 Number of genes in orthogroups 659 619 436 562 | |
| 4 Number of unassigned genes 161 144 40 112 | |
| 5 Percentage of genes in orthogroups 80.4 81.1 91.6 83.4 | |
| 6 Percentage of unassigned genes 19.6 18.9 8.4 16.6 | |
| 7 Number of orthogroups containing species 466 470 394 449 | |
| 8 Percentage of orthogroups containing species 74.9 75.6 63.3 72.2 | |
| 9 Number of species-specific orthogroups 42 15 4 35 | |
| 10 Number of genes in species-specific orthogroups 189 116 9 112 | |
| 11 Percentage of genes in species-specific orthogroups 23.0 15.2 1.9 16.6 | |
| 12 | |
| 13 | |
| 14 Number of genes per-species in orthogroup Number of orthogroups Number of orthogroups Number of orthogroups Number of orthogroups | |
| 15 '0 156 152 228 173 | |
| 16 '1 392 423 367 398 | |
| 17 '2 35 34 20 27 | |
| 18 '3 25 4 5 10 | |
| 19 '4 5 2 1 6 | |
| 20 '5 3 0 0 2 | |
| 21 '6 2 1 0 2 | |
| 22 '7 0 2 0 2 | |
| 23 '8 0 1 0 1 | |
| 24 '9 0 1 0 0 | |
| 25 '10 1 0 1 0 | |
| 26 11-15 2 1 0 1 | |
| 27 16-20 0 0 0 0 | |
| 28 21-50 1 0 0 0 | |
| 29 51-100 0 1 0 0 | |
| 30 101-150 0 0 0 0 | |
| 31 151-200 0 0 0 0 | |
| 32 201-500 0 0 0 0 | |
| 33 501-1000 0 0 0 0 | |
| 34 '1001+ 0 0 0 0 | |
| 35 | |
| 36 Number of genes per-species in orthogroup Percentage of orthogroups Percentage of orthogroups Percentage of orthogroups Percentage of orthogroups | |
| 37 '0 25.1 24.4 36.7 27.8 | |
| 38 '1 63.0 68.0 59.0 64.0 | |
| 39 '2 5.6 5.5 3.2 4.3 | |
| 40 '3 4.0 0.6 0.8 1.6 | |
| 41 '4 0.8 0.3 0.2 1.0 | |
| 42 '5 0.5 0.0 0.0 0.3 | |
| 43 '6 0.3 0.2 0.0 0.3 | |
| 44 '7 0.0 0.3 0.0 0.3 | |
| 45 '8 0.0 0.2 0.0 0.2 | |
| 46 '9 0.0 0.2 0.0 0.0 | |
| 47 '10 0.2 0.0 0.2 0.0 | |
| 48 11-15 0.3 0.2 0.0 0.2 | |
| 49 16-20 0.0 0.0 0.0 0.0 | |
| 50 21-50 0.2 0.0 0.0 0.0 | |
| 51 51-100 0.0 0.2 0.0 0.0 | |
| 52 101-150 0.0 0.0 0.0 0.0 | |
| 53 151-200 0.0 0.0 0.0 0.0 | |
| 54 201-500 0.0 0.0 0.0 0.0 | |
| 55 501-1000 0.0 0.0 0.0 0.0 | |
| 56 '1001+ 0.0 0.0 0.0 0.0 | |
| 57 | |
| 58 Number of genes per-species in orthogroup Number of genes Number of genes Number of genes Number of genes | |
| 59 '0 0 0 0 0 | |
| 60 '1 392 423 367 398 | |
| 61 '2 70 68 40 54 | |
| 62 '3 75 12 15 30 | |
| 63 '4 20 8 4 24 | |
| 64 '5 15 0 0 10 | |
| 65 '6 12 6 0 12 | |
| 66 '7 0 14 0 14 | |
| 67 '8 0 8 0 8 | |
| 68 '9 0 9 0 0 | |
| 69 '10 10 0 10 0 | |
| 70 11-15 26 13 0 12 | |
| 71 16-20 0 0 0 0 | |
| 72 21-50 39 0 0 0 | |
| 73 51-100 0 58 0 0 | |
| 74 101-150 0 0 0 0 | |
| 75 151-200 0 0 0 0 | |
| 76 201-500 0 0 0 0 | |
| 77 501-1000 0 0 0 0 | |
| 78 '1001+ 0 0 0 0 | |
| 79 | |
| 80 Number of genes per-species in orthogroup Percentage of genes Percentage of genes Percentage of genes Percentage of genes | |
| 81 '0 0.0 0.0 0.0 0.0 | |
| 82 '1 47.8 55.4 77.1 59.1 | |
| 83 '2 8.5 8.9 8.4 8.0 | |
| 84 '3 9.1 1.6 3.2 4.5 | |
| 85 '4 2.4 1.0 0.8 3.6 | |
| 86 '5 1.8 0.0 0.0 1.5 | |
| 87 '6 1.5 0.8 0.0 1.8 | |
| 88 '7 0.0 1.8 0.0 2.1 | |
| 89 '8 0.0 1.0 0.0 1.2 | |
| 90 '9 0.0 1.2 0.0 0.0 | |
| 91 '10 1.2 0.0 2.1 0.0 | |
| 92 11-15 3.2 1.7 0.0 1.8 | |
| 93 16-20 0.0 0.0 0.0 0.0 | |
| 94 21-50 4.8 0.0 0.0 0.0 | |
| 95 51-100 0.0 7.6 0.0 0.0 | |
| 96 101-150 0.0 0.0 0.0 0.0 | |
| 97 151-200 0.0 0.0 0.0 0.0 | |
| 98 201-500 0.0 0.0 0.0 0.0 | |
| 99 501-1000 0.0 0.0 0.0 0.0 | |
| 100 '1001+ 0.0 0.0 0.0 0.0 |