Mercurial > repos > iuc > orthofinder_onlygroups
view test-data/results_fromblast/Statistics_Overall.tsv @ 9:b3d25fae5389 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/orthofinder commit 179e3fd2aeb66484e49e6370e9507e24d118f4ea
| author | iuc |
|---|---|
| date | Mon, 15 Jan 2024 10:18:14 +0000 |
| parents | 974d8c28e586 |
| children |
line wrap: on
line source
Number of species 4 Number of genes 2733 Number of genes in orthogroups 2276 Number of unassigned genes 457 Percentage of genes in orthogroups 83.3 Percentage of unassigned genes 16.7 Number of orthogroups 622 Number of species-specific orthogroups 96 Number of genes in species-specific orthogroups 426 Percentage of genes in species-specific orthogroups 15.6 Mean orthogroup size 3.7 Median orthogroup size 4.0 G50 (assigned genes) 4 G50 (all genes) 4 O50 (assigned genes) 221 O50 (all genes) 278 Number of orthogroups with all species present 278 Number of single-copy orthogroups 249 Date 2020-08-14 Orthogroups file Orthogroups.tsv Unassigned genes file Orthogroups_UnassignedGenes.tsv Per-species statistics Statistics_PerSpecies.tsv Overall statistics Statistics_Overall.tsv Orthogroups shared between species Orthogroups_SpeciesOverlaps.tsv Average number of genes per-species in orthogroup Number of orthogroups Percentage of orthogroups Number of genes Percentage of genes <1 285 45.8 672 29.5 '1 322 51.8 1352 59.4 '2 8 1.3 73 3.2 '3 4 0.6 56 2.5 '4 0 0.0 0 0.0 '5 0 0.0 0 0.0 '6 1 0.2 26 1.1 '7 0 0.0 0 0.0 '8 0 0.0 0 0.0 '9 1 0.2 39 1.7 '10 0 0.0 0 0.0 11-15 1 0.2 58 2.5 16-20 0 0.0 0 0.0 21-50 0 0.0 0 0.0 51-100 0 0.0 0 0.0 101-150 0 0.0 0 0.0 151-200 0 0.0 0 0.0 201-500 0 0.0 0 0.0 501-1000 0 0.0 0 0.0 '1001+ 0 0.0 0 0.0 Number of species in orthogroup Number of orthogroups 1 96 2 173 3 75 4 278