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view test-data/inputs/no_fa_ext/ApApomp_trinity @ 9:b3d25fae5389 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/orthofinder commit 179e3fd2aeb66484e49e6370e9507e24d118f4ea
author iuc
date Mon, 15 Jan 2024 10:18:14 +0000
parents 918d141a166b
children
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>Gene.41::Ap101_1/1_1.000_309::g.41::m.41 Gene.41::Ap101_1/1_1.000_309::g.41  ORF type:internal len:104 (+) Ap101_1/1_1.000_309:1-309(+)
VCVCVCARCVCVCATCKLCTWCVPKEKLLKHNGPPIDHNDPTTKQNLGHFISRTIWKLNS
SLSNCNHSPRTHNHSSPSSPGEFKFTVNNEDKGIFVCQIKVEQ
>Gene.42::Ap102_1/1_1.000_382::g.42::m.42 Gene.42::Ap102_1/1_1.000_382::g.42  ORF type:internal len:128 (+) Ap102_1/1_1.000_382:1-381(+)
TDEYDPQRPNDYESYIKMRKDQRQREREEERKRELEEREKRRRERHRDEYDSDEDDEFNR
KRRRSRRDDDDDHRRSSEHKARGAAIAPPQSLIESSKPDPKEVSLPQPENKLTLNTGEYG
GGFSVGK
>Gene.43::Ap108_1/1_1.000_314::g.43::m.43 Gene.43::Ap108_1/1_1.000_314::g.43  ORF type:internal len:105 (+) Ap108_1/1_1.000_314:1-312(+)
LDDMDIFNSPPLGIFSVIRKMPDAAELEKTMSLYDRIQRDLELAEMTYPPQNAFEEWSRW
TKEGKMWIYPVDNEQGMEEEANVGFHEHVFLDHMLEDFPKRGPV
>Gene.7::Ap10_1/1_1.000_338::g.7::m.7 Gene.7::Ap10_1/1_1.000_338::g.7  ORF type:internal len:113 (+) Ap10_1/1_1.000_338:1-336(+)
PYSAAKTTAQAATDDLKRRQEELERKAEELQRKEQELQRNMGHQARVNNFPPLPEKCCVQ
PCFYQDFELDIPLEFQRIVKTVYYVWIAYICLLILNVLGTLAYFIAASKAGH
>Gene.8::Ap11_1/1_1.000_406::g.8::m.8 Gene.8::Ap11_1/1_1.000_406::g.8  ORF type:internal len:136 (+) Ap11_1/1_1.000_406:1-405(+)
EVPSVAVPGVVSTVVQDSAHKIFIGGLPNYLNEDQVKELLTSFGPLKAFNLVKDSATGLS
KGYAFCEYLDPSITDQACAGLNGMQLGDKKLIVQRASVGAKNAQGGPNVLPVQLQIPGLN
MAQVQGPGPTTEVLC
>Gene.9::Ap12_1/1_1.000_582::g.9::m.9 Gene.9::Ap12_1/1_1.000_582::g.9  ORF type:internal len:195 (+) Ap12_1/1_1.000_582:1-582(+)
DGVALFCFLHAFYLVKTQPLLLSLFMFVVVLFCYFLSSRPDTMLSHKHEVIGRFPSMSTY
IYFSPLLVHPSIHSSTCLSSTPFWLLLASAVAVVIVGGGGDVSSVGVDGHSSQRHLSASG
GVGLFRCRSTSCAERHLATRMRYDVARPPLKSPVIGPHTHTHSCNNKTDKTLALLRIQSL
FNRLALVHVTIWGR
>Gene.11::Ap13_1/1_1.000_481::g.11::m.11 Gene.11::Ap13_1/1_1.000_481::g.11  ORF type:internal len:161 (+) Ap13_1/1_1.000_481:1-480(+)
VESRAVKKMSLVDAIRNGLYDQEHGTISDPNTATDMTVLEAINKGLIDTKNIRVNVPGTS
EIISIDSALAENILDPLSGVLSNPATGECVDLLEAEQAGLMFVGVSEEQLKQPDLKQIVT
EGLCDPDSGTIQDPDTGKNMTVIEAMQTGLVDSTAPLLTV
>Gene.13::Ap18_1/1_1.000_318::g.13::m.13 Gene.13::Ap18_1/1_1.000_318::g.13  ORF type:internal len:107 (+) Ap18_1/1_1.000_318:1-318(+)
PACKTPFYFVCQSRSKVTTVVSEKHTDAELVHTLCIRHRSTVAWDILAGERAKFSQPRAE
SVSSASDWRVFGSDRRSIGRVPSIDLCPFSASRRICLHSGRRPSQP
>Gene.14::Ap19_1/1_1.000_302::g.14::m.14 Gene.14::Ap19_1/1_1.000_302::g.14  ORF type:internal len:101 (+) Ap19_1/1_1.000_302:1-300(+)
PAIVQRASGLAMSEIYHLRFCDGDRLNVSCPDNWQIHISSSYFVYVSGVDGRGVRDCRQQ
FNGTSQCLRKIQFYDPTYFGQLIQSCQSKQRCDDGLLAKT
>Gene.15::Ap20_1/1_1.000_780::g.15::m.15 Gene.15::Ap20_1/1_1.000_780::g.15  ORF type:internal len:261 (+) Ap20_1/1_1.000_780:1-780(+)
HEGPVWQVAWAHPMFGNLIASCSYDRKVIIWKETGGTWAKLYEYNNHDSSVNSVCWAPYE
FGLMLACGSSDGSVSVISSTGDGTWDSKKINNAHRIGCNAVSWGPAVQHGALLDPSGSQK
PVKRFVTGGCDNLVKIWKEENDQWIEEQKLDGHCDWVRDVAWAPSIGLPRTVIASCSQDC
QVIIWTNDGSGNWTSKVLHKFNAAVWHVSWSVTGNILAVSGGDNKVSLWKETIEGQWVCV
SDVNKGHGQGQITENKSVVS
>Gene.16::Ap21_1/1_1.000_468::g.16::m.16 Gene.16::Ap21_1/1_1.000_468::g.16  ORF type:internal len:157 (+) Ap21_1/1_1.000_468:1-468(+)
AAIQNAKYIIAQVNPNMPRTFGDGVIHMSHCDAMVQVTDPLPEIHVSKCTEVETKIGKFI
ADNLVHDGATLQMGIGSIPDAVLAQLGEHRDIGIHTEMFSDGVIDLVMKGVITNSKKVIQ
TGKILSSFAFGTKKLYNFMNNNPFVVMCDVAFVNNT
>Gene.18::Ap23_1/1_1.000_307::g.18::m.18 Gene.18::Ap23_1/1_1.000_307::g.18  ORF type:internal len:103 (-) Ap23_1/1_1.000_307:1-306(-)
CVTTIPVITEAVYCVSIKWVPRIIVPGWLTVSMSLYCRKFLSDTCVVSQCHQTFPDVLLI
TSSFLDNLDAEIFSSSFASVRTRPPSLKTNVYFFSTTWLVTL
>Gene.19::Ap32_1/1_1.000_302::g.19::m.19 Gene.19::Ap32_1/1_1.000_302::g.19  ORF type:internal len:101 (+) Ap32_1/1_1.000_302:1-300(+)
FLEEIKIAACDKEKRLSDLGEKVRQLEAQLAQQIKECEMKDFSLQQEMAKCAELTAAIQG
KEATISELSTGLTEKTNQMMMMLNENQQKAEHIEALQTET
>Gene.20::Ap33_1/1_1.000_569::g.20::m.20 Gene.20::Ap33_1/1_1.000_569::g.20  ORF type:internal len:190 (+) Ap33_1/1_1.000_569:1-567(+)
CNSDAPGNIGNHCFHSNVIGTTSHDNITPHQVQNYQYQSPSMTSSMTSSSSLVSSMNNSS
MGSPQVYANQMDSANANSPMSRSYDGGLTYAQYKNQLRPKGGFYSQYSGDHPSSTSSSTE
SLNSKCSVSSNNTSQPSEVTRRPISTSKGHVAQAINRFSQPVTQASNTNNVNRVETGTSS
TGSVSIMPS
>Gene.21::Ap34_1/1_1.000_337::g.21::m.21 Gene.21::Ap34_1/1_1.000_337::g.21  ORF type:internal len:113 (+) Ap34_1/1_1.000_337:1-336(+)
KQLTVCTEGQFKCANHHCISASSVCDKYDDCGDMSDEIGCHKDSSEGCSVNNGGCEQNCT
DLPDKGHVCHCDPGYIVNQDDKTSCSDVDECASWGNKCSQICHNIKGSYKCA
>Gene.22::Ap35_1/1_1.000_319::g.22::m.22 Gene.22::Ap35_1/1_1.000_319::g.22  ORF type:internal len:107 (+) Ap35_1/1_1.000_319:1-318(+)
AEAMMDKIETFNVPRDLSEILAQSYENVKMIVMTQHEVKSERFESKVILLTDCRLIITST
KIPCKEEQSFNLLGIRSLESKTSSRLNFSADGKQWSFMISDTDRID
>Gene.23::Ap36_1/1_1.000_303::g.23::m.23 Gene.23::Ap36_1/1_1.000_303::g.23  ORF type:internal len:102 (+) Ap36_1/1_1.000_303:1-303(+)
GKGIRTVAPPPGVGSARVRRDSALSDEEDVFHEDSKPTSPPAAHSPPKPKEEKILVPAPP
PKENIWEKRKTGSSPSGSGTSQPSETSTELDEHHEPSNEYS
>Gene.1::Ap3_1/1_1.000_546::g.1::m.1 Gene.1::Ap3_1/1_1.000_546::g.1  ORF type:internal len:183 (+) Ap3_1/1_1.000_546:1-546(+)
AMQYTGLLLFCLFALTAAKPAEDLQMLIRALLHEIEEEGELQERGIGAVKYGGTNVGEDY
VEVKVIRNMEEVKADQKSHKPLYSLIYGKGTHDPNSSQHSLTSWTWSQLDKCQNGAEGCF
MIRNLKPNTEYWFQLEVQMWINGAYEYIESRKDVEQIRTKGRQENAPWMSSKSYKPDADI
RT
>Gene.25::Ap43_1/1_1.000_684::g.25::m.25 Gene.25::Ap43_1/1_1.000_684::g.25  ORF type:internal len:229 (+) Ap43_1/1_1.000_684:1-684(+)
PSEVTKLQKTEMTAAQSKKLASGPMEDVGCEHDDSLPKIADGQVGKESVEQGISIMEYDT
EPGSKISHGVPERGRTHTRTSAGNVVESKLELEFNQSLTDMEVAQITDAAEARRKAREAA
RAQRLWHKKMIEEGKDPRVMLKSRSHSSPSPDTYTIVVEGSAEVNTSKDKVVSISPTQVQ
GEEGQFAFHDSKKDIKKKTKKSTESLNEEVEKKKKKKKTISANETGSQ
>Gene.26::Ap48_1/1_1.000_347::g.26::m.26 Gene.26::Ap48_1/1_1.000_347::g.26  ORF type:internal len:116 (+) Ap48_1/1_1.000_347:1-345(+)
YWWLMPTMLYGLLWWRGSQAGYTFSEILCVYGYSLAIYIPISILWVIQISWLQWMLVMIG
MALSGTVLVLTFWPAVSQDDRKISMITMVMIVLFHGLLAIGFVLYFFHVPSHVPT
>Gene.27::Ap50_1/1_1.000_299::g.27::m.27 Gene.27::Ap50_1/1_1.000_299::g.27  ORF type:internal len:100 (+) Ap50_1/1_1.000_299:1-297(+)
EIVYRNYIDISVAVATPKGLVVPVLRDVGNMNYAEIEKGLNELGEKARTGNLAIEDMDGG
TFTISNGGVFGSLLGTPIINPPQSAILGMHGIFDRPVAI
>Gene.28::Ap51_1/1_1.000_363::g.28::m.28 Gene.28::Ap51_1/1_1.000_363::g.28  ORF type:internal len:122 (+) Ap51_1/1_1.000_363:1-363(+)
DKDKFKDLYRWTYKFGLDSEAGQRTLPVDMAISLWQLVFSERQPPILKQWLNFLNVHRNV
RGIPRDTWDMFLNFVEAVGDDLSSYDDTEAWPSLFDDFVEYENDRQNQNVKVDKVERDYY
D
>Gene.29::Ap59_1/1_1.000_402::g.29::m.29 Gene.29::Ap59_1/1_1.000_402::g.29  ORF type:internal len:135 (+) Ap59_1/1_1.000_402:1-402(+)
PRMINIQSTGWLLHRLHEGANINTAGVKDTPIALFCAGSSQHNLHRVLCLFSGCVCRTCS
DHICCVLLMNPEKELVGFGIQNSLALHLCRLTNASLCACVSMHMYFVCICITSVHMYLIY
KAFNLYMLNQQKQI
>Gene.30::Ap67_1/1_1.000_300::g.30::m.30 Gene.30::Ap67_1/1_1.000_300::g.30  ORF type:internal len:101 (+) Ap67_1/1_1.000_300:1-300(+)
RHWTVLGLRLQGDFFGLPRSGKMSEAVNPESTSSILPTITLSTDTDQAWPQLIWIPYVTL
TLILLLLTCLSFMHYHFKNRGKYLDAVYKQNNLTPCPKKY
>Gene.31::Ap68_1/1_1.000_323::g.31::m.31 Gene.31::Ap68_1/1_1.000_323::g.31  ORF type:internal len:108 (+) Ap68_1/1_1.000_323:1-321(+)
GRTRDHQQLLEASKCKPIQYPKPDGVVSFDLLSSVALTGTNHDHDQPPHLTLKDDEVPVA
RNLAIYDGPEERFCPAGVYEFIDTDQGKRLQINAQNCIHCKTCDIKC
>Gene.2::Ap6_1/1_1.000_390::g.2::m.2 Gene.2::Ap6_1/1_1.000_390::g.2  ORF type:internal len:131 (+) Ap6_1/1_1.000_390:1-390(+)
ENVLASHCPVGLSSTRYWQSEMADLPPGDAERGKKIFIQRCAHCHSVEAGGKHKQGPNLH
GFIGRKTGQAPGYTFTEANLKKGIIWDKETLDIYLENPKKYIPGTKMIFPGLKKKADRAD
LIAYLEESTK
>Gene.32::Ap75_1/1_1.000_532::g.32::m.32 Gene.32::Ap75_1/1_1.000_532::g.32  ORF type:internal len:178 (+) Ap75_1/1_1.000_532:1-531(+)
LEAAKKEITSQKERMSEMKGHLSAMAAITSGPEPDDVEVATSDEDFDDTHPELAAMKKSM
HQQEMRYSAALNQICDLQEQVKILQEKLAETQDKESEAQLREEVTKLRNKVMEYEETMKT
LEEDLKTMSQIAGESQGSLNTTQDELIKVTEDLAQLYHLICELNGETPNRVMLEHVQ
>Gene.33::Ap77_1/1_1.000_337::g.33::m.33 Gene.33::Ap77_1/1_1.000_337::g.33  ORF type:internal len:113 (+) Ap77_1/1_1.000_337:1-336(+)
CMAPPHSPMQYTWPFGHLYQCPLDRPIAVSICFLSSSLIPNPVRNTNRCSSFRASSTSFL
STSVSGVFLFNNCLAFSNFSSTTAFIFGFVSWILMSYSIVFARRRRRIFSIS
>Gene.35::Ap78_1/1_1.000_428::g.35::m.35 Gene.35::Ap78_1/1_1.000_428::g.35  ORF type:internal len:143 (+) Ap78_1/1_1.000_428:1-426(+)
VSRSEERRSTLGIITVKTIREPLRPYVIKRVLDPRTGEWISEQQASKEEILFVSRGIYHN
RKTGERMLIAEAIEKKLVEAEYLGDAPEPEVISNTYAVRSVVDLRLKKVITFGEAVRRGI
IDKESGTYRNTLTGETMYVGDA
>Gene.3::Ap7_1/1_1.000_421::g.3::m.3 Gene.3::Ap7_1/1_1.000_421::g.3  ORF type:internal len:141 (+) Ap7_1/1_1.000_421:1-420(+)
FVMNLFDWYSAGYSIIIVAFFEVIAISWIYGLQRFKKDIQMMVGKGRWINASFYYYWYPT
WFIISPALMLYILVTMSMQFAPITYGGSISYPSYADGIGFLMVGLALIYLPVLAMIEYCK
AHGFFSTMQKILRPKPDWGP
>Gene.36::Ap82_1/1_1.000_313::g.36::m.36 Gene.36::Ap82_1/1_1.000_313::g.36  ORF type:internal len:105 (+) Ap82_1/1_1.000_313:1-312(+)
SLLREPASVCASSSRELAETCLRLLLKLDTTYTTTDEAITDLLTVTVCQLRLADGRLSQP
TTTRPCSTDDVVYVPIPTEFFHSYSFEQLVAFYVQSAMTNQMPR
>Gene.37::Ap85_1/1_1.000_386::g.37::m.37 Gene.37::Ap85_1/1_1.000_386::g.37  ORF type:internal len:129 (+) Ap85_1/1_1.000_386:1-384(+)
SPAGRNVSWDRREAWYRDAERPRDYPPLPPPPPEVLRRSRSRSPIAPVAYSPRRSSPLRG
HSPYQRGRSSPPPLPRGRTPPRGRTPPPPRGRTPPPRGHTPLQRGRSPLPHGRSPPRARS
TPPLRATP
>Gene.38::Ap87_1/1_1.000_309::g.38::m.38 Gene.38::Ap87_1/1_1.000_309::g.38  ORF type:internal len:104 (+) Ap87_1/1_1.000_309:1-309(+)
EIPEILDMLPDYRGKRVLELGAGIGRFSGVLAKEAAHLTVVDFMESFVEKNKEINGHHTN
IEFIQADVSKLEVPQKSFDLIFSNWLLMYMSDEELKTFFVNCL
>Gene.39::Ap89_1/1_1.000_302::g.39::m.39 Gene.39::Ap89_1/1_1.000_302::g.39  ORF type:internal len:101 (+) Ap89_1/1_1.000_302:1-300(+)
VYHIKAEREEQGNRFIYHIKTEREDITDDSSDIYDPPPIYVPVKVNSTSHTSPSSSTKIS
IPFESPKGAKSPSAGTSWPKFTPDPERQPKLVLNPGKRRT
>Gene.5::Ap8_1/1_1.000_417::g.5::m.5 Gene.5::Ap8_1/1_1.000_417::g.5  ORF type:internal len:140 (+) Ap8_1/1_1.000_417:1-417(+)
AKTGFNTNNCYSTRFRNTFAYNQREWCSVLLCMTVLLLNMQRKRALPSSHLSINTAWYSG
QGEQEERLIVSTRACSPTHTHTSSHVCTRTRRPKHTNTHTGSRMFIRHSSSSSCHSTRTT
SRLSLGIIFLWANRGPIRQ
>Gene.40::Ap90_1/1_1.000_351::g.40::m.40 Gene.40::Ap90_1/1_1.000_351::g.40  ORF type:internal len:118 (+) Ap90_1/1_1.000_351:1-351(+)
DGALFGASGSSIRINGVDVVLASRLITRRVLPLSADLAVFASLFFYGMFSIFNHFVAVCF
HGNMALILSRRNAADCLSAFMTFNFFILYDSAAYLQYFFVLLFFYLLFFLFISQLIV
>Gene.6::Ap9_1/1_1.000_470::g.6::m.6 Gene.6::Ap9_1/1_1.000_470::g.6  ORF type:internal len:157 (+) Ap9_1/1_1.000_470:1-468(+)
LEEEIEELMHENDDEDGVEVEKSKDKHESVERAEKRGSNKNDVKHDEKDRSKDNKENELG
QIKEVEDMGPSVDRSENEREAVGKGIKSEQEGSGSKANKHQVSPTNQGCSHTTNESEKKE
PSHPRSQSQQDSDDDDGEGETLHEKSSSEGDDEGNQ