Mercurial > repos > iuc > package_muscle_3_8_31
changeset 1:11e44e86927b draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_muscle_3_8_31 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
| author | iuc |
|---|---|
| date | Fri, 17 Jul 2015 10:39:39 -0400 |
| parents | 8f20b47725d8 |
| children | |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/tool_dependencies.xml Wed Oct 30 11:51:55 2013 -0400 +++ b/tool_dependencies.xml Fri Jul 17 10:39:39 2015 -0400 @@ -7,8 +7,8 @@ <actions os="darwin" architecture="x86_64"> <action type="download_by_url">http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_i86darwin64.tar.gz</action> <action type="move_file" rename_to="muscle"> - <source>../muscle3.8.31_i86darwin64</source> - <destination>$INSTALL_DIR/muscle</destination> + <source>muscle3.8.31_i86darwin64</source> + <destination>$INSTALL_DIR</destination> </action> </actions> <!-- Download the binaries for MUSCLE compatible with 32-bit OSX. --> @@ -39,7 +39,7 @@ <actions> <action type="download_by_url" target_filename="muscle3.8.31.tar.gz">http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz</action> <!-- When compiling, need to remove the '-static' linker option from the src/mk file used by src/Makefile --> - <action type="shell_command">sed -i 's/-static//g' src/mk</action> + <action type="shell_command">sed -i.bak -e 's/-static//g' src/mk</action> <action type="shell_command">make -C src/</action> <action type="move_file"> <source>src/muscle</source> @@ -56,7 +56,7 @@ Downloads the precompiled 32bit Linux, 64bit Linux, or Mac OS X MUSCLE binaries, which is faster than performing a local compilation, avoids any issues with build dependencies, and is more reproducible between -installations as there is no variability from the compiler or library +installations as there is no variability from the compiler or library versions. If the download attempt fails, compiling MUSCLE from source is attempted.