Mercurial > repos > iuc > package_ncbi_vdb_2_5_2
comparison tool_dependencies.xml @ 1:17ae6c0040ea draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ncbi_vdb_2_5_2 commit 09fa2b6129e5d156e22b07287b0c3bb61ac41328
| author | iuc |
|---|---|
| date | Tue, 01 Mar 2016 07:08:58 -0500 |
| parents | b980182ad267 |
| children |
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| 0:b980182ad267 | 1:17ae6c0040ea |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="perl" version="5.18.1"> | |
| 4 <repository changeset_revision="03f5951a9855" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | |
| 5 </package> | |
| 6 <package name="libxml2" version="2.9.3"> | |
| 7 <repository changeset_revision="7fc6b62d43e3" name="package_libxml2_2_9_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | |
| 8 </package> | |
| 3 <package name="ngs_sdk" version="1.1.3"> | 9 <package name="ngs_sdk" version="1.1.3"> |
| 4 <repository changeset_revision="1197d3c98375" name="package_ngs_sdk_1_1_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | 10 <repository changeset_revision="1197d3c98375" name="package_ngs_sdk_1_1_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> |
| 5 </package> | 11 </package> |
| 6 <package name="ncbi_vdb" version="2.5.2"> | 12 <package name="ncbi_vdb" version="2.5.2"> |
| 7 <install version="1.0"> | 13 <install version="1.0"> |
| 8 <actions> | 14 <actions> |
| 9 <action target_filename="ncbi-vdb-2.5.2.tar.gz" type="download_by_url">https://github.com/ncbi/ncbi-vdb/archive/2.5.2.tar.gz</action> | 15 <action target_filename="ncbi-vdb-2.5.2.tar.gz" type="download_by_url">https://github.com/ncbi/ncbi-vdb/archive/2.5.2.tar.gz</action> |
| 10 <action type="set_environment_for_install"> | 16 <action type="set_environment_for_install"> |
| 11 <repository changeset_revision="8b3509930a44" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> | 17 <repository changeset_revision="03f5951a9855" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> |
| 12 <package name="perl" version="5.18.1" /> | 18 <package name="perl" version="5.18.1" /> |
| 19 </repository> | |
| 20 <repository changeset_revision="7fc6b62d43e3" name="package_libxml2_2_9_3" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> | |
| 21 <package name="libxml2" version="2.9.3" /> | |
| 13 </repository> | 22 </repository> |
| 14 <repository changeset_revision="1197d3c98375" name="package_ngs_sdk_1_1_3" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> | 23 <repository changeset_revision="1197d3c98375" name="package_ngs_sdk_1_1_3" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> |
| 15 <package name="ngs_sdk" version="1.1.3" /> | 24 <package name="ngs_sdk" version="1.1.3" /> |
| 16 </repository> | 25 </repository> |
| 17 </action> | 26 </action> |
| 18 <action type="autoconf">--with-ngs-sdk-prefix=$NGS_SDK_DIR --build=$INSTALL_DIR</action> | 27 <action type="autoconf">--prefix=$INSTALL_DIR --with-ngs-sdk-prefix=$NGS_SDK_DIR --with-xml2-prefix=$LIBXML2_ROOT_DIR --build=$INSTALL_DIR</action> |
| 19 <action type="move_directory_files"> | 28 <action type="move_directory_files"> |
| 20 <source_directory>.</source_directory> | 29 <source_directory>.</source_directory> |
| 21 <destination_directory>$INSTALL_DIR/</destination_directory> | 30 <destination_directory>$INSTALL_DIR/</destination_directory> |
| 22 </action> | 31 </action> |
| 23 <action type="set_environment"> | 32 <action type="set_environment"> |