annotate tool_dependencies.xml @ 1:ac9f317487a9 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_pandas_0_14 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty

<?xml version="1.0"?>
<tool_dependency>
    <package name="numpy" version="1.7.1">
        <repository changeset_revision="300877695495" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="pandas" version="0.14.1">
        <install version="1.0">
            <actions>
                <action type="download_by_url">https://pypi.python.org/packages/source/p/pandas/pandas-0.14.1.tar.gz</action>
                <action type="set_environment_for_install">
                    <repository changeset_revision="300877695495" name="package_numpy_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                        <package name="numpy" version="1.7.1" />
                    </repository>
                </action>
                <action type="make_directory">$INSTALL_DIR/lib/python</action>
                <action type="shell_command">
                    export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
                    export PATH=$PATH:$PATH_NUMPY &amp;&amp;
                    export PYTHONPATH=$PYTHONPATH:$PYTHONPATH_NUMPY &amp;&amp;
                    python setup.py install --install-lib $INSTALL_DIR/lib/python
                </action>
                <action type="set_environment">
                    <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
                    <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
                    <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
                    <environment_variable action="set_to" name="PYTHONPATH_PANDAS">$INSTALL_DIR/lib/python</environment_variable>
                    <environment_variable action="set_to" name="PANDAS_ROOT_PATH">$INSTALL_DIR/lib/python</environment_variable>
                    </action>
            </actions>
        </install>
        <readme>
            Pandas is an open source, BSD-licensed library providing high-performance, easy-to-use data structures and data analysis tools for the Python programming language.
            The PYTHONPATH for pandas can be accessed through PYTHONPATH_PANDAS.
            http://pandas.pydata.org/
        </readme>
    </package>
</tool_dependency>