Mercurial > repos > iuc > package_python_2_7_pysam_0_8_3
comparison tool_dependencies.xml @ 0:ee642ed79a3b draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
author | iuc |
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date | Fri, 17 Jul 2015 14:26:36 -0400 |
parents | |
children | 7defbb2032a1 |
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-1:000000000000 | 0:ee642ed79a3b |
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1 <?xml version="1.0"?> | |
2 <tool_dependency> | |
3 <package name="python" version="2.7"> | |
4 <repository changeset_revision="997181c8671c" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | |
5 </package> | |
6 <package name="pysam" version="0.8.3"> | |
7 <install version="1.0"> | |
8 <actions> | |
9 <action type="setup_python_environment"> | |
10 <repository changeset_revision="997181c8671c" name="package_python_2_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> | |
11 <package name="python" version="2.7" /> | |
12 </repository> | |
13 <!-- allow downloading and installing an Python package from https://pypi.org/ --> | |
14 <package>https://pypi.python.org/packages/source/p/pysam/pysam-0.8.3.tar.gz</package> | |
15 </action> | |
16 <action type="set_environment"> | |
17 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> | |
18 <environment_variable action="set_to" name="PYTHONPATH_PYSAM">$INSTALL_DIR</environment_variable> | |
19 <environment_variable action="set_to" name="PATH_PYSAM">$INSTALL_DIR/bin</environment_variable> | |
20 <environment_variable action="set_to" name="PYSAM_ROOT_DIR">$INSTALL_DIR</environment_variable> | |
21 </action> | |
22 </actions> | |
23 </install> | |
24 <readme> | |
25 Installation of pysam, pyrex and python are required. The installation can be accessed via PYSAM_PATH. | |
26 </readme> | |
27 </package> | |
28 </tool_dependency> |