Mercurial > repos > iuc > package_python_2_7_pysam_0_8_3
annotate tool_dependencies.xml @ 0:ee642ed79a3b draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
author | iuc |
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date | Fri, 17 Jul 2015 14:26:36 -0400 |
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children | 7defbb2032a1 |
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ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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1 <?xml version="1.0"?> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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2 <tool_dependency> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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3 <package name="python" version="2.7"> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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4 <repository changeset_revision="997181c8671c" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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5 </package> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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6 <package name="pysam" version="0.8.3"> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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7 <install version="1.0"> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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8 <actions> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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9 <action type="setup_python_environment"> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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10 <repository changeset_revision="997181c8671c" name="package_python_2_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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11 <package name="python" version="2.7" /> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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12 </repository> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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13 <!-- allow downloading and installing an Python package from https://pypi.org/ --> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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14 <package>https://pypi.python.org/packages/source/p/pysam/pysam-0.8.3.tar.gz</package> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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15 </action> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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16 <action type="set_environment"> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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17 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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18 <environment_variable action="set_to" name="PYTHONPATH_PYSAM">$INSTALL_DIR</environment_variable> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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19 <environment_variable action="set_to" name="PATH_PYSAM">$INSTALL_DIR/bin</environment_variable> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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20 <environment_variable action="set_to" name="PYSAM_ROOT_DIR">$INSTALL_DIR</environment_variable> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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21 </action> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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22 </actions> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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23 </install> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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24 <readme> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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25 Installation of pysam, pyrex and python are required. The installation can be accessed via PYSAM_PATH. |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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26 </readme> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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27 </package> |
ee642ed79a3b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_pysam_0_8_3 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
iuc
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28 </tool_dependency> |