Mercurial > repos > iuc > package_r_3_1_2

changeset 2:9f2fddb9d6e2 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_r_3_1_2 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
author iuc
date Fri, 17 Jul 2015 10:52:54 -0400
parents 6e0eee4ea4e1
children c987143177d4
files tool_dependencies.xml
diffstat 1 files changed, 13 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Apr 09 11:45:25 2015 -0400
+++ b/tool_dependencies.xml	Fri Jul 17 10:52:54 2015 -0400
@@ -15,8 +15,8 @@
                     </action>
                 </actions>
                 <actions architecture="x86_64" os="darwin">
-                   <action type="download_by_url">http://cran.rstudio.com/src/base/R-3/R-3.1.2.tar.gz</action>
-                   <package name="readline" version="6.2">
+                    <action type="download_by_url">http://cran.rstudio.com/src/base/R-3/R-3.1.2.tar.gz</action>
+                    <package name="readline" version="6.2">
                         <repository name="package_readline_6_2" owner="iuc" prior_installation_required="True" />
                     </package>
                     <package name="libpng" version="1.6.7">
@@ -31,6 +31,9 @@
                     <package name="freetype" version="2.5.2">
                         <repository name="package_freetype_2_5_2" owner="devteam" prior_installation_required="True" />
                     </package>
+                    <package name="ncurses" version="5.9">
+                        <repository name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" />
+                    </package>
                     <action type="set_environment_for_install">
                         <repository name="package_readline_6_2" owner="iuc" prior_installation_required="True" >
                             <package name="readline" version="6.2" />
@@ -47,16 +50,20 @@
                         <repository name="package_freetype_2_5_2" owner="devteam" prior_installation_required="True" >
                             <package name="freetype" version="2.5.2" />
                         </repository>
+                        <repository name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" >
+                            <package name="ncurses" version="5.9" />
+                        </repository>
                     </action>
                     <action type="shell_command"><![CDATA[
-                        export LDFLAGS="-L$PNG_LIBS -L$READLINE_LIB_PATH" &&
+                        export LDFLAGS="-L$PNG_LIBS -L$NCURSES_LIB_PATH -L$READLINE_LIB_PATH" &&
+                        export LDFLAGS="$LDFLAGS -Wl,-rpath,$NCURSES_LIB_PATH" && 
                         export LDFLAGS="$LDFLAGS -Wl,-rpath,$READLINE_LIB_PATH" &&
                         export LDFLAGS="$LDFLAGS -Wl,-rpath,$PIXMAN_LIB_PATH" &&
                         export LDFLAGS="$LDFLAGS -Wl,-rpath,$PNG_LIB_PATH" &&
                         export LDFLAGS="$LDFLAGS -Wl,-rpath,$FREETYPE_LIB_PATH" &&
-                        export CFLAGS="-I$PNG_INCLUDES -I$READLINE_INCLUDE_PATH" &&
-                        export CXXFLAGS="-I$PNG_INCLUDES -I$READLINE_INCLUDE_PATH" &&
-                        export CPPFLAGS="-I$PNG_INCLUDES -I$READLINE_INCLUDE_PATH" &&
+                        export CFLAGS="-I$PNG_INCLUDES -I$NCURSES_INCLUDE_PATH -I$READLINE_INCLUDE_PATH" &&
+                        export CXXFLAGS="-I$PNG_INCLUDES -I$NCURSES_INCLUDE_PATH -I$READLINE_INCLUDE_PATH" &&
+                        export CPPFLAGS="-I$PNG_INCLUDES -I$NCURSES_INCLUDE_PATH -I$READLINE_INCLUDE_PATH" &&
                         ./configure --with-tcltk \
                                     --with-blas \
                                     --with-lapack \