Mercurial > repos > iuc > package_r_edger_3_11_0

changeset 0:8b2965eeb34e draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/packages/package_r_edger_3_11_0 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
author iuc
date Fri, 17 Jul 2015 14:30:27 -0400
parents
children
files tool_dependencies.xml
diffstat 1 files changed, 24 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Fri Jul 17 14:30:27 2015 -0400
@@ -0,0 +1,24 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="R" version="3.1.2">
+        <repository changeset_revision="9f2fddb9d6e2" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="edger" version="3.11.0">
+        <install version="1.0">
+            <actions>
+                <action type="setup_r_environment">
+                    <repository changeset_revision="9f2fddb9d6e2" name="package_r_3_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="R" version="3.1.2" />
+                    </repository>
+                    
+                    <!-- bioarchive.github.io -->
+                    <package>https://bioarchive.galaxyproject.org/limma_3.25.3.tar.gz</package>
+                    <package>https://bioarchive.galaxyproject.org/edgeR_3.11.0.tar.gz</package>
+                </action>
+            </actions>
+        </install>
+        <readme>
+edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
+        </readme>
+    </package>
+</tool_dependency>