Mercurial > repos > iuc > package_r_edger_3_12_0

changeset 0:5c1431123155 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/packages/package_r_edger_3_12_0 commit 77385ec02b79f527348aff01bd83a019e30f5f45
author iuc
date Mon, 25 Apr 2016 09:51:40 -0400
parents
children bb14bf1e4535
files tool_dependencies.xml
diffstat 1 files changed, 26 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Apr 25 09:51:40 2016 -0400
@@ -0,0 +1,26 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="R" version="3.1.2">
+        <repository changeset_revision="4d2fd1413b56" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="bioconductor-edger" version="3.12.0">
+        <install version="1.0">
+            <actions>
+                <action type="setup_r_environment">
+                    <repository changeset_revision="4d2fd1413b56" name="package_r_3_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="R" version="3.1.2" />
+                    </repository>
+                    <package sha256sum="b7661fb61a74df2f4fbd0a9ff8fa35ec8f32f0f6de110653e4883f0bfff136e1">
+                        https://depot.galaxyproject.org/software/limma/limma_3.25.3_src_all.tar.gz
+                    </package>
+                    <package sha256sum="dc0927def56f2960d49a4550709b184f22e004119298af035ce723a26bae6ed8">
+                        https://depot.galaxyproject.org/software/edgeR/edgeR_3.12.0_src_all.tar.gz
+                    </package>
+                </action>
+            </actions>
+        </install>
+        <readme>
+edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
+        </readme>
+    </package>
+</tool_dependency>