Mercurial > repos > iuc > package_tophat_2_0_14
comparison tool_dependencies.xml @ 4:b13271391f95 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_tophat_2_0_14 commit f077faa1ffe22597b4eef5ed1f216a53be3aae7b
| author | iuc |
|---|---|
| date | Fri, 06 Nov 2015 16:30:31 -0500 |
| parents | 536f7bb5616d |
| children |
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| 3:536f7bb5616d | 4:b13271391f95 |
|---|---|
| 8 <action type="move_directory_files"> | 8 <action type="move_directory_files"> |
| 9 <source_directory>.</source_directory> | 9 <source_directory>.</source_directory> |
| 10 <destination_directory>$INSTALL_DIR</destination_directory> | 10 <destination_directory>$INSTALL_DIR</destination_directory> |
| 11 </action> | 11 </action> |
| 12 <action type="shell_command">sed -i.bak 's#/build/dest#$INSTALL_DIR#' $INSTALL_DIR/bin/tophat2</action> | 12 <action type="shell_command">sed -i.bak 's#/build/dest#$INSTALL_DIR#' $INSTALL_DIR/bin/tophat2</action> |
| 13 </actions> | |
| 14 <actions architecture="x86_64" os="darwin"> | |
| 15 <action type="download_by_url">https://ccb.jhu.edu/software/tophat/downloads/tophat-2.0.14.OSX_x86_64.tar.gz</action> | |
| 16 <action type="move_directory_files"> | |
| 17 <source_directory>.</source_directory> | |
| 18 <destination_directory>$INSTALL_DIR</destination_directory> | |
| 19 </action> | |
| 13 </actions> | 20 </actions> |
| 14 <actions> | 21 <actions> |
| 15 <action type="download_by_url">http://ccb.jhu.edu/software/tophat/downloads/tophat-2.0.14.tar.gz</action> | 22 <action type="download_by_url">http://ccb.jhu.edu/software/tophat/downloads/tophat-2.0.14.tar.gz</action> |
| 16 <action type="shell_command">./configure --prefix=$INSTALL_DIR</action> | 23 <action type="shell_command">./configure --prefix=$INSTALL_DIR</action> |
| 17 <action type="make_install" /> | 24 <action type="make_install" /> |