Mercurial > repos > iuc > pairtools_stats

diff test-data/output_dedup_pairs.stats @ 2:6cbca5661205 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/open2c/pairtools commit 162c595b19e442f40be4c2f5434b20b56ade52d4
author iuc
date Tue, 30 Apr 2024 12:02:01 +0000
parents 3c87fa1a3b50
children
line wrap: on
line diff
--- a/test-data/output_dedup_pairs.stats	Tue Apr 16 12:50:25 2024 +0000
+++ b/test-data/output_dedup_pairs.stats	Tue Apr 30 12:02:01 2024 +0000
@@ -28,6 +28,33 @@
 summary/frac_cis_40kb+	0.058823529411764705
 summary/frac_dups	0.011378002528445006
 summary/complexity_naive	34495.88583157276
+summary/dist_freq_convergence/convergence_dist	1333521
+summary/dist_freq_convergence/strands_w_max_convergence_dist	++
+summary/dist_freq_convergence/convergence_rel_diff_threshold	0.05
+summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/++	49
+summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/--	58
+summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/-+	65
+summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/+-	425
+summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist_all_strands	597
+summary/dist_freq_convergence/n_cis_pairs_above_convergence_dist_all_strands	0
+summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/++	0.08207705192629816
+summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/--	0.09715242881072027
+summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/-+	0.10887772194304858
+summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/+-	0.711892797319933
+summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist_all_strands	1.0
+summary/dist_freq_convergence/frac_cis_in_cis_above_convergence_dist_all_strands	0.0
+summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/++	0.061946902654867256
+summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/--	0.07332490518331226
+summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/-+	0.08217446270543616
+summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/+-	0.5372945638432364
+summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist_all_strands	0.754740834386852
+summary/dist_freq_convergence/frac_total_mapped_in_cis_above_convergence_dist_all_strands	0.0
+summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/++	0.06265984654731457
+summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/--	0.0741687979539642
+summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/-+	0.08312020460358056
+summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/+-	0.5434782608695652
+summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist_all_strands	0.7634271099744245
+summary/dist_freq_convergence/frac_total_nodups_in_cis_above_convergence_dist_all_strands	0.0
 chrom_freq/chrIV/chrIV	83
 chrom_freq/chrVII/chrVII	55
 chrom_freq/chrXV/chrXV	53
@@ -133,143 +160,279 @@
 dist_freq/2-3/-+	0
 dist_freq/2-3/--	0
 dist_freq/2-3/++	0
-dist_freq/3-6/+-	0
-dist_freq/3-6/-+	1
-dist_freq/3-6/--	0
-dist_freq/3-6/++	1
-dist_freq/6-10/+-	0
-dist_freq/6-10/-+	0
-dist_freq/6-10/--	0
-dist_freq/6-10/++	0
-dist_freq/10-18/+-	0
-dist_freq/10-18/-+	0
-dist_freq/10-18/--	0
-dist_freq/10-18/++	0
-dist_freq/18-32/+-	0
-dist_freq/18-32/-+	0
-dist_freq/18-32/--	0
-dist_freq/18-32/++	0
-dist_freq/32-56/+-	0
-dist_freq/32-56/-+	0
-dist_freq/32-56/--	0
-dist_freq/32-56/++	0
-dist_freq/56-100/+-	0
-dist_freq/56-100/-+	1
-dist_freq/56-100/--	0
-dist_freq/56-100/++	0
-dist_freq/100-178/+-	7
-dist_freq/100-178/-+	2
-dist_freq/100-178/--	2
-dist_freq/100-178/++	0
-dist_freq/178-316/+-	334
-dist_freq/178-316/-+	9
-dist_freq/178-316/--	1
-dist_freq/178-316/++	0
-dist_freq/316-562/+-	34
-dist_freq/316-562/-+	7
-dist_freq/316-562/--	0
-dist_freq/316-562/++	0
-dist_freq/562-1000/+-	1
-dist_freq/562-1000/-+	11
-dist_freq/562-1000/--	0
-dist_freq/562-1000/++	1
-dist_freq/1000-1778/+-	0
-dist_freq/1000-1778/-+	5
-dist_freq/1000-1778/--	6
-dist_freq/1000-1778/++	1
-dist_freq/1778-3162/+-	5
-dist_freq/1778-3162/-+	7
-dist_freq/1778-3162/--	2
-dist_freq/1778-3162/++	0
-dist_freq/3162-5623/+-	4
-dist_freq/3162-5623/-+	4
-dist_freq/3162-5623/--	6
-dist_freq/3162-5623/++	4
-dist_freq/5623-10000/+-	9
-dist_freq/5623-10000/-+	4
-dist_freq/5623-10000/--	9
-dist_freq/5623-10000/++	5
-dist_freq/10000-17783/+-	7
-dist_freq/10000-17783/-+	4
-dist_freq/10000-17783/--	8
-dist_freq/10000-17783/++	10
-dist_freq/17783-31623/+-	9
-dist_freq/17783-31623/-+	4
-dist_freq/17783-31623/--	8
-dist_freq/17783-31623/++	5
-dist_freq/31623-56234/+-	6
-dist_freq/31623-56234/-+	4
-dist_freq/31623-56234/--	7
-dist_freq/31623-56234/++	10
-dist_freq/56234-100000/+-	2
-dist_freq/56234-100000/-+	1
-dist_freq/56234-100000/--	5
-dist_freq/56234-100000/++	5
-dist_freq/100000-177828/+-	3
-dist_freq/100000-177828/-+	1
-dist_freq/100000-177828/--	1
-dist_freq/100000-177828/++	2
-dist_freq/177828-316228/+-	3
-dist_freq/177828-316228/-+	0
-dist_freq/177828-316228/--	2
-dist_freq/177828-316228/++	3
-dist_freq/316228-562341/+-	0
-dist_freq/316228-562341/-+	0
-dist_freq/316228-562341/--	0
-dist_freq/316228-562341/++	1
-dist_freq/562341-1000000/+-	1
-dist_freq/562341-1000000/-+	0
-dist_freq/562341-1000000/--	0
-dist_freq/562341-1000000/++	1
-dist_freq/1000000-1778279/+-	0
-dist_freq/1000000-1778279/-+	0
-dist_freq/1000000-1778279/--	1
-dist_freq/1000000-1778279/++	0
-dist_freq/1778279-3162278/+-	0
-dist_freq/1778279-3162278/-+	0
-dist_freq/1778279-3162278/--	0
-dist_freq/1778279-3162278/++	0
-dist_freq/3162278-5623413/+-	0
-dist_freq/3162278-5623413/-+	0
-dist_freq/3162278-5623413/--	0
-dist_freq/3162278-5623413/++	0
-dist_freq/5623413-10000000/+-	0
-dist_freq/5623413-10000000/-+	0
-dist_freq/5623413-10000000/--	0
-dist_freq/5623413-10000000/++	0
-dist_freq/10000000-17782794/+-	0
-dist_freq/10000000-17782794/-+	0
-dist_freq/10000000-17782794/--	0
-dist_freq/10000000-17782794/++	0
-dist_freq/17782794-31622777/+-	0
-dist_freq/17782794-31622777/-+	0
-dist_freq/17782794-31622777/--	0
-dist_freq/17782794-31622777/++	0
-dist_freq/31622777-56234133/+-	0
-dist_freq/31622777-56234133/-+	0
-dist_freq/31622777-56234133/--	0
-dist_freq/31622777-56234133/++	0
-dist_freq/56234133-100000000/+-	0
-dist_freq/56234133-100000000/-+	0
-dist_freq/56234133-100000000/--	0
-dist_freq/56234133-100000000/++	0
-dist_freq/100000000-177827941/+-	0
-dist_freq/100000000-177827941/-+	0
-dist_freq/100000000-177827941/--	0
-dist_freq/100000000-177827941/++	0
-dist_freq/177827941-316227766/+-	0
-dist_freq/177827941-316227766/-+	0
-dist_freq/177827941-316227766/--	0
-dist_freq/177827941-316227766/++	0
-dist_freq/316227766-562341325/+-	0
-dist_freq/316227766-562341325/-+	0
-dist_freq/316227766-562341325/--	0
-dist_freq/316227766-562341325/++	0
-dist_freq/562341325-1000000000/+-	0
-dist_freq/562341325-1000000000/-+	0
-dist_freq/562341325-1000000000/--	0
-dist_freq/562341325-1000000000/++	0
-dist_freq/562341325+/+-	0
-dist_freq/562341325+/-+	0
-dist_freq/562341325+/--	0
-dist_freq/562341325+/++	0
+dist_freq/3-4/+-	0
+dist_freq/3-4/-+	0
+dist_freq/3-4/--	0
+dist_freq/3-4/++	0
+dist_freq/4-6/+-	0
+dist_freq/4-6/-+	1
+dist_freq/4-6/--	0
+dist_freq/4-6/++	1
+dist_freq/6-7/+-	0
+dist_freq/6-7/-+	0
+dist_freq/6-7/--	0
+dist_freq/6-7/++	0
+dist_freq/7-10/+-	0
+dist_freq/7-10/-+	0
+dist_freq/7-10/--	0
+dist_freq/7-10/++	0
+dist_freq/10-13/+-	0
+dist_freq/10-13/-+	0
+dist_freq/10-13/--	0
+dist_freq/10-13/++	0
+dist_freq/13-18/+-	0
+dist_freq/13-18/-+	0
+dist_freq/13-18/--	0
+dist_freq/13-18/++	0
+dist_freq/18-24/+-	0
+dist_freq/18-24/-+	0
+dist_freq/18-24/--	0
+dist_freq/18-24/++	0
+dist_freq/24-32/+-	0
+dist_freq/24-32/-+	0
+dist_freq/24-32/--	0
+dist_freq/24-32/++	0
+dist_freq/32-42/+-	0
+dist_freq/32-42/-+	0
+dist_freq/32-42/--	0
+dist_freq/32-42/++	0
+dist_freq/42-56/+-	0
+dist_freq/42-56/-+	0
+dist_freq/42-56/--	0
+dist_freq/42-56/++	0
+dist_freq/56-75/+-	0
+dist_freq/56-75/-+	0
+dist_freq/56-75/--	0
+dist_freq/56-75/++	0
+dist_freq/75-100/+-	0
+dist_freq/75-100/-+	1
+dist_freq/75-100/--	0
+dist_freq/75-100/++	0
+dist_freq/100-133/+-	1
+dist_freq/100-133/-+	0
+dist_freq/100-133/--	1
+dist_freq/100-133/++	0
+dist_freq/133-178/+-	6
+dist_freq/133-178/-+	2
+dist_freq/133-178/--	1
+dist_freq/133-178/++	0
+dist_freq/178-237/+-	116
+dist_freq/178-237/-+	3
+dist_freq/178-237/--	0
+dist_freq/178-237/++	0
+dist_freq/237-316/+-	218
+dist_freq/237-316/-+	6
+dist_freq/237-316/--	1
+dist_freq/237-316/++	0
+dist_freq/316-422/+-	32
+dist_freq/316-422/-+	3
+dist_freq/316-422/--	0
+dist_freq/316-422/++	0
+dist_freq/422-562/+-	2
+dist_freq/422-562/-+	4
+dist_freq/422-562/--	0
+dist_freq/422-562/++	0
+dist_freq/562-750/+-	1
+dist_freq/562-750/-+	3
+dist_freq/562-750/--	0
+dist_freq/562-750/++	0
+dist_freq/750-1000/+-	0
+dist_freq/750-1000/-+	8
+dist_freq/750-1000/--	0
+dist_freq/750-1000/++	1
+dist_freq/1000-1334/+-	0
+dist_freq/1000-1334/-+	1
+dist_freq/1000-1334/--	2
+dist_freq/1000-1334/++	0
+dist_freq/1334-1778/+-	0
+dist_freq/1334-1778/-+	4
+dist_freq/1334-1778/--	4
+dist_freq/1334-1778/++	1
+dist_freq/1778-2371/+-	1
+dist_freq/1778-2371/-+	4
+dist_freq/1778-2371/--	1
+dist_freq/1778-2371/++	0
+dist_freq/2371-3162/+-	4
+dist_freq/2371-3162/-+	3
+dist_freq/2371-3162/--	1
+dist_freq/2371-3162/++	0
+dist_freq/3162-4217/+-	1
+dist_freq/3162-4217/-+	2
+dist_freq/3162-4217/--	3
+dist_freq/3162-4217/++	3
+dist_freq/4217-5623/+-	3
+dist_freq/4217-5623/-+	2
+dist_freq/4217-5623/--	3
+dist_freq/4217-5623/++	1
+dist_freq/5623-7499/+-	6
+dist_freq/5623-7499/-+	2
+dist_freq/5623-7499/--	6
+dist_freq/5623-7499/++	2
+dist_freq/7499-10000/+-	3
+dist_freq/7499-10000/-+	2
+dist_freq/7499-10000/--	3
+dist_freq/7499-10000/++	3
+dist_freq/10000-13335/+-	5
+dist_freq/10000-13335/-+	1
+dist_freq/10000-13335/--	3
+dist_freq/10000-13335/++	6
+dist_freq/13335-17783/+-	2
+dist_freq/13335-17783/-+	3
+dist_freq/13335-17783/--	5
+dist_freq/13335-17783/++	4
+dist_freq/17783-23714/+-	5
+dist_freq/17783-23714/-+	0
+dist_freq/17783-23714/--	4
+dist_freq/17783-23714/++	4
+dist_freq/23714-31623/+-	4
+dist_freq/23714-31623/-+	4
+dist_freq/23714-31623/--	4
+dist_freq/23714-31623/++	1
+dist_freq/31623-42170/+-	4
+dist_freq/31623-42170/-+	2
+dist_freq/31623-42170/--	3
+dist_freq/31623-42170/++	6
+dist_freq/42170-56234/+-	2
+dist_freq/42170-56234/-+	2
+dist_freq/42170-56234/--	4
+dist_freq/42170-56234/++	4
+dist_freq/56234-74989/+-	2
+dist_freq/56234-74989/-+	0
+dist_freq/56234-74989/--	4
+dist_freq/56234-74989/++	2
+dist_freq/74989-100000/+-	0
+dist_freq/74989-100000/-+	1
+dist_freq/74989-100000/--	1
+dist_freq/74989-100000/++	3
+dist_freq/100000-133352/+-	1
+dist_freq/100000-133352/-+	0
+dist_freq/100000-133352/--	0
+dist_freq/100000-133352/++	2
+dist_freq/133352-177828/+-	2
+dist_freq/133352-177828/-+	1
+dist_freq/133352-177828/--	1
+dist_freq/133352-177828/++	0
+dist_freq/177828-237137/+-	2
+dist_freq/177828-237137/-+	0
+dist_freq/177828-237137/--	2
+dist_freq/177828-237137/++	2
+dist_freq/237137-316228/+-	1
+dist_freq/237137-316228/-+	0
+dist_freq/237137-316228/--	0
+dist_freq/237137-316228/++	1
+dist_freq/316228-421697/+-	0
+dist_freq/316228-421697/-+	0
+dist_freq/316228-421697/--	0
+dist_freq/316228-421697/++	0
+dist_freq/421697-562341/+-	0
+dist_freq/421697-562341/-+	0
+dist_freq/421697-562341/--	0
+dist_freq/421697-562341/++	1
+dist_freq/562341-749894/+-	1
+dist_freq/562341-749894/-+	0
+dist_freq/562341-749894/--	0
+dist_freq/562341-749894/++	1
+dist_freq/749894-1000000/+-	0
+dist_freq/749894-1000000/-+	0
+dist_freq/749894-1000000/--	0
+dist_freq/749894-1000000/++	0
+dist_freq/1000000-1333521/+-	0
+dist_freq/1000000-1333521/-+	0
+dist_freq/1000000-1333521/--	1
+dist_freq/1000000-1333521/++	0
+dist_freq/1333521-1778279/+-	0
+dist_freq/1333521-1778279/-+	0
+dist_freq/1333521-1778279/--	0
+dist_freq/1333521-1778279/++	0
+dist_freq/1778279-2371374/+-	0
+dist_freq/1778279-2371374/-+	0
+dist_freq/1778279-2371374/--	0
+dist_freq/1778279-2371374/++	0
+dist_freq/2371374-3162278/+-	0
+dist_freq/2371374-3162278/-+	0
+dist_freq/2371374-3162278/--	0
+dist_freq/2371374-3162278/++	0
+dist_freq/3162278-4216965/+-	0
+dist_freq/3162278-4216965/-+	0
+dist_freq/3162278-4216965/--	0
+dist_freq/3162278-4216965/++	0
+dist_freq/4216965-5623413/+-	0
+dist_freq/4216965-5623413/-+	0
+dist_freq/4216965-5623413/--	0
+dist_freq/4216965-5623413/++	0
+dist_freq/5623413-7498942/+-	0
+dist_freq/5623413-7498942/-+	0
+dist_freq/5623413-7498942/--	0
+dist_freq/5623413-7498942/++	0
+dist_freq/7498942-10000000/+-	0
+dist_freq/7498942-10000000/-+	0
+dist_freq/7498942-10000000/--	0
+dist_freq/7498942-10000000/++	0
+dist_freq/10000000-13335214/+-	0
+dist_freq/10000000-13335214/-+	0
+dist_freq/10000000-13335214/--	0
+dist_freq/10000000-13335214/++	0
+dist_freq/13335214-17782794/+-	0
+dist_freq/13335214-17782794/-+	0
+dist_freq/13335214-17782794/--	0
+dist_freq/13335214-17782794/++	0
+dist_freq/17782794-23713737/+-	0
+dist_freq/17782794-23713737/-+	0
+dist_freq/17782794-23713737/--	0
+dist_freq/17782794-23713737/++	0
+dist_freq/23713737-31622777/+-	0
+dist_freq/23713737-31622777/-+	0
+dist_freq/23713737-31622777/--	0
+dist_freq/23713737-31622777/++	0
+dist_freq/31622777-42169650/+-	0
+dist_freq/31622777-42169650/-+	0
+dist_freq/31622777-42169650/--	0
+dist_freq/31622777-42169650/++	0
+dist_freq/42169650-56234133/+-	0
+dist_freq/42169650-56234133/-+	0
+dist_freq/42169650-56234133/--	0
+dist_freq/42169650-56234133/++	0
+dist_freq/56234133-74989421/+-	0
+dist_freq/56234133-74989421/-+	0
+dist_freq/56234133-74989421/--	0
+dist_freq/56234133-74989421/++	0
+dist_freq/74989421-100000000/+-	0
+dist_freq/74989421-100000000/-+	0
+dist_freq/74989421-100000000/--	0
+dist_freq/74989421-100000000/++	0
+dist_freq/100000000-133352143/+-	0
+dist_freq/100000000-133352143/-+	0
+dist_freq/100000000-133352143/--	0
+dist_freq/100000000-133352143/++	0
+dist_freq/133352143-177827941/+-	0
+dist_freq/133352143-177827941/-+	0
+dist_freq/133352143-177827941/--	0
+dist_freq/133352143-177827941/++	0
+dist_freq/177827941-237137371/+-	0
+dist_freq/177827941-237137371/-+	0
+dist_freq/177827941-237137371/--	0
+dist_freq/177827941-237137371/++	0
+dist_freq/237137371-316227766/+-	0
+dist_freq/237137371-316227766/-+	0
+dist_freq/237137371-316227766/--	0
+dist_freq/237137371-316227766/++	0
+dist_freq/316227766-421696503/+-	0
+dist_freq/316227766-421696503/-+	0
+dist_freq/316227766-421696503/--	0
+dist_freq/316227766-421696503/++	0
+dist_freq/421696503-562341325/+-	0
+dist_freq/421696503-562341325/-+	0
+dist_freq/421696503-562341325/--	0
+dist_freq/421696503-562341325/++	0
+dist_freq/562341325-749894209/+-	0
+dist_freq/562341325-749894209/-+	0
+dist_freq/562341325-749894209/--	0
+dist_freq/562341325-749894209/++	0
+dist_freq/749894209-1000000000/+-	0
+dist_freq/749894209-1000000000/-+	0
+dist_freq/749894209-1000000000/--	0
+dist_freq/749894209-1000000000/++	0
+dist_freq/1000000000+/+-	0
+dist_freq/1000000000+/-+	0
+dist_freq/1000000000+/--	0
+dist_freq/1000000000+/++	0