Mercurial > repos > iuc > plink

changeset 3:57ac42ec1be3 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/plink commit fa78db02447a8f83bd61825eff2d58f449c0280b"
author iuc
date Fri, 25 Sep 2020 17:48:45 +0000
parents 0d43871f45ac
children ac16d24f0d9d
files plink.xml
diffstat 1 files changed, 2 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/plink.xml	Wed Sep 23 19:09:13 2020 +0000
+++ b/plink.xml	Fri Sep 25 17:48:45 2020 +0000
@@ -614,6 +614,7 @@
                     <when value='No'/>
                     <when value='Yes'>
                         <param name='sex_select' type='select' label='Sex select' help='Filter by phenotypes, experiment, and founder state.'>
+                            <option value=''>Do not specifically filter out based on sex or founders</option>
                             <option value='--filter-cases'>Only include cases</option>
                             <option value='--filter-controls'>Only include controls</option>
                             <option value='--filter-males'>Only include males</option>
@@ -622,6 +623,7 @@
                             <option value='--filter-nonfounders'>Only include samples with at least one known parental ID</option>
                         </param>
                         <param name='no_sex_select' type='select' label='No sex settings' optional='true' help='How to deal with ambiguous sex phenotypes'>
+                            <option value=''>Change nothing with regards to ambiguous sex samples</option>
                             <option value='--allow-no-sex'>Prevent samples with ambiguous sex frim having their phenotypes set to missing when analysis commands are run</option>
                             <option value='--must-have-sex'>Force phenotypes of ambiguous-sex samples to missing in output</option>
                         </param>