Mercurial > repos > iuc > psiclass

annotate test-data/test02_meta_annotation.gtf @ 0:1b690aa060f6 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
author iuc
date Tue, 26 Sep 2023 16:51:18 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
1 chr16 PsiCLASS transcript 784996 788300 1000 - . gene_id "chr16.0"; transcript_id "chr16.0.0"; FPKM "80537.900652"; TPM "478698.059272"; cov "29.537275"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
2 chr16 PsiCLASS exon 784996 786377 1000 - . gene_id "chr16.0"; transcript_id "chr16.0.0"; exon_number "1"; FPKM "80537.900652"; TPM "478698.059272"; cov "29.537275"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
3 chr16 PsiCLASS exon 786827 786928 1000 - . gene_id "chr16.0"; transcript_id "chr16.0.0"; exon_number "2"; FPKM "80537.900652"; TPM "478698.059272"; cov "29.537275"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
4 chr16 PsiCLASS exon 787077 787179 1000 - . gene_id "chr16.0"; transcript_id "chr16.0.0"; exon_number "3"; FPKM "80537.900652"; TPM "478698.059272"; cov "29.537275"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
5 chr16 PsiCLASS exon 787354 787477 1000 - . gene_id "chr16.0"; transcript_id "chr16.0.0"; exon_number "4"; FPKM "80537.900652"; TPM "478698.059272"; cov "29.537275"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
6 chr16 PsiCLASS exon 787556 787744 1000 - . gene_id "chr16.0"; transcript_id "chr16.0.0"; exon_number "5"; FPKM "80537.900652"; TPM "478698.059272"; cov "29.537275"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
7 chr16 PsiCLASS exon 788256 788300 1000 - . gene_id "chr16.0"; transcript_id "chr16.0.0"; exon_number "6"; FPKM "80537.900652"; TPM "478698.059272"; cov "29.537275"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
8 chr16 PsiCLASS transcript 789075 798063 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
9 chr16 PsiCLASS exon 789075 789125 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "1"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
10 chr16 PsiCLASS exon 789210 789360 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "2"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
11 chr16 PsiCLASS exon 789547 789715 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "3"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
12 chr16 PsiCLASS exon 790177 790269 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "4"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
13 chr16 PsiCLASS exon 790347 790399 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "5"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
14 chr16 PsiCLASS exon 790525 790666 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "6"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
15 chr16 PsiCLASS exon 791161 791370 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "7"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
16 chr16 PsiCLASS exon 791851 791948 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "8"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
17 chr16 PsiCLASS exon 792224 792347 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "9"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
18 chr16 PsiCLASS exon 792439 792590 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "10"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
19 chr16 PsiCLASS exon 792718 792811 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "11"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
20 chr16 PsiCLASS exon 792966 793064 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "12"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
21 chr16 PsiCLASS exon 793144 793274 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "13"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
22 chr16 PsiCLASS exon 794054 794201 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "14"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
23 chr16 PsiCLASS exon 795132 795356 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "15"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
24 chr16 PsiCLASS exon 795685 795834 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "16"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
25 chr16 PsiCLASS exon 795947 796077 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "17"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
26 chr16 PsiCLASS exon 796717 796861 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "18"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
27 chr16 PsiCLASS exon 796961 797092 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "19"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
28 chr16 PsiCLASS exon 797694 797751 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "20"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
29 chr16 PsiCLASS exon 797839 798063 1000 + . gene_id "chr16.3"; transcript_id "chr16.3.0"; exon_number "21"; FPKM "54415.405737"; TPM "323432.184222"; cov "19.956850"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
30 chr16 PsiCLASS transcript 806296 806764 1000 . . gene_id "chr16.5"; transcript_id "chr16.5.0"; FPKM "10464.766439"; TPM "62200.074061"; cov "3.837953"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
31 chr16 PsiCLASS exon 806296 806764 1000 . . gene_id "chr16.5"; transcript_id "chr16.5.0"; exon_number "1"; FPKM "10464.766439"; TPM "62200.074061"; cov "3.837953"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
32 chr16 PsiCLASS transcript 854556 879737 1000 - . gene_id "chr16.6"; transcript_id "chr16.6.0"; FPKM "14192.358060"; TPM "84355.988981"; cov "5.205047"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
33 chr16 PsiCLASS exon 854556 854706 1000 - . gene_id "chr16.6"; transcript_id "chr16.6.0"; exon_number "1"; FPKM "14192.358060"; TPM "84355.988981"; cov "5.205047"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
34 chr16 PsiCLASS exon 868944 869056 1000 - . gene_id "chr16.6"; transcript_id "chr16.6.0"; exon_number "2"; FPKM "14192.358060"; TPM "84355.988981"; cov "5.205047"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
35 chr16 PsiCLASS exon 869883 870066 1000 - . gene_id "chr16.6"; transcript_id "chr16.6.0"; exon_number "3"; FPKM "14192.358060"; TPM "84355.988981"; cov "5.205047"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
36 chr16 PsiCLASS exon 870729 870882 1000 - . gene_id "chr16.6"; transcript_id "chr16.6.0"; exon_number "4"; FPKM "14192.358060"; TPM "84355.988981"; cov "5.205047"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
37 chr16 PsiCLASS exon 871161 871341 1000 - . gene_id "chr16.6"; transcript_id "chr16.6.0"; exon_number "5"; FPKM "14192.358060"; TPM "84355.988981"; cov "5.205047"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
38 chr16 PsiCLASS exon 879570 879737 1000 - . gene_id "chr16.6"; transcript_id "chr16.6.0"; exon_number "6"; FPKM "14192.358060"; TPM "84355.988981"; cov "5.205047"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
39 chr16 PsiCLASS transcript 954357 970856 1000 - . gene_id "chr16.8"; transcript_id "chr16.8.0"; FPKM "8633.202217"; TPM "51313.693465"; cov "3.166227"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
40 chr16 PsiCLASS exon 954357 954666 1000 - . gene_id "chr16.8"; transcript_id "chr16.8.0"; exon_number "1"; FPKM "8633.202217"; TPM "51313.693465"; cov "3.166227"; sample_cnt "1";
1b690aa060f6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/psiclass commit 2dc6baaeb2d595cbd8d8ffe3bf22b199a0ba23e4
iuc
parents:
diff changeset
41 chr16 PsiCLASS exon 970788 970856 1000 - . gene_id "chr16.8"; transcript_id "chr16.8.0"; exon_number "2"; FPKM "8633.202217"; TPM "51313.693465"; cov "3.166227"; sample_cnt "1";