Mercurial > repos > iuc > quast
annotate test-data/Quast_report.txt @ 3:6fcbee531de6 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit cd130fcce3254cddb9a3f501f43feaa3f37c1b67
author | iuc |
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date | Fri, 29 Sep 2017 05:51:26 -0400 |
parents | 2f581f956e1c |
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736d51130b41
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit d0e7095e03f99c80d6cc8f7a2bfb3c5bef33df09
iuc
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1 All statistics are based on contigs of size >= 500 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs). |
736d51130b41
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit d0e7095e03f99c80d6cc8f7a2bfb3c5bef33df09
iuc
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2 |
2
2f581f956e1c
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 930a43568ac0d4d32dde38a56fbb0b826f8f591b
iuc
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3 Assembly contigs_1_fasta |
1
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
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4 # contigs (>= 0 bp) 3 |
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
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changeset
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5 # contigs (>= 1000 bp) 3 |
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
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0
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changeset
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6 Total length (>= 0 bp) 6710 |
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
parents:
0
diff
changeset
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7 Total length (>= 1000 bp) 6710 |
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
parents:
0
diff
changeset
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8 # contigs 3 |
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
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changeset
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9 Largest contig 3980 |
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
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changeset
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10 Total length 6710 |
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
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changeset
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11 GC (%) 51.28 |
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
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0
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changeset
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12 N50 3980 |
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
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changeset
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13 N75 1610 |
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
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14 L50 1 |
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
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15 L75 2 |
0edbf19cf5eb
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9cf2e1454bf23a11ca0e7eeb26b4eaa446832bf8
iuc
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0
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16 # N's per 100 kbp 0.00 |